Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52113.t1 | XP_013456535.1 | 99.5 | 567 | 3 | 0 | 1 | 567 | 1 | 567 | 0.00E+00 | 1166.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52113.t1 | P93472 | 94.2 | 567 | 33 | 0 | 1 | 567 | 1 | 567 | 0.0e+00 | 1119.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52113.t1 | A0A072UME9 | 99.5 | 567 | 3 | 0 | 1 | 567 | 1 | 567 | 0.0e+00 | 1166.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene52113 | 0.872017 | 4.39E-67 | -1.69E-46 |
| MS.gene050707 | MS.gene52113 | 0.819062 | 1.41E-52 | -1.69E-46 |
| MS.gene050710 | MS.gene52113 | 0.815063 | 1.12E-51 | -1.69E-46 |
| MS.gene051896 | MS.gene52113 | 0.818895 | 1.54E-52 | -1.69E-46 |
| MS.gene052169 | MS.gene52113 | 0.859599 | 3.70E-63 | -1.69E-46 |
| MS.gene052209 | MS.gene52113 | 0.886426 | 3.46E-72 | -1.69E-46 |
| MS.gene052308 | MS.gene52113 | 0.835109 | 2.03E-56 | -1.69E-46 |
| MS.gene053108 | MS.gene52113 | 0.803797 | 2.94E-49 | -1.69E-46 |
| MS.gene053173 | MS.gene52113 | 0.803769 | 2.98E-49 | -1.69E-46 |
| MS.gene054551 | MS.gene52113 | 0.811398 | 7.14E-51 | -1.69E-46 |
| MS.gene054593 | MS.gene52113 | 0.814767 | 1.30E-51 | -1.69E-46 |
| MS.gene054662 | MS.gene52113 | 0.828475 | 8.81E-55 | -1.69E-46 |
| MS.gene054850 | MS.gene52113 | 0.800269 | 1.56E-48 | -1.69E-46 |
| MS.gene054941 | MS.gene52113 | 0.86774 | 1.09E-65 | -1.69E-46 |
| MS.gene055308 | MS.gene52113 | 0.822664 | 2.10E-53 | -1.69E-46 |
| MS.gene055578 | MS.gene52113 | 0.812255 | 4.65E-51 | -1.69E-46 |
| MS.gene056041 | MS.gene52113 | 0.801573 | 8.45E-49 | -1.69E-46 |
| MS.gene05640 | MS.gene52113 | 0.826907 | 2.10E-54 | -1.69E-46 |
| MS.gene05652 | MS.gene52113 | 0.891391 | 4.15E-74 | -1.69E-46 |
| MS.gene05732 | MS.gene52113 | 0.802702 | 4.95E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene52113 | 0.830807 | 2.39E-55 | -1.69E-46 |
| MS.gene057669 | MS.gene52113 | 0.999504 | 2.419432e-317 | -1.69E-46 |
| MS.gene057701 | MS.gene52113 | 0.807987 | 3.86E-50 | -1.69E-46 |
| MS.gene058128 | MS.gene52113 | 0.85064 | 1.49E-60 | -1.69E-46 |
| MS.gene058827 | MS.gene52113 | 0.804221 | 2.40E-49 | -1.69E-46 |
| MS.gene058849 | MS.gene52113 | 0.80054 | 1.37E-48 | -1.69E-46 |
| MS.gene058853 | MS.gene52113 | 0.865815 | 4.49E-65 | -1.69E-46 |
| MS.gene05926 | MS.gene52113 | 0.850823 | 1.32E-60 | -1.69E-46 |
| MS.gene059616 | MS.gene52113 | 0.867272 | 1.55E-65 | -1.69E-46 |
| MS.gene059844 | MS.gene52113 | 0.814595 | 1.42E-51 | -1.69E-46 |
| MS.gene059905 | MS.gene52113 | 0.801308 | 9.57E-49 | -1.69E-46 |
| MS.gene06093 | MS.gene52113 | 0.840541 | 8.17E-58 | -1.69E-46 |
| MS.gene060985 | MS.gene52113 | 0.834168 | 3.50E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52113.t1 | MTR_4g074350 | 99.471 | 567 | 3 | 0 | 1 | 567 | 1 | 567 | 0.0 | 1174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52113.t1 | AT3G19820 | 80.319 | 564 | 107 | 2 | 1 | 563 | 1 | 561 | 0.0 | 959 |
| MS.gene52113.t1 | AT3G19820 | 80.319 | 564 | 107 | 2 | 1 | 563 | 1 | 561 | 0.0 | 959 |
| MS.gene52113.t1 | AT3G19820 | 80.319 | 564 | 107 | 2 | 1 | 563 | 1 | 561 | 0.0 | 959 |
Find 183 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTGATCTTTCTGCTTTC+AGG | 0.122233 | 4.1:-29577149 | MS.gene52113:CDS |
| TAACTTCATGTACTCCTTAA+TGG | 0.180078 | 4.1:+29576783 | None:intergenic |
| ATGCCTGTGCAATATCTTTC+AGG | 0.192669 | 4.1:+29576737 | None:intergenic |
| ATTGTCCTGGTCCCCATCTC+TGG | 0.205729 | 4.1:+29576696 | None:intergenic |
| TATCTTATTCCCCTTCTTCT+TGG | 0.210815 | 4.1:+29576582 | None:intergenic |
| GGTACCAACAACTGGTTTAT+AGG | 0.242029 | 4.1:+29576759 | None:intergenic |
| TTGCTGATCAATGGTGGTTT+AGG | 0.262363 | 4.1:-29576408 | MS.gene52113:CDS |
| ACCCAAATCTTCTTCCTCTT+AGG | 0.291716 | 4.1:+29577444 | None:intergenic |
| ACCGTTGGTGGCCTCATAAA+TGG | 0.294869 | 4.1:-29576997 | MS.gene52113:CDS |
| GATCAAGCTTATACCCATTA+AGG | 0.299055 | 4.1:-29576797 | MS.gene52113:CDS |
| TTCCTTCTGCCGCGTCTTGA+AGG | 0.306504 | 4.1:+29577311 | None:intergenic |
| TGCAGCTCAAAGCCTGCTTC+CGG | 0.316520 | 4.1:+29575765 | None:intergenic |
| GCCCTAAGAGGAAGAAGATT+TGG | 0.321771 | 4.1:-29577446 | MS.gene52113:CDS |
| AGCTTCACGCACCTCCTTCT+CGG | 0.323950 | 4.1:+29575449 | None:intergenic |
| AACTTCATGTACTCCTTAAT+GGG | 0.343574 | 4.1:+29576784 | None:intergenic |
| GAAGGAAGTTCCCACAAATA+TGG | 0.349276 | 4.1:-29576964 | MS.gene52113:CDS |
| AACTGAATGAGAAAAGCTTC+TGG | 0.349335 | 4.1:-29575572 | MS.gene52113:CDS |
| ATGCACCAGGTCCTGTGTTA+AGG | 0.363892 | 4.1:-29575686 | MS.gene52113:CDS |
| CTGGTCTATATGAGCATTGT+AGG | 0.368765 | 4.1:-29575536 | MS.gene52113:CDS |
