AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63793

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63793.t1 MTR_5g093560 96.612 915 22 2 1 915 1 906 0.0 1773
MS.gene63793.t1 MTR_5g093560 96.485 825 20 2 91 915 14 829 0.0 1586
MS.gene63793.t1 MTR_5g093560 96.606 825 19 2 91 915 23 838 0.0 1585
MS.gene63793.t1 MTR_5g093560 96.711 760 16 2 156 915 1 751 0.0 1455
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63793.t1 AT5G55100 43.113 951 393 24 1 915 1 839 0.0 579
MS.gene63793.t1 AT5G55100 43.113 951 393 24 1 915 1 839 0.0 578
MS.gene63793.t1 AT5G55100 38.070 767 328 23 183 915 1 654 3.64e-108 348
MS.gene63793.t1 AT5G55100 38.070 767 328 23 183 915 1 654 3.64e-108 348
MS.gene63793.t1 AT5G55100 38.070 767 328 23 183 915 1 654 3.64e-108 348
MS.gene63793.t1 AT5G55100 38.070 767 328 23 183 915 1 654 3.64e-108 348
MS.gene63793.t1 AT5G55100 38.070 767 328 23 183 915 1 654 3.64e-108 348
MS.gene63793.t1 AT5G55100 38.070 767 328 23 183 915 1 654 4.60e-108 348
MS.gene63793.t1 AT5G55100 38.070 767 328 23 183 915 1 654 4.60e-108 348
MS.gene63793.t1 AT5G55100 38.070 767 328 23 183 915 1 654 4.60e-108 348
MS.gene63793.t1 AT5G55100 38.070 767 328 23 183 915 1 654 4.60e-108 348
MS.gene63793.t1 AT5G55100 38.070 767 328 23 183 915 1 654 4.60e-108 348

Find 205 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAACATGGCTCTAATTT+TGG 0.118147 5.3:-75245408 None:intergenic
TTCCTCCTCTTCATGTTTAC+TGG 0.123621 5.3:-75244721 None:intergenic
CCACCGAGCTCTGGACTTTC+AGG 0.131202 5.3:+75244498 MS.gene63793:CDS
AGATGACTATTGGCAATTTA+AGG 0.201652 5.3:+75244016 MS.gene63793:CDS
TCATCTTGAATTTCTCTTTC+CGG 0.219255 5.3:-75243999 None:intergenic
ACAGGAGTTGCCCCAGATTC+AGG 0.224788 5.3:+75243125 MS.gene63793:CDS
AGTTTGAGATTGGCTGTCTT+TGG 0.250807 5.3:-75244061 None:intergenic
TCTTTGCTTGGATCTGTCTA+TGG 0.271680 5.3:+75242855 MS.gene63793:CDS
GATCCGCTGGAGTGTGCTTC+TGG 0.286817 5.3:-75243942 None:intergenic
GCACCATTAGACCCTGAATC+TGG 0.291563 5.3:-75243137 None:intergenic
TGAGTCTGTTCTTGCTGAAC+AGG 0.291601 5.3:+75243286 MS.gene63793:CDS
CAAGGAGATAATCCAACATT+TGG 0.295832 5.3:+75242687 MS.gene63793:CDS
AGAAATGCTTCCATCCTTCT+TGG 0.299556 5.3:-75243009 None:intergenic
GTTTGTTTAGATAATGATTC+AGG 0.315306 5.3:+75241940 MS.gene63793:intron
GACTGATTCCGCTTTATAAC+AGG 0.329088 5.3:-75243062 None:intergenic
GCGAGGTTGGGCGGGCTAGC+AGG 0.329386 5.3:+75245303 MS.gene63793:CDS
CTATTCTTCAGGCAGCTACT+AGG 0.346882 5.3:+75244115 MS.gene63793:CDS
AGAGGCAGAGTTGGAGGAGG+GGG 0.351243 5.3:+75245250 MS.gene63793:CDS
TGAAGTAAGCTTTCTGGTAC+TGG 0.351760 5.3:-75242072 None:intergenic
CGATTAGAAGGCAGAAGAAA+TGG 0.352536 5.3:-75243329 None:intergenic
ATCTGATGTAGCTTCTCGTT+TGG 0.354189 5.3:-75242597 None:intergenic
TCAGAAACATTAGTTACTTC+AGG 0.356338 5.3:-75245374 None:intergenic
