Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53545.t1 | XP_003591273.1 | 91.1 | 684 | 53 | 3 | 8 | 690 | 59 | 735 | 0.00E+00 | 1253 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53545.t1 | O82462 | 72.2 | 681 | 170 | 6 | 5 | 684 | 54 | 716 | 4.4e-294 | 1011.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53545.t1 | G7IAE3 | 91.1 | 684 | 53 | 3 | 8 | 690 | 59 | 735 | 0.0e+00 | 1253.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53545.t1 | MTR_1g085150 | 91.082 | 684 | 53 | 3 | 8 | 690 | 59 | 735 | 0.0 | 1278 |
| MS.gene53545.t1 | MTR_1g110430 | 34.429 | 517 | 305 | 12 | 170 | 665 | 266 | 769 | 5.71e-71 | 246 |
| MS.gene53545.t1 | MTR_8g009900 | 27.511 | 229 | 125 | 7 | 175 | 378 | 55 | 267 | 1.02e-12 | 71.6 |
| MS.gene53545.t1 | MTR_8g009900 | 27.511 | 229 | 125 | 7 | 175 | 378 | 55 | 267 | 1.56e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53545.t1 | AT5G26710 | 72.247 | 681 | 170 | 6 | 5 | 684 | 54 | 716 | 0.0 | 1028 |
| MS.gene53545.t1 | AT1G25350 | 33.140 | 516 | 308 | 12 | 173 | 665 | 269 | 770 | 1.31e-68 | 240 |
| MS.gene53545.t1 | AT1G25350 | 31.478 | 521 | 315 | 13 | 173 | 665 | 269 | 775 | 1.11e-59 | 215 |
| MS.gene53545.t1 | AT5G64050 | 25.833 | 240 | 120 | 7 | 173 | 378 | 52 | 267 | 1.34e-11 | 68.2 |
Find 137 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAGGAGAATTTGAAATTA+TGG | 0.223542 | 1.2:-28304897 | MS.gene53545:CDS |
| TTGACGACTGGCTGGTCTTT+TGG | 0.223662 | 1.2:+28305375 | None:intergenic |
| ATACTTGTTCAACAATAAAT+TGG | 0.225280 | 1.2:+28304422 | None:intergenic |
| AATGAATATATTGAATATAT+TGG | 0.243135 | 1.2:-28305432 | MS.gene53545:CDS |
| TGTTTATTATCGTTGCAATT+TGG | 0.246562 | 1.2:-28304782 | MS.gene53545:CDS |
| CGCAATGACCGCAGTGTGTC+TGG | 0.261894 | 1.2:+28304157 | None:intergenic |
| ATTTGTGGATAATTTGAAAA+AGG | 0.271054 | 1.2:-28305103 | MS.gene53545:CDS |
| CTTATCTACTTCCTTTACTA+TGG | 0.287844 | 1.2:+28303944 | None:intergenic |
| CCTCATCATAGAATTGAAAT+TGG | 0.294664 | 1.2:-28304757 | MS.gene53545:CDS |
| GCATCTTGGCCATAGGAATT+AGG | 0.299807 | 1.2:+28306261 | None:intergenic |
| TCCAGATGAACAAATGAAAA+AGG | 0.300971 | 1.2:-28304962 | MS.gene53545:CDS |
| TTACCTCATTACGAAGAAAA+AGG | 0.308169 | 1.2:-28303790 | MS.gene53545:intron |
| TCAGCAAACGAAAGCTTCTA+TGG | 0.315812 | 1.2:-28304540 | MS.gene53545:CDS |
| CGAATTTAGCCGGTTGAATA+TGG | 0.317857 | 1.2:-28304575 | MS.gene53545:CDS |
| AGATTACTTCCCTGAGTTGA+TGG | 0.323642 | 1.2:-28305034 | MS.gene53545:CDS |
| TGGAGAGAAAGGGATATTTC+AGG | 0.324909 | 1.2:-28303282 | MS.gene53545:CDS |
| GATGTCTGCTGCCTGCCATC+TGG | 0.343011 | 1.2:+28303208 | None:intergenic |
| TGAAGATAGCCACTGGGTTC+AGG | 0.349425 | 1.2:+28305234 | None:intergenic |
| GCTATCTGCGCAGGTCTTGC+AGG | 0.353784 | 1.2:-28305672 | MS.gene53545:intron |
| CCCAGTGGCTATCTTCATAT+TGG | 0.358754 | 1.2:-28305228 | MS.gene53545:CDS |
| AAGATACCACATATACAAAA+AGG | 0.360107 | 1.2:-28304040 | MS.gene53545:CDS |
| ACCCTGTGACATTCCCATCT+TGG | 0.408163 | 1.2:+28303919 | None:intergenic |
| TCATGGAATGGGACAAGCTC+TGG | 0.411380 | 1.2:-28304214 | MS.gene53545:CDS |
| GGAAGTAACCTTGATGGATT+GGG | 0.417880 | 1.2:-28303973 | MS.gene53545:CDS |
| AGTATTGCAGCTGGAGAGAA+AGG | 0.419290 | 1.2:-28303293 | MS.gene53545:CDS |
| AGTTGGATACACTTTATACT+TGG | 0.420137 | 1.2:+28304732 | None:intergenic |
| GGATCACGGAGTGATTTGTT+TGG | 0.426882 | 1.2:+28304805 | None:intergenic |
| TTCCAATGTAACGCAAAGAA+AGG | 0.430174 | 1.2:+28306298 | None:intergenic |
| AGGAAGTAACCTTGATGGAT+TGG | 0.439791 | 1.2:-28303974 | MS.gene53545:CDS |
| ACGCTTAAGATATCGCATAT+TGG | 0.440199 | 1.2:+28303321 | None:intergenic |
| CTGCATTTAGACTCTATGCC+AGG | 0.441589 | 1.2:+28304931 | None:intergenic |
| AAAATAGCAAAGTTGAATCA+TGG | 0.442197 | 1.2:-28304510 | MS.gene53545:CDS |
| GGCTAGTTTGAAAAGCATCT+TGG | 0.445460 | 1.2:+28306247 | None:intergenic |
| CCACAAAACTGAAGCTCACT+TGG | 0.452027 | 1.2:-28303860 | MS.gene53545:CDS |
| CTTCCCTGAGTTGATGGAAC+TGG | 0.453446 | 1.2:-28305028 | MS.gene53545:CDS |
| TTATGGAAGGAAATGATTGC+AGG | 0.457763 | 1.2:-28304880 | MS.gene53545:CDS |
| AAATCTCAATCTCATGGAAT+GGG | 0.463289 | 1.2:-28304225 | MS.gene53545:CDS |
| AAATTGCAACGATAATAAAC+AGG | 0.467261 | 1.2:+28304784 | None:intergenic |
| CAAGTATATTGATGACTACT+TGG | 0.468006 | 1.2:-28305742 | MS.gene53545:CDS |
| AAAATCTCAATCTCATGGAA+TGG | 0.472161 | 1.2:-28304226 | MS.gene53545:CDS |