| CAGGCTTTGAGCTGCAACGC+AGG | 0.375137 | 4.1:-29575758 | MS.gene52113:CDS |
| TTACGCTATTCCGTGGTCTC+AGG | 0.376933 | 4.1:-29576848 | MS.gene52113:CDS |
| CCCTAAGAGGAAGAAGATTT+GGG | 0.379452 | 4.1:-29577445 | MS.gene52113:CDS |
| CCGTGGTCTCAGGGAACACT+TGG | 0.380984 | 4.1:-29576838 | MS.gene52113:CDS |
| GAGCATTGTAGGAGGAAGTA+TGG | 0.383337 | 4.1:-29575525 | MS.gene52113:CDS |
| TGTGGCCTTCGAAATTGTTC+TGG | 0.388234 | 4.1:-29576923 | MS.gene52113:CDS |
| TTAAGGGGTGAGGTGTTTGA+TGG | 0.390138 | 4.1:-29575669 | MS.gene52113:CDS |
| TGAGAAATGTTGACTATAAG+AGG | 0.392610 | 4.1:-29577185 | MS.gene52113:CDS |
| TGCACCAGGTCCTGTGTTAA+GGG | 0.394470 | 4.1:-29575685 | MS.gene52113:CDS |
| CCCAAATCTTCTTCCTCTTA+GGG | 0.403561 | 4.1:+29577445 | None:intergenic |
| CCTGGATAACATGCATTTCA+TGG | 0.407151 | 4.1:+29576308 | None:intergenic |
| CAAGTTGCCAGTCAAAACTA+TGG | 0.409506 | 4.1:-29575793 | MS.gene52113:CDS |
| ACTTGCTGTGGTTGCTGAGC+TGG | 0.410845 | 4.1:-29577028 | MS.gene52113:CDS |
| GGCACACAAGATGTTTGTAT+TGG | 0.410878 | 4.1:-29576453 | MS.gene52113:CDS |
| AAAATAAAGTGTGAATGAAA+TGG | 0.412728 | 4.1:+29577371 | None:intergenic |
| CTTTGAGCTGCAACGCAGGC+AGG | 0.413552 | 4.1:-29575754 | MS.gene52113:CDS |
| TCAACATGGGGCAGATTACC+AGG | 0.420055 | 4.1:-29577074 | MS.gene52113:CDS |
| GCAGCTCAAAGCCTGCTTCC+GGG | 0.423109 | 4.1:+29575766 | None:intergenic |
| TCCTCCCATTTGCTGATCAA+TGG | 0.428047 | 4.1:-29576417 | MS.gene52113:CDS |
| ATAAATGGTTACGGGATAGA+AGG | 0.430522 | 4.1:-29576982 | MS.gene52113:CDS |
| ACACGAGCTGTGTGCATGAC+AGG | 0.431460 | 4.1:-29576628 | MS.gene52113:CDS |
| GGTTTAGGTTTCTGTTTGGC+TGG | 0.432107 | 4.1:-29576393 | MS.gene52113:CDS |
| AAATAAAGTGTGAATGAAAT+GGG | 0.432469 | 4.1:+29577372 | None:intergenic |
| GCACACAAGATGTTTGTATT+GGG | 0.432787 | 4.1:-29576452 | MS.gene52113:CDS |
| TCTTTCAGGGTACCAACAAC+TGG | 0.438314 | 4.1:+29576751 | None:intergenic |
| CTATCCCGTAACCATTTATG+AGG | 0.442459 | 4.1:+29576986 | None:intergenic |
| CTGTGCGTAGATTGGAGAAC+TGG | 0.442494 | 4.1:-29575638 | MS.gene52113:CDS |
| CCATGAAATGCATGTTATCC+AGG | 0.442794 | 4.1:-29576308 | MS.gene52113:CDS |
| CTCTGCATGTTGGTAGAACC+AGG | 0.442971 | 4.1:+29576534 | None:intergenic |
| TGCATATGCAGTTTCAAGGT+GGG | 0.443614 | 4.1:+29575419 | None:intergenic |
| TTCGAAATTGTTCTGGCAGA+TGG | 0.443717 | 4.1:-29576916 | MS.gene52113:CDS |
| ACAGCAAGTGCAAGATTCAT+AGG | 0.446972 | 4.1:+29577042 | None:intergenic |
| AACCACCATTGATCAGCAAA+TGG | 0.447819 | 4.1:+29576412 | None:intergenic |
| GCCTTGAGCAGAGAAACCTT+GGG | 0.447957 | 4.1:+29576361 | None:intergenic |
| ATCATAGTTTCAACGAAGTC+GGG | 0.449537 | 4.1:+29576661 | None:intergenic |
| GCAGACAAGGCCATCCTTTG+AGG | 0.452680 | 4.1:+29577239 | None:intergenic |
| TGCCTTGAGCAGAGAAACCT+TGG | 0.460485 | 4.1:+29576360 | None:intergenic |
| GGTGGCCTCATAAATGGTTA+CGG | 0.461286 | 4.1:-29576991 | MS.gene52113:CDS |
| CGTAAGCCGTGGATCGCTGT+TGG | 0.463167 | 4.1:-29577210 | MS.gene52113:CDS |
| GTGGCCTCATAAATGGTTAC+GGG | 0.464437 | 4.1:-29576990 | MS.gene52113:CDS |
| CTTCTGCATATGCAGTTTCA+AGG | 0.467078 | 4.1:+29575415 | None:intergenic |
| CGGAAAAGAGGCCATATTTG+TGG | 0.470653 | 4.1:+29576953 | None:intergenic |
| TTGTCCTGGTCCCCATCTCT+GGG | 0.472488 | 4.1:+29576697 | None:intergenic |
| GTAAGCCGTGGATCGCTGTT+GGG | 0.474322 | 4.1:-29577209 | MS.gene52113:CDS |
| TTAACCTATAAACCAGTTGT+TGG | 0.474861 | 4.1:-29576763 | MS.gene52113:CDS |
| TGCAGATGCTGTGCGTAGAT+TGG | 0.477605 | 4.1:-29575646 | MS.gene52113:CDS |
| AGGTGGGAGATGCACTAGAA+TGG | 0.479151 | 4.1:-29576264 | MS.gene52113:CDS |
| TCTTCTTCCTCTTAGGGCGC+AGG | 0.481487 | 4.1:+29577451 | None:intergenic |
| TTCTGGAGGATGTTTGATGC+TGG | 0.485214 | 4.1:-29575555 | MS.gene52113:CDS |
| AGAATTTCAAATCAGTCTGC+TGG | 0.485554 | 4.1:+29575384 | None:intergenic |
| TGGTGGTTTAGGTTTCTGTT+TGG | 0.486503 | 4.1:-29576397 | MS.gene52113:CDS |
| AGAATGGGTTGACCGTGAAA+TGG | 0.491720 | 4.1:-29576248 | MS.gene52113:CDS |
| CCAAGTGTTCCCTGAGACCA+CGG | 0.493362 | 4.1:+29576838 | None:intergenic |
| TGCTCCCAGAGATGGGGACC+AGG | 0.494088 | 4.1:-29576701 | MS.gene52113:CDS |
| AGGCTCCCCTGCGCCCTAAG+AGG | 0.499822 | 4.1:-29577458 | MS.gene52113:CDS |
| AATCATAGTTTCAACGAAGT+CGG | 0.503377 | 4.1:+29576660 | None:intergenic |
| GAAAGAAGAGGCCAAGAAGA+AGG | 0.504062 | 4.1:-29576593 | MS.gene52113:CDS |
| TGTGTACTACAAATCAAAGA+AGG | 0.504519 | 4.1:-29575481 | MS.gene52113:CDS |
| AGGTCCTGTGTTAAGGGGTG+AGG | 0.504591 | 4.1:-29575679 | MS.gene52113:CDS |
| GGTAGAGCCCCTTGTCAACA+TGG | 0.505052 | 4.1:-29577088 | MS.gene52113:CDS |
| TACGCTATTCCGTGGTCTCA+GGG | 0.506036 | 4.1:-29576847 | MS.gene52113:CDS |