AGATTATGAAGTAAGCTTTC+TGG 0.357635 5.3:-75242078 None:intergenic
CACCGGAAGCTCTCGTTGAT+TGG 0.358199 5.3:+75239431 MS.gene63793:CDS
CGTTTGAGGCGAGGAGGAAT+TGG 0.360029 5.3:-75239502 None:intergenic
CCCTCAGAATAATTTCTGAT+TGG 0.369800 5.3:-75242659 None:intergenic
TCTGCAATAGCCTTGGCAAC+TGG 0.375868 5.3:-75244306 None:intergenic
GCTGCTACTTCTGCATCATC+AGG 0.381682 5.3:+75242954 MS.gene63793:CDS
GAGAAATTCAAGATGACTAT+TGG 0.382253 5.3:+75244006 MS.gene63793:CDS
TAGTTCAATCTTAGATGTAC+TGG 0.382480 5.3:-75243183 None:intergenic
TTCCAATCAACGAGAGCTTC+CGG 0.387725 5.3:-75239433 None:intergenic
CAGCTACTAGGGGTATTAAA+AGG 0.387895 5.3:+75244127 MS.gene63793:CDS
AGCAGCCGCAGCTATTCTTC+AGG 0.392106 5.3:+75244104 MS.gene63793:CDS
AGAAAGCTTACTTCATAATC+TGG 0.393618 5.3:+75242080 MS.gene63793:CDS
ATGCAGACAGGGACAGAAAC+AGG 0.401823 5.3:+75244859 MS.gene63793:CDS
GTTTGAGATTGGCTGTCTTT+GGG 0.407276 5.3:-75244060 None:intergenic
TCTTTCCGGTCCATGTCATT+TGG 0.407743 5.3:-75243985 None:intergenic
TCTGTTGAGCCACCGAGCTC+TGG 0.414659 5.3:+75244489 MS.gene63793:CDS
AGTGGTAATGGTCCAGGCCT+TGG 0.420560 5.3:+75244180 MS.gene63793:CDS
CAAAATTAGAGCCATGTTGA+TGG 0.424496 5.3:+75245409 MS.gene63793:CDS
GCCCCAGATTCAGGGTCTAA+TGG 0.425369 5.3:+75243134 MS.gene63793:CDS
CCAACGACAAGTATTCTCAT+AGG 0.427441 5.3:+75244910 MS.gene63793:CDS
TGTGGTTGTTCTTCATGAAT+CGG 0.429815 5.3:-75239604 None:intergenic
TCTGAGTTATCAGTATTGAA+TGG 0.431503 5.3:-75244576 None:intergenic
CTTTCTGGTACTGGAAAGTT+GGG 0.433946 5.3:-75242063 None:intergenic
GGAGGTGCATTGTCTTTGCT+TGG 0.435508 5.3:+75242843 MS.gene63793:CDS
GATTGGCTGTCTTTGGGAGT+TGG 0.441345 5.3:-75244054 None:intergenic
AACCGATGCAGGCTCAACTT+TGG 0.442622 5.3:+75242788 MS.gene63793:CDS
TAAGTATGATATCGATTAGA+AGG 0.444515 5.3:-75243341 None:intergenic
AGAGAGGCAGAGTTGGAGGA+GGG 0.446411 5.3:+75245248 MS.gene63793:CDS
GCTTTCTGGTACTGGAAAGT+TGG 0.447870 5.3:-75242064 None:intergenic
AAGGAGATAATCCAACATTT+GGG 0.448085 5.3:+75242688 MS.gene63793:CDS
TGCTGAAAGAGAGGCAGAGT+TGG 0.452101 5.3:+75245241 MS.gene63793:CDS
TACGGATGAAGATGATGATC+AGG 0.452690 5.3:-75242720 None:intergenic
TGCTAACTGTAGTTTGAGAT+TGG 0.455284 5.3:-75244071 None:intergenic
CACCATTAGACCCTGAATCT+GGG 0.456401 5.3:-75243136 None:intergenic
CGAGGTTGGGCGGGCTAGCA+GGG 0.456916 5.3:+75245304 MS.gene63793:CDS
CTGAATTATTCAAGTCTACA+AGG 0.458387 5.3:+75245336 MS.gene63793:CDS
GAAATCTTGCTGGTAAAGAA+AGG 0.460928 5.3:+75244538 MS.gene63793:CDS
AGTAAGGCGTCAAGTGGTAA+TGG 0.467155 5.3:+75244168 MS.gene63793:CDS
GAGAGGCAGAGTTGGAGGAG+GGG 0.468764 5.3:+75245249 MS.gene63793:CDS
TGATGTAGCTTCTCGTTTGG+AGG 0.470498 5.3:-75242594 None:intergenic
TCAGATGGAGGTTCAACAAC+AGG 0.471995 5.3:-75243206 None:intergenic
ATAATGAAAGGCGATCAAAA+AGG 0.473517 5.3:+75244682 MS.gene63793:CDS
TATTCTTCAGGCAGCTACTA+GGG 0.474651 5.3:+75244116 MS.gene63793:CDS
