Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55801.t1 | XP_013447202.1 | 99 | 105 | 1 | 0 | 1 | 105 | 175 | 279 | 1.20E-56 | 229.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55801.t1 | A0A072TUM6 | 99.0 | 105 | 1 | 0 | 1 | 105 | 175 | 279 | 8.8e-57 | 229.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049147 | MS.gene55801 | 0.821079 | 4.88E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene55801 | -0.812845 | 3.45E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene55801 | 0.809674 | 1.68E-50 | -1.69E-46 |
| MS.gene050353 | MS.gene55801 | 0.845018 | 5.27E-59 | -1.69E-46 |
| MS.gene050354 | MS.gene55801 | 0.81509 | 1.10E-51 | -1.69E-46 |
| MS.gene050380 | MS.gene55801 | 0.814499 | 1.49E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene55801 | 0.821536 | 3.83E-53 | -1.69E-46 |
| MS.gene051113 | MS.gene55801 | 0.810706 | 1.01E-50 | -1.69E-46 |
| MS.gene05141 | MS.gene55801 | 0.816398 | 5.64E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene55801 | -0.809166 | 2.16E-50 | -1.69E-46 |
| MS.gene052898 | MS.gene55801 | 0.803273 | 3.77E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene55801 | 0.80101 | 1.10E-48 | -1.69E-46 |
| MS.gene053488 | MS.gene55801 | 0.808827 | 2.56E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene55801 | 0.846721 | 1.82E-59 | -1.69E-46 |
| MS.gene054708 | MS.gene55801 | 0.809194 | 2.13E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene55801 | 0.820701 | 5.97E-53 | -1.69E-46 |
| MS.gene056942 | MS.gene55801 | -0.81016 | 1.32E-50 | -1.69E-46 |
| MS.gene058093 | MS.gene55801 | 0.810086 | 1.37E-50 | -1.69E-46 |
| MS.gene058840 | MS.gene55801 | 0.88277 | 7.88E-71 | -1.69E-46 |
| MS.gene059223 | MS.gene55801 | 0.805893 | 1.07E-49 | -1.69E-46 |
| MS.gene060205 | MS.gene55801 | 0.81032 | 1.22E-50 | -1.69E-46 |
| MS.gene060578 | MS.gene55801 | 0.801128 | 1.04E-48 | -1.69E-46 |
| MS.gene06074 | MS.gene55801 | 0.999026 | 1.35E-286 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55801.t1 | MTR_8g099495 | 99.048 | 105 | 1 | 0 | 1 | 105 | 175 | 279 | 1.99e-73 | 225 |
| MS.gene55801.t1 | MTR_8g099515 | 43.011 | 93 | 48 | 3 | 17 | 104 | 174 | 266 | 2.62e-16 | 74.7 |
| MS.gene55801.t1 | MTR_3g091200 | 31.897 | 116 | 65 | 4 | 3 | 104 | 145 | 260 | 7.97e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55801.t1 | AT5G53110 | 29.412 | 102 | 61 | 2 | 14 | 104 | 157 | 258 | 3.74e-11 | 59.7 |
Find 42 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGTCCTCAATACTTCATT+TGG | 0.314741 | 4.3:+4552975 | None:intergenic |
| AAGAGACGAATTGGTTGTTT+TGG | 0.346013 | 4.3:-4554289 | MS.gene55801:CDS |