| GATAAAGTGAAGAATGTGAA+TGG | 0.472243 | 1.2:-28305351 | MS.gene53545:CDS |
| ATAAAGTGAAGAATGTGAAT+GGG | 0.472454 | 1.2:-28305350 | MS.gene53545:CDS |
| CAGCTTGAGAAAGATGAGAA+TGG | 0.474195 | 1.2:-28303412 | MS.gene53545:CDS |
| TTCTCATCTACGAATTTAGC+CGG | 0.474652 | 1.2:-28304585 | MS.gene53545:CDS |
| TCCAATATGAAGATAGCCAC+TGG | 0.476082 | 1.2:+28305227 | None:intergenic |
| TACTTCCTCACCTGCTGATA+CGG | 0.478040 | 1.2:+28303989 | None:intergenic |
| GCAGTGTGTCTGGGACATAC+AGG | 0.479972 | 1.2:+28304167 | None:intergenic |
| AGCTTGAGAAAGATGAGAAT+GGG | 0.484893 | 1.2:-28303411 | MS.gene53545:CDS |
| ATGTCTGCTGCCTGCCATCT+GGG | 0.485977 | 1.2:+28303209 | None:intergenic |
| TCCAATGTAACGCAAAGAAA+GGG | 0.490189 | 1.2:+28306299 | None:intergenic |
| AATCAAACTCCGTCAATGTC+AGG | 0.490680 | 1.2:+28303811 | None:intergenic |
| CATAGTAAAGGAAGTAGATA+AGG | 0.490754 | 1.2:-28303943 | MS.gene53545:CDS |
| TGCTGAGCGATACAAAGGTC+AGG | 0.492981 | 1.2:-28305172 | MS.gene53545:CDS |
| GACCAAGATGGGAATGTCAC+AGG | 0.497471 | 1.2:-28303921 | MS.gene53545:CDS |
| TATGCACCTGTACTCTCATC+AGG | 0.500252 | 1.2:-28305786 | MS.gene53545:CDS |
| ACCCTTTCTTTGCGTTACAT+TGG | 0.501029 | 1.2:-28306300 | MS.gene53545:CDS |
| TCAAATTCTCCTCTACGCTA+TGG | 0.502831 | 1.2:+28304905 | None:intergenic |
| GGACAGGCAAAATCATAAGT+TGG | 0.503923 | 1.2:+28304715 | None:intergenic |
| GAGTGTAGACCATATTCAAC+CGG | 0.504461 | 1.2:+28304566 | None:intergenic |
| GGGATTGCAAATAACACGAT+TGG | 0.508386 | 1.2:+28303229 | None:intergenic |
| ATGCGGACAAATGATTTCTC+AGG | 0.508905 | 1.2:+28304101 | None:intergenic |
| TTCACTTTATCCTTGACGAC+TGG | 0.509750 | 1.2:+28305363 | None:intergenic |
| TTTCAGGTGCTGGAAAGAGA+TGG | 0.510988 | 1.2:-28305536 | MS.gene53545:intron |
| GACGCAGAGTCCGTATCAGC+AGG | 0.511379 | 1.2:-28303999 | MS.gene53545:CDS |
| TCAGCCAGTTCCATCAACTC+AGG | 0.512208 | 1.2:+28305024 | None:intergenic |
| TCTGATAACATTAAGGGAGG+AGG | 0.512500 | 1.2:-28305321 | MS.gene53545:CDS |
| CTTTATCCTTGACGACTGGC+TGG | 0.513178 | 1.2:+28305367 | None:intergenic |
| GATCTTCCAGATGCTGAAGT+TGG | 0.514176 | 1.2:-28305279 | MS.gene53545:CDS |
| AAAATTAATTAGCCAGGGTA+AGG | 0.515011 | 1.2:-28305001 | MS.gene53545:CDS |
| GGCATTTCCCCAATCCATCA+AGG | 0.517350 | 1.2:+28303965 | None:intergenic |
| CCTTCACGAGCATCAACAAA+TGG | 0.521928 | 1.2:+28304694 | None:intergenic |
| ACTAGTTAGCCTGACATTGA+CGG | 0.523373 | 1.2:-28303820 | MS.gene53545:CDS |
| AAGGTATCACTCATGCCCTT+CGG | 0.524399 | 1.2:-28304675 | MS.gene53545:CDS |
| TTCAGGTGCTGGAAAGAGAT+GGG | 0.528173 | 1.2:-28305535 | MS.gene53545:intron |
| GCAACTCTTCCTAATTCCTA+TGG | 0.529242 | 1.2:-28306270 | MS.gene53545:CDS |
| GGCGTGCAGTGTTGTGTCCG+TGG | 0.531455 | 1.2:-28304847 | MS.gene53545:CDS |
| GAAGTAGATAAGGACCAAGA+TGG | 0.533557 | 1.2:-28303933 | MS.gene53545:CDS |
| GGAGAATTTGAAATTATGGA+AGG | 0.534607 | 1.2:-28304893 | MS.gene53545:CDS |
| TTGAAAAGCATCTTGGCCAT+AGG | 0.537590 | 1.2:+28306254 | None:intergenic |
| GCGTGGAGAAGTATTGCAGC+TGG | 0.537955 | 1.2:-28303302 | MS.gene53545:CDS |
| GGGAATGTCACAGGGTTAAG+TGG | 0.540528 | 1.2:-28303912 | MS.gene53545:CDS |
| ATCGTAATGCTCAGTATCAC+AGG | 0.540697 | 1.2:-28304636 | MS.gene53545:CDS |
| CAGCCAGTTCCATCAACTCA+GGG | 0.544119 | 1.2:+28305025 | None:intergenic |
| AGGTGAGGAAGTAACCTTGA+TGG | 0.551874 | 1.2:-28303979 | MS.gene53545:CDS |
| TATTTGCAATCCCAGATGGC+AGG | 0.556570 | 1.2:-28303219 | MS.gene53545:CDS |
| GTGTTATTTGCAATCCCAGA+TGG | 0.560737 | 1.2:-28303223 | MS.gene53545:CDS |
| AAGTAGATAAGGACCAAGAT+GGG | 0.560937 | 1.2:-28303932 | MS.gene53545:CDS |
| GCAATGACCGCAGTGTGTCT+GGG | 0.562664 | 1.2:+28304158 | None:intergenic |
| AAATAGCAAAGTTGAATCAT+GGG | 0.567986 | 1.2:-28304509 | MS.gene53545:CDS |
| ACGAGCATCAACAAATGGAC+AGG | 0.568037 | 1.2:+28304699 | None:intergenic |
| CCAATTTCAATTCTATGATG+AGG | 0.571584 | 1.2:+28304757 | None:intergenic |
| TTGGGGAAATGCCATAGTAA+AGG | 0.578640 | 1.2:-28303955 | MS.gene53545:CDS |
| TCACAGGATTCAAGAGGACA+TGG | 0.578665 | 1.2:-28304620 | MS.gene53545:CDS |
| GCAGGGCCTGATGAGAGTAC+AGG | 0.580273 | 1.2:+28305780 | None:intergenic |
| CTAACTAGTTCGTCTAACTC+AGG | 0.584002 | 1.2:+28303834 | None:intergenic |
| GCGTGCAGTGTTGTGTCCGT+GGG | 0.585053 | 1.2:-28304846 | MS.gene53545:CDS |
| GTGTTGTGTCCGTGGGAAGT+TGG | 0.586102 | 1.2:-28304839 | MS.gene53545:CDS |
| ACGATGGTACAATTCAATAG+TGG | 0.586943 | 1.2:-28305475 | MS.gene53545:CDS |