GAAGATGATGATCAGGCATC+AGG 0.477942 5.3:-75242713 None:intergenic
CAGGAGTTGCCCCAGATTCA+GGG 0.478057 5.3:+75243126 MS.gene63793:CDS
GCTGAGATTAGAAATCTTGC+TGG 0.478163 5.3:+75244528 MS.gene63793:CDS
TCAGGTGCAGTGAATTCATC+AGG 0.486609 5.3:+75241958 MS.gene63793:CDS
TAGCGTGTCCACTGAGACAA+AGG 0.486789 5.3:+75242014 MS.gene63793:CDS
GATGATGAGTGCGGCGTTTG+AGG 0.486900 5.3:-75239516 None:intergenic
TATGCTTTGTCTTTCTGCTC+CGG 0.487165 5.3:-75245205 None:intergenic
GTCGGGACAGGGATGCAGAC+AGG 0.487327 5.3:+75244847 MS.gene63793:CDS
AGTCAGGAGCTGGATCAAAC+AGG 0.488581 5.3:+75242822 MS.gene63793:CDS
CCACATGTGCGTTTCTCTCA+AGG 0.490342 5.3:-75242920 None:intergenic
TTTGCCGTCATCTCAACTGC+AGG 0.490397 5.3:+75244236 MS.gene63793:CDS
ATAACTATCTTTAAGTCAGA+TGG 0.491088 5.3:-75243221 None:intergenic
GATTAGAAGGCAGAAGAAAT+GGG 0.493049 5.3:-75243328 None:intergenic
CATGTTTACTGGATCTTGAA+CGG 0.493859 5.3:-75244710 None:intergenic
CCACCATCACTTCCAAGGCC+TGG 0.498224 5.3:-75244192 None:intergenic
TGCTTCTGTTCCAGTTGCCA+AGG 0.499747 5.3:+75244296 MS.gene63793:CDS
TGAAAGAGAGGCAGAGTTGG+AGG 0.499968 5.3:+75245244 MS.gene63793:CDS
AGTCACAAGTAAGCGAGGTT+GGG 0.499970 5.3:+75245291 MS.gene63793:CDS
ACCTACCAAATGACATGGAC+CGG 0.500293 5.3:+75243980 MS.gene63793:CDS
AAAGATGACAAAACCGATGC+AGG 0.500690 5.3:+75242777 MS.gene63793:CDS
AAGAAAATAAAGAAGATACA+AGG 0.502836 5.3:+75244772 MS.gene63793:CDS
GGCTCAACAGATAAAGCTCT+TGG 0.504528 5.3:-75244477 None:intergenic
GCAATGTTTGTCAGCAAACA+TGG 0.506547 5.3:+75242633 MS.gene63793:CDS
AAGAGAGGCAGAGTTGGAGG+AGG 0.507274 5.3:+75245247 MS.gene63793:CDS
TGACGGCAAACTCCGAGAGC+TGG 0.507276 5.3:-75244223 None:intergenic
ACAAGTAAGCGAGGTTGGGC+GGG 0.509025 5.3:+75245295 MS.gene63793:CDS
CTTCACACAGAAGTCGGGAC+AGG 0.510210 5.3:+75244835 MS.gene63793:CDS
TCAACAAGAAACCTAAAATA+CGG 0.511809 5.3:-75242738 None:intergenic
AGAATACTTGTCGTTGGAGG+AGG 0.513912 5.3:-75244904 None:intergenic
AGTTCTTCAAACTGCTGAAG+AGG 0.519694 5.3:+75243373 MS.gene63793:CDS
TCGATCTTCACACAGAAGTC+GGG 0.520051 5.3:+75244830 MS.gene63793:CDS
ACAGTCTAAGTTACAAGGCA+AGG 0.520076 5.3:+75243915 MS.gene63793:intron
GGCTATTGCAGCAGCAGGTG+AGG 0.520962 5.3:+75244335 MS.gene63793:CDS
AAATCTTGCTGGTAAAGAAA+GGG 0.523325 5.3:+75244539 MS.gene63793:CDS
CGAGATAACGTTGATGATCA+AGG 0.524860 5.3:-75239564 None:intergenic
ATCTTCAGATGCAGCCAAGA+AGG 0.525024 5.3:+75242995 MS.gene63793:CDS
AGAGGAGGAAGAAGAGGACG+AGG 0.526595 5.3:+75244734 MS.gene63793:CDS
GTCCAAAGTTGAGCCTGCAT+CGG 0.526767 5.3:-75242790 None:intergenic
CCAGGCCTTGGAAGTGATGG+TGG 0.527048 5.3:+75244192 MS.gene63793:CDS
TTTGGACAAGAATAGAAGTC+AGG 0.527933 5.3:+75242806 MS.gene63793:CDS
GCTGAACAGGATCGTGCTCA+TGG 0.531525 5.3:+75243299 MS.gene63793:CDS
GCGTCAAGTGGTAATGGTCC+AGG 0.533576 5.3:+75244174 MS.gene63793:CDS
GTGGGAATTTGTCCAGCTCT+CGG 0.534175 5.3:+75244211 MS.gene63793:CDS