| ACTATGGTTTACCCGGAAGC+AGG | 0.507054 | 4.1:-29575777 | MS.gene52113:CDS |
| GAACCTTCTCATCATTGTCC+TGG | 0.510778 | 4.1:+29576683 | None:intergenic |
| GGAAAAGAGGCCATATTTGT+GGG | 0.513523 | 4.1:+29576954 | None:intergenic |
| CTGGACGATCTTACCGTTGG+TGG | 0.514224 | 4.1:-29577009 | MS.gene52113:CDS |
| AGAGTACTCATTGTCCTTGG+TGG | 0.515091 | 4.1:+29576879 | None:intergenic |
| CAGACAAGGCCATCCTTTGA+GGG | 0.518053 | 4.1:+29577240 | None:intergenic |
| GGTGGGAGATGCACTAGAAT+GGG | 0.518452 | 4.1:-29576263 | MS.gene52113:CDS |
| AGGAGGAAGTATGGAGCTGT+TGG | 0.519209 | 4.1:-29575516 | MS.gene52113:CDS |
| TGCCTGTGCAATATCTTTCA+GGG | 0.520680 | 4.1:+29576738 | None:intergenic |
| CTTCTTCCTCTTAGGGCGCA+GGG | 0.523602 | 4.1:+29577452 | None:intergenic |
| ACAAAGAGAGAATGATTGCT+AGG | 0.523767 | 4.1:-29577110 | MS.gene52113:CDS |
| CTGAGCAATGTCGGATCTTG+AGG | 0.524921 | 4.1:-29577478 | None:intergenic |
| CCCCAAGGTTTCTCTGCTCA+AGG | 0.527182 | 4.1:-29576362 | MS.gene52113:CDS |
| ATCAGAGTACTCATTGTCCT+TGG | 0.528456 | 4.1:+29576876 | None:intergenic |
| TCCCATTTGCTGATCAATGG+TGG | 0.530260 | 4.1:-29576414 | MS.gene52113:CDS |
| CATACTTGTTCCATTGTACA+AGG | 0.532528 | 4.1:-29576284 | MS.gene52113:CDS |
| CACAAGATGTTTGTATTGGG+AGG | 0.533101 | 4.1:-29576449 | MS.gene52113:CDS |
| TTTGAGCTGCAACGCAGGCA+GGG | 0.534260 | 4.1:-29575753 | MS.gene52113:CDS |
| ACCACCATTGATCAGCAAAT+GGG | 0.535910 | 4.1:+29576413 | None:intergenic |
| AAAGAAGAGGCCAAGAAGAA+GGG | 0.540838 | 4.1:-29576592 | MS.gene52113:CDS |
| TTCGAAGGCCACAACAGTAT+CGG | 0.540909 | 4.1:+29576933 | None:intergenic |
| TTTAACAACCTTCTCAACAT+TGG | 0.541123 | 4.1:+29577281 | None:intergenic |
| GCATCTCCCACCTTGTACAA+TGG | 0.541928 | 4.1:+29576274 | None:intergenic |
| TGCAGAGACAGCACTCAAGA+AGG | 0.544521 | 4.1:-29576518 | MS.gene52113:CDS |
| GTGCCTGTGATAATATTCTC+TGG | 0.544851 | 4.1:+29576471 | None:intergenic |
| AAAAGTGTACCTCCATTTCA+CGG | 0.546091 | 4.1:+29576236 | None:intergenic |
| ACTACAAATCAAAGAAGGGC+AGG | 0.551021 | 4.1:-29575476 | MS.gene52113:CDS |
| CCACAACAGTATCGGAAAAG+AGG | 0.551694 | 4.1:+29576941 | None:intergenic |
| GTCCTTCAAGACGCGGCAGA+AGG | 0.553756 | 4.1:-29577313 | MS.gene52113:CDS |
| GGAGGAAGTATGGAGCTGTT+GGG | 0.553976 | 4.1:-29575515 | MS.gene52113:CDS |
| CTCATCCCAACAGCGATCCA+CGG | 0.556306 | 4.1:+29577204 | None:intergenic |
| TAATCTGCCCCATGTTGACA+AGG | 0.556764 | 4.1:+29577079 | None:intergenic |
| TGAGTGCTGTCTCTGCATGT+TGG | 0.556997 | 4.1:+29576524 | None:intergenic |
| TAGGATGGTGGTACAAAACC+TGG | 0.558047 | 4.1:-29576552 | MS.gene52113:CDS |
| TATGAATCTTGCACTTGCTG+TGG | 0.564180 | 4.1:-29577040 | MS.gene52113:CDS |
| ATAAGATAAACAGTGTAGGA+TGG | 0.564845 | 4.1:-29576567 | MS.gene52113:CDS |
| GTTTGTGTGGACAGAGCCAA+AGG | 0.564893 | 4.1:+29575820 | None:intergenic |
| ACAATGGAACAAGTATGTCC+TGG | 0.569876 | 4.1:+29576290 | None:intergenic |
| CTTGTTCCATTGTACAAGGT+GGG | 0.572279 | 4.1:-29576280 | MS.gene52113:CDS |
| GCTTACGAGCGGTGCAGACA+AGG | 0.572892 | 4.1:+29577226 | None:intergenic |
| GGGCAGGAAAACCGAGAAGG+AGG | 0.579702 | 4.1:-29575460 | MS.gene52113:CDS |
| CAGAGGAATCCCTCAAAGGA+TGG | 0.580415 | 4.1:-29577249 | MS.gene52113:CDS |
| TCTGCACCGCTCGTAAGCCG+TGG | 0.581740 | 4.1:-29577221 | MS.gene52113:CDS |
| AATGGGTATAAGCTTGATCT+CGG | 0.583090 | 4.1:+29576801 | None:intergenic |
| GGGAATAAGATAAACAGTGT+AGG | 0.583093 | 4.1:-29576571 | MS.gene52113:CDS |
| TTTGTAGTACACACTCATGA+AGG | 0.583475 | 4.1:+29575491 | None:intergenic |
| GTAGAGCCCCTTGTCAACAT+GGG | 0.583539 | 4.1:-29577087 | MS.gene52113:CDS |
| GGCAACTTGTACAGTTTGTG+TGG | 0.585709 | 4.1:+29575807 | None:intergenic |
| ACAAGATGTTTGTATTGGGA+GGG | 0.589194 | 4.1:-29576448 | MS.gene52113:CDS |
| CTGTGATAATATTCTCTGGT+GGG | 0.593410 | 4.1:+29576475 | None:intergenic |
| CGTGGTCTCAGGGAACACTT+GGG | 0.593768 | 4.1:-29576837 | MS.gene52113:CDS |
| CTGCATATGCAGTTTCAAGG+TGG | 0.595101 | 4.1:+29575418 | None:intergenic |
| CACGAGCTGTGTGCATGACA+GGG | 0.595145 | 4.1:-29576627 | MS.gene52113:CDS |
| TCTCTGCTCAAGGCAACTCA+AGG | 0.597619 | 4.1:-29576352 | MS.gene52113:CDS |
| GTCATGCACACAGCTCGTGT+TGG | 0.600280 | 4.1:+29576631 | None:intergenic |
| GAGCTGGACGATCTTACCGT+TGG | 0.600852 | 4.1:-29577012 | MS.gene52113:CDS |
| TTTGTGTGGACAGAGCCAAA+GGG | 0.601704 | 4.1:+29575821 | None:intergenic |
| TTCTTCCTCTTAGGGCGCAG+GGG | 0.604740 | 4.1:+29577453 | None:intergenic |
| CAAAGAGAGAATGATTGCTA+GGG | 0.605431 | 4.1:-29577109 | MS.gene52113:CDS |
| TCACCCCTTAACACAGGACC+TGG | 0.606936 | 4.1:+29575681 | None:intergenic |
| ACCATTTATGAGGCCACCAA+CGG | 0.607260 | 4.1:+29576996 | None:intergenic |