| GCAGATCTAGCTATCTGCGC+AGG | 0.590365 | 1.2:-28305681 | MS.gene53545:CDS |
| AGAGTCCGTATCAGCAGGTG+AGG | 0.595755 | 1.2:-28303994 | MS.gene53545:CDS |
| CCTTGCAGTGTAGGAAATCG+TGG | 0.598579 | 1.2:+28304481 | None:intergenic |
| GTGGTATTCACTTGACCGAA+GGG | 0.600221 | 1.2:+28304660 | None:intergenic |
| AATGATTGCAGGATCAGAGA+GGG | 0.601106 | 1.2:-28304869 | MS.gene53545:CDS |
| GAAAGAGATGGGAAAGCTTG+AGG | 0.602516 | 1.2:-28305524 | MS.gene53545:CDS |
| TGCAAGGGTTAAGCACGTCA+AGG | 0.602620 | 1.2:+28303374 | None:intergenic |
| CATTTGTCCGCATCATACCT+AGG | 0.604356 | 1.2:-28304091 | MS.gene53545:CDS |
| CCACGATTTCCTACACTGCA+AGG | 0.607513 | 1.2:-28304481 | MS.gene53545:CDS |
| AAAAGACCAGCCAGTCGTCA+AGG | 0.611058 | 1.2:-28305373 | MS.gene53545:CDS |
| CCATTTGTTGATGCTCGTGA+AGG | 0.612122 | 1.2:-28304694 | MS.gene53545:CDS |
| CGCACAATTCCTTGCAGTGT+AGG | 0.612505 | 1.2:+28304472 | None:intergenic |
| CAGTGTGTCTGGGACATACA+GGG | 0.618476 | 1.2:+28304168 | None:intergenic |
| TAAAGTGAAGAATGTGAATG+GGG | 0.619059 | 1.2:-28305349 | MS.gene53545:CDS |
| GTATTGCAGCTGGAGAGAAA+GGG | 0.620537 | 1.2:-28303292 | MS.gene53545:CDS |
| CGTGGTATTCACTTGACCGA+AGG | 0.620830 | 1.2:+28304659 | None:intergenic |
| CCAATATGAAGATAGCCACT+GGG | 0.621615 | 1.2:+28305228 | None:intergenic |
| GTATTGTTAACCCTCACTGA+TGG | 0.633663 | 1.2:-28304125 | MS.gene53545:CDS |
| AATATGCGATATCTTAAGCG+TGG | 0.633685 | 1.2:-28303319 | MS.gene53545:CDS |
| GATACTGAGCATTACGATCG+TGG | 0.634209 | 1.2:+28304641 | None:intergenic |
| ACCAAGATGGGAATGTCACA+GGG | 0.639741 | 1.2:-28303920 | MS.gene53545:CDS |
| CTTGCATATCCAACTTCCCA+CGG | 0.647797 | 1.2:+28304830 | None:intergenic |
| AACGATAATAAACAGGATCA+CGG | 0.648773 | 1.2:+28304791 | None:intergenic |
| CGATTTGCACCTGAACCCAG+TGG | 0.648921 | 1.2:-28305243 | MS.gene53545:CDS |
| AATTCAATAGTGGCAGAACA+TGG | 0.653058 | 1.2:-28305465 | MS.gene53545:CDS |
| TTTCTCAGGACCATCAGTGA+GGG | 0.655675 | 1.2:+28304115 | None:intergenic |
| GGAAGATCTATCTCTGTCGA+AGG | 0.662042 | 1.2:+28305294 | None:intergenic |
| GAAGTAACCTTGATGGATTG+GGG | 0.667338 | 1.2:-28303972 | MS.gene53545:CDS |
| TCAGTATCACAGGATTCAAG+AGG | 0.673861 | 1.2:-28304626 | MS.gene53545:CDS |
| CAGACACACTGCGGTCATTG+CGG | 0.674648 | 1.2:-28304156 | MS.gene53545:CDS |
| CATCAACGTATGCCTTACCC+TGG | 0.678645 | 1.2:+28304989 | None:intergenic |
| ATTTCTCAGGACCATCAGTG+AGG | 0.679162 | 1.2:+28304114 | None:intergenic |
| CTGCAAGGAATTGTGCGTAG+AGG | 0.680567 | 1.2:-28304466 | MS.gene53545:CDS |
| AATATCAAAATCTTGCACGA+TGG | 0.684460 | 1.2:-28305491 | MS.gene53545:CDS |
| ATGCAGAAACCATAGCGTAG+AGG | 0.685688 | 1.2:-28304914 | MS.gene53545:CDS |
| CACAGGATTCAAGAGGACAT+GGG | 0.686727 | 1.2:-28304619 | MS.gene53545:CDS |
| AAATGATTGCAGGATCAGAG+AGG | 0.689019 | 1.2:-28304870 | MS.gene53545:CDS |
| ATGATTGCAGGATCAGAGAG+GGG | 0.699565 | 1.2:-28304868 | MS.gene53545:CDS |
| TGTATGTCCCAGACACACTG+CGG | 0.755590 | 1.2:-28304165 | MS.gene53545:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAATATATTGAATATAT+TGG | - | chr1.2:28304078-28304097 | MS.gene53545:CDS | 10.0% |
| !! | AAAAGAAAAAAAAGAATTTG+TGG | - | chr1.2:28304392-28304411 | MS.gene53545:intron | 15.0% |
| !! | ACAAATTCTTATAACATATA+TGG | + | chr1.2:28305867-28305886 | None:intergenic | 15.0% |
| !! | ATAAGAAATACAATAGAATA+TGG | - | chr1.2:28305167-28305186 | MS.gene53545:CDS | 15.0% |
| !!! | AATTCTTTTTTTTCTTTTTC+AGG | + | chr1.2:28304390-28304409 | None:intergenic | 15.0% |
| !!! | ATGTTATAAGAATTTGTTAA+CGG | - | chr1.2:28305870-28305889 | MS.gene53545:intron | 15.0% |
| !!! | GTCAATAATTTTTTTATTGA+TGG | + | chr1.2:28305323-28305342 | None:intergenic | 15.0% |
| !! | AAGCAAATAAAAACTTAAAC+AGG | + | chr1.2:28306072-28306091 | None:intergenic | 20.0% |
| !! | AATTTCACTAAAACATCTTA+TGG | + | chr1.2:28303314-28303333 | None:intergenic | 20.0% |
| !! | AGCAAATAAAAACTTAAACA+GGG | + | chr1.2:28306071-28306090 | None:intergenic | 20.0% |
| !! | ATACTTGTTCAACAATAAAT+TGG | + | chr1.2:28305091-28305110 | None:intergenic | 20.0% |
| !! | ATATATCAGAAAAAATAACC+TGG | + | chr1.2:28303287-28303306 | None:intergenic | 20.0% |
| !! | ATTCTTATAACATATATGGA+AGG | + | chr1.2:28305863-28305882 | None:intergenic | 20.0% |
| !! | ATTGAATATATTGGCAAAAA+AGG | - | chr1.2:28304087-28304106 | MS.gene53545:CDS | 20.0% |
| !! | ATTTGTGGATAATTTGAAAA+AGG | - | chr1.2:28304407-28304426 | MS.gene53545:intron | 20.0% |
