AlfalfaGEDB | MS.gene51589

M. sativa cultivar XinJiangDaYe / MS.gene51589

KEGG: -
GO: GO:0003674 GO:0003824 GO:0009055 GO:0016491
PFAM: PF02298.20

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51589.t1	AFK38628.1	86.9	183	24	0	5	187	2	184	1.40E-81	312.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51589.t1	Q9SK27	48.6	181	83	4	4	184	8	178	2.0e-39	163.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51589.t1	I3SED6	86.9	183	24	0	5	187	2	184	1.0e-81	312.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049328	MS.gene51589	0.824087	9.76E-54	-1.69E-46
MS.gene049418	MS.gene51589	0.872338	3.43E-67	-1.69E-46
MS.gene049989	MS.gene51589	0.811546	6.63E-51	-1.69E-46
MS.gene050297	MS.gene51589	0.833663	4.69E-56	-1.69E-46
MS.gene050310	MS.gene51589	0.856136	3.94E-62	-1.69E-46
MS.gene050648	MS.gene51589	0.810231	1.28E-50	-1.69E-46
MS.gene050901	MS.gene51589	0.817824	2.70E-52	-1.69E-46
MS.gene05092	MS.gene51589	0.8173	3.54E-52	-1.69E-46
MS.gene051018	MS.gene51589	0.831842	1.33E-55	-1.69E-46
MS.gene051067	MS.gene51589	0.804787	1.83E-49	-1.69E-46
MS.gene051199	MS.gene51589	0.80095	1.13E-48	-1.69E-46
MS.gene051263	MS.gene51589	0.842642	2.28E-58	-1.69E-46
MS.gene051478	MS.gene51589	0.947625	4.67E-106	-1.69E-46
MS.gene05157	MS.gene51589	0.816391	5.66E-52	-1.69E-46
MS.gene051648	MS.gene51589	0.823868	1.10E-53	-1.69E-46
MS.gene051664	MS.gene51589	0.806491	8.02E-50	-1.69E-46
MS.gene051671	MS.gene51589	0.815008	1.15E-51	-1.69E-46
MS.gene051720	MS.gene51589	0.822499	2.29E-53	-1.69E-46
MS.gene052732	MS.gene51589	0.804364	2.24E-49	-1.69E-46
MS.gene053144	MS.gene51589	0.846868	1.66E-59	-1.69E-46
MS.gene053536	MS.gene51589	0.836951	6.92E-57	-1.69E-46
MS.gene053538	MS.gene51589	0.833159	6.26E-56	-1.69E-46
MS.gene053581	MS.gene51589	0.804494	2.10E-49	-1.69E-46
MS.gene054584	MS.gene51589	0.835385	1.73E-56	-1.69E-46
MS.gene054643	MS.gene51589	0.806479	8.06E-50	-1.69E-46
MS.gene055537	MS.gene51589	0.852354	4.88E-61	-1.69E-46
MS.gene055580	MS.gene51589	-0.809397	1.93E-50	-1.69E-46
MS.gene055957	MS.gene51589	0.817085	3.96E-52	-1.69E-46
MS.gene056169	MS.gene51589	0.846102	2.68E-59	-1.69E-46
MS.gene056228	MS.gene51589	0.835489	1.63E-56	-1.69E-46
MS.gene057082	MS.gene51589	0.805466	1.32E-49	-1.69E-46
MS.gene058197	MS.gene51589	0.836753	7.78E-57	-1.69E-46
MS.gene058198	MS.gene51589	0.836518	8.93E-57	-1.69E-46
