Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49888.t1 | XP_003621527.1 | 97.5 | 324 | 8 | 0 | 1 | 324 | 1 | 324 | 4.70E-181 | 643.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49888.t1 | Q93YQ3 | 74.8 | 305 | 77 | 0 | 20 | 324 | 19 | 323 | 4.0e-136 | 485.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49888.t1 | G7KR22 | 97.5 | 324 | 8 | 0 | 1 | 324 | 1 | 324 | 3.4e-181 | 643.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene49888 | 0.822904 | 1.85E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene49888 | 0.833746 | 4.47E-56 | -1.69E-46 |
| MS.gene050099 | MS.gene49888 | 0.8088 | 2.59E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene49888 | 0.801561 | 8.50E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene49888 | 0.873669 | 1.23E-67 | -1.69E-46 |
| MS.gene051860 | MS.gene49888 | 0.831181 | 1.93E-55 | -1.69E-46 |
| MS.gene052178 | MS.gene49888 | 0.810393 | 1.18E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene49888 | 0.833479 | 5.21E-56 | -1.69E-46 |
| MS.gene052207 | MS.gene49888 | 0.853714 | 1.99E-61 | -1.69E-46 |
| MS.gene052310 | MS.gene49888 | 0.812039 | 5.18E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene49888 | 0.804724 | 1.88E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene49888 | 0.85412 | 1.52E-61 | -1.69E-46 |
| MS.gene054011 | MS.gene49888 | 0.805964 | 1.04E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene49888 | 0.802047 | 6.75E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene49888 | 0.807142 | 5.84E-50 | -1.69E-46 |
| MS.gene05455 | MS.gene49888 | 0.800917 | 1.15E-48 | -1.69E-46 |
| MS.gene055277 | MS.gene49888 | 0.82705 | 1.94E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene49888 | 0.830296 | 3.18E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene49888 | 0.854079 | 1.56E-61 | -1.69E-46 |
| MS.gene055428 | MS.gene49888 | 0.821293 | 4.36E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene49888 | 0.837769 | 4.27E-57 | -1.69E-46 |
| MS.gene056314 | MS.gene49888 | 0.920286 | 1.55E-87 | -1.69E-46 |
| MS.gene056407 | MS.gene49888 | 0.806696 | 7.26E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene49888 | 0.811953 | 5.41E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene49888 | 0.802083 | 6.64E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene49888 | 0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene49888 | 0.822813 | 1.94E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene49888 | 0.813199 | 2.89E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene49888 | 0.814677 | 1.36E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene49888 | 0.846294 | 2.38E-59 | -1.69E-46 |
| MS.gene058002 | MS.gene49888 | 0.823184 | 1.59E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene49888 | 0.860757 | 1.65E-63 | -1.69E-46 |
| MS.gene058142 | MS.gene49888 | 0.814131 | 1.80E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene49888 | 0.826323 | 2.89E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene49888 | 0.840112 | 1.06E-57 | -1.69E-46 |
| MS.gene059518 | MS.gene49888 | 0.846497 | 2.09E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene49888 | 0.829079 | 6.29E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene49888 | 0.80913 | 2.20E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene49888 | 0.811538 | 6.66E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene49888 | 0.825755 | 3.94E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene49888 | 0.825033 | 5.84E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene49888 | 0.852195 | 5.41E-61 | -1.69E-46 |
| MS.gene059894 | MS.gene49888 | 0.815301 | 9.92E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene49888 | 0.818873 | 1.56E-52 | -1.69E-46 |
| MS.gene060559 | MS.gene49888 | 0.809535 | 1.80E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene49888 | 0.818602 | 1.80E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44719 | MS.gene49888 | PPI |
| MS.gene021993 | MS.gene49888 | PPI |
| MS.gene056314 | MS.gene49888 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49888.t1 | MTR_7g016670 | 97.531 | 324 | 8 | 0 | 1 | 324 | 1 | 324 | 0.0 | 657 |
| MS.gene49888.t1 | MTR_5g012850 | 74.013 | 304 | 79 | 0 | 21 | 324 | 46 | 349 | 8.72e-174 | 486 |
| MS.gene49888.t1 | MTR_5g012850 | 71.923 | 260 | 73 | 0 | 21 | 280 | 46 | 305 | 2.75e-143 | 407 |
| MS.gene49888.t1 | MTR_5g012850 | 70.513 | 234 | 69 | 0 | 21 | 254 | 46 | 279 | 1.48e-124 | 358 |
| MS.gene49888.t1 | MTR_5g012850 | 71.795 | 195 | 55 | 0 | 21 | 215 | 46 | 240 | 1.58e-105 | 308 |