TGTTTACAGTCTAAGTTACA+AGG 0.534524 5.3:+75243910 MS.gene63793:intron
AAGTCACAAGTAAGCGAGGT+TGG 0.536520 5.3:+75245290 MS.gene63793:CDS
CAAGAATAGAAGTCAGGAGC+TGG 0.537742 5.3:+75242812 MS.gene63793:CDS
TACGCGAATGTCTATGCTCA+TGG 0.538001 5.3:-75245064 None:intergenic
GGCATCAGGAACCCAAATGT+TGG 0.539081 5.3:-75242699 None:intergenic
TCCGGTCCATGTCATTTGGT+AGG 0.541588 5.3:-75243981 None:intergenic
ATGAGAATACTTGTCGTTGG+AGG 0.542787 5.3:-75244907 None:intergenic
AACAGGATCGTGCTCATGGA+AGG 0.546005 5.3:+75243303 MS.gene63793:CDS
CACAAGTAAGCGAGGTTGGG+CGG 0.550850 5.3:+75245294 MS.gene63793:CDS
AAAGTGGCTATTGCAGCAGC+AGG 0.551862 5.3:+75244330 MS.gene63793:CDS
GAACTCATAGACGGATCCGC+TGG 0.552448 5.3:-75243955 None:intergenic
TCATGAATCGGAGAAGAAGA+AGG 0.554871 5.3:-75239592 None:intergenic
ATTAGGAGGTTACCTTCTTG+TGG 0.557219 5.3:-75239622 None:intergenic
ATGATCAAGGTCAGCTTCAA+CGG 0.557580 5.3:-75239551 None:intergenic
GATGTTCGTCATCTTCTCTC+CGG 0.559574 5.3:+75239478 MS.gene63793:CDS
GAAAGACAAAGCATAAGAGC+AGG 0.559960 5.3:+75245213 MS.gene63793:CDS
ATCCAGTAAACATGAAGAGG+AGG 0.560824 5.3:+75244719 MS.gene63793:CDS
TCAGATGCAGCCAAGAAGGA+TGG 0.564145 5.3:+75242999 MS.gene63793:CDS
GACTATTGGCAATTTAAGGA+AGG 0.564157 5.3:+75244020 MS.gene63793:CDS
CAACGACAAGTATTCTCATA+GGG 0.564384 5.3:+75244911 MS.gene63793:CDS
CTTCTCGACGTCATCGTGGA+GGG 0.566142 5.3:+75245027 MS.gene63793:CDS
AATTCCCACCATCACTTCCA+AGG 0.566204 5.3:-75244197 None:intergenic
AGTATTCTCATAGGGAGAGT+AGG 0.570248 5.3:+75244919 MS.gene63793:CDS
ACATGAAGAGGAGGAAGAAG+AGG 0.571410 5.3:+75244728 MS.gene63793:CDS
ATCACTGTCCTTTGTCTCAG+TGG 0.571841 5.3:-75242022 None:intergenic
CCTATGAGAATACTTGTCGT+TGG 0.572072 5.3:-75244910 None:intergenic
CAGTCTAAGTTACAAGGCAA+GGG 0.572361 5.3:+75243916 MS.gene63793:intron
CAGGTCTCATGCTGAAAGAG+AGG 0.572770 5.3:+75245232 MS.gene63793:CDS
GAGGCGAGGAGGAATTGGAC+CGG 0.573199 5.3:-75239497 None:intergenic
CTGCTACTTCTGCATCATCA+GGG 0.573669 5.3:+75242955 MS.gene63793:CDS
ATTGGCAATTTAAGGAAGGA+TGG 0.577793 5.3:+75244024 MS.gene63793:CDS
GCTGTTCGACGACGACGGCA+TGG 0.578419 5.3:+75239393 MS.gene63793:CDS
CTATGGAAATGAAGAGGATG+AGG 0.578886 5.3:+75242872 MS.gene63793:CDS
GCCAATCAGAAATTATTCTG+AGG 0.579591 5.3:+75242658 MS.gene63793:CDS
CCTTGAGAGAAACGCACATG+TGG 0.582859 5.3:+75242920 MS.gene63793:CDS
AAGATCCAGTAAACATGAAG+AGG 0.583036 5.3:+75244716 MS.gene63793:CDS
GCATGACAGCTCCTCTGAGG+AGG 0.584258 5.3:+75244941 MS.gene63793:CDS
CATGACAGCTCCTCTGAGGA+GGG 0.585607 5.3:+75244942 MS.gene63793:CDS
GTCGATCTTCACACAGAAGT+CGG 0.586547 5.3:+75244829 MS.gene63793:CDS
CCAATCAGAAATTATTCTGA+GGG 0.588348 5.3:+75242659 MS.gene63793:CDS
TTTAGTCATATGTGCTTCAG+AGG 0.590900 5.3:-75244364 None:intergenic
GGCGGCGTTCGTGAACTCAC+CGG 0.592580 5.3:+75239414 MS.gene63793:CDS
TTAAGACAGCAACTTCAGCT+AGG 0.592901 5.3:+75243096 MS.gene63793:CDS