| !!! | ATAATTTTGAGTTTATACGT+TGG | - | chr1.2:28303484-28303503 | MS.gene53545:intron | 20.0% |
| !!! | GAGTTTTTAATTGTCTTTTA+AGG | - | chr1.2:28303372-28303391 | MS.gene53545:CDS | 20.0% |
| !!! | GATTTTTCTGATAACATTAA+GGG | - | chr1.2:28304183-28304202 | MS.gene53545:CDS | 20.0% |
| !!! | TAGTTTAACCGTTAATTTTA+GGG | - | chr1.2:28303517-28303536 | MS.gene53545:intron | 20.0% |
| !!! | TTAGTTTAACCGTTAATTTT+AGG | - | chr1.2:28303516-28303535 | MS.gene53545:intron | 20.0% |
| !!! | TTTGTTTCTGTCATTAATAA+AGG | - | chr1.2:28305760-28305779 | MS.gene53545:CDS | 20.0% |
| ! | AAAATAGCAAAGTTGAATCA+TGG | - | chr1.2:28305000-28305019 | MS.gene53545:CDS | 25.0% |
| ! | AAATAGCAAAGTTGAATCAT+GGG | - | chr1.2:28305001-28305020 | MS.gene53545:CDS | 25.0% |
| ! | AAATTGCAACGATAATAAAC+AGG | + | chr1.2:28304729-28304748 | None:intergenic | 25.0% |
| ! | AAGATACCACATATACAAAA+AGG | - | chr1.2:28305470-28305489 | MS.gene53545:CDS | 25.0% |
| ! | AATAAGTTGTTTAACCAAAC+AGG | + | chr1.2:28303399-28303418 | None:intergenic | 25.0% |
| ! | ATAAAGTGAAGAATGTGAAT+GGG | - | chr1.2:28304160-28304179 | MS.gene53545:CDS | 25.0% |
| ! | ATATATTGGCAAAAAAGGAT+CGG | - | chr1.2:28304092-28304111 | MS.gene53545:CDS | 25.0% |
| ! | ATCAAAAAATCTCAATCTCA+TGG | - | chr1.2:28305279-28305298 | MS.gene53545:CDS | 25.0% |
| ! | ATGATAAACACTTACGTATT+AGG | - | chr1.2:28303445-28303464 | MS.gene53545:intron | 25.0% |
| ! | TATCACAGATAAAGATGAAT+AGG | + | chr1.2:28303889-28303908 | None:intergenic | 25.0% |
| ! | TGATAAACACTTACGTATTA+GGG | - | chr1.2:28303446-28303465 | MS.gene53545:intron | 25.0% |
| ! | TGTTTATTATCGTTGCAATT+TGG | - | chr1.2:28304728-28304747 | MS.gene53545:CDS | 25.0% |
| !! | GGATTTTTCTGATAACATTA+AGG | - | chr1.2:28304182-28304201 | MS.gene53545:CDS | 25.0% |
| !! | TAGAGGAGAATTTGAAATTA+TGG | - | chr1.2:28304613-28304632 | MS.gene53545:CDS | 25.0% |
| !! | TATAGGTTGACAATAGTTTA+GGG | - | chr1.2:28303549-28303568 | MS.gene53545:intron | 25.0% |
| !! | TTATAGGTTGACAATAGTTT+AGG | - | chr1.2:28303548-28303567 | MS.gene53545:intron | 25.0% |
| AAAAAGGAGATTCTAGCATA+TGG | - | chr1.2:28306161-28306180 | MS.gene53545:intron | 30.0% | |
| AAAAAGGATGTTGAGATGTT+GGG | - | chr1.2:28304423-28304442 | MS.gene53545:intron | 30.0% | |
| AAAATCTCAATCTCATGGAA+TGG | - | chr1.2:28305284-28305303 | MS.gene53545:CDS | 30.0% | |
| AAAATTAATTAGCCAGGGTA+AGG | - | chr1.2:28304509-28304528 | MS.gene53545:CDS | 30.0% | |
| AAATCTCAATCTCATGGAAT+GGG | - | chr1.2:28305285-28305304 | MS.gene53545:CDS | 30.0% | |
| AACAAATGAAAAAGGAGAGA+AGG | - | chr1.2:28304556-28304575 | MS.gene53545:CDS | 30.0% | |
| AACGATAATAAACAGGATCA+CGG | + | chr1.2:28304722-28304741 | None:intergenic | 30.0% | |
| AATATCAAAATCTTGCACGA+TGG | - | chr1.2:28304019-28304038 | MS.gene53545:CDS | 30.0% | |
| ACCCTAAACCCTAAAATTAA+CGG | + | chr1.2:28303528-28303547 | None:intergenic | 30.0% | |
| AGATAAAGATGAATAGGCAT+AGG | + | chr1.2:28303883-28303902 | None:intergenic | 30.0% | |
| AGTTGGATACACTTTATACT+TGG | + | chr1.2:28304781-28304800 | None:intergenic | 30.0% | |
| ATATATGGAAGGTTCATGAT+TGG | + | chr1.2:28305852-28305871 | None:intergenic | 30.0% | |
| ATCTGAAAAGTCAAAGAAAC+AGG | + | chr1.2:28303688-28303707 | None:intergenic | 30.0% | |
| CATAGTAAAGGAAGTAGATA+AGG | - | chr1.2:28305567-28305586 | MS.gene53545:intron | 30.0% | |
| CCAATTTCAATTCTATGATG+AGG | + | chr1.2:28304756-28304775 | None:intergenic | 30.0% | |
| CCACATATACAAAAAGGATA+TGG | - | chr1.2:28305476-28305495 | MS.gene53545:CDS | 30.0% | |
| CCTCATCATAGAATTGAAAT+TGG | - | chr1.2:28304753-28304772 | MS.gene53545:CDS | 30.0% | |
| CTTATCTACTTCCTTTACTA+TGG | + | chr1.2:28305569-28305588 | None:intergenic | 30.0% | |
| GATAAAGTGAAGAATGTGAA+TGG | - | chr1.2:28304159-28304178 | MS.gene53545:CDS | 30.0% | |
| GCTGAAAAATTAATTAGCCA+GGG | - | chr1.2:28304504-28304523 | MS.gene53545:CDS | 30.0% | |
| GGACAATAATAAGGACAATA+TGG | + | chr1.2:28305944-28305963 | None:intergenic | 30.0% | |
| TAAAGTGAAGAATGTGAATG+GGG | - | chr1.2:28304161-28304180 | MS.gene53545:CDS | 30.0% | |
| TATATTGGCAAAAAAGGATC+GGG | - | chr1.2:28304093-28304112 | MS.gene53545:CDS | 30.0% | |
| TCCAGATGAACAAATGAAAA+AGG | - | chr1.2:28304548-28304567 | MS.gene53545:CDS | 30.0% | |
| TTACCTCATTACGAAGAAAA+AGG | - | chr1.2:28305720-28305739 | MS.gene53545:CDS | 30.0% | |
| TTGTGTCAGTAGAAATTGTA+TGG | + | chr1.2:28305829-28305848 | None:intergenic | 30.0% | |