| MS.gene49888.t1 | MTR_1g007170 | 25.628 | 199 | 135 | 3 | 126 | 314 | 91 | 286 | 1.39e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49888.t1 | AT5G47435 | 77.931 | 290 | 64 | 0 | 35 | 324 | 34 | 323 | 2.63e-177 | 493 |
| MS.gene49888.t1 | AT5G47435 | 77.931 | 290 | 64 | 0 | 35 | 324 | 34 | 323 | 2.63e-177 | 493 |
| MS.gene49888.t1 | AT4G17360 | 71.646 | 328 | 86 | 2 | 4 | 324 | 1 | 328 | 8.49e-175 | 487 |
| MS.gene49888.t1 | AT4G17360 | 67.589 | 253 | 75 | 2 | 4 | 249 | 1 | 253 | 3.53e-123 | 353 |
| MS.gene49888.t1 | AT4G17360 | 67.123 | 219 | 65 | 2 | 4 | 215 | 1 | 219 | 5.12e-103 | 301 |
| MS.gene49888.t1 | AT1G31220 | 25.126 | 199 | 135 | 4 | 126 | 313 | 77 | 272 | 1.64e-15 | 76.3 |
Find 79 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACCATTTGTTCAATTAT+TGG | 0.177833 | 7.4:-83337925 | None:intergenic |
| GAGGCTGGTGTGAAATTAAT+TGG | 0.276061 | 7.4:+83337862 | MS.gene49888:CDS |
| TGTCGTGAGGGTGCCGGCTC+TGG | 0.286577 | 7.4:+83336424 | MS.gene49888:CDS |
| TGGATATCACCTGTGTAATT+AGG | 0.289026 | 7.4:+83336820 | MS.gene49888:CDS |
| TAAAAGAGAAGGGGAGATAT+TGG | 0.293953 | 7.4:+83337031 | MS.gene49888:CDS |
| TAAATATAAAATAGCTGTTC+TGG | 0.311791 | 7.4:+83336451 | MS.gene49888:CDS |
| TGAATGCCTGGGAAAGCTTT+AGG | 0.320422 | 7.4:-83336388 | None:intergenic |
| GTAGCTCCGTATAAAGTTTC+CGG | 0.323146 | 7.4:-83337639 | None:intergenic |
| TTATATGTAAAGATACTTTC+CGG | 0.343633 | 7.4:+83337620 | MS.gene49888:intron |
| TACTTTCCGGAAACTTTATA+CGG | 0.353184 | 7.4:+83337633 | MS.gene49888:CDS |
| TGTATCCGTGGCCATTTAAC+AGG | 0.358909 | 7.4:-83336350 | None:intergenic |
| ACAGTCTTCTTTACCTCATA+AGG | 0.386943 | 7.4:-83339173 | None:intergenic |
| TAGATCCTATTGTGAACTTC+GGG | 0.387384 | 7.4:+83339145 | MS.gene49888:CDS |
| TGTTGGTTAATCCCAATACT+TGG | 0.405487 | 7.4:-83334850 | None:intergenic |
| GTTGTGCTTAAATAATGATA+TGG | 0.416857 | 7.4:-83336999 | None:intergenic |
| TGGTTTGTTGCCATCATTCA+AGG | 0.421574 | 7.4:+83337688 | MS.gene49888:CDS |
| AGAACACCAACCTGTTTAGA+TGG | 0.435601 | 7.4:-83337719 | None:intergenic |
| TTTGCTGCAGGATCACTGCC+TGG | 0.435903 | 7.4:+83336758 | MS.gene49888:intron |
| ATCTTGTTGCATTGAATGCC+TGG | 0.441748 | 7.4:-83336400 | None:intergenic |
| GGGTGGTCATCCATCTAAAC+AGG | 0.442035 | 7.4:+83337709 | MS.gene49888:CDS |
| AGAAGAGTATCCCAAGTATT+GGG | 0.442409 | 7.4:+83334839 | MS.gene49888:CDS |
| CGGACCAATAATTGAACAAA+TGG | 0.444593 | 7.4:+83337921 | MS.gene49888:CDS |
| GTTTCTGATCTTGTTGCTGT+TGG | 0.448833 | 7.4:-83334867 | None:intergenic |
| TGGTAGATCTATTGATTTGA+AGG | 0.453173 | 7.4:-83334894 | None:intergenic |
| TAATACCCGAAGTTCACAAT+AGG | 0.456580 | 7.4:-83339150 | None:intergenic |
| ACTTCGGGTATTACCTTATG+AGG | 0.458749 | 7.4:+83339160 | MS.gene49888:CDS |
| AAGAAGAGTATCCCAAGTAT+TGG | 0.477475 | 7.4:+83334838 | MS.gene49888:CDS |
| CAAACGAAAATAAAAGAGAA+GGG | 0.480930 | 7.4:+83337021 | MS.gene49888:CDS |
| TGCCTGGTTGATTTATTACA+TGG | 0.487484 | 7.4:+83336774 | MS.gene49888:CDS |
| AGTACTTGCAAGATATATGC+AGG | 0.491599 | 7.4:+83337079 | MS.gene49888:CDS |
| ACAATAGGATCTAATAGCCT+TGG | 0.491868 | 7.4:-83339135 | None:intergenic |
| TTAGATCCTATTGTGAACTT+CGG | 0.497060 | 7.4:+83339144 | MS.gene49888:CDS |
| TGATTTATTACATGGATGGC+AGG | 0.506471 | 7.4:+83336782 | MS.gene49888:CDS |
| AGCTGTTCTGGCATCAAAGC+AGG | 0.509131 | 7.4:+83336463 | MS.gene49888:CDS |
| AATGAAAGACGTGGATTCCA+TGG | 0.513588 | 7.4:-83334940 | None:intergenic |
| CTGAGTGATGGTGATGGTAA+TGG | 0.518245 | 7.4:-83334917 | None:intergenic |
| TGGAAAGACATTGTTTCTCA+AGG | 0.521459 | 7.4:-83339115 | None:intergenic |
| GGTTTGTTGCCATCATTCAA+GGG | 0.536094 | 7.4:+83337689 | MS.gene49888:CDS |
| GGATTTCCTAAAGCTTTCCC+AGG | 0.536655 | 7.4:+83336382 | MS.gene49888:CDS |
| AAGATCTGTCGTGAGGGTGC+CGG | 0.545755 | 7.4:+83336418 | MS.gene49888:CDS |
| TTGATCCTGTTAAATGGCCA+CGG | 0.549392 | 7.4:+83336345 | MS.gene49888:CDS |
| ACAAACGAAAATAAAAGAGA+AGG | 0.549972 | 7.4:+83337020 | MS.gene49888:CDS |
| GCAGGATGGAAAACTTCCAC+TGG | 0.561973 | 7.4:+83336800 | MS.gene49888:CDS |
| GGAAACTTTATACGGAGCTA+CGG | 0.562360 | 7.4:+83337641 | MS.gene49888:CDS |
| GTTGGTTAATCCCAATACTT+GGG | 0.570219 | 7.4:-83334849 | None:intergenic |
| TGAGAAACAATGTCTTTCCA+AGG | 0.572364 | 7.4:+83339118 | MS.gene49888:CDS |
| AGATAGAGAGAGAATGGCCA+TGG | 0.572599 | 7.4:+83334811 | None:intergenic |
| GAAACTTTATACGGAGCTAC+GGG | 0.574197 | 7.4:+83337642 | MS.gene49888:CDS |
| TTATTACATGGATGGCAGGA+TGG | 0.577923 | 7.4:+83336786 | MS.gene49888:CDS |
| GAATGTATTGCTTCTAGAGG+TGG | 0.580534 | 7.4:+83335157 | MS.gene49888:CDS |
| TGATGTGAATAGGATGCTGT+TGG | 0.581084 | 7.4:+83335115 | MS.gene49888:intron |
| TGGTTGATTTATTACATGGA+TGG | 0.584316 | 7.4:+83336778 | MS.gene49888:CDS |