MS.gene05894	MS.gene51589	0.849304	3.52E-60	-1.69E-46
MS.gene059163	MS.gene51589	0.804012	2.65E-49	-1.69E-46
MS.gene059164	MS.gene51589	0.822598	2.17E-53	-1.69E-46
MS.gene059300	MS.gene51589	0.859135	5.10E-63	-1.69E-46
MS.gene059424	MS.gene51589	0.825247	5.20E-54	-1.69E-46
MS.gene060519	MS.gene51589	0.829389	5.29E-55	-1.69E-46
MS.gene06057	MS.gene51589	0.875731	2.45E-68	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene031754	MS.gene51589	PPI
MS.gene038783	MS.gene51589	PPI
MS.gene065888	MS.gene51589	PPI
MS.gene006553	MS.gene51589	PPI
MS.gene032997	MS.gene51589	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51589.t1	MTR_1g014120	95.187	187	6	1	1	187	1	184	3.36e-109	310
MS.gene51589.t1	MTR_3g105930	64.474	152	47	3	25	176	24	168	3.05e-63	193
MS.gene51589.t1	MTR_7g090170	56.757	148	40	4	25	172	24	147	1.35e-49	157
MS.gene51589.t1	MTR_8g463180	46.281	121	62	2	12	132	8	125	2.33e-35	125
MS.gene51589.t1	MTR_2g079030	42.763	152	83	3	10	161	8	155	2.46e-34	127
MS.gene51589.t1	MTR_4g081100	48.624	109	55	1	24	132	28	135	1.94e-33	119
MS.gene51589.t1	MTR_6g022170	48.182	110	54	2	21	129	26	133	2.84e-31	111
MS.gene51589.t1	MTR_2g090580	37.714	175	89	4	30	187	29	200	9.69e-29	106
MS.gene51589.t1	MTR_2g090575	41.212	165	78	7	11	163	11	168	1.43e-28	109
MS.gene51589.t1	MTR_4g078410	43.846	130	69	3	25	153	22	148	1.43e-28	105
MS.gene51589.t1	MTR_2g101300	39.726	146	75	6	19	162	18	152	4.99e-28	103
MS.gene51589.t1	MTR_4g124280	36.943	157	85	2	32	174	28	184	1.46e-27	103
MS.gene51589.t1	MTR_4g111640	41.176	119	61	4	16	132	24	135	3.03e-26	99.4
MS.gene51589.t1	MTR_8g086360	35.870	184	101	5	7	178	3	181	4.22e-26	99.0
MS.gene51589.t1	MTR_4g077787	36.913	149	81	5	1	143	1	142	6.03e-26	98.6
MS.gene51589.t1	MTR_2g083250	40.909	110	62	3	25	132	23	131	4.24e-25	98.2
MS.gene51589.t1	MTR_8g094990	37.278	169	90	4	12	167	8	173	5.41e-25	98.2
MS.gene51589.t1	MTR_4g130780	37.302	126	77	1	5	128	4	129	1.26e-23	92.4
MS.gene51589.t1	MTR_8g095013	43.220	118	62	3	11	128	11	123	1.53e-23	94.7
MS.gene51589.t1	MTR_4g130800	39.062	128	72	3	7	129	4	130	1.67e-23	94.4
MS.gene51589.t1	MTR_4g130800	43.119	109	60	2	22	129	22	129	6.65e-23	92.8
MS.gene51589.t1	MTR_4g112310	44.706	85	45	1	48	132	3	85	1.27e-22	88.6
MS.gene51589.t1	MTR_2g088990	37.342	158	89	5	12	168	8	156	1.41e-22	90.9