| TTGTTGAACAAGTATGTACA+AGG | - | chr1.2:28305096-28305115 | MS.gene53545:CDS | 30.0% | |
| TTGTTTAGGGATCAAATTGA+AGG | - | chr1.2:28303622-28303641 | MS.gene53545:intron | 30.0% | |
| ! | ATACCTTTTTCTTCGTAATG+AGG | + | chr1.2:28305726-28305745 | None:intergenic | 30.0% |
| ! | CAAGTATATTGATGACTACT+TGG | - | chr1.2:28303768-28303787 | MS.gene53545:intron | 30.0% |
| ! | CCATATCCTTTTTGTATATG+TGG | + | chr1.2:28305479-28305498 | None:intergenic | 30.0% |
| ! | GGAGAATTTGAAATTATGGA+AGG | - | chr1.2:28304617-28304636 | MS.gene53545:CDS | 30.0% |
| ! | TAAGTGATGTTGTCTAAAAC+TGG | - | chr1.2:28303350-28303369 | MS.gene53545:CDS | 30.0% |
| ! | TCTTTTAAACAACCTTCCTA+TGG | - | chr1.2:28303922-28303941 | MS.gene53545:CDS | 30.0% |
| ! | TGACTTTTCAGATTGATGAA+TGG | - | chr1.2:28303695-28303714 | MS.gene53545:intron | 30.0% |
| ! | TTTTCTGATAACATTAAGGG+AGG | - | chr1.2:28304186-28304205 | MS.gene53545:CDS | 30.0% |
| !! | GTATGCACTTTTAAGAGAAT+GGG | + | chr1.2:28305975-28305994 | None:intergenic | 30.0% |
| !! | TCCTTTTTCATTTGTTCATC+TGG | + | chr1.2:28304552-28304571 | None:intergenic | 30.0% |
| !!! | AACCGTTAATTTTAGGGTTT+AGG | - | chr1.2:28303523-28303542 | MS.gene53545:intron | 30.0% |
| !!! | AATAACACGATTGGTTTTGA+AGG | + | chr1.2:28306275-28306294 | None:intergenic | 30.0% |
| !!! | ACCGTTAATTTTAGGGTTTA+GGG | - | chr1.2:28303524-28303543 | MS.gene53545:intron | 30.0% |
| !!! | TTTTAGGGTTTAGGGTTTAT+AGG | - | chr1.2:28303532-28303551 | MS.gene53545:intron | 30.0% |
| AAGTAGATAAGGACCAAGAT+GGG | - | chr1.2:28305578-28305597 | MS.gene53545:intron | 35.0% | |
| AATATGCGATATCTTAAGCG+TGG | - | chr1.2:28306191-28306210 | MS.gene53545:intron | 35.0% | |
| AATTCAATAGTGGCAGAACA+TGG | - | chr1.2:28304045-28304064 | MS.gene53545:CDS | 35.0% | |
| ACGATGGTACAATTCAATAG+TGG | - | chr1.2:28304035-28304054 | MS.gene53545:CDS | 35.0% | |
| ACGCTTAAGATATCGCATAT+TGG | + | chr1.2:28306192-28306211 | None:intergenic | 35.0% | |
| AGCTTGAGAAAGATGAGAAT+GGG | - | chr1.2:28306099-28306118 | MS.gene53545:intron | 35.0% | |
| GAAAAAGGATGTTGAGATGT+TGG | - | chr1.2:28304422-28304441 | MS.gene53545:intron | 35.0% | |
| GATCAGGATGGACAATAATA+AGG | + | chr1.2:28305953-28305972 | None:intergenic | 35.0% | |
| GGCTGAAAAATTAATTAGCC+AGG | - | chr1.2:28304503-28304522 | MS.gene53545:CDS | 35.0% | |
| GTGCTATAAAACTAGTTCCA+TGG | + | chr1.2:28305922-28305941 | None:intergenic | 35.0% | |
| TCCAATGTAACGCAAAGAAA+GGG | + | chr1.2:28303214-28303233 | None:intergenic | 35.0% | |
| TTATGGAAGGAAATGATTGC+AGG | - | chr1.2:28304630-28304649 | MS.gene53545:CDS | 35.0% | |
| TTCCAATGTAACGCAAAGAA+AGG | + | chr1.2:28303215-28303234 | None:intergenic | 35.0% | |
| TTCCATGGAAAGTTCATGAA+AGG | + | chr1.2:28305907-28305926 | None:intergenic | 35.0% | |
| TTCTCATCTACGAATTTAGC+CGG | - | chr1.2:28304925-28304944 | MS.gene53545:CDS | 35.0% | |
| ! | AACCAAAGTGTCTATGCATA+GGG | + | chr1.2:28305997-28306016 | None:intergenic | 35.0% |
| ! | ACAAAAAGTATGAAGCTGCT+GGG | - | chr1.2:28305443-28305462 | MS.gene53545:CDS | 35.0% |
| ! | AGCGATCAACATTTTAAGCA+TGG | + | chr1.2:28305242-28305261 | None:intergenic | 35.0% |
| ! | AGTGGTGTTTTACATCTTGA+AGG | - | chr1.2:28305616-28305635 | MS.gene53545:intron | 35.0% |
| ! | TATTTTGCTGAGCGATACAA+AGG | - | chr1.2:28304333-28304352 | MS.gene53545:intron | 35.0% |
| ! | TGCATCCATTTTCAAAAGCA+GGG | + | chr1.2:28303750-28303769 | None:intergenic | 35.0% |
| ! | TTGCATCCATTTTCAAAAGC+AGG | + | chr1.2:28303751-28303770 | None:intergenic | 35.0% |
| !! | ACTTTTAAGAGAATGGGATC+AGG | + | chr1.2:28305969-28305988 | None:intergenic | 35.0% |
| !! | GGTATGCACTTTTAAGAGAA+TGG | + | chr1.2:28305976-28305995 | None:intergenic | 35.0% |
| !!! | AGAATCTCCTTTTTTGTGCA+AGG | + | chr1.2:28306155-28306174 | None:intergenic | 35.0% |
| !!! | GAATCTCCTTTTTTGTGCAA+GGG | + | chr1.2:28306154-28306173 | None:intergenic | 35.0% |
| !!! | TTGTCTTTTAAGGTCCTGTT+TGG | - | chr1.2:28303382-28303401 | MS.gene53545:CDS | 35.0% |
| AAATGATTGCAGGATCAGAG+AGG | - | chr1.2:28304640-28304659 | MS.gene53545:CDS | 40.0% | |
| AATCAAACTCCGTCAATGTC+AGG | + | chr1.2:28305702-28305721 | None:intergenic | 40.0% | |
| AATGATTGCAGGATCAGAGA+GGG | - | chr1.2:28304641-28304660 | MS.gene53545:CDS | 40.0% | |
| ACCCTTTCTTTGCGTTACAT+TGG | - | chr1.2:28303210-28303229 | MS.gene53545:CDS | 40.0% | |
| AGATGACATGAACCATAGGA+AGG | + | chr1.2:28303937-28303956 | None:intergenic | 40.0% | |