| TCCTCCTCCATCTGTATCCG+TGG | 0.584781 | 7.4:-83336362 | None:intergenic |
| AAACGAAAATAAAAGAGAAG+GGG | 0.586824 | 7.4:+83337022 | MS.gene49888:CDS |
| TCTGAATGTATTGCTTCTAG+AGG | 0.589573 | 7.4:+83335154 | MS.gene49888:CDS |
| GAAATTTCACCTAATTACAC+AGG | 0.594096 | 7.4:-83336829 | None:intergenic |
| TTGTTGCCATCATTCAAGGG+TGG | 0.596482 | 7.4:+83337692 | MS.gene49888:CDS |
| GACATAATTAACATTCACCA+TGG | 0.604754 | 7.4:+83337668 | MS.gene49888:CDS |
| AGTGATGGTGATGGTAATGG+TGG | 0.604759 | 7.4:-83334914 | None:intergenic |
| GGATGACCACCCTTGAATGA+TGG | 0.607929 | 7.4:-83337698 | None:intergenic |
| TCTTGTTGCATTGAATGCCT+GGG | 0.613540 | 7.4:-83336399 | None:intergenic |
| TGCAACAAGATCTGTCGTGA+GGG | 0.615842 | 7.4:+83336412 | MS.gene49888:CDS |
| CCATCACCATCACTCAGCCA+TGG | 0.619563 | 7.4:+83334923 | MS.gene49888:CDS |
| TTATATTTAGGATCCAGAGC+CGG | 0.620524 | 7.4:-83336437 | None:intergenic |
| TGGATTCCATGGCTGAGTGA+TGG | 0.622773 | 7.4:-83334929 | None:intergenic |
| GCCACGGATACAGATGGAGG+AGG | 0.625892 | 7.4:+83336361 | MS.gene49888:CDS |
| ATGCAACAAGATCTGTCGTG+AGG | 0.646975 | 7.4:+83336411 | MS.gene49888:CDS |
| ATTACACAGGTGATATCCAG+TGG | 0.647408 | 7.4:-83336816 | None:intergenic |
| GGATACTCTTCTTACCACCA+TGG | 0.658840 | 7.4:-83334828 | None:intergenic |
| TAAATGGCCACGGATACAGA+TGG | 0.659066 | 7.4:+83336355 | MS.gene49888:CDS |
| TAGAGAGAGAATGGCCATGG+TGG | 0.669293 | 7.4:+83334814 | None:intergenic |
| TTTCCAGAAAACGAATCACG+TGG | 0.670975 | 7.4:-83336965 | None:intergenic |
| TGAATGATGGCAACAAACCA+TGG | 0.673075 | 7.4:-83337685 | None:intergenic |
| ATCCATGTAATAAATCAACC+AGG | 0.690814 | 7.4:-83336776 | None:intergenic |
| CCATGGCTGAGTGATGGTGA+TGG | 0.693909 | 7.4:-83334923 | None:intergenic |
| ATGGCCACGGATACAGATGG+AGG | 0.701596 | 7.4:+83336358 | MS.gene49888:CDS |
| TTACAGGGCAATGAAAGACG+TGG | 0.708500 | 7.4:-83334949 | None:intergenic |
| TTCCAGAAAACGAATCACGT+GGG | 0.721846 | 7.4:-83336964 | None:intergenic |
| GTGAGCGAAGAACTTGACAG+CGG | 0.735138 | 7.4:+83337901 | MS.gene49888:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATTATATTATTTAAAG+TGG | + | chr7.4:83338056-83338075 | MS.gene49888:intron | 10.0% |
| !!! | TTTAATATTTTGTATTGTTT+TGG | + | chr7.4:83337830-83337849 | MS.gene49888:intron | 10.0% |
| !! | TAAAACAATATTAAACAATC+AGG | - | chr7.4:83336621-83336640 | None:intergenic | 15.0% |
| !! | TTGAACTTATTCTTAATATT+TGG | + | chr7.4:83337183-83337202 | MS.gene49888:intron | 15.0% |
| !!! | AAATTGAATTTGTGTTTTTT+GGG | + | chr7.4:83335090-83335109 | MS.gene49888:intron | 15.0% |
| !!! | ATTTTTCTTAAGCAAAAATT+GGG | + | chr7.4:83338027-83338046 | MS.gene49888:intron | 15.0% |
| !! | AACACCAATAAATGAATTTA+TGG | + | chr7.4:83336858-83336877 | MS.gene49888:intron | 20.0% |
| !! | CTTAAAAAAAACGTTTGTAT+TGG | - | chr7.4:83335967-83335986 | None:intergenic | 20.0% |
| !! | GAGTACATAAAAATAATAAG+TGG | + | chr7.4:83337332-83337351 | MS.gene49888:intron | 20.0% |
| !! | TAAAAAACATGTTTATTCTG+AGG | - | chr7.4:83335211-83335230 | None:intergenic | 20.0% |
| !! | TAAATATAAAATAGCTGTTC+TGG | + | chr7.4:83336451-83336470 | MS.gene49888:CDS | 20.0% |
| !! | TATATATTCCTAATATGCTT+AGG | - | chr7.4:83338180-83338199 | None:intergenic | 20.0% |
| !! | TTATATGTAAAGATACTTTC+CGG | + | chr7.4:83337620-83337639 | MS.gene49888:intron | 20.0% |
| !!! | AGAACAGCTATTTTATATTT+AGG | - | chr7.4:83336452-83336471 | None:intergenic | 20.0% |
| !!! | ATTTTTCTATACATGTTTCA+TGG | + | chr7.4:83337953-83337972 | MS.gene49888:intron | 20.0% |
| !!! | CTTAATATTTGGATGATTTT+TGG | + | chr7.4:83337194-83337213 | MS.gene49888:intron | 20.0% |
| !!! | GAAATTGAATTTGTGTTTTT+TGG | + | chr7.4:83335089-83335108 | MS.gene49888:intron | 20.0% |
| !!! | GATTTTTCTTAAGCAAAAAT+TGG | + | chr7.4:83338026-83338045 | MS.gene49888:intron | 20.0% |
| !!! | TAAGCTATTTCTATAACAAA+AGG | - | chr7.4:83335759-83335778 | None:intergenic | 20.0% |
| !!! | TCTATTTCTAATTTAGTCTA+TGG | + | chr7.4:83337310-83337329 | MS.gene49888:intron | 20.0% |
| ! | AAACGAAAATAAAAGAGAAG+GGG | + | chr7.4:83337022-83337041 | MS.gene49888:CDS | 25.0% |
| ! | ACAAACGAAAATAAAAGAGA+AGG | + | chr7.4:83337020-83337039 | MS.gene49888:CDS | 25.0% |
| ! | ACAATAGAATGAACAAAAGA+AGG | - | chr7.4:83335246-83335265 | None:intergenic | 25.0% |
| ! | ACATGTAGACAAATGTTAAA+AGG | - | chr7.4:83337811-83337830 | None:intergenic | 25.0% |
| ! | AGACTAAATTAGAAATAGAG+TGG | - | chr7.4:83337309-83337328 | None:intergenic | 25.0% |
| ! | AGAGCCATAAATTCATTTAT+TGG | - | chr7.4:83336865-83336884 | None:intergenic | 25.0% |
| ! | ATTTCCAATAGAAAAAAGCA+TGG | - | chr7.4:83334999-83335018 | None:intergenic | 25.0% |