| GTCTATATGAGCATTGTAGG+AGG | 0.608973 | 4.1:-29575533 | MS.gene52113:CDS |
| GAGGTATGCTTCGAAAGAAG+AGG | 0.610183 | 4.1:-29576605 | MS.gene52113:CDS |
| TTGTTAAACGTCTCAAACAG+AGG | 0.610205 | 4.1:-29577266 | MS.gene52113:CDS |
| CAAACAGAGGAATCCCTCAA+AGG | 0.611223 | 4.1:-29577253 | MS.gene52113:CDS |
| AAGAAGAGGCCAAGAAGAAG+GGG | 0.611230 | 4.1:-29576591 | MS.gene52113:CDS |
| GCAGAGACAGCACTCAAGAA+GGG | 0.611871 | 4.1:-29576517 | MS.gene52113:CDS |
| TACCCTGAAAGATATTGCAC+AGG | 0.613826 | 4.1:-29576740 | MS.gene52113:CDS |
| ATTCATAGGCACAGTCACCC+TGG | 0.614144 | 4.1:+29577056 | None:intergenic |
| ACACGATGCCAATGTTGAGA+AGG | 0.614178 | 4.1:-29577289 | MS.gene52113:CDS |
| ATCTGCCAGAACAATTTCGA+AGG | 0.615777 | 4.1:+29576918 | None:intergenic |
| GAAGGGCAGGAAAACCGAGA+AGG | 0.616478 | 4.1:-29575463 | MS.gene52113:CDS |
| GTGTACTACAAATCAAAGAA+GGG | 0.617792 | 4.1:-29575480 | MS.gene52113:CDS |
| GCTCAAATGTTCACAGACGT+TGG | 0.618493 | 4.1:-29575717 | MS.gene52113:CDS |
| AATCTGCCCCATGTTGACAA+GGG | 0.619059 | 4.1:+29577080 | None:intergenic |
| CCACCAGAGAATATTATCAC+AGG | 0.620417 | 4.1:-29576474 | MS.gene52113:CDS |
| GGACCAGGACAATGATGAGA+AGG | 0.621081 | 4.1:-29576686 | MS.gene52113:CDS |
| GAGAAATGTTGACTATAAGA+GGG | 0.622561 | 4.1:-29577184 | MS.gene52113:CDS |
| ATCTGCCCCATGTTGACAAG+GGG | 0.624488 | 4.1:+29577081 | None:intergenic |
| GTTGGAGTTTACTATGCACC+AGG | 0.625636 | 4.1:-29575699 | MS.gene52113:CDS |
| GCACCAGGTCCTGTGTTAAG+GGG | 0.625785 | 4.1:-29575684 | MS.gene52113:CDS |
| TGAATGAGAAAAGCTTCTGG+AGG | 0.626733 | 4.1:-29575569 | MS.gene52113:CDS |
| AGTCAAAACTATGGTTTACC+CGG | 0.628391 | 4.1:-29575784 | MS.gene52113:CDS |
| ACTTGTTCCATTGTACAAGG+TGG | 0.646015 | 4.1:-29576281 | MS.gene52113:CDS |
| CCTGTGATAATATTCTCTGG+TGG | 0.646613 | 4.1:+29576474 | None:intergenic |
| TTCTCTTGTTAAAGCCACCA+AGG | 0.648409 | 4.1:-29576893 | MS.gene52113:CDS |
| ACCATTGATCAGCAAATGGG+AGG | 0.651120 | 4.1:+29576416 | None:intergenic |
| AGCGATCCACGGCTTACGAG+CGG | 0.651614 | 4.1:+29577215 | None:intergenic |
| ATGGGTTGACCGTGAAATGG+AGG | 0.651686 | 4.1:-29576245 | MS.gene52113:intron |
| CCTTGAGCAGAGAAACCTTG+GGG | 0.652575 | 4.1:+29576362 | None:intergenic |
| AACACCTCACCCCTTAACAC+AGG | 0.657021 | 4.1:+29575675 | None:intergenic |
| AGATAAACAGTGTAGGATGG+TGG | 0.658759 | 4.1:-29576564 | MS.gene52113:CDS |
| TAGAGCCCCTTGTCAACATG+GGG | 0.667503 | 4.1:-29577086 | MS.gene52113:CDS |
| TTGTGTGGACAGAGCCAAAG+GGG | 0.667538 | 4.1:+29575822 | None:intergenic |
| AGTTCAGACACAGCGTACTG+TGG | 0.672226 | 4.1:+29575591 | None:intergenic |
| CTTGAGCAGAGAAACCTTGG+GGG | 0.692352 | 4.1:+29576363 | None:intergenic |
| CAACATGGGGCAGATTACCA+GGG | 0.696657 | 4.1:-29577073 | MS.gene52113:CDS |
| AGTGGAAGTCCTTCAAGACG+CGG | 0.706174 | 4.1:-29577320 | MS.gene52113:CDS |
| TTGAGCAGAGAAACCTTGGG+GGG | 0.708905 | 4.1:+29576364 | None:intergenic |
| GAGCTGTGTGCATGACAGGG+AGG | 0.732610 | 4.1:-29576624 | MS.gene52113:CDS |
| TGTGTGGACAGAGCCAAAGG+GGG | 0.739581 | 4.1:+29575823 | None:intergenic |
| ACTCAGATCTCACATCACCA+AGG | 0.755020 | 4.1:+29577340 | None:intergenic |
| TTGGTGATGTGAGATCTGAG+TGG | 0.784388 | 4.1:-29577338 | MS.gene52113:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAACTAAAACATTATTA+AGG | + | chr4.1:29576667-29576686 | None:intergenic | 15.0% |
| !! | ATTGAAACTTAAACTTTAAA+TGG | + | chr4.1:29576730-29576749 | None:intergenic | 15.0% |
| !!! | TTAGTTAGTTTAATTTTTTC+AGG | - | chr4.1:29576677-29576696 | MS.gene52113:CDS | 15.0% |
| !! | AAAATAAAGTGTGAATGAAA+TGG | + | chr4.1:29575498-29575517 | None:intergenic | 20.0% |
| !! | AAATAAAGTGTGAATGAAAT+GGG | + | chr4.1:29575497-29575516 | None:intergenic | 20.0% |
| !! | AATCATAAGAAACTAAACTT+GGG | - | chr4.1:29576747-29576766 | MS.gene52113:CDS | 20.0% |
| ! | ATCATAAGAAACTAAACTTG+GGG | - | chr4.1:29576748-29576767 | MS.gene52113:CDS | 25.0% |
| ! | CAATCATAAGAAACTAAACT+TGG | - | chr4.1:29576746-29576765 | MS.gene52113:CDS | 25.0% |
| ! | CTGTTAAGATCTATAGTAAT+TGG | - | chr4.1:29576823-29576842 | MS.gene52113:CDS | 25.0% |
| AACTTCATGTACTCCTTAAT+GGG | + | chr4.1:29576085-29576104 | None:intergenic | 30.0% | |
| AATCATAGTTTCAACGAAGT+CGG | + | chr4.1:29576209-29576228 | None:intergenic | 30.0% | |
| ATAAGATAAACAGTGTAGGA+TGG | - | chr4.1:29576299-29576318 | MS.gene52113:CDS | 30.0% | |
| ATCTTAACAGACAAAGGAAA+TGG | + | chr4.1:29576813-29576832 | None:intergenic | 30.0% | |
| CTATAGATCTTAACAGACAA+AGG | + | chr4.1:29576819-29576838 | None:intergenic | 30.0% | |
| GAAGAACCACAAAAATAACA+AGG | + | chr4.1:29575475-29575494 | None:intergenic | 30.0% | |