MS.gene51589.t1	MTR_5g006040	26.705	176	121	3	12	187	11	178	1.79e-21	87.0
MS.gene51589.t1	MTR_1g077790	38.776	98	59	1	32	128	32	129	2.26e-21	87.0
MS.gene51589.t1	MTR_8g095020	39.844	128	64	5	30	148	27	150	1.31e-20	87.4
MS.gene51589.t1	MTR_3g092170	34.591	159	86	3	12	163	8	155	1.80e-20	86.3
MS.gene51589.t1	MTR_4g114870	32.738	168	92	2	32	178	194	361	1.25e-19	85.1
MS.gene51589.t1	MTR_4g114870	31.852	135	89	2	12	146	13	144	1.79e-17	79.3
MS.gene51589.t1	MTR_1g104800	35.833	120	75	1	49	166	43	162	2.49e-18	78.6
MS.gene51589.t1	MTR_6g080660	34.211	114	68	3	17	130	18	124	3.16e-17	76.3
MS.gene51589.t1	MTR_0334s0010	38.333	120	63	4	17	128	9	125	3.21e-17	76.3
MS.gene51589.t1	MTR_4g114830	34.375	96	61	2	25	118	25	120	9.61e-17	73.9
MS.gene51589.t1	MTR_6g083240	33.083	133	81	4	37	165	35	163	1.04e-16	74.3
MS.gene51589.t1	MTR_8g099220	33.333	120	75	2	13	128	9	127	1.65e-16	72.4
MS.gene51589.t1	MTR_8g007020	35.938	128	73	4	5	130	2	122	2.73e-15	70.9
MS.gene51589.t1	MTR_1g090190	30.968	155	94	6	32	184	26	169	3.67e-15	70.1
MS.gene51589.t1	MTR_8g007035	35.938	128	73	4	5	130	2	122	9.36e-15	69.7
MS.gene51589.t1	MTR_4g067200	27.869	122	77	3	17	128	9	129	1.20e-14	68.6
MS.gene51589.t1	MTR_4g066110	27.869	122	77	3	17	128	9	129	1.20e-14	68.6
MS.gene51589.t1	MTR_7g086100	33.333	126	75	3	13	134	7	127	3.01e-14	68.9
MS.gene51589.t1	MTR_2g025580	33.621	116	63	2	50	164	44	146	4.41e-14	67.0
MS.gene51589.t1	MTR_6g023760	37.755	98	55	4	32	128	29	121	8.26e-14	66.6
MS.gene51589.t1	MTR_7g086090	33.884	121	71	3	12	128	6	121	3.74e-13	65.9
MS.gene51589.t1	MTR_7g086280	30.952	126	78	3	13	134	7	127	1.03e-12	63.5
MS.gene51589.t1	MTR_7g086230	30.159	126	79	3	13	134	7	127	2.81e-12	62.4
MS.gene51589.t1	MTR_3g099540	38.272	81	49	1	48	128	42	121	5.08e-12	60.8
MS.gene51589.t1	MTR_3g099580	39.506	81	48	1	48	128	41	120	7.23e-12	61.6
MS.gene51589.t1	MTR_8g089110	31.897	116	75	2	11	126	7	118	7.33e-12	60.1
MS.gene51589.t1	MTR_1g090420	27.152	151	104	3	15	161	15	163	8.15e-12	62.0
MS.gene51589.t1	MTR_6g013420	31.343	134	77	5	7	131	10	137	1.01e-11	60.8
MS.gene51589.t1	MTR_3g099570	38.272	81	49	1	48	128	41	120	1.66e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51589.t1	AT4G31840	49.432	176	78	3	12	187	11	175	1.66e-56	176
MS.gene51589.t1	AT2G25060	49.714	175	76	5	11	184	15	178	4.37e-54	170
MS.gene51589.t1	AT5G25090	52.459	122	58	0	11	132	9	130	2.72e-46	150