| ! | CAAACGAAAATAAAAGAGAA+GGG | + | chr7.4:83337021-83337040 | MS.gene49888:CDS | 25.0% |
| ! | CAACTATCTTGAATAGATTA+CGG | - | chr7.4:83335403-83335422 | None:intergenic | 25.0% |
| ! | CATACTATCTTAATCTGTAT+AGG | - | chr7.4:83338673-83338654 | None:intergenic | 25.0% |
| ! | CCTTTATTGAGTTTGAAAAT+GGG | + | chr7.4:83335045-83335064 | MS.gene49888:intron | 25.0% |
| ! | CTATAGCTTATAAGATATCA+TGG | - | chr7.4:83338849-83338868 | None:intergenic | 25.0% |
| ! | GATATATACCTAAGCATATT+AGG | + | chr7.4:83338169-83338188 | MS.gene49888:intron | 25.0% |
| ! | GTTGTGCTTAAATAATGATA+TGG | - | chr7.4:83337002-83337021 | None:intergenic | 25.0% |
| ! | TATGATAAGCAAATGTCATT+TGG | + | chr7.4:83335542-83335561 | MS.gene49888:intron | 25.0% |
| ! | TCAACAAATATCTATCTACA+TGG | - | chr7.4:83336726-83336745 | None:intergenic | 25.0% |
| ! | TTCACCATTTGTTCAATTAT+TGG | - | chr7.4:83337928-83337947 | None:intergenic | 25.0% |
| ! | TTTCTATTGGAAATTCGTAA+AGG | + | chr7.4:83335005-83335024 | MS.gene49888:intron | 25.0% |
| !! | ACCTATAGCTTTTATGAAAA+CGG | + | chr7.4:83335718-83335737 | MS.gene49888:intron | 25.0% |
| !! | ATGATAAGCAAATGTCATTT+GGG | + | chr7.4:83335543-83335562 | MS.gene49888:intron | 25.0% |
| !! | CAAATTTTCATAAGTCTTAG+AGG | - | chr7.4:83337247-83337266 | None:intergenic | 25.0% |
| !! | CCATTTTCAAACTCAATAAA+GGG | - | chr7.4:83335047-83335066 | None:intergenic | 25.0% |
| !! | TAGGACTCAAAATCTATTTT+TGG | - | chr7.4:83338261-83338280 | None:intergenic | 25.0% |
| !!! | AACATGTTTTTTACTCTAGA+AGG | + | chr7.4:83335218-83335237 | MS.gene49888:CDS | 25.0% |
| !!! | ATATTTTGTATTGTTTTGGC+AGG | + | chr7.4:83337834-83337853 | MS.gene49888:intron | 25.0% |
| !!! | TCAGATTAAAAGTACTAAAG+AGG | - | chr7.4:83335839-83335858 | None:intergenic | 25.0% |
| !!! | TCTTTCTTTTAACTATGCAT+TGG | - | chr7.4:83336206-83336225 | None:intergenic | 25.0% |
| !!! | TGTTGATTTGAATTGATCAT+AGG | + | chr7.4:83338145-83338164 | MS.gene49888:intron | 25.0% |
| !!! | TGTTTTCAGCTTATTTTCAT+TGG | + | chr7.4:83335663-83335682 | MS.gene49888:intron | 25.0% |
| !!! | TTATATGAAACTAGCTTTTC+AGG | + | chr7.4:83335460-83335479 | MS.gene49888:intron | 25.0% |
| !!! | TTGTTTTTGATCCTGTTAAA+TGG | + | chr7.4:83336339-83336358 | MS.gene49888:CDS | 25.0% |
| AAACAACTGTGTAACATGAA+AGG | - | chr7.4:83336506-83336525 | None:intergenic | 30.0% | |
| AACATTATCAATGTCCTGAA+GGG | - | chr7.4:83338129-83338148 | None:intergenic | 30.0% | |
| AACTTCCAAGAAACACTTAT+GGG | - | chr7.4:83336089-83336108 | None:intergenic | 30.0% | |
| AGAAATAGAGTGGTAATTGA+GGG | - | chr7.4:83337299-83337318 | None:intergenic | 30.0% | |
| ATCAGAAAGAGCAATAACAA+AGG | - | chr7.4:83337787-83337806 | None:intergenic | 30.0% | |
| ATCCATGTAATAAATCAACC+AGG | - | chr7.4:83336779-83336798 | None:intergenic | 30.0% | |
| ATTGGAAATTCGTAAAGGAA+TGG | + | chr7.4:83335010-83335029 | MS.gene49888:intron | 30.0% | |
| CCCTTTATTGAGTTTGAAAA+TGG | + | chr7.4:83335044-83335063 | MS.gene49888:intron | 30.0% | |
| CTGTCAAATAGTCTAAATTG+TGG | + | chr7.4:83338989-83339008 | MS.gene49888:intron | 30.0% | |
| CTTAAGCAAAAATTGGGAAA+AGG | + | chr7.4:83338033-83338052 | MS.gene49888:intron | 30.0% | |
| CTTGATATATCCTATTCGTA+GGG | + | chr7.4:83338749-83338768 | MS.gene49888:intron | 30.0% | |
| GAAATTTCACCTAATTACAC+AGG | - | chr7.4:83336832-83336851 | None:intergenic | 30.0% | |
| GACATAATTAACATTCACCA+TGG | + | chr7.4:83337668-83337687 | MS.gene49888:CDS | 30.0% | |
| GCTTGATACTATTTATGTGA+GGG | + | chr7.4:83339011-83339030 | MS.gene49888:intron | 30.0% | |
| GTAATTGAGGGACTAATTTA+TGG | - | chr7.4:83337287-83337306 | None:intergenic | 30.0% | |
| GTACTTTACGACTAACATAA+TGG | - | chr7.4:83337377-83337396 | None:intergenic | 30.0% | |
| TAACTTCCAAGAAACACTTA+TGG | - | chr7.4:83336090-83336109 | None:intergenic | 30.0% | |
| TACTTTCCGGAAACTTTATA+CGG | + | chr7.4:83337633-83337652 | MS.gene49888:CDS | 30.0% | |
| TAGAAATAGAGTGGTAATTG+AGG | - | chr7.4:83337300-83337319 | None:intergenic | 30.0% | |
| TATATGTTTCCATGATTCCA+TGG | - | chr7.4:83336533-83336552 | None:intergenic | 30.0% | |
| TCATTCACATCTTATTGCTA+AGG | - | chr7.4:83337999-83338018 | None:intergenic | 30.0% | |
| TCATTCATACTTAACAGCAT+TGG | + | chr7.4:83337596-83337615 | MS.gene49888:intron | 30.0% | |
| TTAGATCCTATTGTGAACTT+CGG | + | chr7.4:83339144-83339163 | MS.gene49888:CDS | 30.0% | |
| ! | ACCGTTTTCATAAAAGCTAT+AGG | - | chr7.4:83335722-83335741 | None:intergenic | 30.0% |
| ! | AGTTTGAAAATGGGTTTCTT+TGG | + | chr7.4:83335054-83335073 | MS.gene49888:intron | 30.0% |
| ! | ATTATTCTTTCTTTTGCTGC+AGG | + | chr7.4:83336746-83336765 | MS.gene49888:intron | 30.0% |
| ! | CAATAACAAAGGCATAAAAG+TGG | - | chr7.4:83337776-83337795 | None:intergenic | 30.0% |