| GTGTACTACAAATCAAAGAA+GGG | - | chr4.1:29577386-29577405 | MS.gene52113:CDS | 30.0% | |
| TAACTTCATGTACTCCTTAA+TGG | + | chr4.1:29576086-29576105 | None:intergenic | 30.0% | |
| TCTTAACAGACAAAGGAAAT+GGG | + | chr4.1:29576812-29576831 | None:intergenic | 30.0% | |
| TGTGTACTACAAATCAAAGA+AGG | - | chr4.1:29577385-29577404 | MS.gene52113:CDS | 30.0% | |
| TTAACCTATAAACCAGTTGT+TGG | - | chr4.1:29576103-29576122 | MS.gene52113:intron | 30.0% | |
| TTTAACAACCTTCTCAACAT+TGG | + | chr4.1:29575588-29575607 | None:intergenic | 30.0% | |
| ! | ACTATTTTGTTCAGTTTCGA+TGG | - | chr4.1:29575447-29575466 | MS.gene52113:CDS | 30.0% |
| ! | GAGAAATGTTGACTATAAGA+GGG | - | chr4.1:29575682-29575701 | MS.gene52113:CDS | 30.0% |
| ! | TGAGAAATGTTGACTATAAG+AGG | - | chr4.1:29575681-29575700 | MS.gene52113:CDS | 30.0% |
| !!! | ATGGATCCTTGTTATTTTTG+TGG | - | chr4.1:29575466-29575485 | MS.gene52113:CDS | 30.0% |
| !!! | CTTTATTTTCTCACATACCT+TGG | - | chr4.1:29575509-29575528 | MS.gene52113:CDS | 30.0% |
| AACTGAATGAGAAAAGCTTC+TGG | - | chr4.1:29577294-29577313 | MS.gene52113:CDS | 35.0% | |
| AATGGGTATAAGCTTGATCT+CGG | + | chr4.1:29576068-29576087 | None:intergenic | 35.0% | |
| ACAAAGAGAGAATGATTGCT+AGG | - | chr4.1:29575756-29575775 | MS.gene52113:CDS | 35.0% | |
| ACAAGATGTTTGTATTGGGA+GGG | - | chr4.1:29576418-29576437 | MS.gene52113:CDS | 35.0% | |
| AGTCAAAACTATGGTTTACC+CGG | - | chr4.1:29577082-29577101 | MS.gene52113:CDS | 35.0% | |
| ATAAATGGTTACGGGATAGA+AGG | - | chr4.1:29575884-29575903 | MS.gene52113:intron | 35.0% | |
| ATCATAGTTTCAACGAAGTC+GGG | + | chr4.1:29576208-29576227 | None:intergenic | 35.0% | |
| CAAAGAGAGAATGATTGCTA+GGG | - | chr4.1:29575757-29575776 | MS.gene52113:CDS | 35.0% | |
| CATACTTGTTCCATTGTACA+AGG | - | chr4.1:29576582-29576601 | MS.gene52113:CDS | 35.0% | |
| CTGTGATAATATTCTCTGGT+GGG | + | chr4.1:29576394-29576413 | None:intergenic | 35.0% | |
| GAAGAAGCAGTAAACTTCAA+AGG | + | chr4.1:29576869-29576888 | None:intergenic | 35.0% | |
| GATCAAGCTTATACCCATTA+AGG | - | chr4.1:29576069-29576088 | MS.gene52113:intron | 35.0% | |
| GCACACAAGATGTTTGTATT+GGG | - | chr4.1:29576414-29576433 | MS.gene52113:CDS | 35.0% | |
| GGGAATAAGATAAACAGTGT+AGG | - | chr4.1:29576295-29576314 | MS.gene52113:CDS | 35.0% | |
| TATCTTATTCCCCTTCTTCT+TGG | + | chr4.1:29576287-29576306 | None:intergenic | 35.0% | |
| TCAATTCAAGCTGATATGTC+AGG | - | chr4.1:29576945-29576964 | MS.gene52113:CDS | 35.0% | |
| TGTCATGTATGATTCAGTTG+TGG | - | chr4.1:29576972-29576991 | MS.gene52113:CDS | 35.0% | |
| TTGTTAAACGTCTCAAACAG+AGG | - | chr4.1:29575600-29575619 | MS.gene52113:CDS | 35.0% | |
| TTTGTAGTACACACTCATGA+AGG | + | chr4.1:29577378-29577397 | None:intergenic | 35.0% | |
| ! | AAAAGTGTACCTCCATTTCA+CGG | + | chr4.1:29576633-29576652 | None:intergenic | 35.0% |
| ! | AAGTTGATCTTTCTGCTTTC+AGG | - | chr4.1:29575717-29575736 | MS.gene52113:CDS | 35.0% |
| ! | ATCTATTTTACGCTATTCCG+TGG | - | chr4.1:29576011-29576030 | MS.gene52113:intron | 35.0% |
| !! | TTTTCAGGCTGTTTCATTCA+GGG | - | chr4.1:29576692-29576711 | MS.gene52113:CDS | 35.0% |
| !!! | TTTTTCAGGCTGTTTCATTC+AGG | - | chr4.1:29576691-29576710 | MS.gene52113:CDS | 35.0% |
| AAAGAAGAGGCCAAGAAGAA+GGG | - | chr4.1:29576274-29576293 | MS.gene52113:CDS | 40.0% | |
| AACCACCATTGATCAGCAAA+TGG | + | chr4.1:29576457-29576476 | None:intergenic | 40.0% | |
| ACAATGGAACAAGTATGTCC+TGG | + | chr4.1:29576579-29576598 | None:intergenic | 40.0% | |
| ACAGCAAGTGCAAGATTCAT+AGG | + | chr4.1:29575827-29575846 | None:intergenic | 40.0% | |
| ACCACCATTGATCAGCAAAT+GGG | + | chr4.1:29576456-29576475 | None:intergenic | 40.0% | |
| ACCCAAATCTTCTTCCTCTT+AGG | + | chr4.1:29575425-29575444 | None:intergenic | 40.0% | |
| ACTACAAATCAAAGAAGGGC+AGG | - | chr4.1:29577390-29577409 | MS.gene52113:CDS | 40.0% | |
| ACTTGTTCCATTGTACAAGG+TGG | - | chr4.1:29576585-29576604 | MS.gene52113:CDS | 40.0% | |
| AGATAAACAGTGTAGGATGG+TGG | - | chr4.1:29576302-29576321 | MS.gene52113:CDS | 40.0% | |
| ATCTGCCAGAACAATTTCGA+AGG | + | chr4.1:29575951-29575970 | None:intergenic | 40.0% | |
| ATGCCTGTGCAATATCTTTC+AGG | + | chr4.1:29576132-29576151 | None:intergenic | 40.0% | |
| CAAGTTGCCAGTCAAAACTA+TGG | - | chr4.1:29577073-29577092 | MS.gene52113:CDS | 40.0% | |
| CACAAGATGTTTGTATTGGG+AGG | - | chr4.1:29576417-29576436 | MS.gene52113:CDS | 40.0% | |
| CCACCAGAGAATATTATCAC+AGG | - | chr4.1:29576392-29576411 | MS.gene52113:CDS | 40.0% | |
| CCATGAAATGCATGTTATCC+AGG | - | chr4.1:29576558-29576577 | MS.gene52113:CDS | 40.0% | |
| CCCAAATCTTCTTCCTCTTA+GGG | + | chr4.1:29575424-29575443 | None:intergenic | 40.0% | |