MS.gene51589.t1	AT4G30590	52.800	125	55	1	12	132	8	132	1.40e-44	146
MS.gene51589.t1	AT5G57920	44.079	152	82	3	26	177	53	201	1.95e-43	144
MS.gene51589.t1	AT5G57920	44.079	152	82	3	26	177	20	168	2.04e-43	143
MS.gene51589.t1	AT5G57920	44.079	152	82	3	26	177	21	169	2.08e-43	143
MS.gene51589.t1	AT2G23990	51.064	141	56	3	14	150	10	141	4.43e-41	138
MS.gene51589.t1	AT2G23990	45.000	160	56	4	14	150	10	160	2.12e-36	126
MS.gene51589.t1	AT3G20570	40.491	163	83	5	12	164	15	173	9.00e-35	122
MS.gene51589.t1	AT5G14345	57.143	91	37	1	40	130	28	116	1.04e-30	109
MS.gene51589.t1	AT5G53870	40.252	159	84	5	10	161	9	163	5.09e-30	113
MS.gene51589.t1	AT5G53870	40.252	159	84	5	10	161	9	163	6.56e-30	113
MS.gene51589.t1	AT3G18590	45.833	120	59	4	12	129	12	127	2.34e-28	105
MS.gene51589.t1	AT4G28365	38.889	162	90	6	13	168	11	169	5.33e-28	104
MS.gene51589.t1	AT4G27520	43.802	121	64	3	12	132	16	132	1.57e-27	106
MS.gene51589.t1	AT4G32490	34.286	175	86	5	13	166	11	177	1.81e-24	95.9
MS.gene51589.t1	AT1G48940	38.095	126	70	3	13	132	6	129	2.44e-24	94.4
MS.gene51589.t1	AT1G79800	34.459	148	85	4	8	147	8	151	1.13e-21	87.8
MS.gene51589.t1	AT2G31050	36.296	135	80	3	11	145	12	140	2.79e-21	87.0
MS.gene51589.t1	AT1G64640	35.043	117	75	1	32	148	36	151	1.27e-20	85.1
MS.gene51589.t1	AT2G26720	33.094	139	85	3	11	149	12	142	3.74e-19	81.3
MS.gene51589.t1	AT2G32300	35.714	140	74	5	25	160	23	150	6.26e-19	82.0
MS.gene51589.t1	AT2G32300	35.714	140	74	5	25	160	53	180	2.16e-18	80.9
MS.gene51589.t1	AT5G20230	34.426	122	76	3	26	145	23	142	6.28e-17	75.5
MS.gene51589.t1	AT5G26330	36.250	80	51	0	50	129	43	122	1.44e-15	71.6
MS.gene51589.t1	AT5G07475	28.022	182	118	6	12	187	10	184	8.41e-15	69.7
MS.gene51589.t1	AT1G72230	31.967	122	72	2	48	159	38	158	8.87e-14	66.6
MS.gene51589.t1	AT3G60270	35.354	99	59	2	32	130	29	122	1.35e-13	66.2
MS.gene51589.t1	AT3G27200	29.839	124	76	3	11	129	5	122	9.90e-13	63.5
MS.gene51589.t1	AT1G45063	31.933	119	75	3	12	129	14	127	5.53e-12	63.2
MS.gene51589.t1	AT1G45063	31.933	119	75	3	12	129	14	127	8.44e-12	63.2
MS.gene51589.t1	AT1G22480	41.333	75	43	1	56	130	42	115	4.20e-11	59.3

Find 44 sgRNAs with CRISPR-Local

Find 65 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCATCATCTTGTTCTCTTT+TGG	0.177913	1.3:+8221697	MS.gene51589:CDS
CTGTGGTTGTCATGAGTCTA+AGG	0.276529	1.3:+8222432	MS.gene51589:CDS