| AGTTCAGAGACATAGTTCGA+GGG | - | chr1.2:28303592-28303611 | MS.gene53545:intron | 40.0% | |
| ATCGTAATGCTCAGTATCAC+AGG | - | chr1.2:28304874-28304893 | MS.gene53545:CDS | 40.0% | |
| ATGCGGACAAATGATTTCTC+AGG | + | chr1.2:28305412-28305431 | None:intergenic | 40.0% | |
| ATGGAGATGACATGAACCAT+AGG | + | chr1.2:28303941-28303960 | None:intergenic | 40.0% | |
| CAGCTTGAGAAAGATGAGAA+TGG | - | chr1.2:28306098-28306117 | MS.gene53545:intron | 40.0% | |
| CCAATATGAAGATAGCCACT+GGG | + | chr1.2:28304285-28304304 | None:intergenic | 40.0% | |
| CGAATTTAGCCGGTTGAATA+TGG | - | chr1.2:28304935-28304954 | MS.gene53545:CDS | 40.0% | |
| CTAACTAGTTCGTCTAACTC+AGG | + | chr1.2:28305679-28305698 | None:intergenic | 40.0% | |
| CTTACGTATTAGGGTCTGTT+TGG | - | chr1.2:28303455-28303474 | MS.gene53545:intron | 40.0% | |
| GAAGTAGATAAGGACCAAGA+TGG | - | chr1.2:28305577-28305596 | MS.gene53545:intron | 40.0% | |
| GACCTTTCATGAACTTTCCA+TGG | - | chr1.2:28305902-28305921 | MS.gene53545:intron | 40.0% | |
| GAGTGTAGACCATATTCAAC+CGG | + | chr1.2:28304947-28304966 | None:intergenic | 40.0% | |
| GCAACTCTTCCTAATTCCTA+TGG | - | chr1.2:28303240-28303259 | MS.gene53545:CDS | 40.0% | |
| GCTTAACCCTTGCACAAAAA+AGG | - | chr1.2:28306145-28306164 | MS.gene53545:intron | 40.0% | |
| GGACAGGCAAAATCATAAGT+TGG | + | chr1.2:28304798-28304817 | None:intergenic | 40.0% | |
| GGGATTGCAAATAACACGAT+TGG | + | chr1.2:28306284-28306303 | None:intergenic | 40.0% | |
| GTATTGTTAACCCTCACTGA+TGG | - | chr1.2:28305385-28305404 | MS.gene53545:CDS | 40.0% | |
| TACCCTATGCATAGACACTT+TGG | - | chr1.2:28305992-28306011 | MS.gene53545:intron | 40.0% | |
| TAGTTCAGAGACATAGTTCG+AGG | - | chr1.2:28303591-28303610 | MS.gene53545:intron | 40.0% | |
| TCAAATTCTCCTCTACGCTA+TGG | + | chr1.2:28304608-28304627 | None:intergenic | 40.0% | |
| TCAGCAAACGAAAGCTTCTA+TGG | - | chr1.2:28304970-28304989 | MS.gene53545:CDS | 40.0% | |
| TCAGTATCACAGGATTCAAG+AGG | - | chr1.2:28304884-28304903 | MS.gene53545:CDS | 40.0% | |
| TCCAATATGAAGATAGCCAC+TGG | + | chr1.2:28304286-28304305 | None:intergenic | 40.0% | |
| TCTGATAACATTAAGGGAGG+AGG | - | chr1.2:28304189-28304208 | MS.gene53545:CDS | 40.0% | |
| TGGAGAGAAAGGGATATTTC+AGG | - | chr1.2:28306228-28306247 | MS.gene53545:intron | 40.0% | |
| TTAAGAGAATGGGATCAGGA+TGG | + | chr1.2:28305965-28305984 | None:intergenic | 40.0% | |
| TTCACTTTATCCTTGACGAC+TGG | + | chr1.2:28304150-28304169 | None:intergenic | 40.0% | |
| TTGATCGCTGTTCTTGTACA+GGG | - | chr1.2:28305253-28305272 | MS.gene53545:CDS | 40.0% | |
| TTGGGGAAATGCCATAGTAA+AGG | - | chr1.2:28305555-28305574 | MS.gene53545:intron | 40.0% | |
| ! | ACTAGTTAGCCTGACATTGA+CGG | - | chr1.2:28305690-28305709 | MS.gene53545:CDS | 40.0% |
| ! | ACTTTTCCAACTTCAGCATC+TGG | + | chr1.2:28304240-28304259 | None:intergenic | 40.0% |
| ! | AGATGCTTTTCAAACTAGCC+AGG | - | chr1.2:28303266-28303285 | MS.gene53545:CDS | 40.0% |
| ! | AGATTACTTCCCTGAGTTGA+TGG | - | chr1.2:28304476-28304495 | MS.gene53545:CDS | 40.0% |
| ! | AGGAAGTAACCTTGATGGAT+TGG | - | chr1.2:28305536-28305555 | MS.gene53545:intron | 40.0% |
| ! | CACAAAAAGTATGAAGCTGC+TGG | - | chr1.2:28305442-28305461 | MS.gene53545:CDS | 40.0% |
| ! | CATCTACACTATGCCTTTTC+AGG | - | chr1.2:28303958-28303977 | MS.gene53545:CDS | 40.0% |
| ! | CGAAGAAAAAGGTATGTGCT+TGG | - | chr1.2:28305731-28305750 | MS.gene53545:CDS | 40.0% |
| ! | CTGAAAAGGCATAGTGTAGA+TGG | + | chr1.2:28303960-28303979 | None:intergenic | 40.0% |
| ! | GAACCAAAGTGTCTATGCAT+AGG | + | chr1.2:28305998-28306017 | None:intergenic | 40.0% |
| ! | TTTTGTGCCTAGGTATGATG+CGG | + | chr1.2:28305429-28305448 | None:intergenic | 40.0% |
| !! | GAAGTAACCTTGATGGATTG+GGG | - | chr1.2:28305538-28305557 | MS.gene53545:intron | 40.0% |
| !! | GCTTCATACTTTTTGTGCCT+AGG | + | chr1.2:28305439-28305458 | None:intergenic | 40.0% |
| !! | GGAAGTAACCTTGATGGATT+GGG | - | chr1.2:28305537-28305556 | MS.gene53545:intron | 40.0% |
| !! | GGCTAGTTTGAAAAGCATCT+TGG | + | chr1.2:28303266-28303285 | None:intergenic | 40.0% |
| !! | GTGTTATTTGCAATCCCAGA+TGG | - | chr1.2:28306287-28306306 | MS.gene53545:CDS | 40.0% |
| !! | TTGAAAAGCATCTTGGCCAT+AGG | + | chr1.2:28303259-28303278 | None:intergenic | 40.0% |
| !!! | GAGAAGCGTACGTTTTTAGT+TGG | - | chr1.2:28303790-28303809 | MS.gene53545:intron | 40.0% |
| ACCAAGATGGGAATGTCACA+GGG | - | chr1.2:28305590-28305609 | MS.gene53545:intron | 45.0% | |