GCCAACGACTTCGAGATCCA+TGG 0.595544 5.3:-75239359 None:intergenic
CATGAAGAACAACCACAAGA+AGG 0.597495 5.3:+75239610 MS.gene63793:CDS
GGTCCAGGCCTTGGAAGTGA+TGG 0.598727 5.3:+75244189 MS.gene63793:CDS
TCTTCTCGACGTCATCGTGG+AGG 0.603922 5.3:+75245026 MS.gene63793:CDS
TATTGCAGCAGCAGGTGAGG+CGG 0.603948 5.3:+75244338 MS.gene63793:CDS
AGACCCTGCAGTTGAGATGA+CGG 0.604995 5.3:-75244240 None:intergenic
GGAAATGAAGAGGATGAGGA+TGG 0.606153 5.3:+75242876 MS.gene63793:CDS
AAGGACAGTGATACTGACTC+TGG 0.606944 5.3:+75242033 MS.gene63793:CDS
ACCATTAGACCCTGAATCTG+GGG 0.607510 5.3:-75243135 None:intergenic
GGTTGGGCGGGCTAGCAGGG+AGG 0.607980 5.3:+75245307 MS.gene63793:CDS
CTGCCAGAAGCACACTCCAG+CGG 0.608202 5.3:+75243939 MS.gene63793:CDS
ATGTCTATGCTCATCATCAG+AGG 0.608642 5.3:-75245099 None:intergenic
AGAAAATAAAGAAGATACAA+GGG 0.609415 5.3:+75244773 MS.gene63793:CDS
TTCTGACCTACCAAATGACA+TGG 0.612916 5.3:+75243975 MS.gene63793:CDS
TTACTGTTGATAATAATGAA+AGG 0.613626 5.3:+75244670 MS.gene63793:CDS
AGTTCAATCTTAGATGTACT+GGG 0.616112 5.3:-75243182 None:intergenic
GAACCTGAAAGTCCAGAGCT+CGG 0.616412 5.3:-75244501 None:intergenic
TTCACACAGAAGTCGGGACA+GGG 0.618957 5.3:+75244836 MS.gene63793:CDS
AGATAAAAGTCACAAGTCTG+AGG 0.619109 5.3:+75244596 MS.gene63793:CDS
TCGGGACAGGGATGCAGACA+GGG 0.619397 5.3:+75244848 MS.gene63793:CDS
GTTACTTCAGGTGACTGAGA+GGG 0.621004 5.3:-75245362 None:intergenic
ACTATCTTTAAGTCAGATGG+AGG 0.622930 5.3:-75243218 None:intergenic
CGCTCTTCTCGACGTCATCG+TGG 0.626116 5.3:+75245023 MS.gene63793:CDS
CGTCGAACAGCATCGCGTGA+CGG 0.626865 5.3:-75239381 None:intergenic
TGAGTGCGGCGTTTGAGGCG+AGG 0.628823 5.3:-75239511 None:intergenic
CACGATGACGTCGAGAAGAG+CGG 0.629753 5.3:-75245022 None:intergenic
TTGCCGTCATCTCAACTGCA+GGG 0.630505 5.3:+75244237 MS.gene63793:CDS
CAGGCCTTGGAAGTGATGGT+GGG 0.634992 5.3:+75244193 MS.gene63793:CDS
ATTATTCTGAGGGTGAAACA+AGG 0.639145 5.3:+75242669 MS.gene63793:CDS
ATTCTTCAGGCAGCTACTAG+GGG 0.639195 5.3:+75244117 MS.gene63793:CDS
CTGATGATGAGCATAGTCAC+CGG 0.643482 5.3:+75245186 MS.gene63793:CDS
TGCTACTTCTGCATCATCAG+GGG 0.643605 5.3:+75242956 MS.gene63793:CDS
CTTGCTGGTAAAGAAAGGGA+AGG 0.647067 5.3:+75244543 MS.gene63793:CDS
AACTACAGTTAGCATTCATG+CGG 0.648226 5.3:+75244080 MS.gene63793:CDS
TAGGCATGACAGCTCCTCTG+AGG 0.652290 5.3:+75244938 MS.gene63793:CDS
GGTAGGTCAGAACTCATAGA+CGG 0.655742 5.3:-75243964 None:intergenic
ACATCGCAATCTGAATGCAG+AGG 0.656192 5.3:+75244269 MS.gene63793:CDS
AGCTGCCTGAAGAATAGCTG+CGG 0.660615 5.3:-75244109 None:intergenic
TCCATGGATCTCGAAGTCGT+TGG 0.661310 5.3:+75239358 None:intergenic
AGTTACTTCAGGTGACTGAG+AGG 0.662084 5.3:-75245363 None:intergenic
GCGATGCTGTTCGACGACGA+CGG 0.663625 5.3:+75239388 MS.gene63793:CDS
ATCTGTCTATGGAAATGAAG+AGG 0.664551 5.3:+75242866 MS.gene63793:CDS