CCCATCATTGTAGTGTTTGA+TGG	0.297797	1.3:-8222324	None:intergenic
TCTCCACTGATGTAGTAGTA+TGG	0.331847	1.3:-8222377	None:intergenic
AAAGTGAGATTTGATCATTC+TGG	0.347650	1.3:+8222353	MS.gene51589:CDS
AATCTGATTCTCTCAACAAA+TGG	0.402045	1.3:+8221807	MS.gene51589:CDS
GGAGCAACAGCTGAGCCAGC+TGG	0.404423	1.3:-8222515	None:intergenic
CTACTACATCAGTGGAGAAA+AGG	0.404851	1.3:+8222382	MS.gene51589:CDS
CCCATCAAACACTACAATGA+TGG	0.417208	1.3:+8222323	MS.gene51589:CDS
CCATCATTGTAGTGTTTGAT+GGG	0.419117	1.3:-8222323	None:intergenic
AAATGTGAAAATTACTTAGA+TGG	0.419539	1.3:-8221859	None:intergenic
TGCATGGAAGGTTCCTTCTT+CGG	0.420616	1.3:+8221784	MS.gene51589:CDS
TACTTAGATGGTCTCCAACT+TGG	0.420901	1.3:-8221847	None:intergenic
CCTTCACCAGCTGAAGTTGA+TGG	0.422615	1.3:+8222491	MS.gene51589:CDS
GCAAGGTGGTGGTGTATTTG+TGG	0.435276	1.3:+8222565	MS.gene51589:CDS
AAAACAGTTGCACCACTTGT+TGG	0.440200	1.3:-8222542	None:intergenic
GCAGCTAAGGATATCTTGCT+TGG	0.450579	1.3:+8221749	MS.gene51589:CDS
TACTACATCAGTGGAGAAAA+GGG	0.477152	1.3:+8222383	MS.gene51589:CDS
ATCTGATTCTCTCAACAAAT+GGG	0.481996	1.3:+8221808	MS.gene51589:CDS
TGTGGTTGTCATGAGTCTAA+GGG	0.500303	1.3:+8222433	MS.gene51589:CDS
GTTGCACCACTTGTTGGAGC+TGG	0.502974	1.3:-8222536	None:intergenic
TCAAGTGTTCGTTTCCAAGT+TGG	0.513908	1.3:+8221833	MS.gene51589:CDS
AGAGAATCAGATTCCGAAGA+AGG	0.516269	1.3:-8221797	None:intergenic
ACTTCAGCTGGTGAAGGTGC+TGG	0.517037	1.3:-8222485	None:intergenic
CCATCAAACACTACAATGAT+GGG	0.517725	1.3:+8222324	MS.gene51589:CDS
GCTGAAGTTGATGGTCCAGC+TGG	0.527675	1.3:+8222500	MS.gene51589:CDS
GCTGGACCATCAACTTCAGC+TGG	0.530028	1.3:-8222497	None:intergenic
TCAGTTTGGAAATATGAAGC+TGG	0.536642	1.3:+8222242	MS.gene51589:intron
GAAAAGGGTCATTGTGAGAA+GGG	0.553149	1.3:+8222398	MS.gene51589:CDS
GTGGTTGTCATGAGTCTAAG+GGG	0.573266	1.3:+8222434	MS.gene51589:CDS
CCATCAACTTCAGCTGGTGA+AGG	0.581807	1.3:-8222491	None:intergenic
GGTGGTGTATTTGTGGCTGT+AGG	0.582095	1.3:+8222572	MS.gene51589:CDS
AGAAAAGGGTCATTGTGAGA+AGG	0.594361	1.3:+8222397	MS.gene51589:CDS
GTTGCTCCAGCTCCAACAAG+TGG	0.607631	1.3:+8222530	MS.gene51589:CDS
GCTAAGGATATCTTGCTTGG+TGG	0.617121	1.3:+8221752	MS.gene51589:CDS
GGTCCATACTACTACATCAG+TGG	0.620422	1.3:+8222374	MS.gene51589:CDS
TGGCAAAACTGATGCATGGA+AGG	0.623442	1.3:+8221772	MS.gene51589:CDS
TGGTTGTCATGAGTCTAAGG+GGG	0.630347	1.3:+8222435	MS.gene51589:CDS