| ! | CCCATTTTCAAACTCAATAA+AGG | - | chr7.4:83335048-83335067 | None:intergenic | 30.0% |
| ! | TAATATCATGCAGTCGATTT+CGG | - | chr7.4:83336684-83336703 | None:intergenic | 30.0% |
| ! | TGGTTGATTTATTACATGGA+TGG | + | chr7.4:83336778-83336797 | MS.gene49888:CDS | 30.0% |
| !! | TGGATGATTTTTGGAAGAAA+TGG | + | chr7.4:83337203-83337222 | MS.gene49888:intron | 30.0% |
| !! | TGGTAGATCTATTGATTTGA+AGG | - | chr7.4:83334897-83334916 | None:intergenic | 30.0% |
| !!! | AAATGGGTTTCTTTGGTTTT+TGG | + | chr7.4:83335061-83335080 | MS.gene49888:intron | 30.0% |
| !!! | CATTCCATGCTTTTTTCTAT+TGG | + | chr7.4:83334992-83335011 | MS.gene49888:intron | 30.0% |
| !!! | CTTATTTTCATTGGTTTTCC+AGG | + | chr7.4:83335672-83335691 | MS.gene49888:intron | 30.0% |
| !!! | GTTTCTTTGGTTTTTGGAAA+TGG | + | chr7.4:83335067-83335086 | MS.gene49888:intron | 30.0% |
| AAGATATCATGGAGAACTTG+TGG | - | chr7.4:83338838-83338857 | None:intergenic | 35.0% | |
| ACAATAGGATCTAATAGCCT+TGG | - | chr7.4:83339138-83339157 | None:intergenic | 35.0% | |
| ACAGTCTTCTTTACCTCATA+AGG | - | chr7.4:83339176-83339195 | None:intergenic | 35.0% | |
| ACATTATCAATGTCCTGAAG+GGG | - | chr7.4:83338128-83338147 | None:intergenic | 35.0% | |
| ACTTCCAAGAAACACTTATG+GGG | - | chr7.4:83336088-83336107 | None:intergenic | 35.0% | |
| AGAAGAACCTATGCATACTA+GGG | - | chr7.4:83338486-83338505 | None:intergenic | 35.0% | |
| AGTACTTGCAAGATATATGC+AGG | + | chr7.4:83337079-83337098 | MS.gene49888:CDS | 35.0% | |
| ATACTTGAGGGACTAAATGA+TGG | + | chr7.4:83337519-83337538 | MS.gene49888:intron | 35.0% | |
| ATCAAGCATTTGCACAATAC+AGG | - | chr7.4:83338735-83338754 | None:intergenic | 35.0% | |
| ATCTTACAATTGTCTCAGAG+GGG | + | chr7.4:83338090-83338109 | MS.gene49888:intron | 35.0% | |
| ATCTTATTGCTAAGGAAGCA+AGG | - | chr7.4:83337991-83338010 | None:intergenic | 35.0% | |
| CAACATTATCAATGTCCTGA+AGG | - | chr7.4:83338130-83338149 | None:intergenic | 35.0% | |
| CATCTTACAATTGTCTCAGA+GGG | + | chr7.4:83338089-83338108 | MS.gene49888:intron | 35.0% | |
| CATTGAGATCAATTGGACAT+CGG | - | chr7.4:83336157-83336176 | None:intergenic | 35.0% | |
| CCAAATAAGACAATCCAAAC+AGG | - | chr7.4:83335569-83335588 | None:intergenic | 35.0% | |
| CGGACCAATAATTGAACAAA+TGG | + | chr7.4:83337921-83337940 | MS.gene49888:CDS | 35.0% | |
| CTATTTATGTGAGGGTAACA+TGG | + | chr7.4:83339019-83339038 | MS.gene49888:intron | 35.0% | |
| GAAACACTTATGGGGAAAAA+TGG | - | chr7.4:83336080-83336099 | None:intergenic | 35.0% | |
| GCTTGATATATCCTATTCGT+AGG | + | chr7.4:83338748-83338767 | MS.gene49888:intron | 35.0% | |
| GGCTTGATACTATTTATGTG+AGG | + | chr7.4:83339010-83339029 | MS.gene49888:intron | 35.0% | |
| GGTAACATTAAGGTCATCTT+TGG | - | chr7.4:83335809-83335828 | None:intergenic | 35.0% | |
| GTTGGTTAATCCCAATACTT+GGG | - | chr7.4:83334852-83334871 | None:intergenic | 35.0% | |
| TAAAAGAGAAGGGGAGATAT+TGG | + | chr7.4:83337031-83337050 | MS.gene49888:CDS | 35.0% | |
| TAAGGGATAATGCAAATGAG+AGG | + | chr7.4:83338591-83338610 | MS.gene49888:intron | 35.0% | |
| TAATACCCGAAGTTCACAAT+AGG | - | chr7.4:83339153-83339172 | None:intergenic | 35.0% | |
| TACACAGTTGTTTACATCCA+TGG | + | chr7.4:83336513-83336532 | MS.gene49888:intron | 35.0% | |
| TAGATCCTATTGTGAACTTC+GGG | + | chr7.4:83339145-83339164 | MS.gene49888:CDS | 35.0% | |
| TCTGAATGTATTGCTTCTAG+AGG | + | chr7.4:83335154-83335173 | MS.gene49888:CDS | 35.0% | |
| TGAGAAACAATGTCTTTCCA+AGG | + | chr7.4:83339118-83339137 | MS.gene49888:CDS | 35.0% | |
| TGATTTATTACATGGATGGC+AGG | + | chr7.4:83336782-83336801 | MS.gene49888:CDS | 35.0% | |
| TGGATATCACCTGTGTAATT+AGG | + | chr7.4:83336820-83336839 | MS.gene49888:CDS | 35.0% | |
| TGTTTACATCCATGGAATCA+TGG | + | chr7.4:83336521-83336540 | MS.gene49888:intron | 35.0% | |
| TTAGATCGGATGACATAGAT+CGG | - | chr7.4:83336589-83336608 | None:intergenic | 35.0% | |
| TTGAATTTGTGTTCTCTGCA+TGG | + | chr7.4:83337113-83337132 | MS.gene49888:intron | 35.0% | |
| ! | CAACATTGATTGTGTTTGCA+TGG | - | chr7.4:83335282-83335301 | None:intergenic | 35.0% |
| ! | CCTGTTTGGATTGTCTTATT+TGG | + | chr7.4:83335566-83335585 | MS.gene49888:intron | 35.0% |
| ! | TCAGGTCAACTGATTTAGAT+CGG | - | chr7.4:83336603-83336622 | None:intergenic | 35.0% |
| ! | TGCCTGGTTGATTTATTACA+TGG | + | chr7.4:83336774-83336793 | MS.gene49888:CDS | 35.0% |
| ! | TGGAAAGACATTGTTTCTCA+AGG | - | chr7.4:83339118-83339137 | None:intergenic | 35.0% |
| ! | TGTTGGTTAATCCCAATACT+TGG | - | chr7.4:83334853-83334872 | None:intergenic | 35.0% |
| ! | TTATATTTAGGATCCAGAGC+CGG | - | chr7.4:83336440-83336459 | None:intergenic | 35.0% |
| ! | TTTTCCCCATAAGTGTTTCT+TGG | + | chr7.4:83336081-83336100 | MS.gene49888:intron | 35.0% |