| GAGGAAGATGTGGATTGGTT+GGG | 0.360207 | 4.3:-4554199 | MS.gene55801:CDS |
| ATCTTCCACTTTCACCAAGC+TGG | 0.369581 | 4.3:+4553048 | None:intergenic |
| CTTTCAAGGAAAGTCAAGTA+TGG | 0.374180 | 4.3:-4553263 | MS.gene55801:CDS |
| GTATGGTTTAAGCCTAGGTT+TGG | 0.409546 | 4.3:-4553246 | MS.gene55801:CDS |
| TATGGTTTAAGCCTAGGTTT+GGG | 0.424366 | 4.3:-4553245 | MS.gene55801:CDS |
| GCTTCACAATTTCCACAATC+AGG | 0.434686 | 4.3:+4554227 | None:intergenic |
| TCTTCCACTTTCACCAAGCT+GGG | 0.464098 | 4.3:+4553049 | None:intergenic |
| AGCCTAGGTTTGGGAATACC+TGG | 0.477958 | 4.3:-4553236 | MS.gene55801:CDS |
| GGAGGAAGATGTGGATTGGT+TGG | 0.478263 | 4.3:-4554200 | MS.gene55801:CDS |
| TACCGGTGGAAGAGACGAAT+TGG | 0.478685 | 4.3:-4554298 | MS.gene55801:CDS |
| GTCAAGTATGGTTTAAGCCT+AGG | 0.480880 | 4.3:-4553251 | MS.gene55801:CDS |
| GTCTGCATGTAGGTCTTTCA+AGG | 0.481860 | 4.3:-4553277 | MS.gene55801:intron |
| AGGAAGATGTGGATTGGTTG+GGG | 0.491695 | 4.3:-4554198 | MS.gene55801:CDS |
| AAAACCCAGCTTGGTGAAAG+TGG | 0.493961 | 4.3:-4553053 | MS.gene55801:CDS |
| TTGGGAATACCTGGACTCCT+AGG | 0.494340 | 4.3:-4553227 | MS.gene55801:intron |
| ATTGACTATTTCACCTTGGG+TGG | 0.497251 | 4.3:+4554142 | None:intergenic |
| CAAATGTTGTCACTTGGCCT+AGG | 0.507133 | 4.3:+4553023 | None:intergenic |
| GATGTCCACGGTGTAGCAAA+AGG | 0.511204 | 4.3:+4554350 | None:intergenic |
| GAACATGAATTATTCGATTG+TGG | 0.526227 | 4.3:-4554390 | None:intergenic |
| TATTTCGTCAGCTTTGATAC+CGG | 0.536087 | 4.3:-4554315 | MS.gene55801:CDS |
| AACCAATTCGTCTCTTCCAC+CGG | 0.549752 | 4.3:+4554296 | None:intergenic |
| ACAATTAGACCTAGGAGTCC+AGG | 0.561924 | 4.3:+4553218 | None:intergenic |
| TTCAAACATACCGTTGCAGT+GGG | 0.575801 | 4.3:-4554255 | MS.gene55801:CDS |
| TGTTATGATCTTCCCACCCA+AGG | 0.578358 | 4.3:-4554155 | MS.gene55801:intron |
| ATCAGCCAAATGAAGTATTG+AGG | 0.579109 | 4.3:-4552980 | None:intergenic |
| AGATACCCTAAAACCCAGCT+TGG | 0.586664 | 4.3:-4553062 | MS.gene55801:CDS |
| ATTCAAACATACCGTTGCAG+TGG | 0.592135 | 4.3:-4554256 | MS.gene55801:CDS |
| CAGTGGGATGATCCTGATTG+TGG | 0.594321 | 4.3:-4554239 | MS.gene55801:CDS |
| TTCGTCAGCTTTGATACCGG+TGG | 0.597171 | 4.3:-4554312 | MS.gene55801:CDS |
| TTGACTATTTCACCTTGGGT+GGG | 0.599087 | 4.3:+4554143 | None:intergenic |
| GTGAAAGTGGAAGATTGCCT+AGG | 0.611829 | 4.3:-4553040 | MS.gene55801:CDS |
| ATAGAGCAAATGTTGTCACT+TGG | 0.619697 | 4.3:+4553017 | None:intergenic |
| AATTCACATAATGATGTCCA+CGG | 0.636628 | 4.3:+4554338 | None:intergenic |
| TCAGGATCATCCCACTGCAA+CGG | 0.649351 | 4.3:+4554245 | None:intergenic |