TAGGAGTGTTTGTTGCCATG+TGG	0.640277	1.3:+8222591	MS.gene51589:CDS
TTGGTGGCAAAACTGATGCA+TGG	0.676457	1.3:+8221768	MS.gene51589:CDS
TTCAAATCAGAAAAGCCACA+TGG	0.691376	1.3:-8222606	None:intergenic
GGTTGTCATGAGTCTAAGGG+GGG	0.691450	1.3:+8222436	MS.gene51589:CDS
GTTGTCATGAGTCTAAGGGG+GGG	0.700416	1.3:+8222437	MS.gene51589:CDS
GAAGGGTCAGAAGCTTACTG+TGG	0.745278	1.3:+8222415	MS.gene51589:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CATCACATAAAAATAAAAAT+TGG	-	chr1.3:8222176-8222195	None:intergenic	15.0%
!!!	AATATAAAAAAATTGGGTTT+TGG	-	chr1.3:8222096-8222115	None:intergenic	15.0%
!!!	ACAATAAAGAAACAATTTTA+AGG	-	chr1.3:8222004-8222023	None:intergenic	15.0%
!!!	TGAATTTTTACTGATAATTA+AGG	-	chr1.3:8221940-8221959	None:intergenic	15.0%
!!!	TGAATTTTTAGTGATAAAAA+AGG	-	chr1.3:8221898-8221917	None:intergenic	15.0%
!!	AAATGTGAAAATTACTTAGA+TGG	-	chr1.3:8221862-8221881	None:intergenic	20.0%
!!	GGTGGAAATATAAAAAAATT+GGG	-	chr1.3:8222102-8222121	None:intergenic	20.0%
!!	TGGTGGAAATATAAAAAAAT+TGG	-	chr1.3:8222103-8222122	None:intergenic	20.0%
!!!	TTTTTACATTTTCATCATCT+TGG	+	chr1.3:8222059-8222078	MS.gene51589:intron	20.0%
!	ATGAACAATAAAGTAGTTAG+TGG	-	chr1.3:8222212-8222231	None:intergenic	25.0%
!	TTGAAAACAAAATACCAAGA+TGG	-	chr1.3:8222123-8222142	None:intergenic	25.0%
!!	TTTTTATATTTCCACCATCT+TGG	+	chr1.3:8222106-8222125	MS.gene51589:intron	25.0%
!!!	TCATATTTTTGTTCTCAGTT+TGG	+	chr1.3:8222228-8222247	MS.gene51589:intron	25.0%
	AAAACAAAATACCAAGATGG+TGG	-	chr1.3:8222120-8222139	None:intergenic	30.0%
	AAAGTGAGATTTGATCATTC+TGG	+	chr1.3:8222353-8222372	MS.gene51589:CDS	30.0%
	AATCTGATTCTCTCAACAAA+TGG	+	chr1.3:8221807-8221826	MS.gene51589:CDS	30.0%
	ATCTGATTCTCTCAACAAAT+GGG	+	chr1.3:8221808-8221827	MS.gene51589:CDS	30.0%
!	TTCATCATCTTGTTCTCTTT+TGG	+	chr1.3:8221697-8221716	MS.gene51589:CDS	30.0%
!!	TTGGTTCTTTTTGTTCTCTT+TGG	+	chr1.3:8221716-8221735	MS.gene51589:CDS	30.0%
	CCATCAAACACTACAATGAT+GGG	+	chr1.3:8222324-8222343	MS.gene51589:CDS	35.0%
	CCATCATTGTAGTGTTTGAT+GGG	-	chr1.3:8222326-8222345	None:intergenic	35.0%
	TACTACATCAGTGGAGAAAA+GGG	+	chr1.3:8222383-8222402	MS.gene51589:CDS	35.0%
	TCAGTTTGGAAATATGAAGC+TGG	+	chr1.3:8222242-8222261	MS.gene51589:intron	35.0%
!	TTCTGTTTTGCAAGTGAGTA+AGG	+	chr1.3:8222271-8222290	MS.gene51589:CDS	35.0%
	AAAACAGTTGCACCACTTGT+TGG	-	chr1.3:8222545-8222564	None:intergenic	40.0%