| CCCTAAGAGGAAGAAGATTT+GGG | - | chr4.1:29575421-29575440 | MS.gene52113:CDS | 40.0% | |
| CCTGGATAACATGCATTTCA+TGG | + | chr4.1:29576561-29576580 | None:intergenic | 40.0% | |
| CCTGTGATAATATTCTCTGG+TGG | + | chr4.1:29576395-29576414 | None:intergenic | 40.0% | |
| CTATCCCGTAACCATTTATG+AGG | + | chr4.1:29575883-29575902 | None:intergenic | 40.0% | |
| CTTCTGCATATGCAGTTTCA+AGG | + | chr4.1:29577454-29577473 | None:intergenic | 40.0% | |
| CTTGTTCCATTGTACAAGGT+GGG | - | chr4.1:29576586-29576605 | MS.gene52113:CDS | 40.0% | |
| GAAGGAAGTTCCCACAAATA+TGG | - | chr4.1:29575902-29575921 | MS.gene52113:intron | 40.0% | |
| GGAAAAGAGGCCATATTTGT+GGG | + | chr4.1:29575915-29575934 | None:intergenic | 40.0% | |
| GGCACACAAGATGTTTGTAT+TGG | - | chr4.1:29576413-29576432 | MS.gene52113:CDS | 40.0% | |
| GTGCCTGTGATAATATTCTC+TGG | + | chr4.1:29576398-29576417 | None:intergenic | 40.0% | |
| TACCCTGAAAGATATTGCAC+AGG | - | chr4.1:29576126-29576145 | MS.gene52113:intron | 40.0% | |
| TGAATGAGAAAAGCTTCTGG+AGG | - | chr4.1:29577297-29577316 | MS.gene52113:CDS | 40.0% | |
| TGCATATGCAGTTTCAAGGT+GGG | + | chr4.1:29577450-29577469 | None:intergenic | 40.0% | |
| TGCCTGTGCAATATCTTTCA+GGG | + | chr4.1:29576131-29576150 | None:intergenic | 40.0% | |
| TTCGAAATTGTTCTGGCAGA+TGG | - | chr4.1:29575950-29575969 | MS.gene52113:intron | 40.0% | |
| TTCTCTTGTTAAAGCCACCA+AGG | - | chr4.1:29575973-29575992 | MS.gene52113:intron | 40.0% | |
| TTGCTGATCAATGGTGGTTT+AGG | - | chr4.1:29576458-29576477 | MS.gene52113:CDS | 40.0% | |
| ! | ATCAGAGTACTCATTGTCCT+TGG | + | chr4.1:29575993-29576012 | None:intergenic | 40.0% |
| ! | ATTCTTTTGCTCCCAGAGAT+GGG | - | chr4.1:29576158-29576177 | MS.gene52113:intron | 40.0% |
| ! | CTGGTCTATATGAGCATTGT+AGG | - | chr4.1:29577330-29577349 | MS.gene52113:CDS | 40.0% |
| ! | GGTACCAACAACTGGTTTAT+AGG | + | chr4.1:29576110-29576129 | None:intergenic | 40.0% |
| ! | GTCTATATGAGCATTGTAGG+AGG | - | chr4.1:29577333-29577352 | MS.gene52113:CDS | 40.0% |
| ! | TATGAATCTTGCACTTGCTG+TGG | - | chr4.1:29575826-29575845 | MS.gene52113:CDS | 40.0% |
| ! | TGGTGGTTTAGGTTTCTGTT+TGG | - | chr4.1:29576469-29576488 | MS.gene52113:CDS | 40.0% |
| !!! | GGGTAAACCATAGTTTTGAC+TGG | + | chr4.1:29577083-29577102 | None:intergenic | 40.0% |
| AAGAAGAGGCCAAGAAGAAG+GGG | - | chr4.1:29576275-29576294 | MS.gene52113:CDS | 45.0% | |
| AATCTGCCCCATGTTGACAA+GGG | + | chr4.1:29575789-29575808 | None:intergenic | 45.0% | |
| ACACGATGCCAATGTTGAGA+AGG | - | chr4.1:29575577-29575596 | MS.gene52113:CDS | 45.0% | |
| ACCATTGATCAGCAAATGGG+AGG | + | chr4.1:29576453-29576472 | None:intergenic | 45.0% | |
| ACCATTTATGAGGCCACCAA+CGG | + | chr4.1:29575873-29575892 | None:intergenic | 45.0% | |
| ACTCAGATCTCACATCACCA+AGG | + | chr4.1:29575529-29575548 | None:intergenic | 45.0% | |
| CAAACAGAGGAATCCCTCAA+AGG | - | chr4.1:29575613-29575632 | MS.gene52113:CDS | 45.0% | |
| CATAACAGATCTACCCCCTT+TGG | - | chr4.1:29577030-29577049 | MS.gene52113:CDS | 45.0% | |
| CGGAAAAGAGGCCATATTTG+TGG | + | chr4.1:29575916-29575935 | None:intergenic | 45.0% | |
| CTGCATATGCAGTTTCAAGG+TGG | + | chr4.1:29577451-29577470 | None:intergenic | 45.0% | |
| GAAAGAAGAGGCCAAGAAGA+AGG | - | chr4.1:29576273-29576292 | MS.gene52113:CDS | 45.0% | |
| GAACCTTCTCATCATTGTCC+TGG | + | chr4.1:29576186-29576205 | None:intergenic | 45.0% | |
| GAGGTATGCTTCGAAAGAAG+AGG | - | chr4.1:29576261-29576280 | MS.gene52113:CDS | 45.0% | |
| GCCCTAAGAGGAAGAAGATT+TGG | - | chr4.1:29575420-29575439 | MS.gene52113:CDS | 45.0% | |
| GCTCAAATGTTCACAGACGT+TGG | - | chr4.1:29577149-29577168 | MS.gene52113:CDS | 45.0% | |
| GGCAACTTGTACAGTTTGTG+TGG | + | chr4.1:29577062-29577081 | None:intergenic | 45.0% | |
| GGTGGCCTCATAAATGGTTA+CGG | - | chr4.1:29575875-29575894 | MS.gene52113:intron | 45.0% | |
| GTGGCCTCATAAATGGTTAC+GGG | - | chr4.1:29575876-29575895 | MS.gene52113:intron | 45.0% | |
| GTTGGAGTTTACTATGCACC+AGG | - | chr4.1:29577167-29577186 | MS.gene52113:CDS | 45.0% | |
| TAATCTGCCCCATGTTGACA+AGG | + | chr4.1:29575790-29575809 | None:intergenic | 45.0% | |
| TGTGGCCTTCGAAATTGTTC+TGG | - | chr4.1:29575943-29575962 | MS.gene52113:intron | 45.0% | |
| TTCGAAGGCCACAACAGTAT+CGG | + | chr4.1:29575936-29575955 | None:intergenic | 45.0% | |
| TTTGTGTGGACAGAGCCAAA+GGG | + | chr4.1:29577048-29577067 | None:intergenic | 45.0% | |
| ! | AGAGTACTCATTGTCCTTGG+TGG | + | chr4.1:29575990-29576009 | None:intergenic | 45.0% |
| ! | CCACAACAGTATCGGAAAAG+AGG | + | chr4.1:29575928-29575947 | None:intergenic | 45.0% |
| ! | CCTCTTTTCCGATACTGTTG+TGG | - | chr4.1:29575925-29575944 | MS.gene52113:intron | 45.0% |