| GAAGCACGTGGAGGAAGATG+TGG | 0.650882 | 4.3:-4554209 | MS.gene55801:CDS |
| ACGTGGAGGAAGATGTGGAT+TGG | 0.656368 | 4.3:-4554204 | MS.gene55801:CDS |
| GTCCACGGTGTAGCAAAAGG+AGG | 0.695275 | 4.3:+4554353 | None:intergenic |
| GTCCAGGTATTCCCAAACCT+AGG | 0.704709 | 4.3:+4553234 | None:intergenic |
| TGTGGAAATTGTGAAGCACG+TGG | 0.742242 | 4.3:-4554221 | MS.gene55801:CDS |
| GGAAATTGTGAAGCACGTGG+AGG | 0.769055 | 4.3:-4554218 | MS.gene55801:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATCAAAATAGATA+CGG | - | chr4.3:4553380-4553399 | MS.gene55801:intron | 10.0% |
| !! | AAAAAACATGAAGTTTAATT+TGG | - | chr4.3:4553487-4553506 | MS.gene55801:intron | 15.0% |
| !! | AACAAGTTATGTAATTAATT+AGG | + | chr4.3:4554039-4554058 | None:intergenic | 15.0% |
| !!! | TTTGATATTTTTTTTTTCCA+AGG | + | chr4.3:4553373-4553392 | None:intergenic | 15.0% |
| !! | AAAATCAAATCAAACAAATG+CGG | - | chr4.3:4553529-4553548 | MS.gene55801:intron | 20.0% |
| !! | ACATTTGATTCAAATGTATT+TGG | + | chr4.3:4553672-4553691 | None:intergenic | 20.0% |
| !!! | TCATGTTTTTTTTTATCTTG+CGG | + | chr4.3:4553478-4553497 | None:intergenic | 20.0% |
| !!! | TGCAAATTTAGATCATATTT+TGG | - | chr4.3:4553273-4553292 | MS.gene55801:intron | 20.0% |
| !!! | TTTGGTTTTCTTTTAACTTT+TGG | - | chr4.3:4553291-4553310 | MS.gene55801:intron | 20.0% |
| ! | TGTAATTAATTAGGATCCTT+AGG | + | chr4.3:4554030-4554049 | None:intergenic | 25.0% |
| !!! | AATAGTTGTGTTGTTTTCAT+TGG | + | chr4.3:4553768-4553787 | None:intergenic | 25.0% |
| !!! | AGTTTCAATTTGGATTAGTT+CGG | - | chr4.3:4553701-4553720 | MS.gene55801:intron | 25.0% |
| !!! | ATAGTTGTGTTGTTTTCATT+GGG | + | chr4.3:4553767-4553786 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGTGTGTTTAGCT+CGG | - | chr4.3:4553585-4553604 | MS.gene55801:intron | 25.0% |
| !!! | TTTGGTTTTGTTTGATTTTG+AGG | - | chr4.3:4553435-4553454 | MS.gene55801:intron | 25.0% |
| !!! | TTTTTTTTCCAAGGACTATT+TGG | + | chr4.3:4553364-4553383 | None:intergenic | 25.0% |
| AACTAAACGATTGTGTTTCA+TGG | + | chr4.3:4553815-4553834 | None:intergenic | 30.0% | |
| AAGACCCATAACAAAAATTG+GGG | + | chr4.3:4554268-4554287 | None:intergenic | 30.0% | |
| AATTCACATAATGATGTCCA+CGG | + | chr4.3:4553033-4553052 | None:intergenic | 30.0% | |
| AGAAATATCCAAATAGTCCT+TGG | - | chr4.3:4553353-4553372 | MS.gene55801:intron | 30.0% | |
| ATGTAAACACAATTAGACCT+AGG | + | chr4.3:4554161-4554180 | None:intergenic | 30.0% | |
| CAAGACCCATAACAAAAATT+GGG | + | chr4.3:4554269-4554288 | None:intergenic | 30.0% | |
| TAGGTCTAATTGTGTTTACA+TGG | - | chr4.3:4554160-4554179 | MS.gene55801:CDS | 30.0% | |