	AGAAAAGGGTCATTGTGAGA+AGG	+	chr1.3:8222397-8222416	MS.gene51589:CDS	40.0%
	AGAGAATCAGATTCCGAAGA+AGG	-	chr1.3:8221800-8221819	None:intergenic	40.0%
	CCCATCAAACACTACAATGA+TGG	+	chr1.3:8222323-8222342	MS.gene51589:CDS	40.0%
	CCCATCATTGTAGTGTTTGA+TGG	-	chr1.3:8222327-8222346	None:intergenic	40.0%
	CTACTACATCAGTGGAGAAA+AGG	+	chr1.3:8222382-8222401	MS.gene51589:CDS	40.0%
	GAAAAGGGTCATTGTGAGAA+GGG	+	chr1.3:8222398-8222417	MS.gene51589:CDS	40.0%
	GCTGGTGAAAAAGCAACAAT+GGG	-	chr1.3:8222470-8222489	None:intergenic	40.0%
	TACTTAGATGGTCTCCAACT+TGG	-	chr1.3:8221850-8221869	None:intergenic	40.0%
	TCAAGTGTTCGTTTCCAAGT+TGG	+	chr1.3:8221833-8221852	MS.gene51589:CDS	40.0%
	TCTCCACTGATGTAGTAGTA+TGG	-	chr1.3:8222380-8222399	None:intergenic	40.0%
	TGCTGGTGAAAAAGCAACAA+TGG	-	chr1.3:8222471-8222490	None:intergenic	40.0%
	TGTGGTTGTCATGAGTCTAA+GGG	+	chr1.3:8222433-8222452	MS.gene51589:CDS	40.0%
	CTGTGGTTGTCATGAGTCTA+AGG	+	chr1.3:8222432-8222451	MS.gene51589:CDS	45.0%
	GCAGCTAAGGATATCTTGCT+TGG	+	chr1.3:8221749-8221768	MS.gene51589:CDS	45.0%
	GCTAAGGATATCTTGCTTGG+TGG	+	chr1.3:8221752-8221771	MS.gene51589:CDS	45.0%
	GGTCCATACTACTACATCAG+TGG	+	chr1.3:8222374-8222393	MS.gene51589:CDS	45.0%
	GTGGTTGTCATGAGTCTAAG+GGG	+	chr1.3:8222434-8222453	MS.gene51589:CDS	45.0%
	TGCATGGAAGGTTCCTTCTT+CGG	+	chr1.3:8221784-8221803	MS.gene51589:CDS	45.0%
	TGGCAAAACTGATGCATGGA+AGG	+	chr1.3:8221772-8221791	MS.gene51589:CDS	45.0%
	TGGTTGTCATGAGTCTAAGG+GGG	+	chr1.3:8222435-8222454	MS.gene51589:CDS	45.0%
!	AGTGGTGCAACTGTTTTGCA+AGG	+	chr1.3:8222548-8222567	MS.gene51589:CDS	45.0%
!	TGGTTGTGCTTTTGCAGCTA+AGG	+	chr1.3:8221736-8221755	MS.gene51589:CDS	45.0%
!	TTGGTGGCAAAACTGATGCA+TGG	+	chr1.3:8221768-8221787	MS.gene51589:CDS	45.0%
!!	TAGGAGTGTTTGTTGCCATG+TGG	+	chr1.3:8222591-8222610	MS.gene51589:CDS	45.0%
	CCATCAACTTCAGCTGGTGA+AGG	-	chr1.3:8222494-8222513	None:intergenic	50.0%
	CCTTCACCAGCTGAAGTTGA+TGG	+	chr1.3:8222491-8222510	MS.gene51589:CDS	50.0%
	GAAGGGTCAGAAGCTTACTG+TGG	+	chr1.3:8222415-8222434	MS.gene51589:CDS	50.0%
	GGTGGTGTATTTGTGGCTGT+AGG	+	chr1.3:8222572-8222591	MS.gene51589:CDS	50.0%
	GGTTGTCATGAGTCTAAGGG+GGG	+	chr1.3:8222436-8222455	MS.gene51589:CDS	50.0%
	GTTGTCATGAGTCTAAGGGG+GGG	+	chr1.3:8222437-8222456	MS.gene51589:CDS	50.0%
!	GCAACTGTTTTGCAAGGTGG+TGG	+	chr1.3:8222554-8222573	MS.gene51589:CDS	50.0%