| ! | GAGCATTGTAGGAGGAAGTA+TGG | - | chr4.1:29577341-29577360 | MS.gene52113:CDS | 45.0% |
| ! | GATTCTTTTGCTCCCAGAGA+TGG | - | chr4.1:29576157-29576176 | MS.gene52113:intron | 45.0% |
| ! | GGTTTAGGTTTCTGTTTGGC+TGG | - | chr4.1:29576473-29576492 | MS.gene52113:CDS | 45.0% |
| ! | TAGGATGGTGGTACAAAACC+TGG | - | chr4.1:29576314-29576333 | MS.gene52113:CDS | 45.0% |
| ! | TCCCATTTGCTGATCAATGG+TGG | - | chr4.1:29576452-29576471 | MS.gene52113:CDS | 45.0% |
| ! | TCCTCCCATTTGCTGATCAA+TGG | - | chr4.1:29576449-29576468 | MS.gene52113:CDS | 45.0% |
| ! | TCTTTCAGGGTACCAACAAC+TGG | + | chr4.1:29576118-29576137 | None:intergenic | 45.0% |
| ! | TTAAGGGGTGAGGTGTTTGA+TGG | - | chr4.1:29577197-29577216 | MS.gene52113:CDS | 45.0% |
| ! | TTCTGGAGGATGTTTGATGC+TGG | - | chr4.1:29577311-29577330 | MS.gene52113:CDS | 45.0% |
| ! | TTCTTTTGCTCCCAGAGATG+GGG | - | chr4.1:29576159-29576178 | MS.gene52113:intron | 45.0% |
| !! | AGAATGGGTTGACCGTGAAA+TGG | - | chr4.1:29576618-29576637 | MS.gene52113:CDS | 45.0% |
| !! | TTGGTGATGTGAGATCTGAG+TGG | - | chr4.1:29575528-29575547 | MS.gene52113:CDS | 45.0% |
| AACACCTCACCCCTTAACAC+AGG | + | chr4.1:29577194-29577213 | None:intergenic | 50.0% | |
| ACTATGGTTTACCCGGAAGC+AGG | - | chr4.1:29577089-29577108 | MS.gene52113:CDS | 50.0% | |
| AGGTGGGAGATGCACTAGAA+TGG | - | chr4.1:29576602-29576621 | MS.gene52113:CDS | 50.0% | |
| AGTGGAAGTCCTTCAAGACG+CGG | - | chr4.1:29575546-29575565 | MS.gene52113:CDS | 50.0% | |
| AGTTCAGACACAGCGTACTG+TGG | + | chr4.1:29577278-29577297 | None:intergenic | 50.0% | |
| ATCTGCCCCATGTTGACAAG+GGG | + | chr4.1:29575788-29575807 | None:intergenic | 50.0% | |
| ATGCACCAGGTCCTGTGTTA+AGG | - | chr4.1:29577180-29577199 | MS.gene52113:CDS | 50.0% | |
| ATTCATAGGCACAGTCACCC+TGG | + | chr4.1:29575813-29575832 | None:intergenic | 50.0% | |
| CAACATGGGGCAGATTACCA+GGG | - | chr4.1:29575793-29575812 | MS.gene52113:CDS | 50.0% | |
| CAGACAAGGCCATCCTTTGA+GGG | + | chr4.1:29575629-29575648 | None:intergenic | 50.0% | |
| CAGAGGAATCCCTCAAAGGA+TGG | - | chr4.1:29575617-29575636 | MS.gene52113:CDS | 50.0% | |
| CCTTGAGCAGAGAAACCTTG+GGG | + | chr4.1:29576507-29576526 | None:intergenic | 50.0% | |
| CTGTGCGTAGATTGGAGAAC+TGG | - | chr4.1:29577228-29577247 | MS.gene52113:CDS | 50.0% | |
| CTGTTTCATTCAGGGTGAGG+TGG | - | chr4.1:29576700-29576719 | MS.gene52113:CDS | 50.0% | |
| CTTGAGCAGAGAAACCTTGG+GGG | + | chr4.1:29576506-29576525 | None:intergenic | 50.0% | |
| GCAGAGACAGCACTCAAGAA+GGG | - | chr4.1:29576349-29576368 | MS.gene52113:CDS | 50.0% | |
| GCATCTCCCACCTTGTACAA+TGG | + | chr4.1:29576595-29576614 | None:intergenic | 50.0% | |
| GCCTTGAGCAGAGAAACCTT+GGG | + | chr4.1:29576508-29576527 | None:intergenic | 50.0% | |
| GGACCAGGACAATGATGAGA+AGG | - | chr4.1:29576180-29576199 | MS.gene52113:intron | 50.0% | |
| GGTGGGAGATGCACTAGAAT+GGG | - | chr4.1:29576603-29576622 | MS.gene52113:CDS | 50.0% | |
| GTAGAGCCCCTTGTCAACAT+GGG | - | chr4.1:29575779-29575798 | MS.gene52113:CDS | 50.0% | |
| GTTTGTGTGGACAGAGCCAA+AGG | + | chr4.1:29577049-29577068 | None:intergenic | 50.0% | |
| TACGCTATTCCGTGGTCTCA+GGG | - | chr4.1:29576019-29576038 | MS.gene52113:intron | 50.0% | |
| TAGAGCCCCTTGTCAACATG+GGG | - | chr4.1:29575780-29575799 | MS.gene52113:CDS | 50.0% | |
| TCAACATGGGGCAGATTACC+AGG | - | chr4.1:29575792-29575811 | MS.gene52113:CDS | 50.0% | |
| TCTCTGCTCAAGGCAACTCA+AGG | - | chr4.1:29576514-29576533 | MS.gene52113:CDS | 50.0% | |
| TGCACCAGGTCCTGTGTTAA+GGG | - | chr4.1:29577181-29577200 | MS.gene52113:CDS | 50.0% | |
| TGCAGAGACAGCACTCAAGA+AGG | - | chr4.1:29576348-29576367 | MS.gene52113:CDS | 50.0% | |
| TGCAGATGCTGTGCGTAGAT+TGG | - | chr4.1:29577220-29577239 | MS.gene52113:CDS | 50.0% | |
| TGCCTTGAGCAGAGAAACCT+TGG | + | chr4.1:29576509-29576528 | None:intergenic | 50.0% | |
| TTACGCTATTCCGTGGTCTC+AGG | - | chr4.1:29576018-29576037 | MS.gene52113:intron | 50.0% | |
| TTGAGCAGAGAAACCTTGGG+GGG | + | chr4.1:29576505-29576524 | None:intergenic | 50.0% | |
| TTGTGTGGACAGAGCCAAAG+GGG | + | chr4.1:29577047-29577066 | None:intergenic | 50.0% | |
| ! | AGGAGGAAGTATGGAGCTGT+TGG | - | chr4.1:29577350-29577369 | MS.gene52113:CDS | 50.0% |
| ! | AGGCTGTTTCATTCAGGGTG+AGG | - | chr4.1:29576697-29576716 | MS.gene52113:CDS | 50.0% |
| ! | ATGGGTTGACCGTGAAATGG+AGG | - | chr4.1:29576621-29576640 | MS.gene52113:CDS | 50.0% |
| ! | CTCTGCATGTTGGTAGAACC+AGG | + | chr4.1:29576335-29576354 | None:intergenic | 50.0% |
| ! | GGAGGAAGTATGGAGCTGTT+GGG | - | chr4.1:29577351-29577370 | MS.gene52113:CDS | 50.0% |
