Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57107.t1 | XP_024642404.1 | 93.7 | 457 | 18 | 1 | 1 | 446 | 1 | 457 | 2.20E-213 | 751.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57107.t1 | P9WLH5 | 33.8 | 139 | 83 | 2 | 308 | 445 | 1 | 131 | 1.6e-10 | 68.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57107.t1 | A0A396HB38 | 93.7 | 457 | 18 | 1 | 1 | 446 | 1 | 457 | 1.6e-213 | 751.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene57107.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene57107 | 0.807757 | 4.33E-50 | -1.69E-46 |
| MS.gene049159 | MS.gene57107 | 0.818942 | 1.51E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene57107 | 0.814049 | 1.88E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene57107 | 0.811939 | 5.45E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene57107 | 0.801328 | 9.48E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene57107 | 0.816937 | 4.27E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene57107 | 0.822761 | 1.99E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene57107 | 0.806947 | 6.42E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene57107 | 0.82359 | 1.28E-53 | -1.69E-46 |
| MS.gene050844 | MS.gene57107 | 0.818247 | 2.17E-52 | -1.69E-46 |
| MS.gene051210 | MS.gene57107 | 0.814851 | 1.25E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene57107 | 0.826152 | 3.17E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene57107 | 0.819496 | 1.13E-52 | -1.69E-46 |
| MS.gene051935 | MS.gene57107 | 0.823617 | 1.26E-53 | -1.69E-46 |
| MS.gene052020 | MS.gene57107 | 0.813498 | 2.48E-51 | -1.69E-46 |
| MS.gene052323 | MS.gene57107 | 0.812087 | 5.06E-51 | -1.69E-46 |
| MS.gene052384 | MS.gene57107 | 0.811333 | 7.38E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene57107 | 0.808333 | 3.26E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene57107 | 0.825012 | 5.91E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene57107 | 0.825363 | 4.88E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene57107 | 0.823803 | 1.14E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene57107 | 0.838533 | 2.72E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene57107 | 0.820621 | 6.23E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene57107 | 0.81102 | 8.63E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene57107 | 0.831386 | 1.72E-55 | -1.69E-46 |
| MS.gene05468 | MS.gene57107 | 0.817455 | 3.27E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene57107 | 0.812194 | 4.79E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene57107 | 0.818347 | 2.06E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene57107 | 0.801859 | 7.38E-49 | -1.69E-46 |
| MS.gene056373 | MS.gene57107 | 0.81155 | 6.62E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene57107 | 0.810594 | 1.07E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene57107 | 0.83718 | 6.05E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene57107 | 0.81133 | 7.39E-51 | -1.69E-46 |
| MS.gene057980 | MS.gene57107 | 0.802977 | 4.34E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene57107 | 0.816341 | 5.81E-52 | -1.69E-46 |
| MS.gene058636 | MS.gene57107 | 0.807894 | 4.04E-50 | -1.69E-46 |
| MS.gene059249 | MS.gene57107 | 0.804284 | 2.33E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene57107 | 0.814691 | 1.35E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene57107 | 0.811146 | 8.10E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene57107 | 0.824791 | 6.67E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57107.t1 | MTR_0856s0010 | 61.310 | 168 | 51 | 4 | 36 | 199 | 2 | 159 | 2.40e-62 | 199 |
| MS.gene57107.t1 | MTR_7g115320 | 48.485 | 66 | 31 | 1 | 161 | 226 | 6 | 68 | 2.34e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57107.t1 | AT3G01410 | 46.528 | 144 | 69 | 1 | 303 | 446 | 148 | 283 | 1.58e-30 | 120 |
| MS.gene57107.t1 | AT3G01410 | 46.528 | 144 | 69 | 1 | 303 | 446 | 148 | 283 | 1.58e-30 | 120 |
| MS.gene57107.t1 | AT5G51080 | 45.324 | 139 | 68 | 1 | 309 | 447 | 122 | 252 | 9.93e-27 | 108 |
| MS.gene57107.t1 | AT5G51080 | 45.324 | 139 | 68 | 1 | 309 | 447 | 185 | 315 | 3.68e-26 | 108 |
| MS.gene57107.t1 | AT5G51080 | 45.324 | 139 | 68 | 1 | 309 | 447 | 185 | 315 | 3.68e-26 | 108 |
| MS.gene57107.t1 | AT1G24090 | 44.000 | 150 | 74 | 2 | 299 | 446 | 204 | 345 | 5.84e-25 | 105 |
Find 90 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGGATAGTTCAAAGAATT+TGG | 0.188161 | 6.2:+3805044 | None:intergenic |
| CCCACATCTCGTTTGCAAAA+TGG | 0.190562 | 6.2:-3805708 | None:intergenic |