| TATGCAAAAAGAAGAACACA+AGG | - | chr4.3:4554187-4554206 | MS.gene55801:CDS | 30.0% | |
| TCAAGACCCATAACAAAAAT+TGG | + | chr4.3:4554270-4554289 | None:intergenic | 30.0% | |
| TGAAACACAATCGTTTAGTT+TGG | - | chr4.3:4553815-4553834 | MS.gene55801:intron | 30.0% | |
| TTGAAAATTCAGTGCTTGTT+TGG | + | chr4.3:4554227-4554246 | None:intergenic | 30.0% | |
| ! | ATCATTGACTATTTCACCTT+GGG | + | chr4.3:4553232-4553251 | None:intergenic | 30.0% |
| ! | GAAACACAATCGTTTAGTTT+GGG | - | chr4.3:4553816-4553835 | MS.gene55801:intron | 30.0% |
| ! | TTCTTTTCCGTTGTTCTTTT+GGG | - | chr4.3:4554068-4554087 | MS.gene55801:intron | 30.0% |
| ! | TTTCTTTTCCGTTGTTCTTT+TGG | - | chr4.3:4554067-4554086 | MS.gene55801:intron | 30.0% |
| !! | TCGTTTTTGCAGTTTCAATT+TGG | - | chr4.3:4553691-4553710 | MS.gene55801:intron | 30.0% |
| !!! | ATTCATAGTGCATTTTGGTT+TGG | - | chr4.3:4553417-4553436 | MS.gene55801:intron | 30.0% |
| !!! | GTTTTTCTATTGTGTTGGTT+TGG | - | chr4.3:4553730-4553749 | MS.gene55801:intron | 30.0% |
| !!! | TAGTTGTGTTGTTTTCATTG+GGG | + | chr4.3:4553766-4553785 | None:intergenic | 30.0% |
| AATCTCCACTATAAGTCCTA+AGG | - | chr4.3:4554011-4554030 | MS.gene55801:intron | 35.0% | |
| AGACCCATAACAAAAATTGG+GGG | + | chr4.3:4554267-4554286 | None:intergenic | 35.0% | |
| ATAGAGCAAATGTTGTCACT+TGG | + | chr4.3:4554354-4554373 | None:intergenic | 35.0% | |
| CAAATCAAACAAATGCGGTT+TGG | - | chr4.3:4553534-4553553 | MS.gene55801:intron | 35.0% | |
| CTTTCAAGGAAAGTCAAGTA+TGG | - | chr4.3:4554105-4554124 | MS.gene55801:intron | 35.0% | |
| TATGGTTTAAGCCTAGGTTT+GGG | - | chr4.3:4554123-4554142 | MS.gene55801:intron | 35.0% | |
| ! | AAGAGACGAATTGGTTGTTT+TGG | - | chr4.3:4553079-4553098 | MS.gene55801:intron | 35.0% |
| ! | CATCATTGACTATTTCACCT+TGG | + | chr4.3:4553233-4553252 | None:intergenic | 35.0% |
| ! | TATTTCGTCAGCTTTGATAC+CGG | - | chr4.3:4553053-4553072 | MS.gene55801:CDS | 35.0% |
| ! | TCTTTTCCGTTGTTCTTTTG+GGG | - | chr4.3:4554069-4554088 | MS.gene55801:intron | 35.0% |
| !! | GAGGTATTCATAGTGCATTT+TGG | - | chr4.3:4553412-4553431 | MS.gene55801:intron | 35.0% |
| !! | TTTTGTTATGGGTCTTGACA+GGG | - | chr4.3:4554272-4554291 | MS.gene55801:CDS | 35.0% |
| !! | TTTTTGTTATGGGTCTTGAC+AGG | - | chr4.3:4554271-4554290 | MS.gene55801:CDS | 35.0% |
| !!! | AGTTGTGTTGTTTTCATTGG+GGG | + | chr4.3:4553765-4553784 | None:intergenic | 35.0% |
| AGGATCCTTAGGACTTATAG+TGG | + | chr4.3:4554019-4554038 | None:intergenic | 40.0% | |
| ATTCAAACATACCGTTGCAG+TGG | - | chr4.3:4553112-4553131 | MS.gene55801:intron | 40.0% | |
| ATTGACTATTTCACCTTGGG+TGG | + | chr4.3:4553229-4553248 | None:intergenic | 40.0% | |