| !! | AAGAAGAGTATCCCAAGTAT+TGG | + | chr7.4:83334838-83334857 | MS.gene49888:CDS | 35.0% |
| !! | ACTTTTGTTTGATGTGTTGC+TGG | + | chr7.4:83338688-83338707 | MS.gene49888:intron | 35.0% |
| !! | AGAAGAGTATCCCAAGTATT+GGG | + | chr7.4:83334839-83334858 | MS.gene49888:CDS | 35.0% |
| !! | GCCATTGATTCTAGATCAAA+CGG | - | chr7.4:83336662-83336681 | None:intergenic | 35.0% |
| !! | TAAAAGTACTAAAGAGGCAG+AGG | - | chr7.4:83335833-83335852 | None:intergenic | 35.0% |
| !! | TCACTTTTCATAAGCTATCC+TGG | - | chr7.4:83335693-83335712 | None:intergenic | 35.0% |
| !! | TTTTTGGGAGTGATGTGAAT+AGG | + | chr7.4:83335105-83335124 | MS.gene49888:intron | 35.0% |
| AATGAAAGACGTGGATTCCA+TGG | - | chr7.4:83334943-83334962 | None:intergenic | 40.0% | |
| AATTGTCTCAGGTGCCAATT+TGG | + | chr7.4:83338357-83338376 | MS.gene49888:intron | 40.0% | |
| ACCATATATAAGTCGCTAGG+CGG | - | chr7.4:83338558-83338577 | None:intergenic | 40.0% | |
| ACTTCGGGTATTACCTTATG+AGG | + | chr7.4:83339160-83339179 | MS.gene49888:CDS | 40.0% | |
| AGAACACCAACCTGTTTAGA+TGG | - | chr7.4:83337722-83337741 | None:intergenic | 40.0% | |
| ATCTTGTTGCATTGAATGCC+TGG | - | chr7.4:83336403-83336422 | None:intergenic | 40.0% | |
| ATTACACAGGTGATATCCAG+TGG | - | chr7.4:83336819-83336838 | None:intergenic | 40.0% | |
| ATTGTCTCAGGTGCCAATTT+GGG | + | chr7.4:83338358-83338377 | MS.gene49888:intron | 40.0% | |
| CAATTGAACCTAAGACCTTG+AGG | - | chr7.4:83338342-83338361 | None:intergenic | 40.0% | |
| CCTAGCGACTTATATATGGT+GGG | + | chr7.4:83338558-83338577 | MS.gene49888:intron | 40.0% | |
| CTGCTAAGAACGATCTCTAA+GGG | - | chr7.4:83335873-83335892 | None:intergenic | 40.0% | |
| GAAACTTTATACGGAGCTAC+GGG | + | chr7.4:83337642-83337661 | MS.gene49888:CDS | 40.0% | |
| GAATGAGTGAGTGACTTACA+GGG | - | chr7.4:83334967-83334986 | None:intergenic | 40.0% | |
| GAGAAGAACCTATGCATACT+AGG | - | chr7.4:83338487-83338506 | None:intergenic | 40.0% | |
| GAGGCTGGTGTGAAATTAAT+TGG | + | chr7.4:83337862-83337881 | MS.gene49888:CDS | 40.0% | |
| GCACTCACATTGAGATCAAT+TGG | - | chr7.4:83336164-83336183 | None:intergenic | 40.0% | |
| GCATCTTACAATTGTCTCAG+AGG | + | chr7.4:83338088-83338107 | MS.gene49888:intron | 40.0% | |
| GGAAACTTTATACGGAGCTA+CGG | + | chr7.4:83337641-83337660 | MS.gene49888:CDS | 40.0% | |
| GGTTGTATGTCAACTATGGT+GGG | - | chr7.4:83338537-83338556 | None:intergenic | 40.0% | |
| GTAGAGAGAGTGATACTTGA+GGG | + | chr7.4:83337507-83337526 | MS.gene49888:intron | 40.0% | |
| GTAGCTCCGTATAAAGTTTC+CGG | - | chr7.4:83337642-83337661 | None:intergenic | 40.0% | |
| GTCTTAGGTTCAATTGTCTC+AGG | + | chr7.4:83338346-83338365 | MS.gene49888:intron | 40.0% | |
| GTTTCTGATCTTGTTGCTGT+TGG | - | chr7.4:83334870-83334889 | None:intergenic | 40.0% | |
| TCTTGTTGCATTGAATGCCT+GGG | - | chr7.4:83336402-83336421 | None:intergenic | 40.0% | |
| TGAATGAGTGAGTGACTTAC+AGG | - | chr7.4:83334968-83334987 | None:intergenic | 40.0% | |
| TGAATGATGGCAACAAACCA+TGG | - | chr7.4:83337688-83337707 | None:intergenic | 40.0% | |
| TGATGTGAATAGGATGCTGT+TGG | + | chr7.4:83335115-83335134 | MS.gene49888:intron | 40.0% | |
| TGTAGAGAGAGTGATACTTG+AGG | + | chr7.4:83337506-83337525 | MS.gene49888:intron | 40.0% | |
| TTATTACATGGATGGCAGGA+TGG | + | chr7.4:83336786-83336805 | MS.gene49888:CDS | 40.0% | |
| TTCCAGAAAACGAATCACGT+GGG | - | chr7.4:83336967-83336986 | None:intergenic | 40.0% | |
| TTGATCCTGTTAAATGGCCA+CGG | + | chr7.4:83336345-83336364 | MS.gene49888:CDS | 40.0% | |
| TTTCCAGAAAACGAATCACG+TGG | - | chr7.4:83336968-83336987 | None:intergenic | 40.0% | |
| ! | AAATGTCATTTGGGCCTGTT+TGG | + | chr7.4:83335552-83335571 | MS.gene49888:intron | 40.0% |
| ! | CAAAGGCATAAAAGTGGCAA+CGG | - | chr7.4:83337770-83337789 | None:intergenic | 40.0% |
| ! | GAATGTATTGCTTCTAGAGG+TGG | + | chr7.4:83335157-83335176 | MS.gene49888:CDS | 40.0% |
| ! | GCCGTTTGATCTAGAATCAA+TGG | + | chr7.4:83336658-83336677 | MS.gene49888:intron | 40.0% |
| !! | AATCGCTTACTACTTTTCCC+TGG | - | chr7.4:83336251-83336270 | None:intergenic | 40.0% |
| !! | ACGTGATTCGTTTTCTGGAA+AGG | + | chr7.4:83336967-83336986 | MS.gene49888:CDS | 40.0% |
| !! | ATTCGTTTTCTGGAAAGGCA+TGG | + | chr7.4:83336972-83336991 | MS.gene49888:CDS | 40.0% |
| !! | GGTTTGTTGCCATCATTCAA+GGG | + | chr7.4:83337689-83337708 | MS.gene49888:CDS | 40.0% |
| !! | TATATATGGTGGGTTGCATG+AGG | + | chr7.4:83338568-83338587 | MS.gene49888:intron | 40.0% |
| !! | TGGTTTGTTGCCATCATTCA+AGG | + | chr7.4:83337688-83337707 | MS.gene49888:CDS | 40.0% |
| !!! | ATTGTTTTGGCAGGCTTTTG+AGG | + | chr7.4:83337843-83337862 | MS.gene49888:intron | 40.0% |
| !!! | CTATTTTTGGATGCTTGCAC+TGG | - | chr7.4:83338248-83338267 | None:intergenic | 40.0% |