| TGGAGAGTATGCTTTGAAAA+AGG | 0.195927 | 6.2:+3805320 | MS.gene57107:CDS |
| GAGTATCGGGCTTTACTCTT+AGG | 0.200750 | 6.2:+3808002 | MS.gene57107:CDS |
| TATGTTCCTTTGTAGCTCTA+TGG | 0.232618 | 6.2:+3807939 | MS.gene57107:intron |
| TTGAACAATCTTCCCTTTGC+AGG | 0.266353 | 6.2:-3805564 | None:intergenic |
| GAAATTATGTGCTGAGGCTT+TGG | 0.322454 | 6.2:+3808482 | MS.gene57107:CDS |
| CTCCTGGATCATCAGTGCTT+TGG | 0.328920 | 6.2:-3805626 | None:intergenic |
| TCCGCATCCAACACATTTCC+AGG | 0.335217 | 6.2:+3808529 | MS.gene57107:CDS |
| CTCGGAACTTGTTATCAATC+AGG | 0.350472 | 6.2:+3808076 | MS.gene57107:CDS |
| GCACGTTGGAAGCCTGAAAC+AGG | 0.364470 | 6.2:+3805258 | MS.gene57107:CDS |
| CAACCTCTTGTTAAAGATGT+AGG | 0.366945 | 6.2:+3805669 | MS.gene57107:CDS |
| ATGTTTAAGGAACGTAACTA+TGG | 0.371416 | 6.2:+3808978 | MS.gene57107:intron |
| CTTTCTTGTATCCTTGAGTT+TGG | 0.375582 | 6.2:+3807744 | MS.gene57107:CDS |
| ATGTTCCTTTGTAGCTCTAT+GGG | 0.375904 | 6.2:+3807940 | MS.gene57107:intron |
| ACATCAAGAAAAGGAGATAA+TGG | 0.382507 | 6.2:+3805363 | MS.gene57107:CDS |
| TTCCAACTTAATGCAAATCT+TGG | 0.384721 | 6.2:-3805484 | None:intergenic |
| GAAGATTGTTCAAGGCTAAC+AGG | 0.389692 | 6.2:+3805574 | MS.gene57107:CDS |
| GCTTGCTGAAGATGGATATC+TGG | 0.391535 | 6.2:+3807839 | MS.gene57107:CDS |
| CTATGGGTTTCGCCAAGGAC+TGG | 0.394553 | 6.2:+3807956 | MS.gene57107:CDS |
| TGAGTTTGGCGGTGTATCCA+TGG | 0.404103 | 6.2:+3807758 | MS.gene57107:CDS |
| GATGCCTTTGGTACGCTTCA+AGG | 0.415125 | 6.2:+3806088 | MS.gene57107:CDS |
| TACAAGGAACGACATGCAAT+TGG | 0.415503 | 6.2:+3805741 | MS.gene57107:CDS |
| AACAAGTTCCGAGTCTCCTT+TGG | 0.419868 | 6.2:-3808066 | None:intergenic |
| GAAGCGAATAAGTGAAAGAA+TGG | 0.425911 | 6.2:+3806000 | MS.gene57107:CDS |
| GAGTTTGGCGGTGTATCCAT+GGG | 0.427150 | 6.2:+3807759 | MS.gene57107:CDS |
| AAAAGAGTCCGCTGAGTATC+GGG | 0.427646 | 6.2:+3807989 | MS.gene57107:CDS |
| GCTTTACTGCTTGCTGAAGA+TGG | 0.428408 | 6.2:+3807831 | MS.gene57107:CDS |
| GGTCTAACCATTGAGATTGA+TGG | 0.430662 | 6.2:-3809024 | None:intergenic |
| AACTTAATGCAAATCTTGGC+TGG | 0.446598 | 6.2:-3805480 | None:intergenic |
| AGTATCGGGCTTTACTCTTA+GGG | 0.446841 | 6.2:+3808003 | MS.gene57107:CDS |
| TTGTTTGGTGACCCAGTCCT+TGG | 0.447831 | 6.2:-3807968 | None:intergenic |
| AACCATTGAGATTGATGGCC+CGG | 0.448402 | 6.2:-3809019 | None:intergenic |
| AGCCAAGATTTGCATTAAGT+TGG | 0.449507 | 6.2:+3805482 | MS.gene57107:CDS |
| TGCAACAGATTCTGGATCCC+TGG | 0.450769 | 6.2:+3808436 | MS.gene57107:intron |
| GTCTTCTTGATCCTCACTCC+TGG | 0.453631 | 6.2:-3805642 | None:intergenic |
| GAGCTGTTCGTAATGCAAAC+CGG | 0.456358 | 6.2:+3809000 | MS.gene57107:CDS |
| CAAAAGAGTCCGCTGAGTAT+CGG | 0.473133 | 6.2:+3807988 | MS.gene57107:CDS |
| AACATTAATCGTGGACCAGC+AGG | 0.474775 | 6.2:+3807801 | MS.gene57107:CDS |
| TATGGGTTTCGCCAAGGACT+GGG | 0.476797 | 6.2:+3807957 | MS.gene57107:CDS |
| TTTCTCACCTGTTGTTTCGT+TGG | 0.486096 | 6.2:-3806142 | None:intergenic |
| TCTTGTATCCTTGAGTTTGG+CGG | 0.487937 | 6.2:+3807747 | MS.gene57107:CDS |
| AATCGAATCACAGATGCCTT+TGG | 0.490469 | 6.2:+3806076 | MS.gene57107:CDS |
| CAGGGCTAGTCTCGTGAGAA+TGG | 0.497072 | 6.2:-3805545 | None:intergenic |
| AGTTGGAAGACGATGGTTTG+TGG | 0.499523 | 6.2:+3805499 | MS.gene57107:CDS |
| TCAAAGAATTTGGTAGATTG+TGG | 0.500305 | 6.2:+3805054 | MS.gene57107:CDS |
| AAGATTAGAACATCAAGAAA+AGG | 0.501587 | 6.2:+3805354 | MS.gene57107:CDS |
| CGACATGCAATTGGAAAAGA+AGG | 0.505598 | 6.2:+3805750 | MS.gene57107:CDS |
| TGCAAAGGGAAGATTGTTCA+AGG | 0.507962 | 6.2:+3805566 | MS.gene57107:CDS |
| TTTAAGTATGTTACTGCCAA+AGG | 0.514586 | 6.2:+3808050 | MS.gene57107:CDS |
| AACTTGCGATTGAGTACCAT+GGG | 0.516525 | 6.2:-3806116 | None:intergenic |
| AGTTAAACCAACGAAACAAC+AGG | 0.521052 | 6.2:+3806135 | MS.gene57107:CDS |
| AATCGTGGACCAGCAGGTGC+AGG | 0.529975 | 6.2:+3807807 | MS.gene57107:CDS |
| GATAACTCTAATGATAATGA+AGG | 0.530992 | 6.2:+3805138 | MS.gene57107:CDS |
| GATAACTCTAATGATAATGA+AGG | 0.530992 | 6.2:+3805171 | MS.gene57107:CDS |
| ATGCCTTTGGTACGCTTCAA+GGG | 0.531070 | 6.2:+3806089 | MS.gene57107:CDS |
| AAAATACCCTGGAAATGTGT+TGG | 0.533351 | 6.2:-3808536 | None:intergenic |
| TTGAAACATGCGAGTATGAA+AGG | 0.534654 | 6.2:+3808026 | MS.gene57107:CDS |
| TGAACAATCTTCCCTTTGCA+GGG | 0.541033 | 6.2:-3805563 | None:intergenic |
| ATCCAAAGCACTGATGATCC+AGG | 0.543376 | 6.2:+3805624 | MS.gene57107:CDS |
| TTTAAAGAAATTATGTGCTG+AGG | 0.544923 | 6.2:+3808476 | MS.gene57107:CDS |
| TAGCTCTATGGGTTTCGCCA+AGG | 0.553648 | 6.2:+3807951 | MS.gene57107:intron |
| AACCGGGCCATCAATCTCAA+TGG | 0.553661 | 6.2:+3809017 | MS.gene57107:CDS |
| TGTGGGAAATTATGTTTACA+AGG | 0.554375 | 6.2:+3805725 | MS.gene57107:CDS |