| ACGAGCATCAACAAATGGAC+AGG | + | chr1.2:28304814-28304833 | None:intergenic | 45.0% | |
| ACTTAAACAGGGAAGCAAGC+AGG | + | chr1.2:28306060-28306079 | None:intergenic | 45.0% | |
| AGGTGAGGAAGTAACCTTGA+TGG | - | chr1.2:28305531-28305550 | MS.gene53545:CDS | 45.0% | |
| AGTATTGCAGCTGGAGAGAA+AGG | - | chr1.2:28306217-28306236 | MS.gene53545:intron | 45.0% | |
| ATGAAAAAGGAGAGAAGGCC+TGG | - | chr1.2:28304561-28304580 | MS.gene53545:CDS | 45.0% | |
| ATGATTGCAGGATCAGAGAG+GGG | - | chr1.2:28304642-28304661 | MS.gene53545:CDS | 45.0% | |
| ATGCAGAAACCATAGCGTAG+AGG | - | chr1.2:28304596-28304615 | MS.gene53545:CDS | 45.0% | |
| ATGGACACGTGAATTTCTCG+TGG | + | chr1.2:28305810-28305829 | None:intergenic | 45.0% | |
| ATTTCTCAGGACCATCAGTG+AGG | + | chr1.2:28305399-28305418 | None:intergenic | 45.0% | |
| CACAGGATTCAAGAGGACAT+GGG | - | chr1.2:28304891-28304910 | MS.gene53545:CDS | 45.0% | |
| CATTTGTCCGCATCATACCT+AGG | - | chr1.2:28305419-28305438 | MS.gene53545:CDS | 45.0% | |
| CCACAAAACTGAAGCTCACT+TGG | - | chr1.2:28305650-28305669 | MS.gene53545:intron | 45.0% | |
| CCCAGTGGCTATCTTCATAT+TGG | - | chr1.2:28304282-28304301 | MS.gene53545:intron | 45.0% | |
| CCTTCACGAGCATCAACAAA+TGG | + | chr1.2:28304819-28304838 | None:intergenic | 45.0% | |
| CGAGGGTGAGTGATTGTTTA+GGG | - | chr1.2:28303609-28303628 | MS.gene53545:intron | 45.0% | |
| CTGCATTTAGACTCTATGCC+AGG | + | chr1.2:28304582-28304601 | None:intergenic | 45.0% | |
| CTTGCATATCCAACTTCCCA+CGG | + | chr1.2:28304683-28304702 | None:intergenic | 45.0% | |
| GAAAGAGATGGGAAAGCTTG+AGG | - | chr1.2:28303986-28304005 | MS.gene53545:CDS | 45.0% | |
| GATACTGAGCATTACGATCG+TGG | + | chr1.2:28304872-28304891 | None:intergenic | 45.0% | |
| GATCTTCCAGATGCTGAAGT+TGG | - | chr1.2:28304231-28304250 | MS.gene53545:CDS | 45.0% | |
| GCATCTTGGCCATAGGAATT+AGG | + | chr1.2:28303252-28303271 | None:intergenic | 45.0% | |
| GGAAGATCTATCTCTGTCGA+AGG | + | chr1.2:28304219-28304238 | None:intergenic | 45.0% | |
| GTATTGCAGCTGGAGAGAAA+GGG | - | chr1.2:28306218-28306237 | MS.gene53545:intron | 45.0% | |
| GTGGTATTCACTTGACCGAA+GGG | + | chr1.2:28304853-28304872 | None:intergenic | 45.0% | |
| GTTGATCGCTGTTCTTGTAC+AGG | - | chr1.2:28305252-28305271 | MS.gene53545:CDS | 45.0% | |
| TACTTCCTCACCTGCTGATA+CGG | + | chr1.2:28305524-28305543 | None:intergenic | 45.0% | |
| TATGCACCTGTACTCTCATC+AGG | - | chr1.2:28303724-28303743 | MS.gene53545:intron | 45.0% | |
| TATTTGCAATCCCAGATGGC+AGG | - | chr1.2:28306291-28306310 | MS.gene53545:CDS | 45.0% | |
| TCACAGGATTCAAGAGGACA+TGG | - | chr1.2:28304890-28304909 | MS.gene53545:CDS | 45.0% | |
| TCGAGGGTGAGTGATTGTTT+AGG | - | chr1.2:28303608-28303627 | MS.gene53545:intron | 45.0% | |
| TCTCTTTCCAGCACCTGAAA+AGG | + | chr1.2:28303974-28303993 | None:intergenic | 45.0% | |
| TGATCGCTGTTCTTGTACAG+GGG | - | chr1.2:28305254-28305273 | MS.gene53545:CDS | 45.0% | |
| TTTCTCAGGACCATCAGTGA+GGG | + | chr1.2:28305398-28305417 | None:intergenic | 45.0% | |
| ! | AAGGTATCACTCATGCCCTT+CGG | - | chr1.2:28304835-28304854 | MS.gene53545:CDS | 45.0% |
| ! | CCAAGTGAGCTTCAGTTTTG+TGG | + | chr1.2:28305653-28305672 | None:intergenic | 45.0% |
| ! | CCATTTGTTGATGCTCGTGA+AGG | - | chr1.2:28304816-28304835 | MS.gene53545:CDS | 45.0% |
| !! | GGATCACGGAGTGATTTGTT+TGG | + | chr1.2:28304708-28304727 | None:intergenic | 45.0% |
| !! | TCAGGCCCTGCTTTTGAAAA+TGG | - | chr1.2:28303742-28303761 | MS.gene53545:intron | 45.0% |
| !! | TTCAGGTGCTGGAAAGAGAT+GGG | - | chr1.2:28303975-28303994 | MS.gene53545:CDS | 45.0% |
| !! | TTTCAGGTGCTGGAAAGAGA+TGG | - | chr1.2:28303974-28303993 | MS.gene53545:CDS | 45.0% |
| !!! | GGTTTTGAAGGCTGAACGAA+GGG | + | chr1.2:28306263-28306282 | None:intergenic | 45.0% |
| !!! | TGGTTTTGAAGGCTGAACGA+AGG | + | chr1.2:28306264-28306283 | None:intergenic | 45.0% |
| AAAAGACCAGCCAGTCGTCA+AGG | - | chr1.2:28304137-28304156 | MS.gene53545:CDS | 50.0% | |
| ACCCTGTGACATTCCCATCT+TGG | + | chr1.2:28305594-28305613 | None:intergenic | 50.0% | |
| CAGCCAGTTCCATCAACTCA+GGG | + | chr1.2:28304488-28304507 | None:intergenic | 50.0% | |
| CATCAACGTATGCCTTACCC+TGG | + | chr1.2:28304524-28304543 | None:intergenic | 50.0% | |
| CCACGATTTCCTACACTGCA+AGG | - | chr1.2:28305029-28305048 | MS.gene53545:CDS | 50.0% | |
| CCTTGCAGTGTAGGAAATCG+TGG | + | chr1.2:28305032-28305051 | None:intergenic | 50.0% | |