GTTCGACGACGACGGCATGG+CGG 0.666203 5.3:+75239396 MS.gene63793:CDS
TGAATTATTCAAGTCTACAA+GGG 0.670470 5.3:+75245337 MS.gene63793:CDS
TCGATGCTCACCCTCCTCAG+AGG 0.670941 5.3:-75244952 None:intergenic
CTTGAGAGAAACGCACATGT+GGG 0.674979 5.3:+75242921 MS.gene63793:CDS
GTGCGGCGTTTGAGGCGAGG+AGG 0.676156 5.3:-75239508 None:intergenic
GCTTCAACGGTAGATTGCAG+CGG 0.682299 5.3:-75239538 None:intergenic
CAGGAGCTGGATCAAACAGG+AGG 0.687441 5.3:+75242825 MS.gene63793:CDS
AGACAAGTCACAAGTAAGCG+AGG 0.688184 5.3:+75245286 MS.gene63793:CDS
CCTGAAAGTCCAGAGCTCGG+TGG 0.714414 5.3:-75244498 None:intergenic
CAGACAGGGACAGAAACAGG+CGG 0.718480 5.3:+75244862 MS.gene63793:CDS
AGGGTGAGCATCGACACTTG+AGG 0.725403 5.3:+75244961 MS.gene63793:CDS
ATTGCAGCGGATGATGAGTG+CGG 0.738074 5.3:-75239525 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAAAAATTAAAAATTTC+TGG + chr5.3:75240443-75240462 MS.gene63793:intron 10.0%
!! TAAATTTAATTGACATATAT+GGG - chr5.3:75240722-75240741 None:intergenic 10.0%
!! TTACTAAAAATTTCTAAATT+AGG - chr5.3:75244153-75244172 None:intergenic 10.0%
!!! AATAAACTTTATCAAAATTT+TGG - chr5.3:75240939-75240958 None:intergenic 10.0%
!!! TAATTTAGAAATTTTTAGTA+AGG + chr5.3:75244152-75244171 MS.gene63793:CDS 10.0%
!! CTAAATTTAATTGACATATA+TGG - chr5.3:75240723-75240742 None:intergenic 15.0%
!!! TAAAATTTTGTTAGAATTGA+AGG + chr5.3:75239785-75239804 MS.gene63793:intron 15.0%
!!! TCAATTCTAACAAAATTTTA+CGG - chr5.3:75239785-75239804 None:intergenic 15.0%
!!! TGTCAATTAAATTTAGATTT+TGG + chr5.3:75240727-75240746 MS.gene63793:intron 15.0%
!!! TTTTGATAAAGTTTATTGAA+TGG + chr5.3:75240942-75240961 MS.gene63793:intron 15.0%
!! AAAATGCAAATAAATATGAG+TGG + chr5.3:75240308-75240327 MS.gene63793:intron 20.0%
!! AAGAAAATAAAGAAGATACA+AGG + chr5.3:75244772-75244791 MS.gene63793:CDS 20.0%
!! AAGGTTTATAATGTTATTCT+CGG - chr5.3:75240528-75240547 None:intergenic 20.0%
!! AATCATTATCTAAACAAACA+CGG - chr5.3:75241939-75241958 None:intergenic 20.0%
!! AGAAAATAAAGAAGATACAA+GGG + chr5.3:75244773-75244792 MS.gene63793:CDS 20.0%
!! AGAATAACCAACATAATAAA+AGG - chr5.3:75243549-75243568 None:intergenic 20.0%
!! ATGAATATTCAAAGCAATAT+TGG + chr5.3:75243711-75243730 MS.gene63793:intron 20.0%
!! ATTATGTGTTAATTAATCTG+TGG + chr5.3:75243587-75243606 MS.gene63793:intron 20.0%
!! CCAAATAAACTAAAACAAAA+TGG - chr5.3:75241836-75241855 None:intergenic 20.0%
!! GAATAACCAACATAATAAAA+GGG - chr5.3:75243548-75243567 None:intergenic 20.0%
!! GTAGATAGTCTAATTAATAA+GGG + chr5.3:75240091-75240110 MS.gene63793:intron 20.0%
!! GTGTAATTTGATTAATTTCA+AGG + chr5.3:75243849-75243868 MS.gene63793:intron 20.0%
!! TGATTATTCAAGTATATATG+AGG + chr5.3:75242431-75242450 MS.gene63793:intron 20.0%
!! TGTAGATAGTCTAATTAATA+AGG + chr5.3:75240090-75240109 MS.gene63793:intron 20.0%
!!! AATTTTGGTTATTTTGAGTT+TGG - chr5.3:75240924-75240943 None:intergenic 20.0%