| GACCCATAACAAAAATTGGG+GGG | + | chr4.3:4554266-4554285 | None:intergenic | 40.0% | |
| GCAAATTGAACTGAACCATG+CGG | - | chr4.3:4553626-4553645 | MS.gene55801:intron | 40.0% | |
| GCATGGTTCAGTTCAATTTG+CGG | + | chr4.3:4553627-4553646 | None:intergenic | 40.0% | |
| GCTTCACAATTTCCACAATC+AGG | + | chr4.3:4553144-4553163 | None:intergenic | 40.0% | |
| GTATGGTTTAAGCCTAGGTT+TGG | - | chr4.3:4554122-4554141 | MS.gene55801:intron | 40.0% | |
| GTCAAGTATGGTTTAAGCCT+AGG | - | chr4.3:4554117-4554136 | MS.gene55801:intron | 40.0% | |
| GTCTACATTTGCAACTACAG+CGG | - | chr4.3:4553838-4553857 | MS.gene55801:intron | 40.0% | |
| TTCAAACATACCGTTGCAGT+GGG | - | chr4.3:4553113-4553132 | MS.gene55801:intron | 40.0% | |
| TTGACTATTTCACCTTGGGT+GGG | + | chr4.3:4553228-4553247 | None:intergenic | 40.0% | |
| ! | TCGCGGTTTTTCTATTGTGT+TGG | - | chr4.3:4553725-4553744 | MS.gene55801:intron | 40.0% |
| ! | TTTCACCAAGCTGGGTTTTA+GGG | + | chr4.3:4554314-4554333 | None:intergenic | 40.0% |
| !! | ATTTGGATTAGTTCGGTTCG+CGG | - | chr4.3:4553708-4553727 | MS.gene55801:intron | 40.0% |
| !! | CAAACAAATGCGGTTTGGTT+TGG | - | chr4.3:4553539-4553558 | MS.gene55801:intron | 40.0% |
| !! | CACCCCCCAATTTTTGTTAT+GGG | - | chr4.3:4554261-4554280 | MS.gene55801:CDS | 40.0% |
| !!! | CTTTTTTTTACTCAGCCGCA+TGG | + | chr4.3:4553644-4553663 | None:intergenic | 40.0% |
| AACCAATTCGTCTCTTCCAC+CGG | + | chr4.3:4553075-4553094 | None:intergenic | 45.0% | |
| ACAATTAGACCTAGGAGTCC+AGG | + | chr4.3:4554153-4554172 | None:intergenic | 45.0% | |
| AGATACCCTAAAACCCAGCT+TGG | - | chr4.3:4554306-4554325 | MS.gene55801:CDS | 45.0% | |
| ATAGATACGGCGAGAACTAG+AGG | - | chr4.3:4553393-4553412 | MS.gene55801:intron | 45.0% | |
| ATCTTCCACTTTCACCAAGC+TGG | + | chr4.3:4554323-4554342 | None:intergenic | 45.0% | |
| GTCTGCATGTAGGTCTTTCA+AGG | - | chr4.3:4554091-4554110 | MS.gene55801:intron | 45.0% | |
| GTGAAAGTGGAAGATTGCCT+AGG | - | chr4.3:4554328-4554347 | MS.gene55801:CDS | 45.0% | |
| TCTTCCACTTTCACCAAGCT+GGG | + | chr4.3:4554322-4554341 | None:intergenic | 45.0% | |
| TGCAGACCCCAAAAGAACAA+CGG | + | chr4.3:4554078-4554097 | None:intergenic | 45.0% | |
| TGTGGAAATTGTGAAGCACG+TGG | - | chr4.3:4553147-4553166 | MS.gene55801:intron | 45.0% | |
| TGTTATGATCTTCCCACCCA+AGG | - | chr4.3:4553213-4553232 | MS.gene55801:intron | 45.0% | |
| ! | AAAACCCAGCTTGGTGAAAG+TGG | - | chr4.3:4554315-4554334 | MS.gene55801:CDS | 45.0% |
| ! | CAAATGTTGTCACTTGGCCT+AGG | + | chr4.3:4554348-4554367 | None:intergenic | 45.0% |
| ! | CTTTCACCAAGCTGGGTTTT+AGG | + | chr4.3:4554315-4554334 | None:intergenic | 45.0% |