| TGTGGTACTATTCATGATGA+AGG | 0.556353 | 6.2:+3805072 | MS.gene57107:CDS |
| CACGAGACTAGCCCTGCAAA+GGG | 0.557494 | 6.2:+3805552 | MS.gene57107:CDS |
| TCACGAGACTAGCCCTGCAA+AGG | 0.558154 | 6.2:+3805551 | MS.gene57107:CDS |
| AGCTGCTAGAAAAGATAGAG+TGG | 0.558261 | 6.2:+3806038 | MS.gene57107:CDS |
| AGTAAAGCTCCTGCACCTGC+TGG | 0.558433 | 6.2:-3807816 | None:intergenic |
| GATAACTCGAATGATAATGA+AGG | 0.559715 | 6.2:+3805105 | MS.gene57107:CDS |
| TGGATACACCGCCAAACTCA+AGG | 0.570316 | 6.2:-3807755 | None:intergenic |
| AATTCTTGCTTGCTCAAGAG+AGG | 0.580330 | 6.2:+3805401 | MS.gene57107:CDS |
| TGCATTAAGTTGGAAGACGA+TGG | 0.588214 | 6.2:+3805492 | MS.gene57107:CDS |
| AGCTGTTCGTAATGCAAACC+GGG | 0.588529 | 6.2:+3809001 | MS.gene57107:CDS |
| ATTCTTGCTTGCTCAAGAGA+GGG | 0.604718 | 6.2:+3805402 | MS.gene57107:CDS |
| CCCTGGAAATGTGTTGGATG+CGG | 0.605910 | 6.2:-3808530 | None:intergenic |
| GCTCCTACATCTTTAACAAG+AGG | 0.607465 | 6.2:-3805672 | None:intergenic |
| TGTTACTGCCAAAGGAGACT+CGG | 0.617844 | 6.2:+3808058 | MS.gene57107:CDS |
| CCGCATCCAACACATTTCCA+GGG | 0.618262 | 6.2:+3808530 | MS.gene57107:CDS |
| AGACAACAACACAAGAATGA+CGG | 0.620719 | 6.2:+3805961 | MS.gene57107:intron |
| AGTTTGGCGGTGTATCCATG+GGG | 0.626952 | 6.2:+3807760 | MS.gene57107:CDS |
| TAACTTGCGATTGAGTACCA+TGG | 0.626961 | 6.2:-3806117 | None:intergenic |
| CACGTTGGAAGCCTGAAACA+GGG | 0.628231 | 6.2:+3805259 | MS.gene57107:CDS |
| ATACCCTTGAAGCGTACCAA+AGG | 0.631445 | 6.2:-3806092 | None:intergenic |
| GGTGATCTAAACATTAATCG+TGG | 0.639032 | 6.2:+3807792 | MS.gene57107:CDS |
| ACGCTTCAAGGGTATTCCCA+TGG | 0.642120 | 6.2:+3806100 | MS.gene57107:CDS |
| GCACTGATGATCCAGGAGTG+AGG | 0.654669 | 6.2:+3805631 | MS.gene57107:CDS |
| CTAATGATGATGAAGCACGT+TGG | 0.674855 | 6.2:+3805244 | MS.gene57107:CDS |
| GTTTGGCGGTGTATCCATGG+GGG | 0.709941 | 6.2:+3807761 | MS.gene57107:CDS |
| GAGTAAAGCCCGATACTCAG+CGG | 0.716233 | 6.2:-3807997 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAAATATTCATATAATT+AGG | - | chr6.2:3808878-3808897 | None:intergenic | 10.0% |
| !!! | ATGTATTTTTTTAATGTTTA+AGG | + | chr6.2:3808965-3808984 | MS.gene57107:intron | 10.0% |
| !! | AAAAAATGAAAAGTAACAAT+GGG | - | chr6.2:3808373-3808392 | None:intergenic | 15.0% |
| !! | ATTTCCAAAATATTATAGAT+TGG | + | chr6.2:3806176-3806195 | MS.gene57107:intron | 15.0% |
| !! | TAAAAAATGAAAAGTAACAA+TGG | - | chr6.2:3808374-3808393 | None:intergenic | 15.0% |
| !! | TAATATGAATTTAGAAATTC+TGG | + | chr6.2:3808780-3808799 | MS.gene57107:intron | 15.0% |
| !!! | AAATCCAATCTATAATATTT+TGG | - | chr6.2:3806183-3806202 | None:intergenic | 15.0% |
| !!! | AATTTTTATCTCTTCAATTT+TGG | + | chr6.2:3808910-3808929 | MS.gene57107:intron | 15.0% |
| !!! | TTTATAAAATTTTACTCTGA+TGG | - | chr6.2:3806623-3806642 | None:intergenic | 15.0% |
| !! | AATTAGGAGTTTAATGTTAT+TGG | - | chr6.2:3808862-3808881 | None:intergenic | 20.0% |
| !! | ATGAATATTTACATTCAGTT+CGG | + | chr6.2:3808884-3808903 | MS.gene57107:intron | 20.0% |
| !! | CAATTCAATTCAATTCAATT+GGG | + | chr6.2:3807880-3807899 | MS.gene57107:intron | 20.0% |
| !! | CATAAAATCAAATGTCTATT+GGG | - | chr6.2:3807496-3807515 | None:intergenic | 20.0% |
| !! | GAAAATTCCAAGTAATTATA+TGG | + | chr6.2:3808242-3808261 | MS.gene57107:intron | 20.0% |
| !! | TACAAAAAAAAAAAATACCC+TGG | - | chr6.2:3808550-3808569 | None:intergenic | 20.0% |
| !! | TCAATATCTAGAAAAACAAA+GGG | - | chr6.2:3807128-3807147 | None:intergenic | 20.0% |
| !! | TCATAAAATCAAATGTCTAT+TGG | - | chr6.2:3807497-3807516 | None:intergenic | 20.0% |
| !! | TTAACAATATCTAACCAATT+AGG | - | chr6.2:3808343-3808362 | None:intergenic | 20.0% |
| !! | TTCAATATCTAGAAAAACAA+AGG | - | chr6.2:3807129-3807148 | None:intergenic | 20.0% |
| !!! | AAGCTATTTTTGTAAAATGA+GGG | + | chr6.2:3805791-3805810 | MS.gene57107:intron | 20.0% |
| !!! | AGCAATTATGTTTTTAATAG+AGG | + | chr6.2:3806245-3806264 | MS.gene57107:intron | 20.0% |
| !!! | ATGTATTTTTCCTCATAATT+TGG | - | chr6.2:3807262-3807281 | None:intergenic | 20.0% |
| !!! | GATGATGTTAAAACATTTTA+TGG | + | chr6.2:3805300-3805319 | MS.gene57107:CDS | 20.0% |
| !!! | TAAGCTATTTTTGTAAAATG+AGG | + | chr6.2:3805790-3805809 | MS.gene57107:intron | 20.0% |
| !!! | TTAGAGCTTGATTTTTATTT+TGG | + | chr6.2:3806337-3806356 | MS.gene57107:intron | 20.0% |
| !!! | TTGTGTTTTTTGATTTGAAA+TGG | - | chr6.2:3807344-3807363 | None:intergenic | 20.0% |
| ! | AAATCACGCTATTAAAGAAA+TGG | - | chr6.2:3806307-3806326 | None:intergenic | 25.0% |
| ! | AAGATTAGAACATCAAGAAA+AGG | + | chr6.2:3805354-3805373 | MS.gene57107:CDS | 25.0% |