!!! CATAACACTAATTTTAAAGA+GGG - chr5.3:75242514-75242533 None:intergenic 20.0%
!!! CCATTTTGTTTTAGTTTATT+TGG + chr5.3:75241833-75241852 MS.gene63793:intron 20.0%
!!! GGATTTTTTTTTTCTTTTCA+CGG + chr5.3:75241662-75241681 MS.gene63793:intron 20.0%
!!! GGTTAAATTTTAGATTTCAT+TGG + chr5.3:75240241-75240260 MS.gene63793:intron 20.0%
!!! TTACTGTTGATAATAATGAA+AGG + chr5.3:75244670-75244689 MS.gene63793:CDS 20.0%
!!! TTTTTAATTTTTTTGTTCCC+AGG - chr5.3:75240439-75240458 None:intergenic 20.0%
! AAAAAAACTAAACACTGTCT+TGG - chr5.3:75241710-75241729 None:intergenic 25.0%
! AAAAAACTAAACACTGTCTT+GGG - chr5.3:75241709-75241728 None:intergenic 25.0%
! AAAAAGTTCCTGTTATAAAG+CGG + chr5.3:75243054-75243073 MS.gene63793:CDS 25.0%
! AAACATGAAAATCACATGAT+CGG - chr5.3:75242133-75242152 None:intergenic 25.0%
! AAATAAATATGAGTGGTAGT+GGG + chr5.3:75240315-75240334 MS.gene63793:intron 25.0%
! ACTAGAAGAATGAATGAATT+AGG - chr5.3:75239642-75239661 None:intergenic 25.0%
! AGGTTTATAATGTTATTCTC+GGG - chr5.3:75240527-75240546 None:intergenic 25.0%
! AGTTCATCTTAAAAAATGGA+AGG + chr5.3:75243258-75243277 MS.gene63793:CDS 25.0%
! ATAACTATCTTTAAGTCAGA+TGG - chr5.3:75243224-75243243 None:intergenic 25.0%
! CATGAAATCAAAAGGAAAAA+AGG - chr5.3:75242301-75242320 None:intergenic 25.0%
! GGACTAATTGATATATCTTT+CGG + chr5.3:75241611-75241630 MS.gene63793:intron 25.0%
! GTGTGTTGAATAATTTAGTT+GGG + chr5.3:75241085-75241104 MS.gene63793:intron 25.0%
! GTTAGAATTGAAGGTTAATT+AGG + chr5.3:75239794-75239813 MS.gene63793:intron 25.0%
! GTTGAGTTCATCTTAAAAAA+TGG + chr5.3:75243254-75243273 MS.gene63793:CDS 25.0%
! GTTTGTTTAGATAATGATTC+AGG + chr5.3:75241940-75241959 MS.gene63793:intron 25.0%
! TAAATTATTCAACACACACA+GGG - chr5.3:75241082-75241101 None:intergenic 25.0%
! TATCTACATTTAATCCACTA+AGG - chr5.3:75240078-75240097 None:intergenic 25.0%
! TCAAAACATGAAACAAACAT+GGG + chr5.3:75240476-75240495 MS.gene63793:intron 25.0%
! TCAACAAGAAACCTAAAATA+CGG - chr5.3:75242741-75242760 None:intergenic 25.0%
! TGAATTATTCAAGTCTACAA+GGG + chr5.3:75245337-75245356 MS.gene63793:CDS 25.0%
! TGTGTGTTGAATAATTTAGT+TGG + chr5.3:75241084-75241103 MS.gene63793:intron 25.0%
! TTCAAAACATGAAACAAACA+TGG + chr5.3:75240475-75240494 MS.gene63793:intron 25.0%
!! AAAAGTATAAAAATCATGCG+TGG + chr5.3:75240405-75240424 MS.gene63793:intron 25.0%
!! CTATATCGTTTATTCGATTT+TGG + chr5.3:75239680-75239699 MS.gene63793:intron 25.0%
!! TAAGTATGATATCGATTAGA+AGG - chr5.3:75243344-75243363 None:intergenic 25.0%
!! TGAATAATTTAGTTGGGTTT+TGG + chr5.3:75241091-75241110 MS.gene63793:intron 25.0%
!! TGTTTTCAAAACAAACAAGT+AGG + chr5.3:75240845-75240864 MS.gene63793:intron 25.0%
!! TTACAAATTTTCCATCAACA+TGG - chr5.3:75245423-75245442 None:intergenic 25.0%
!!! CTTTTTCTTTCAAAGGTATT+TGG - chr5.3:75243040-75243059 None:intergenic 25.0%