| AAGTACTAAAGAGGCAGAGG+TGG | - | chr7.4:83335830-83335849 | None:intergenic | 45.0% | |
| ACCGCCTAGCGACTTATATA+TGG | + | chr7.4:83338554-83338573 | MS.gene49888:intron | 45.0% | |
| AGAGGAACCTGTGCATACTA+GGG | + | chr7.4:83338609-83338628 | MS.gene49888:intron | 45.0% | |
| AGGCAGAGGTGGTAACATTA+AGG | - | chr7.4:83335819-83335838 | None:intergenic | 45.0% | |
| AGGCGGTTGTATGTCAACTA+TGG | - | chr7.4:83338541-83338560 | None:intergenic | 45.0% | |
| ATGCAACAAGATCTGTCGTG+AGG | + | chr7.4:83336411-83336430 | MS.gene49888:CDS | 45.0% | |
| CATGGCTGAATCTCATTTGC+AGG | + | chr7.4:83339037-83339056 | MS.gene49888:intron | 45.0% | |
| CCCACCATATATAAGTCGCT+AGG | - | chr7.4:83338561-83338580 | None:intergenic | 45.0% | |
| CCTATAGAACCCACTTGTGT+TGG | + | chr7.4:83338277-83338296 | MS.gene49888:intron | 45.0% | |
| CCTATTCGTAGGGTCTGTTT+GGG | + | chr7.4:83338759-83338778 | MS.gene49888:intron | 45.0% | |
| CCTGCTAAGAACGATCTCTA+AGG | - | chr7.4:83335874-83335893 | None:intergenic | 45.0% | |
| CCTTAGAGATCGTTCTTAGC+AGG | + | chr7.4:83335871-83335890 | MS.gene49888:intron | 45.0% | |
| CGGTTGTATGTCAACTATGG+TGG | - | chr7.4:83338538-83338557 | None:intergenic | 45.0% | |
| CTAAACTAGCCCACCCAAAT+TGG | - | chr7.4:83338374-83338393 | None:intergenic | 45.0% | |
| CTAGGGATGGTGCAATTAAG+AGG | - | chr7.4:83338469-83338488 | None:intergenic | 45.0% | |
| CTATACACACTTGCATGCCA+GGG | + | chr7.4:83336231-83336250 | MS.gene49888:intron | 45.0% | |
| GAACCTATGCATACTAGGGA+TGG | - | chr7.4:83338482-83338501 | None:intergenic | 45.0% | |
| GCCTAGCGACTTATATATGG+TGG | + | chr7.4:83338557-83338576 | MS.gene49888:intron | 45.0% | |
| GGATACTCTTCTTACCACCA+TGG | - | chr7.4:83334831-83334850 | None:intergenic | 45.0% | |
| GGATTTCCTAAAGCTTTCCC+AGG | + | chr7.4:83336382-83336401 | MS.gene49888:CDS | 45.0% | |
| GGTCATCCATCTAAACAGGT+TGG | + | chr7.4:83337713-83337732 | MS.gene49888:intron | 45.0% | |
| TAAATGGCCACGGATACAGA+TGG | + | chr7.4:83336355-83336374 | MS.gene49888:CDS | 45.0% | |
| TCCTATTCGTAGGGTCTGTT+TGG | + | chr7.4:83338758-83338777 | MS.gene49888:intron | 45.0% | |
| TCTATACACACTTGCATGCC+AGG | + | chr7.4:83336230-83336249 | MS.gene49888:intron | 45.0% | |
| TGAATGCCTGGGAAAGCTTT+AGG | - | chr7.4:83336391-83336410 | None:intergenic | 45.0% | |
| TGCAACAAGATCTGTCGTGA+GGG | + | chr7.4:83336412-83336431 | MS.gene49888:CDS | 45.0% | |
| TGTATCCGTGGCCATTTAAC+AGG | - | chr7.4:83336353-83336372 | None:intergenic | 45.0% | |
| TTACAGGGCAATGAAAGACG+TGG | - | chr7.4:83334952-83334971 | None:intergenic | 45.0% | |
| TTATCAATGTCCTGAAGGGG+AGG | - | chr7.4:83338125-83338144 | None:intergenic | 45.0% | |
| TTGAACCTAAGACCTTGAGG+AGG | - | chr7.4:83338339-83338358 | None:intergenic | 45.0% | |
| TTGTTGCCATCATTCAAGGG+TGG | + | chr7.4:83337692-83337711 | MS.gene49888:CDS | 45.0% | |
| ! | CCAACACAAGTGGGTTCTAT+AGG | - | chr7.4:83338280-83338299 | None:intergenic | 45.0% |
| ! | GATTTTTACTCCTCCCCTTC+AGG | + | chr7.4:83338112-83338131 | MS.gene49888:intron | 45.0% |
| !! | AGTGATGGTGATGGTAATGG+TGG | - | chr7.4:83334917-83334936 | None:intergenic | 45.0% |
| !! | CTGAGTGATGGTGATGGTAA+TGG | - | chr7.4:83334920-83334939 | None:intergenic | 45.0% |
| !! | GCAGGTACTGACGATCTATT+TGG | + | chr7.4:83335889-83335908 | MS.gene49888:intron | 45.0% |
| AGCTGTTCTGGCATCAAAGC+AGG | + | chr7.4:83336463-83336482 | MS.gene49888:CDS | 50.0% | |
| CCCAAACAGACCCTACGAAT+AGG | - | chr7.4:83338762-83338781 | None:intergenic | 50.0% | |
| CTAGGGGTGGTGCAATTAAG+AGG | + | chr7.4:83338626-83338645 | MS.gene49888:intron | 50.0% | |
| GAGAGGAACCTGTGCATACT+AGG | + | chr7.4:83338608-83338627 | MS.gene49888:intron | 50.0% | |
| GAGGAACCTGTGCATACTAG+GGG | + | chr7.4:83338610-83338629 | MS.gene49888:intron | 50.0% | |
| GCACCATCCCTAGTATGCAT+AGG | + | chr7.4:83338476-83338495 | MS.gene49888:intron | 50.0% | |
| GCAGGATGGAAAACTTCCAC+TGG | + | chr7.4:83336800-83336819 | MS.gene49888:CDS | 50.0% | |
| GGATGACCACCCTTGAATGA+TGG | - | chr7.4:83337701-83337720 | None:intergenic | 50.0% | |
| GGCTGAATCTCATTTGCAGG+TGG | + | chr7.4:83339040-83339059 | MS.gene49888:intron | 50.0% | |
| GGGTGGTCATCCATCTAAAC+AGG | + | chr7.4:83337709-83337728 | MS.gene49888:CDS | 50.0% | |
| GTGAGCGAAGAACTTGACAG+CGG | + | chr7.4:83337901-83337920 | MS.gene49888:CDS | 50.0% | |
| TCTCAGGTGCCAATTTGGGT+GGG | + | chr7.4:83338362-83338381 | MS.gene49888:intron | 50.0% | |
| TGGATTCCATGGCTGAGTGA+TGG | - | chr7.4:83334932-83334951 | None:intergenic | 50.0% | |
| ! | CACCCACGTGATTCGTTTTC+TGG | + | chr7.4:83336962-83336981 | MS.gene49888:CDS | 50.0% |
| !! | ATGGTGGGTTGCATGAGGTA+AGG | + | chr7.4:83338573-83338592 | MS.gene49888:intron | 50.0% |