!	GCAAGGTGGTGGTGTATTTG+TGG	+	chr1.3:8222565-8222584	MS.gene51589:CDS	50.0%
!	GGTGCAACTGTTTTGCAAGG+TGG	+	chr1.3:8222551-8222570	MS.gene51589:CDS	50.0%
	GCTGGACCATCAACTTCAGC+TGG	-	chr1.3:8222500-8222519	None:intergenic	55.0%
	GTTGCTCCAGCTCCAACAAG+TGG	+	chr1.3:8222530-8222549	MS.gene51589:CDS	55.0%
	TGAGTCTAAGGGGGGGAAGT+AGG	+	chr1.3:8222444-8222463	MS.gene51589:CDS	55.0%
!	ACTTCAGCTGGTGAAGGTGC+TGG	-	chr1.3:8222488-8222507	None:intergenic	55.0%
!	GTTGCACCACTTGTTGGAGC+TGG	-	chr1.3:8222539-8222558	None:intergenic	55.0%
!!	GCTGAAGTTGATGGTCCAGC+TGG	+	chr1.3:8222500-8222519	MS.gene51589:CDS	55.0%
	GGAGCAACAGCTGAGCCAGC+TGG	-	chr1.3:8222518-8222537	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	8221680	8222622	8221680	ID=MS.gene51589
chr1.3	mRNA	8221680	8222622	8221680	ID=MS.gene51589.t1;Parent=MS.gene51589
chr1.3	exon	8221680	8221866	8221680	ID=MS.gene51589.t1.exon1;Parent=MS.gene51589.t1
chr1.3	CDS	8221680	8221866	8221680	ID=cds.MS.gene51589.t1;Parent=MS.gene51589.t1
chr1.3	exon	8222246	8222622	8222246	ID=MS.gene51589.t1.exon2;Parent=MS.gene51589.t1
chr1.3	CDS	8222246	8222622	8222246	ID=cds.MS.gene51589.t1;Parent=MS.gene51589.t1

Gene Sequence

>MS.gene51589

ATGGCTGGTTCATCTTCTTCATCATCTTGTTCTCTTTTGGTTCTTTTTGTTCTCTTTGGTTGTGCTTTTGCAGCTAAGGATATCTTGCTTGGTGGCAAAACTGATGCATGGAAGGTTCCTTCTTCGGAATCTGATTCTCTCAACAAATGGGCTTCAAGTGTTCGTTTCCAAGTTGGAGACCATCTAAGTAATTTTCACATTTTCATTAATTTTTTCCTTTTTTATCACTAAAAATTCAATCTTTATGTTGATTTTTTCCTTAATTATCAGTAAAAATTCAATCTTTATGTTGATGTTTTCATGATCTTAGTAATTTTTATTCCTTAAAATTGTTTCTTTATTGTTTATGAATCAATTCTTTTTTCTTCTTTTTTTTTTTTTTTTACATTTTCATCATCTTGGTAATTTTATTTCCAAAACCCAATTTTTTTATATTTCCACCATCTTGGTATTTTGTTTTCAAAATTTTATAATTTATTTTGTTGATAAAAATCCAATTTTTATTTTTATGTGATGTGAGTAAGAGTAACCACTAACTACTTTATTGTTCATATTTTTGTTCTCAGTTTGGAAATATGAAGCTGGAAAAGATTCTGTTTTGCAAGTGAGTAAGGAAGATTATGATAGCTGCAACATCTCGAAACCCATCAAACACTACAATGATGGGAACACTAAAGTGAGATTTGATCATTCTGGTCCATACTACTACATCAGTGGAGAAAAGGGTCATTGTGAGAAGGGTCAGAAGCTTACTGTGGTTGTCATGAGTCTAAGGGGGGGAAGTAGGCCCATTGTTGCTTTTTCACCAGCACCTTCACCAGCTGAAGTTGATGGTCCAGCTGGCTCAGCTGTTGCTCCAGCTCCAACAAGTGGTGCAACTGTTTTGCAAGGTGGTGGTGTATTTGTGGCTGTAGGAGTGTTTGTTGCCATGTGGCTTTTCTGA

Protein sequence

>MS.gene51589.t1

MAGSSSSSSCSLLVLFVLFGCAFAAKDILLGGKTDAWKVPSSESDSLNKWASSVRFQVGDHLIWKYEAGKDSVLQVSKEDYDSCNISKPIKHYNDGNTKVRFDHSGPYYYISGEKGHCEKGQKLTVVVMSLRGGSRPIVAFSPAPSPAEVDGPAGSAVAPAPTSGATVLQGGGVFVAVGVFVAMWLF