| ! | AATCACGCTATTAAAGAAAT+GGG | - | chr6.2:3806306-3806325 | None:intergenic | 25.0% |
| ! | ATTGTTCACAGAATATTACA+CGG | + | chr6.2:3808213-3808232 | MS.gene57107:intron | 25.0% |
| ! | ATTTATGGATTCTTGGATAA+GGG | - | chr6.2:3806759-3806778 | None:intergenic | 25.0% |
| ! | CAAAAAAAGAAAGGTTTCTT+TGG | + | chr6.2:3808296-3808315 | MS.gene57107:intron | 25.0% |
| ! | CAAATACCGATATATGTTAT+TGG | + | chr6.2:3808410-3808429 | MS.gene57107:intron | 25.0% |
| ! | GATTTAGTTATTCAAGCATT+TGG | - | chr6.2:3808755-3808774 | None:intergenic | 25.0% |
| ! | GCAAAACCAATAACATATAT+CGG | - | chr6.2:3808419-3808438 | None:intergenic | 25.0% |
| ! | GCAATTCAATTCAATTCAAT+TGG | + | chr6.2:3807879-3807898 | MS.gene57107:intron | 25.0% |
| ! | GTAGAAACCATATAATTACT+TGG | - | chr6.2:3808252-3808271 | None:intergenic | 25.0% |
| ! | TAGTTCATATTCATCCTAAT+TGG | + | chr6.2:3808326-3808345 | MS.gene57107:intron | 25.0% |
| ! | TATCCAAGAATCCATAAATA+AGG | + | chr6.2:3806760-3806779 | MS.gene57107:intron | 25.0% |
| ! | TATTTATGGATTCTTGGATA+AGG | - | chr6.2:3806760-3806779 | None:intergenic | 25.0% |
| ! | TGCTATTAGAAATAGTTAAC+TGG | - | chr6.2:3806683-3806702 | None:intergenic | 25.0% |
| ! | TGTAATATTCTGTGAACAAT+TGG | - | chr6.2:3808213-3808232 | None:intergenic | 25.0% |
| ! | TTTAAAGAAATTATGTGCTG+AGG | + | chr6.2:3808476-3808495 | MS.gene57107:CDS | 25.0% |
| !! | AAGCTTTTATGAAGTAAAGA+TGG | + | chr6.2:3807191-3807210 | MS.gene57107:intron | 25.0% |
| !! | GATAACTCTAATGATAATGA+AGG | + | chr6.2:3805138-3805157 | MS.gene57107:CDS | 25.0% |
| !! | TATTCTGCTCATTACAATTT+TGG | + | chr6.2:3805918-3805937 | MS.gene57107:intron | 25.0% |
| !! | TGATTTCCTTTCAAAGTTTT+TGG | + | chr6.2:3806969-3806988 | MS.gene57107:intron | 25.0% |
| !! | TGATTTTATGATACTACAGT+TGG | + | chr6.2:3807506-3807525 | MS.gene57107:intron | 25.0% |
| !! | TTCTGATTTGAATTTCAGAA+GGG | - | chr6.2:3807426-3807445 | None:intergenic | 25.0% |
| !! | TTTTAATAGAGGTTGTTCAT+TGG | + | chr6.2:3806256-3806275 | MS.gene57107:intron | 25.0% |
| !!! | AAACCTTTCTTTTTTTGGAA+AGG | - | chr6.2:3808293-3808312 | None:intergenic | 25.0% |
| !!! | AACCTTTCTTTTTTTGGAAA+GGG | - | chr6.2:3808292-3808311 | None:intergenic | 25.0% |
| !!! | AATGACTTTTTTTTGTAGAC+AGG | - | chr6.2:3808728-3808747 | None:intergenic | 25.0% |
| !!! | ACAATTTTTTTCCTTAGATG+GGG | - | chr6.2:3805460-3805479 | None:intergenic | 25.0% |
| !!! | CAAAGAAACCTTTCTTTTTT+TGG | - | chr6.2:3808298-3808317 | None:intergenic | 25.0% |
| !!! | GACAATTTTTTTCCTTAGAT+GGG | - | chr6.2:3805461-3805480 | None:intergenic | 25.0% |
| !!! | TCCAAAAACTTTTTTGTTTC+TGG | - | chr6.2:3806728-3806747 | None:intergenic | 25.0% |
| !!! | TGACTCATATTTTTAATGGA+AGG | + | chr6.2:3806500-3806519 | MS.gene57107:intron | 25.0% |
| !!! | TGTGTGACTCATATTTTTAA+TGG | + | chr6.2:3806496-3806515 | MS.gene57107:intron | 25.0% |
| AAAGCAATATCCAAATGCAT+TGG | - | chr6.2:3808626-3808645 | None:intergenic | 30.0% | |
| ACATCAAGAAAAGGAGATAA+TGG | + | chr6.2:3805363-3805382 | MS.gene57107:CDS | 30.0% | |
| AGCTTAAACAATGTAACTCT+AGG | - | chr6.2:3806384-3806403 | None:intergenic | 30.0% | |
| ATGTTTAAGGAACGTAACTA+TGG | + | chr6.2:3808978-3808997 | MS.gene57107:intron | 30.0% | |
| CTTTCAAATTGGAGAGTTTA+CGG | + | chr6.2:3807156-3807175 | MS.gene57107:intron | 30.0% | |
| GAAGCAAAGAAACTATAACA+AGG | + | chr6.2:3806885-3806904 | MS.gene57107:intron | 30.0% | |
| GCTTAAACAATGTAACTCTA+GGG | - | chr6.2:3806383-3806402 | None:intergenic | 30.0% | |
| GGAGTTGAAAACAATTACAT+TGG | + | chr6.2:3808648-3808667 | MS.gene57107:intron | 30.0% | |
| GTGAATTCACCTTTAATCTA+AGG | + | chr6.2:3806431-3806450 | MS.gene57107:intron | 30.0% | |
| TAGCAATCATAGACATCATT+TGG | + | chr6.2:3806698-3806717 | MS.gene57107:intron | 30.0% | |
| TATAACAAGGAAAGACAATG+AGG | + | chr6.2:3806898-3806917 | MS.gene57107:intron | 30.0% | |
| TCAAAGAATTTGGTAGATTG+TGG | + | chr6.2:3805054-3805073 | MS.gene57107:CDS | 30.0% | |
| TCACTATTCACTAACAAAAC+CGG | - | chr6.2:3806415-3806434 | None:intergenic | 30.0% | |
| TGATCTTGAACAATAAAGCT+AGG | - | chr6.2:3808833-3808852 | None:intergenic | 30.0% | |
| TGTAAATTACTCAAATGCTC+AGG | + | chr6.2:3806796-3806815 | MS.gene57107:intron | 30.0% | |
| TGTGGGAAATTATGTTTACA+AGG | + | chr6.2:3805725-3805744 | MS.gene57107:CDS | 30.0% | |
| TTCCAACTTAATGCAAATCT+TGG | - | chr6.2:3805487-3805506 | None:intergenic | 30.0% | |
| TTGTTTAAGCTTATCCAAAC+CGG | + | chr6.2:3806393-3806412 | MS.gene57107:intron | 30.0% | |
| TTTAAGTATGTTACTGCCAA+AGG | + | chr6.2:3808050-3808069 | MS.gene57107:CDS | 30.0% | |
| TTTCAATCATCCAATGCATT+TGG | + | chr6.2:3808613-3808632 | MS.gene57107:intron | 30.0% | |