| !! | ATGGTGGGTTGCATGAGGTA+AGG | - | chr7.4:83338592-83338573 | None:intergenic | 50.0% |
| !! | CAACTATGGTGGGTTGCATG+AGG | - | chr7.4:83338527-83338546 | None:intergenic | 50.0% |
| !! | TGGTGGGTTGCATGAGGTAA+GGG | + | chr7.4:83338574-83338593 | MS.gene49888:intron | 50.0% |
| !! | TGGTGGGTTGCATGAGGTAA+GGG | - | chr7.4:83338593-83338574 | None:intergenic | 50.0% |
| !!! | TTTTGGCAGGCTTTTGAGGC+TGG | + | chr7.4:83337847-83337866 | MS.gene49888:intron | 50.0% |
| ACCACCAGGCCAACACAAGT+GGG | - | chr7.4:83338289-83338308 | None:intergenic | 55.0% | |
| ATGGCCACGGATACAGATGG+AGG | + | chr7.4:83336358-83336377 | MS.gene49888:CDS | 55.0% | |
| CCATCACCATCACTCAGCCA+TGG | + | chr7.4:83334923-83334942 | MS.gene49888:CDS | 55.0% | |
| GAACCTGTGCATACTAGGGG+TGG | + | chr7.4:83338613-83338632 | MS.gene49888:intron | 55.0% | |
| GTCTCAGGTGCCAATTTGGG+TGG | + | chr7.4:83338361-83338380 | MS.gene49888:intron | 55.0% | |
| GTGCTCCTCCTCAAGGTCTT+AGG | + | chr7.4:83338331-83338350 | MS.gene49888:intron | 55.0% | |
| TCCTCCTCCATCTGTATCCG+TGG | - | chr7.4:83336365-83336384 | None:intergenic | 55.0% | |
| TTGGAGTGTGCTCCTCCTCA+AGG | + | chr7.4:83338324-83338343 | MS.gene49888:intron | 55.0% | |
| TTTGCTGCAGGATCACTGCC+TGG | + | chr7.4:83336758-83336777 | MS.gene49888:intron | 55.0% | |
| ! | AAGATCTGTCGTGAGGGTGC+CGG | + | chr7.4:83336418-83336437 | MS.gene49888:CDS | 55.0% |
| ! | AGAACCCACTTGTGTTGGCC+TGG | + | chr7.4:83338282-83338301 | MS.gene49888:intron | 55.0% |
| ! | CCATGGCTGAGTGATGGTGA+TGG | - | chr7.4:83334926-83334945 | None:intergenic | 55.0% |
| ! | TTGAGGAGGAGCACACTCCA+AGG | - | chr7.4:83338325-83338344 | None:intergenic | 55.0% |
| ! | TTGTGTTGGCCTGGTGGTGT+TGG | + | chr7.4:83338291-83338310 | MS.gene49888:intron | 55.0% |
| CACCACCAGGCCAACACAAG+TGG | - | chr7.4:83338290-83338309 | None:intergenic | 60.0% | |
| GACGCAGACGCAGTTACTGC+AGG | - | chr7.4:83336557-83336576 | None:intergenic | 60.0% | |
| GAGCACACTCCAAGGTCCCA+AGG | - | chr7.4:83338317-83338336 | None:intergenic | 60.0% | |
| GCACCACCCCTAGTATGCAC+AGG | - | chr7.4:83338619-83338638 | None:intergenic | 60.0% | |
| GCCACGGATACAGATGGAGG+AGG | + | chr7.4:83336361-83336380 | MS.gene49888:CDS | 60.0% | |
| ! | ACCCACTTGTGTTGGCCTGG+TGG | + | chr7.4:83338285-83338304 | MS.gene49888:intron | 60.0% |
| !! | TGGTGTTGGCCTTGGGACCT+TGG | + | chr7.4:83338305-83338324 | MS.gene49888:intron | 60.0% |
| GTCCCAAGGCCAACACCACC+AGG | - | chr7.4:83338303-83338322 | None:intergenic | 65.0% | |
| !! | GGCCTGGTGGTGTTGGCCTT+GGG | + | chr7.4:83338298-83338317 | MS.gene49888:intron | 65.0% |
| !! | TGGCCTGGTGGTGTTGGCCT+TGG | + | chr7.4:83338297-83338316 | MS.gene49888:intron | 65.0% |
| !! | TGTCGTGAGGGTGCCGGCTC+TGG | + | chr7.4:83336424-83336443 | MS.gene49888:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 83334824 | 83339205 | 83334824 | ID=MS.gene49888 |
| chr7.4 | mRNA | 83334824 | 83339205 | 83334824 | ID=MS.gene49888.t1;Parent=MS.gene49888 |
| chr7.4 | exon | 83334824 | 83334967 | 83334824 | ID=MS.gene49888.t1.exon1;Parent=MS.gene49888.t1 |
| chr7.4 | CDS | 83334824 | 83334967 | 83334824 | ID=cds.MS.gene49888.t1;Parent=MS.gene49888.t1 |
| chr7.4 | exon | 83335127 | 83335239 | 83335127 | ID=MS.gene49888.t1.exon2;Parent=MS.gene49888.t1 |
| chr7.4 | CDS | 83335127 | 83335239 | 83335127 | ID=cds.MS.gene49888.t1;Parent=MS.gene49888.t1 |
| chr7.4 | exon | 83336334 | 83336484 | 83336334 | ID=MS.gene49888.t1.exon3;Parent=MS.gene49888.t1 |
| chr7.4 | CDS | 83336334 | 83336484 | 83336334 | ID=cds.MS.gene49888.t1;Parent=MS.gene49888.t1 |
| chr7.4 | exon | 83336768 | 83336841 | 83336768 | ID=MS.gene49888.t1.exon4;Parent=MS.gene49888.t1 |
| chr7.4 | CDS | 83336768 | 83336841 | 83336768 | ID=cds.MS.gene49888.t1;Parent=MS.gene49888.t1 |
| chr7.4 | exon | 83336941 | 83337100 | 83336941 | ID=MS.gene49888.t1.exon5;Parent=MS.gene49888.t1 |
| chr7.4 | CDS | 83336941 | 83337100 | 83336941 | ID=cds.MS.gene49888.t1;Parent=MS.gene49888.t1 |
| chr7.4 | exon | 83337632 | 83337730 | 83337632 | ID=MS.gene49888.t1.exon6;Parent=MS.gene49888.t1 |
| chr7.4 | CDS | 83337632 | 83337730 | 83337632 | ID=cds.MS.gene49888.t1;Parent=MS.gene49888.t1 |
| chr7.4 | exon | 83337856 | 83337942 | 83337856 | ID=MS.gene49888.t1.exon7;Parent=MS.gene49888.t1 |
| chr7.4 | CDS | 83337856 | 83337942 | 83337856 | ID=cds.MS.gene49888.t1;Parent=MS.gene49888.t1 |
| chr7.4 | exon | 83339059 | 83339205 | 83339059 | ID=MS.gene49888.t1.exon8;Parent=MS.gene49888.t1 |
| chr7.4 | CDS | 83339059 | 83339205 | 83339059 | ID=cds.MS.gene49888.t1;Parent=MS.gene49888.t1 |
| Gene Sequence |
| Protein sequence |