| ! | TGAGTGCTGTCTCTGCATGT+TGG | + | chr4.1:29576345-29576364 | None:intergenic | 50.0% |
| !! | ACCGTTGGTGGCCTCATAAA+TGG | - | chr4.1:29575869-29575888 | MS.gene52113:intron | 50.0% |
| ACACGAGCTGTGTGCATGAC+AGG | - | chr4.1:29576238-29576257 | MS.gene52113:intron | 55.0% | |
| AGCTTCACGCACCTCCTTCT+CGG | + | chr4.1:29577420-29577439 | None:intergenic | 55.0% | |
| AGGTCCTGTGTTAAGGGGTG+AGG | - | chr4.1:29577187-29577206 | MS.gene52113:CDS | 55.0% | |
| ATTGTCCTGGTCCCCATCTC+TGG | + | chr4.1:29576173-29576192 | None:intergenic | 55.0% | |
| CACGAGCTGTGTGCATGACA+GGG | - | chr4.1:29576239-29576258 | MS.gene52113:intron | 55.0% | |
| CCAAGTGTTCCCTGAGACCA+CGG | + | chr4.1:29576031-29576050 | None:intergenic | 55.0% | |
| CCCCAAGGTTTCTCTGCTCA+AGG | - | chr4.1:29576504-29576523 | MS.gene52113:CDS | 55.0% | |
| CGTGGTCTCAGGGAACACTT+GGG | - | chr4.1:29576029-29576048 | MS.gene52113:intron | 55.0% | |
| CTCATCCCAACAGCGATCCA+CGG | + | chr4.1:29575665-29575684 | None:intergenic | 55.0% | |
| CTGGACGATCTTACCGTTGG+TGG | - | chr4.1:29575857-29575876 | MS.gene52113:intron | 55.0% | |
| CTTCTTCCTCTTAGGGCGCA+GGG | + | chr4.1:29575417-29575436 | None:intergenic | 55.0% | |
| CTTGGGGCTGAGCTTTCATG+TGG | - | chr4.1:29576764-29576783 | MS.gene52113:CDS | 55.0% | |
| GAAGGGCAGGAAAACCGAGA+AGG | - | chr4.1:29577403-29577422 | MS.gene52113:CDS | 55.0% | |
| GAGCTGGACGATCTTACCGT+TGG | - | chr4.1:29575854-29575873 | MS.gene52113:intron | 55.0% | |
| GCACCAGGTCCTGTGTTAAG+GGG | - | chr4.1:29577182-29577201 | MS.gene52113:CDS | 55.0% | |
| GCAGACAAGGCCATCCTTTG+AGG | + | chr4.1:29575630-29575649 | None:intergenic | 55.0% | |
| GGTAGAGCCCCTTGTCAACA+TGG | - | chr4.1:29575778-29575797 | MS.gene52113:CDS | 55.0% | |
| GTAAGCCGTGGATCGCTGTT+GGG | - | chr4.1:29575657-29575676 | MS.gene52113:CDS | 55.0% | |
| GTCATGCACACAGCTCGTGT+TGG | + | chr4.1:29576238-29576257 | None:intergenic | 55.0% | |
| TCACCCCTTAACACAGGACC+TGG | + | chr4.1:29577188-29577207 | None:intergenic | 55.0% | |
| TCTTCTTCCTCTTAGGGCGC+AGG | + | chr4.1:29575418-29575437 | None:intergenic | 55.0% | |
| TGCAGCTCAAAGCCTGCTTC+CGG | + | chr4.1:29577104-29577123 | None:intergenic | 55.0% | |
| TGTGTGGACAGAGCCAAAGG+GGG | + | chr4.1:29577046-29577065 | None:intergenic | 55.0% | |
| TTCCTTCTGCCGCGTCTTGA+AGG | + | chr4.1:29575558-29575577 | None:intergenic | 55.0% | |
| TTCTTCCTCTTAGGGCGCAG+GGG | + | chr4.1:29575416-29575435 | None:intergenic | 55.0% | |
| TTGTCCTGGTCCCCATCTCT+GGG | + | chr4.1:29576172-29576191 | None:intergenic | 55.0% | |
| TTTGAGCTGCAACGCAGGCA+GGG | - | chr4.1:29577113-29577132 | MS.gene52113:CDS | 55.0% | |
| !! | ACTTGCTGTGGTTGCTGAGC+TGG | - | chr4.1:29575838-29575857 | MS.gene52113:intron | 55.0% |
| AGCGATCCACGGCTTACGAG+CGG | + | chr4.1:29575654-29575673 | None:intergenic | 60.0% | |
| CCGTGGTCTCAGGGAACACT+TGG | - | chr4.1:29576028-29576047 | MS.gene52113:intron | 60.0% | |
| CGTAAGCCGTGGATCGCTGT+TGG | - | chr4.1:29575656-29575675 | MS.gene52113:CDS | 60.0% | |
| CTTTGAGCTGCAACGCAGGC+AGG | - | chr4.1:29577112-29577131 | MS.gene52113:CDS | 60.0% | |
| GAGCTGTGTGCATGACAGGG+AGG | - | chr4.1:29576242-29576261 | MS.gene52113:intron | 60.0% | |
| GCAGCTCAAAGCCTGCTTCC+GGG | + | chr4.1:29577103-29577122 | None:intergenic | 60.0% | |
| GCTTACGAGCGGTGCAGACA+AGG | + | chr4.1:29575643-29575662 | None:intergenic | 60.0% | |
| GGGCAGGAAAACCGAGAAGG+AGG | - | chr4.1:29577406-29577425 | MS.gene52113:CDS | 60.0% | |
| GTCCTTCAAGACGCGGCAGA+AGG | - | chr4.1:29575553-29575572 | MS.gene52113:CDS | 60.0% | |
| !! | CAGGCTTTGAGCTGCAACGC+AGG | - | chr4.1:29577108-29577127 | MS.gene52113:CDS | 60.0% |
| TCTGCACCGCTCGTAAGCCG+TGG | - | chr4.1:29575645-29575664 | MS.gene52113:CDS | 65.0% | |
| TGCTCCCAGAGATGGGGACC+AGG | - | chr4.1:29576165-29576184 | MS.gene52113:intron | 65.0% | |
| ! | TGGCTGGTTGATGCCCCCCA+AGG | - | chr4.1:29576489-29576508 | MS.gene52113:CDS | 65.0% |
| AGGCTCCCCTGCGCCCTAAG+AGG | - | chr4.1:29575408-29575427 | MS.gene52113:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 29575395 | 29577493 | 29575395 | ID=MS.gene52113 |
| chr4.1 | mRNA | 29575395 | 29577493 | 29575395 | ID=MS.gene52113.t1;Parent=MS.gene52113 |
| chr4.1 | exon | 29576246 | 29577493 | 29576246 | ID=MS.gene52113.t1.exon1;Parent=MS.gene52113.t1 |
| chr4.1 | CDS | 29576246 | 29577493 | 29576246 | ID=cds.MS.gene52113.t1;Parent=MS.gene52113.t1 |
| chr4.1 | exon | 29575395 | 29575850 | 29575395 | ID=MS.gene52113.t1.exon2;Parent=MS.gene52113.t1 |
| chr4.1 | CDS | 29575395 | 29575850 | 29575395 | ID=cds.MS.gene52113.t1;Parent=MS.gene52113.t1 |
| Gene Sequence |
| Protein sequence |