| ! | AGGTGCACTCTTTAAAAATA+TGG | - | chr6.2:3806565-3806584 | None:intergenic | 30.0% |
| ! | CTTCTGATTTGAATTTCAGA+AGG | - | chr6.2:3807427-3807446 | None:intergenic | 30.0% |
| ! | GATAACTCGAATGATAATGA+AGG | + | chr6.2:3805105-3805124 | MS.gene57107:CDS | 30.0% |
| ! | GCCAGAAACAAAAAAGTTTT+TGG | + | chr6.2:3806724-3806743 | MS.gene57107:intron | 30.0% |
| ! | TCTGATTTGAATTTCAGAAG+GGG | - | chr6.2:3807425-3807444 | None:intergenic | 30.0% |
| ! | TTTTATGATACTACAGTTGG+TGG | + | chr6.2:3807509-3807528 | MS.gene57107:intron | 30.0% |
| !! | ATATTTTTAAAGAGTGCACC+TGG | + | chr6.2:3806564-3806583 | MS.gene57107:intron | 30.0% |
| !! | TATTTTTAAAGAGTGCACCT+GGG | + | chr6.2:3806565-3806584 | MS.gene57107:intron | 30.0% |
| !!! | ACCTTTCTTTTTTTGGAAAG+GGG | - | chr6.2:3808291-3808310 | None:intergenic | 30.0% |
| !!! | ATGCTTTGAAAAAGGGTTTT+AGG | + | chr6.2:3805328-3805347 | MS.gene57107:CDS | 30.0% |
| !!! | CAATTTTTTTCCTTAGATGG+GGG | - | chr6.2:3805459-3805478 | None:intergenic | 30.0% |
| !!! | GGACAATTTTTTTCCTTAGA+TGG | - | chr6.2:3805462-3805481 | None:intergenic | 30.0% |
| !!! | TTCTGCTTTTTAAGACATCT+AGG | - | chr6.2:3806534-3806553 | None:intergenic | 30.0% |
| AAAATACCCTGGAAATGTGT+TGG | - | chr6.2:3808539-3808558 | None:intergenic | 35.0% | |
| AAATATGAGTCACACATCTG+AGG | - | chr6.2:3806492-3806511 | None:intergenic | 35.0% | |
| AACTTAATGCAAATCTTGGC+TGG | - | chr6.2:3805483-3805502 | None:intergenic | 35.0% | |
| AATGTCTATTGGGACATTTG+TGG | - | chr6.2:3807486-3807505 | None:intergenic | 35.0% | |
| ACGCTATTAAAGAAATGGGT+GGG | - | chr6.2:3806302-3806321 | None:intergenic | 35.0% | |
| AGAATCCATAAATAAGGCTC+TGG | + | chr6.2:3806766-3806785 | MS.gene57107:intron | 35.0% | |
| AGACAACAACACAAGAATGA+CGG | + | chr6.2:3805961-3805980 | MS.gene57107:intron | 35.0% | |
| AGCCAAGATTTGCATTAAGT+TGG | + | chr6.2:3805482-3805501 | MS.gene57107:CDS | 35.0% | |
| AGTTAAACCAACGAAACAAC+AGG | + | chr6.2:3806135-3806154 | MS.gene57107:CDS | 35.0% | |
| ATGTCTATTGGGACATTTGT+GGG | - | chr6.2:3807485-3807504 | None:intergenic | 35.0% | |
| ATTCACTAACAAAACCGGTT+TGG | - | chr6.2:3806410-3806429 | None:intergenic | 35.0% | |
| CAACCTCTTGTTAAAGATGT+AGG | + | chr6.2:3805669-3805688 | MS.gene57107:CDS | 35.0% | |
| CGTAAACTCTCCAATTTGAA+AGG | - | chr6.2:3807158-3807177 | None:intergenic | 35.0% | |
| CTACAAAGGAACATAAGAGT+TGG | - | chr6.2:3807934-3807953 | None:intergenic | 35.0% | |
| CTGGTTCAATAGAAACTTTG+AGG | - | chr6.2:3807607-3807626 | None:intergenic | 35.0% | |
| CTTTCTTGTATCCTTGAGTT+TGG | + | chr6.2:3807744-3807763 | MS.gene57107:CDS | 35.0% | |
| GAAATCTGCTCAAATGCTTT+GGG | - | chr6.2:3808597-3808616 | None:intergenic | 35.0% | |
| GAAGCGAATAAGTGAAAGAA+TGG | + | chr6.2:3806000-3806019 | MS.gene57107:CDS | 35.0% | |
| GCACTGAAGGTTGTAATAAA+AGG | - | chr6.2:3806933-3806952 | None:intergenic | 35.0% | |
| GGTGATCTAAACATTAATCG+TGG | + | chr6.2:3807792-3807811 | MS.gene57107:CDS | 35.0% | |
| GTGTCAATGCTACATACATT+GGG | + | chr6.2:3806453-3806472 | MS.gene57107:intron | 35.0% | |
| TACATACATTGGGACTTACA+TGG | + | chr6.2:3806463-3806482 | MS.gene57107:intron | 35.0% | |
| TAGAACATCACAAGCTGATT+TGG | + | chr6.2:3807072-3807091 | MS.gene57107:intron | 35.0% | |
| TCCCCTTTCCAAAAAAAGAA+AGG | + | chr6.2:3808287-3808306 | MS.gene57107:intron | 35.0% | |
| TCTGCTTCCATTTGATCAAT+CGG | - | chr6.2:3806660-3806679 | None:intergenic | 35.0% | |
| TGAAATCTGCTCAAATGCTT+TGG | - | chr6.2:3808598-3808617 | None:intergenic | 35.0% | |
| TGAAGTTGTGCCTTTCAAAT+TGG | + | chr6.2:3807145-3807164 | MS.gene57107:intron | 35.0% | |
| TGAGGAATTGAGCAATTACA+GGG | - | chr6.2:3807589-3807608 | None:intergenic | 35.0% | |
| TGCATTTGGATATTGCTTTG+TGG | + | chr6.2:3808627-3808646 | MS.gene57107:intron | 35.0% | |
| TGTGGTACTATTCATGATGA+AGG | + | chr6.2:3805072-3805091 | MS.gene57107:CDS | 35.0% | |
| TTGAAACATGCGAGTATGAA+AGG | + | chr6.2:3808026-3808045 | MS.gene57107:CDS | 35.0% | |
| TTGAGGAATTGAGCAATTAC+AGG | - | chr6.2:3807590-3807609 | None:intergenic | 35.0% | |
| ! | ATGTTCCTTTGTAGCTCTAT+GGG | + | chr6.2:3807940-3807959 | MS.gene57107:intron | 35.0% |
| ! | CTAGGAGTTTGAAGTTAAGT+TGG | - | chr6.2:3807389-3807408 | None:intergenic | 35.0% |
| ! | GAAGAACTTTTCATCACAGT+CGG | - | chr6.2:3807461-3807480 | None:intergenic | 35.0% |
| ! | GAAGTAAAGATGGTTTGTGA+TGG | + | chr6.2:3807201-3807220 | MS.gene57107:intron | 35.0% |
| ! | GATTTGAAATGGTGTGTTTG+TGG | - | chr6.2:3807333-3807352 | None:intergenic | 35.0% |
| ! | GCATTGACACCTTAGATTAA+AGG | - | chr6.2:3806443-3806462 | None:intergenic | 35.0% |
| ! | TATGTTCCTTTGTAGCTCTA+TGG | + | chr6.2:3807939-3807958 | MS.gene57107:intron | 35.0% |