| ! | GCACCCCCCAATTTTTGTTA+TGG | - | chr4.3:4554260-4554279 | MS.gene55801:CDS | 45.0% |
| !! | AGGAAGATGTGGATTGGTTG+GGG | - | chr4.3:4553170-4553189 | MS.gene55801:intron | 45.0% |
| !! | GAGGAAGATGTGGATTGGTT+GGG | - | chr4.3:4553169-4553188 | MS.gene55801:intron | 45.0% |
| !! | GCGGTTTGGTTTGGTTGTTA+CGG | - | chr4.3:4553548-4553567 | MS.gene55801:intron | 45.0% |
| !!! | TTCTTTTGGGGTCTGCATGT+AGG | - | chr4.3:4554081-4554100 | MS.gene55801:intron | 45.0% |
| ACGTGGAGGAAGATGTGGAT+TGG | - | chr4.3:4553164-4553183 | MS.gene55801:intron | 50.0% | |
| AGCCTAGGTTTGGGAATACC+TGG | - | chr4.3:4554132-4554151 | MS.gene55801:intron | 50.0% | |
| CAGTGGGATGATCCTGATTG+TGG | - | chr4.3:4553129-4553148 | MS.gene55801:intron | 50.0% | |
| GATGTCCACGGTGTAGCAAA+AGG | + | chr4.3:4553021-4553040 | None:intergenic | 50.0% | |
| GGAAATTGTGAAGCACGTGG+AGG | - | chr4.3:4553150-4553169 | MS.gene55801:intron | 50.0% | |
| GTCCAGGTATTCCCAAACCT+AGG | + | chr4.3:4554137-4554156 | None:intergenic | 50.0% | |
| TACCGGTGGAAGAGACGAAT+TGG | - | chr4.3:4553070-4553089 | MS.gene55801:CDS | 50.0% | |
| TCAGGATCATCCCACTGCAA+CGG | + | chr4.3:4553126-4553145 | None:intergenic | 50.0% | |
| TTGGGAATACCTGGACTCCT+AGG | - | chr4.3:4554141-4554160 | MS.gene55801:intron | 50.0% | |
| ! | ATCCTCCTTTTGCTACACCG+TGG | - | chr4.3:4553013-4553032 | MS.gene55801:CDS | 50.0% |
| ! | TGGGGGGTGCGTCATAATAA+AGG | + | chr4.3:4554250-4554269 | None:intergenic | 50.0% |
| ! | TTCGTCAGCTTTGATACCGG+TGG | - | chr4.3:4553056-4553075 | MS.gene55801:CDS | 50.0% |
| !! | GGAGGAAGATGTGGATTGGT+TGG | - | chr4.3:4553168-4553187 | MS.gene55801:intron | 50.0% |
| GAAGCACGTGGAGGAAGATG+TGG | - | chr4.3:4553159-4553178 | MS.gene55801:intron | 55.0% | |
| GTCCACGGTGTAGCAAAAGG+AGG | + | chr4.3:4553018-4553037 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 4552982 | 4554408 | 4552982 | ID=MS.gene55801 |
| chr4.3 | mRNA | 4552982 | 4554408 | 4552982 | ID=MS.gene55801.t1;Parent=MS.gene55801 |
| chr4.3 | exon | 4554156 | 4554408 | 4554156 | ID=MS.gene55801.t1.exon1;Parent=MS.gene55801.t1 |
| chr4.3 | CDS | 4554156 | 4554408 | 4554156 | ID=cds.MS.gene55801.t1;Parent=MS.gene55801.t1 |
| chr4.3 | exon | 4553228 | 4553287 | 4553228 | ID=MS.gene55801.t1.exon2;Parent=MS.gene55801.t1 |
| chr4.3 | CDS | 4553228 | 4553287 | 4553228 | ID=cds.MS.gene55801.t1;Parent=MS.gene55801.t1 |
| chr4.3 | exon | 4552982 | 4553097 | 4552982 | ID=MS.gene55801.t1.exon3;Parent=MS.gene55801.t1 |
| chr4.3 | CDS | 4552982 | 4553097 | 4552982 | ID=cds.MS.gene55801.t1;Parent=MS.gene55801.t1 |
| Gene Sequence |
| Protein sequence |