| CGCACAATTCCTTGCAGTGT+AGG | + | chr1.2:28305041-28305060 | None:intergenic | 50.0% | |
| CGTGGTATTCACTTGACCGA+AGG | + | chr1.2:28304854-28304873 | None:intergenic | 50.0% | |
| CTGCAAGGAATTGTGCGTAG+AGG | - | chr1.2:28305044-28305063 | MS.gene53545:CDS | 50.0% | |
| CTTTATCCTTGACGACTGGC+TGG | + | chr1.2:28304146-28304165 | None:intergenic | 50.0% | |
| GACCAAGATGGGAATGTCAC+AGG | - | chr1.2:28305589-28305608 | MS.gene53545:intron | 50.0% | |
| GATCGCTGTTCTTGTACAGG+GGG | - | chr1.2:28305255-28305274 | MS.gene53545:CDS | 50.0% | |
| GGCATTTCCCCAATCCATCA+AGG | + | chr1.2:28305548-28305567 | None:intergenic | 50.0% | |
| GGGAATGTCACAGGGTTAAG+TGG | - | chr1.2:28305598-28305617 | MS.gene53545:intron | 50.0% | |
| TCAGCCAGTTCCATCAACTC+AGG | + | chr1.2:28304489-28304508 | None:intergenic | 50.0% | |
| TCATGGAATGGGACAAGCTC+TGG | - | chr1.2:28305296-28305315 | MS.gene53545:CDS | 50.0% | |
| TGAAGATAGCCACTGGGTTC+AGG | + | chr1.2:28304279-28304298 | None:intergenic | 50.0% | |
| TGCAAGGGTTAAGCACGTCA+AGG | + | chr1.2:28306139-28306158 | None:intergenic | 50.0% | |
| TGCTGAGCGATACAAAGGTC+AGG | - | chr1.2:28304338-28304357 | MS.gene53545:intron | 50.0% | |
| TGTATGTCCCAGACACACTG+CGG | - | chr1.2:28305345-28305364 | MS.gene53545:CDS | 50.0% | |
| ! | CAGTGTGTCTGGGACATACA+GGG | + | chr1.2:28305345-28305364 | None:intergenic | 50.0% |
| !! | CTTCCCTGAGTTGATGGAAC+TGG | - | chr1.2:28304482-28304501 | MS.gene53545:CDS | 50.0% |
| !!! | CACTATGCCTTTTCAGGTGC+TGG | - | chr1.2:28303964-28303983 | MS.gene53545:CDS | 50.0% |
| !!! | TTGACGACTGGCTGGTCTTT+TGG | + | chr1.2:28304138-28304157 | None:intergenic | 50.0% |
| AGAGTCCGTATCAGCAGGTG+AGG | - | chr1.2:28305516-28305535 | MS.gene53545:CDS | 55.0% | |
| ATGTCTGCTGCCTGCCATCT+GGG | + | chr1.2:28306304-28306323 | None:intergenic | 55.0% | |
| CAGACACACTGCGGTCATTG+CGG | - | chr1.2:28305354-28305373 | MS.gene53545:CDS | 55.0% | |
| CGATTTGCACCTGAACCCAG+TGG | - | chr1.2:28304267-28304286 | MS.gene53545:intron | 55.0% | |
| GCAATGACCGCAGTGTGTCT+GGG | + | chr1.2:28305355-28305374 | None:intergenic | 55.0% | |
| GCAGATCTAGCTATCTGCGC+AGG | - | chr1.2:28303829-28303848 | MS.gene53545:CDS | 55.0% | |
| GTGTTGTGTCCGTGGGAAGT+TGG | - | chr1.2:28304671-28304690 | MS.gene53545:CDS | 55.0% | |
| ! | GCAGTGTGTCTGGGACATAC+AGG | + | chr1.2:28305346-28305365 | None:intergenic | 55.0% |
| !! | GCGTGGAGAAGTATTGCAGC+TGG | - | chr1.2:28306208-28306227 | MS.gene53545:intron | 55.0% |
| !!! | GACTGGCTGGTCTTTTGGCT+CGG | + | chr1.2:28304133-28304152 | None:intergenic | 55.0% |
| CGCAATGACCGCAGTGTGTC+TGG | + | chr1.2:28305356-28305375 | None:intergenic | 60.0% | |
| GACGCAGAGTCCGTATCAGC+AGG | - | chr1.2:28305511-28305530 | MS.gene53545:CDS | 60.0% | |
| GATGTCTGCTGCCTGCCATC+TGG | + | chr1.2:28306305-28306324 | None:intergenic | 60.0% | |
| GCGTGCAGTGTTGTGTCCGT+GGG | - | chr1.2:28304664-28304683 | MS.gene53545:CDS | 60.0% | |
| GCTATCTGCGCAGGTCTTGC+AGG | - | chr1.2:28303838-28303857 | MS.gene53545:CDS | 60.0% | |
| ! | GCAGGGCCTGATGAGAGTAC+AGG | + | chr1.2:28303733-28303752 | None:intergenic | 60.0% |
| GGCGTGCAGTGTTGTGTCCG+TGG | - | chr1.2:28304663-28304682 | MS.gene53545:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 28303198 | 28306334 | 28303198 | ID=MS.gene53545 |
| chr1.2 | mRNA | 28303198 | 28306334 | 28303198 | ID=MS.gene53545.t1;Parent=MS.gene53545 |
| chr1.2 | exon | 28306245 | 28306334 | 28306245 | ID=MS.gene53545.t1.exon1;Parent=MS.gene53545.t1 |
| chr1.2 | CDS | 28306245 | 28306334 | 28306245 | ID=cds.MS.gene53545.t1;Parent=MS.gene53545.t1 |
| chr1.2 | exon | 28305673 | 28305826 | 28305673 | ID=MS.gene53545.t1.exon2;Parent=MS.gene53545.t1 |
| chr1.2 | CDS | 28305673 | 28305826 | 28305673 | ID=cds.MS.gene53545.t1;Parent=MS.gene53545.t1 |
| chr1.2 | exon | 28304426 | 28305552 | 28304426 | ID=MS.gene53545.t1.exon3;Parent=MS.gene53545.t1 |
| chr1.2 | CDS | 28304426 | 28305552 | 28304426 | ID=cds.MS.gene53545.t1;Parent=MS.gene53545.t1 |
| chr1.2 | exon | 28303791 | 28304258 | 28303791 | ID=MS.gene53545.t1.exon4;Parent=MS.gene53545.t1 |
| chr1.2 | CDS | 28303791 | 28304258 | 28303791 | ID=cds.MS.gene53545.t1;Parent=MS.gene53545.t1 |
| chr1.2 | exon | 28303198 | 28303431 | 28303198 | ID=MS.gene53545.t1.exon5;Parent=MS.gene53545.t1 |
| chr1.2 | CDS | 28303198 | 28303431 | 28303198 | ID=cds.MS.gene53545.t1;Parent=MS.gene53545.t1 |
| Gene Sequence |
| Protein sequence |