| ! | TCTGCTCATTACAATTTTGG+TGG | + | chr6.2:3805921-3805940 | MS.gene57107:intron | 35.0% |
| !! | AGAAATTCTGGTTCAACTCT+TGG | + | chr6.2:3808792-3808811 | MS.gene57107:intron | 35.0% |
| !! | ATGATCCAGAGCCTTATTTA+TGG | - | chr6.2:3806774-3806793 | None:intergenic | 35.0% |
| !! | ATGTTCGTCTTTGATTTTCC+AGG | - | chr6.2:3808457-3808476 | None:intergenic | 35.0% |
| !! | CAAGCATAAACTTTGAAGCA+CGG | - | chr6.2:3807632-3807651 | None:intergenic | 35.0% |
| !! | GAGCCTTATTTATGGATTCT+TGG | - | chr6.2:3806766-3806785 | None:intergenic | 35.0% |
| !! | GAGTTTGAAGTTAAGTTGGT+AGG | - | chr6.2:3807385-3807404 | None:intergenic | 35.0% |
| !! | GGAGAGTATGCTTTGAAAAA+GGG | + | chr6.2:3805321-3805340 | MS.gene57107:CDS | 35.0% |
| !! | TGGAGAGTATGCTTTGAAAA+AGG | + | chr6.2:3805320-3805339 | MS.gene57107:CDS | 35.0% |
| !! | TGTTCGTCTTTGATTTTCCA+GGG | - | chr6.2:3808456-3808475 | None:intergenic | 35.0% |
| !! | TTAAGTTGGTAGGTTGGATT+GGG | - | chr6.2:3807375-3807394 | None:intergenic | 35.0% |
| !! | TTGAAGTTAAGTTGGTAGGT+TGG | - | chr6.2:3807381-3807400 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTGCAACAGATTC+TGG | + | chr6.2:3808428-3808447 | MS.gene57107:intron | 35.0% |
| !!! | CTTTGAAAAAGGGTTTTAGG+TGG | + | chr6.2:3805331-3805350 | MS.gene57107:CDS | 35.0% |
| !!! | TCTTTTTTTGGAAAGGGGAT+AGG | - | chr6.2:3808286-3808305 | None:intergenic | 35.0% |
| AACTTGCGATTGAGTACCAT+GGG | - | chr6.2:3806119-3806138 | None:intergenic | 40.0% | |
| AATCGAATCACAGATGCCTT+TGG | + | chr6.2:3806076-3806095 | MS.gene57107:CDS | 40.0% | |
| AATTCTTGCTTGCTCAAGAG+AGG | + | chr6.2:3805401-3805420 | MS.gene57107:CDS | 40.0% | |
| AGCTGCTAGAAAAGATAGAG+TGG | + | chr6.2:3806038-3806057 | MS.gene57107:CDS | 40.0% | |
| ATTCTTGCTTGCTCAAGAGA+GGG | + | chr6.2:3805402-3805421 | MS.gene57107:CDS | 40.0% | |
| CACGCTATTAAAGAAATGGG+TGG | - | chr6.2:3806303-3806322 | None:intergenic | 40.0% | |
| CCAAGGCCAAAAACTTTGAA+AGG | - | chr6.2:3806978-3806997 | None:intergenic | 40.0% | |
| CGACATGCAATTGGAAAAGA+AGG | + | chr6.2:3805750-3805769 | MS.gene57107:CDS | 40.0% | |
| CGTGCTTCAAAGTTTATGCT+TGG | + | chr6.2:3807630-3807649 | MS.gene57107:intron | 40.0% | |
| CTTCCATTTGATCAATCGGA+TGG | - | chr6.2:3806656-3806675 | None:intergenic | 40.0% | |
| GAAAAACACATCCCTGTTTC+AGG | - | chr6.2:3805273-3805292 | None:intergenic | 40.0% | |
| GAAATTATGTGCTGAGGCTT+TGG | + | chr6.2:3808482-3808501 | MS.gene57107:CDS | 40.0% | |
| GAAGATTGTTCAAGGCTAAC+AGG | + | chr6.2:3805574-3805593 | MS.gene57107:CDS | 40.0% | |
| GCAATTGGAAAAGAAGGTGA+TGG | + | chr6.2:3805756-3805775 | MS.gene57107:intron | 40.0% | |
| GCTCCTACATCTTTAACAAG+AGG | - | chr6.2:3805675-3805694 | None:intergenic | 40.0% | |
| GGTGTCAATGCTACATACAT+TGG | + | chr6.2:3806452-3806471 | MS.gene57107:intron | 40.0% | |
| GTGGACGATGTGAAAAACAA+GGG | + | chr6.2:3807528-3807547 | MS.gene57107:intron | 40.0% | |
| GTGTTTGTGGTATTGCGTTT+GGG | - | chr6.2:3807320-3807339 | None:intergenic | 40.0% | |
| GTTAAAAACTCCCCCATCTA+AGG | + | chr6.2:3805446-3805465 | MS.gene57107:CDS | 40.0% | |
| TACAAGGAACGACATGCAAT+TGG | + | chr6.2:3805741-3805760 | MS.gene57107:CDS | 40.0% | |
| TCAACTCTTGGATAGAAGCT+CGG | + | chr6.2:3808804-3808823 | MS.gene57107:intron | 40.0% | |
| TCTTGTATCCTTGAGTTTGG+CGG | + | chr6.2:3807747-3807766 | MS.gene57107:CDS | 40.0% | |
| TGAACAATCTTCCCTTTGCA+GGG | - | chr6.2:3805566-3805585 | None:intergenic | 40.0% | |
| TGCAAAGGGAAGATTGTTCA+AGG | + | chr6.2:3805566-3805585 | MS.gene57107:CDS | 40.0% | |
| TGTGTTTGTGGTATTGCGTT+TGG | - | chr6.2:3807321-3807340 | None:intergenic | 40.0% | |
| TTGAACAATCTTCCCTTTGC+AGG | - | chr6.2:3805567-3805586 | None:intergenic | 40.0% | |
| ! | AACTTTTCATCACAGTCGGT+AGG | - | chr6.2:3807457-3807476 | None:intergenic | 40.0% |
| ! | ACCATTTTGCAAACGAGATG+TGG | + | chr6.2:3805707-3805726 | MS.gene57107:CDS | 40.0% |
| ! | AGTATCGGGCTTTACTCTTA+GGG | + | chr6.2:3808003-3808022 | MS.gene57107:CDS | 40.0% |
| ! | AGTGCCTTTTCAATGGTTTG+GGG | - | chr6.2:3807235-3807254 | None:intergenic | 40.0% |
| ! | CCATTTTGCAAACGAGATGT+GGG | + | chr6.2:3805708-3805727 | MS.gene57107:CDS | 40.0% |
| ! | CTAATGATGATGAAGCACGT+TGG | + | chr6.2:3805244-3805263 | MS.gene57107:CDS | 40.0% |
| ! | GAAAAACAAGGGCTAGTAGA+TGG | + | chr6.2:3807539-3807558 | MS.gene57107:intron | 40.0% |
| ! | GAGTGCCTTTTCAATGGTTT+GGG | - | chr6.2:3807236-3807255 | None:intergenic | 40.0% |
| ! | TAACTTGCGATTGAGTACCA+TGG | - | chr6.2:3806120-3806139 | None:intergenic | 40.0% |
| !! | AGAGTGCCTTTTCAATGGTT+TGG | - | chr6.2:3807237-3807256 | None:intergenic | 40.0% |
| !! | CTCGGAACTTGTTATCAATC+AGG | + | chr6.2:3808076-3808095 | MS.gene57107:CDS | 40.0% |
| !! | GAAGCAAAAACAAGCACTGA+AGG | - | chr6.2:3806946-3806965 | None:intergenic | 40.0% |
| !! | GGTTGTTCATTGGTTCCAAA+TGG | + | chr6.2:3806266-3806285 | MS.gene57107:intron | 40.0% |
| !! | GTTAAGTTGGTAGGTTGGAT+TGG | - | chr6.2:3807376-3807395 | None:intergenic | 40.0% |
| !! | TCTATGCAGTAAAGCGTTGA+TGG | - | chr6.2:3807056-3807075 | None:intergenic | 40.0% |
| !! | TGCATTAAGTTGGAAGACGA+TGG | + | chr6.2:3805492-3805511 | MS.gene57107:CDS | 40.0% |
| !! | TTTCTCACCTGTTGTTTCGT+TGG | - | chr6.2:3806145-3806164 | None:intergenic | 40.0% |
| !!! | CCTTTCAAAGTTTTTGGCCT+TGG | + | chr6.2:3806975-3806994 | MS.gene57107:intron | 40.0% |
| AAAAGAGTCCGCTGAGTATC+GGG | + | chr6.2:3807989-3808008 | MS.gene57107:CDS | 45.0% | |
| AACAAGTTCCGAGTCTCCTT+TGG | - | chr6.2:3808069-3808088 | None:intergenic | 45.0% | |
| AACATTAATCGTGGACCAGC+AGG | + | chr6.2:3807801-3807820 | MS.gene57107:CDS | 45.0% | |
| AGCTGTTCGTAATGCAAACC+GGG | + | chr6.2:3809001-3809020 | MS.gene57107:CDS | 45.0% | |
| AGTTGGAAGACGATGGTTTG+TGG | + | chr6.2:3805499-3805518 | MS.gene57107:CDS | 45.0% | |
| ATACCCTTGAAGCGTACCAA+AGG | - | chr6.2:3806095-3806114 | None:intergenic | 45.0% | |
| ATCCCCCCAAACCATTGAAA+AGG | + | chr6.2:3807228-3807247 | MS.gene57107:intron | 45.0% | |
| ATGCCTTTGGTACGCTTCAA+GGG | + | chr6.2:3806089-3806108 | MS.gene57107:CDS | 45.0% | |
| CAAAAGAGTCCGCTGAGTAT+CGG | + | chr6.2:3807988-3808007 | MS.gene57107:CDS | 45.0% | |
| CCCACATCTCGTTTGCAAAA+TGG | - | chr6.2:3805711-3805730 | None:intergenic | 45.0% | |
| CCTCTACTCATCATCATCCA+AGG | - | chr6.2:3806995-3807014 | None:intergenic | 45.0% | |
| CGAAACCCATAGAGCTACAA+AGG | - | chr6.2:3807948-3807967 | None:intergenic | 45.0% | |
| GAGCTGTTCGTAATGCAAAC+CGG | + | chr6.2:3809000-3809019 | MS.gene57107:CDS | 45.0% | |
| GGCACTCTAGCCAAATTATG+AGG | + | chr6.2:3807249-3807268 | MS.gene57107:intron | 45.0% | |
| GGTGGACGATGTGAAAAACA+AGG | + | chr6.2:3807527-3807546 | MS.gene57107:intron | 45.0% | |
| GTGGCTGAGAATGTTTGGTT+TGG | - | chr6.2:3807293-3807312 | None:intergenic | 45.0% | |
| TGGACCTTCTGTGTATGAGA+GGG | + | chr6.2:3806357-3806376 | MS.gene57107:intron | 45.0% | |
| TGGCCATCCGATTGATCAAA+TGG | + | chr6.2:3806650-3806669 | MS.gene57107:intron | 45.0% | |
| TGTTACTGCCAAAGGAGACT+CGG | + | chr6.2:3808058-3808077 | MS.gene57107:CDS | 45.0% | |
| TTGGACCTTCTGTGTATGAG+AGG | + | chr6.2:3806356-3806375 | MS.gene57107:intron | 45.0% | |
| TTGTGGTATTGCGTTTGGGT+TGG | - | chr6.2:3807316-3807335 | None:intergenic | 45.0% | |
| TTTCATCACAGTCGGTAGGT+TGG | - | chr6.2:3807453-3807472 | None:intergenic | 45.0% | |
| ! | AAACAAGGGCTAGTAGATGG+TGG | + | chr6.2:3807542-3807561 | MS.gene57107:intron | 45.0% |
| ! | AACCATTGAGATTGATGGCC+CGG | - | chr6.2:3809022-3809041 | None:intergenic | 45.0% |
| ! | CCTTGGATGATGATGAGTAG+AGG | + | chr6.2:3806992-3807011 | MS.gene57107:intron | 45.0% |
| ! | GCTTGCTGAAGATGGATATC+TGG | + | chr6.2:3807839-3807858 | MS.gene57107:CDS | 45.0% |
| ! | GCTTTACTGCTTGCTGAAGA+TGG | + | chr6.2:3807831-3807850 | MS.gene57107:CDS | 45.0% |
| ! | GTGGGACATTTTGCACCATT+TGG | - | chr6.2:3806284-3806303 | None:intergenic | 45.0% |
| ! | TGTGGTATTGCGTTTGGGTT+GGG | - | chr6.2:3807315-3807334 | None:intergenic | 45.0% |
| ! | TTGGTGGTTTCATCTCACCA+CGG | + | chr6.2:3805937-3805956 | MS.gene57107:intron | 45.0% |
| !! | ACATCACAAGCTGATTTGGC+TGG | + | chr6.2:3807076-3807095 | MS.gene57107:intron | 45.0% |
| !! | ACTCAGCGGACTCTTTTGTT+TGG | - | chr6.2:3807986-3808005 | None:intergenic | 45.0% |
| !! | ATCCAAAGCACTGATGATCC+AGG | + | chr6.2:3805624-3805643 | MS.gene57107:CDS | 45.0% |
| !! | CATCACAAGCTGATTTGGCT+GGG | + | chr6.2:3807077-3807096 | MS.gene57107:intron | 45.0% |
| !! | GAGTATCGGGCTTTACTCTT+AGG | + | chr6.2:3808002-3808021 | MS.gene57107:CDS | 45.0% |
| !! | GTGCCTTTTCAATGGTTTGG+GGG | - | chr6.2:3807234-3807253 | None:intergenic | 45.0% |
| !! | TAAACTTTGAAGCACGGTGC+TGG | - | chr6.2:3807626-3807645 | None:intergenic | 45.0% |
| !! | TGCCTTTTCAATGGTTTGGG+GGG | - | chr6.2:3807233-3807252 | None:intergenic | 45.0% |
| !! | TGGCTAGAGTGCCTTTTCAA+TGG | - | chr6.2:3807242-3807261 | None:intergenic | 45.0% |
| !! | TTTTAAAGAGTGCACCTGGG+CGG | + | chr6.2:3806568-3806587 | MS.gene57107:intron | 45.0% |
| !!! | TCTTTTCTAGCAGCTCTGAG+TGG | - | chr6.2:3806033-3806052 | None:intergenic | 45.0% |
| !!! | AAAATTTTATAAATTTGTTT+TGG | + | chr6.2:3806630-3806649 | MS.gene57107:intron | 5.0% |
| AACCGGGCCATCAATCTCAA+TGG | + | chr6.2:3809017-3809036 | MS.gene57107:CDS | 50.0% | |
| AGTTTGGCGGTGTATCCATG+GGG | + | chr6.2:3807760-3807779 | MS.gene57107:CDS | 50.0% | |
| ATCACCATACTCAACCCCCA+TGG | - | chr6.2:3807778-3807797 | None:intergenic | 50.0% | |
| CACGTTGGAAGCCTGAAACA+GGG | + | chr6.2:3805259-3805278 | MS.gene57107:CDS | 50.0% | |
| CCCTGGAAATGTGTTGGATG+CGG | - | chr6.2:3808533-3808552 | None:intergenic | 50.0% | |
| CCGCATCCAACACATTTCCA+GGG | + | chr6.2:3808530-3808549 | MS.gene57107:CDS | 50.0% | |
| CTCCTGGATCATCAGTGCTT+TGG | - | chr6.2:3805629-3805648 | None:intergenic | 50.0% | |
| GAGTAAAGCCCGATACTCAG+CGG | - | chr6.2:3808000-3808019 | None:intergenic | 50.0% | |
| GAGTTTGGCGGTGTATCCAT+GGG | + | chr6.2:3807759-3807778 | MS.gene57107:CDS | 50.0% | |
| GATGCCTTTGGTACGCTTCA+AGG | + | chr6.2:3806088-3806107 | MS.gene57107:CDS | 50.0% | |
| GTATCCATGGGGGTTGAGTA+TGG | + | chr6.2:3807771-3807790 | MS.gene57107:CDS | 50.0% | |
| GTCTTCTTGATCCTCACTCC+TGG | - | chr6.2:3805645-3805664 | None:intergenic | 50.0% | |
| GTTGGGTGGCTGAGAATGTT+TGG | - | chr6.2:3807298-3807317 | None:intergenic | 50.0% | |
| TATGGGTTTCGCCAAGGACT+GGG | + | chr6.2:3807957-3807976 | MS.gene57107:CDS | 50.0% | |
| TCCGCATCCAACACATTTCC+AGG | + | chr6.2:3808529-3808548 | MS.gene57107:CDS | 50.0% | |
| TGAGTTTGGCGGTGTATCCA+TGG | + | chr6.2:3807758-3807777 | MS.gene57107:CDS | 50.0% | |
| TGCAACAGATTCTGGATCCC+TGG | + | chr6.2:3808436-3808455 | MS.gene57107:intron | 50.0% | |
| TGGATACACCGCCAAACTCA+AGG | - | chr6.2:3807758-3807777 | None:intergenic | 50.0% | |
| ! | GTTGGTAGGTTGGATTGGGT+TGG | - | chr6.2:3807371-3807390 | None:intergenic | 50.0% |
| ! | TAGCTCTATGGGTTTCGCCA+AGG | + | chr6.2:3807951-3807970 | MS.gene57107:intron | 50.0% |
| ! | TCTTGTGTTGTTGTCTGCCG+TGG | - | chr6.2:3805957-3805976 | None:intergenic | 50.0% |
| ! | TTGTTTGGTGACCCAGTCCT+TGG | - | chr6.2:3807971-3807990 | None:intergenic | 50.0% |
| !! | ACGCTTCAAGGGTATTCCCA+TGG | + | chr6.2:3806100-3806119 | MS.gene57107:CDS | 50.0% |
| !! | AGGGGAAACTTGCTACTGCT+AGG | - | chr6.2:3807407-3807426 | None:intergenic | 50.0% |
| AGGGCCCTCTCATACACAGA+AGG | - | chr6.2:3806364-3806383 | None:intergenic | 55.0% | |
| AGTAAAGCTCCTGCACCTGC+TGG | - | chr6.2:3807819-3807838 | None:intergenic | 55.0% | |
| CAAACCAATTTGCACCGCCC+AGG | - | chr6.2:3806585-3806604 | None:intergenic | 55.0% | |
| CTATGGGTTTCGCCAAGGAC+TGG | + | chr6.2:3807956-3807975 | MS.gene57107:CDS | 55.0% | |
| CTGGGCGGTGCAAATTGGTT+TGG | + | chr6.2:3806583-3806602 | MS.gene57107:intron | 55.0% | |
| GCACGTTGGAAGCCTGAAAC+AGG | + | chr6.2:3805258-3805277 | MS.gene57107:CDS | 55.0% | |
| GTTTGGCGGTGTATCCATGG+GGG | + | chr6.2:3807761-3807780 | MS.gene57107:CDS | 55.0% | |
| ! | CACGAGACTAGCCCTGCAAA+GGG | + | chr6.2:3805552-3805571 | MS.gene57107:CDS | 55.0% |
| ! | GCACTGATGATCCAGGAGTG+AGG | + | chr6.2:3805631-3805650 | MS.gene57107:CDS | 55.0% |
| ! | TCACGAGACTAGCCCTGCAA+AGG | + | chr6.2:3805551-3805570 | MS.gene57107:CDS | 55.0% |
| !! | CAGGGCTAGTCTCGTGAGAA+TGG | - | chr6.2:3805548-3805567 | None:intergenic | 55.0% |
| !! | GGTATTGCGTTTGGGTTGGG+TGG | - | chr6.2:3807312-3807331 | None:intergenic | 55.0% |
| AATCGTGGACCAGCAGGTGC+AGG | + | chr6.2:3807807-3807826 | MS.gene57107:CDS | 60.0% | |
| TGCACCTGGGCGGTGCAAAT+TGG | + | chr6.2:3806578-3806597 | MS.gene57107:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 3805045 | 3809043 | 3805045 | ID=MS.gene57107 |
| chr6.2 | mRNA | 3805045 | 3809043 | 3805045 | ID=MS.gene57107.t1;Parent=MS.gene57107 |
| chr6.2 | exon | 3805045 | 3805771 | 3805045 | ID=MS.gene57107.t1.exon1;Parent=MS.gene57107.t1 |
| chr6.2 | CDS | 3805045 | 3805771 | 3805045 | ID=cds.MS.gene57107.t1;Parent=MS.gene57107.t1 |
| chr6.2 | exon | 3805963 | 3806156 | 3805963 | ID=MS.gene57107.t1.exon2;Parent=MS.gene57107.t1 |
| chr6.2 | CDS | 3805963 | 3806156 | 3805963 | ID=cds.MS.gene57107.t1;Parent=MS.gene57107.t1 |
| chr6.2 | exon | 3807744 | 3807860 | 3807744 | ID=MS.gene57107.t1.exon3;Parent=MS.gene57107.t1 |
| chr6.2 | CDS | 3807744 | 3807860 | 3807744 | ID=cds.MS.gene57107.t1;Parent=MS.gene57107.t1 |
| chr6.2 | exon | 3807954 | 3808097 | 3807954 | ID=MS.gene57107.t1.exon4;Parent=MS.gene57107.t1 |
| chr6.2 | CDS | 3807954 | 3808097 | 3807954 | ID=cds.MS.gene57107.t1;Parent=MS.gene57107.t1 |
| chr6.2 | exon | 3808444 | 3808551 | 3808444 | ID=MS.gene57107.t1.exon5;Parent=MS.gene57107.t1 |
| chr6.2 | CDS | 3808444 | 3808551 | 3808444 | ID=cds.MS.gene57107.t1;Parent=MS.gene57107.t1 |
| chr6.2 | exon | 3808987 | 3809043 | 3808987 | ID=MS.gene57107.t1.exon6;Parent=MS.gene57107.t1 |
| chr6.2 | CDS | 3808987 | 3809043 | 3808987 | ID=cds.MS.gene57107.t1;Parent=MS.gene57107.t1 |
| Gene Sequence |
| Protein sequence |