!!! GCATAACACTAATTTTAAAG+AGG - chr5.3:75242515-75242534 None:intergenic 25.0%
!!! TCCTTTTGATTTCATGAAAA+GGG + chr5.3:75242305-75242324 MS.gene63793:intron 25.0%
!!! TTCCTTTTGATTTCATGAAA+AGG + chr5.3:75242304-75242323 MS.gene63793:intron 25.0%
!!! TTTTTTTTTTCTTTTCACGG+TGG + chr5.3:75241665-75241684 MS.gene63793:intron 25.0%
AAATCTTGCTGGTAAAGAAA+GGG + chr5.3:75244539-75244558 MS.gene63793:CDS 30.0%
AACCAAACAGAACTGTTATA+AGG - chr5.3:75241002-75241021 None:intergenic 30.0%
AAGAAAATGAAAGTCATTCC+TGG - chr5.3:75240209-75240228 None:intergenic 30.0%
AAGGAGATAATCCAACATTT+GGG + chr5.3:75242688-75242707 MS.gene63793:CDS 30.0%
ACATTAAAATGCAAGCTTCA+GGG + chr5.3:75241053-75241072 MS.gene63793:intron 30.0%
ACCAAACAGAACTGTTATAA+GGG - chr5.3:75241001-75241020 None:intergenic 30.0%
ACCAACATAATAAAAGGGAA+TGG - chr5.3:75243543-75243562 None:intergenic 30.0%
ACCTCAAAATCAGTTTAGTT+TGG + chr5.3:75241450-75241469 MS.gene63793:intron 30.0%
AGAAAGCTTACTTCATAATC+TGG + chr5.3:75242080-75242099 MS.gene63793:CDS 30.0%
AGAAGAATGAATGAATTAGG+AGG - chr5.3:75239639-75239658 None:intergenic 30.0%
AGATGACTATTGGCAATTTA+AGG + chr5.3:75244016-75244035 MS.gene63793:CDS 30.0%
AGATTATGAAGTAAGCTTTC+TGG - chr5.3:75242081-75242100 None:intergenic 30.0%
AGGAAGTTGTAGGAAAATTT+AGG + chr5.3:75240117-75240136 MS.gene63793:intron 30.0%
AGGGTACATATGTTATTCTA+AGG + chr5.3:75242202-75242221 MS.gene63793:intron 30.0%
AGTCTAATTAATAAGGGTAG+AGG + chr5.3:75240097-75240116 MS.gene63793:intron 30.0%
AGTTCAATCTTAGATGTACT+GGG - chr5.3:75243185-75243204 None:intergenic 30.0%
ATAATGAAAGGCGATCAAAA+AGG + chr5.3:75244682-75244701 MS.gene63793:CDS 30.0%
ATGTTCTGTTATTCGATGAA+AGG + chr5.3:75240689-75240708 MS.gene63793:intron 30.0%
ATTAACTGTTTATCCAAACG+AGG - chr5.3:75239820-75239839 None:intergenic 30.0%
ATTATGCGAAGTGAGAAATT+AGG + chr5.3:75243454-75243473 MS.gene63793:intron 30.0%
ATTGTTTAACCAATGTGACT+AGG + chr5.3:75242167-75242186 MS.gene63793:intron 30.0%
CAAAACATGAAACAAACATG+GGG + chr5.3:75240477-75240496 MS.gene63793:intron 30.0%
CAAATAAATATGAGTGGTAG+TGG + chr5.3:75240314-75240333 MS.gene63793:intron 30.0%
CCAACATAATAAAAGGGAAT+GGG - chr5.3:75243542-75243561 None:intergenic 30.0%
CCAATCAGAAATTATTCTGA+GGG + chr5.3:75242659-75242678 MS.gene63793:CDS 30.0%
CCATCAGTATAATGATAAAG+AGG - chr5.3:75240766-75240785 None:intergenic 30.0%
CCTCTTTATCATTATACTGA+TGG + chr5.3:75240763-75240782 MS.gene63793:intron 30.0%
CCTGAAATTGTATATGGAAA+AGG - chr5.3:75241119-75241138 None:intergenic 30.0%
CTAAATTATTCAACACACAC+AGG - chr5.3:75241083-75241102 None:intergenic 30.0%
CTGAATTATTCAAGTCTACA+AGG + chr5.3:75245336-75245355 MS.gene63793:CDS 30.0%
GAGAAATTCAAGATGACTAT+TGG + chr5.3:75244006-75244025 MS.gene63793:CDS 30.0%
GCTGGAAAAGAAAAACAAAA+AGG - chr5.3:75242575-75242594 None:intergenic 30.0%
GCTTTATAAAATGTTCCTTC+TGG + chr5.3:75243752-75243771 MS.gene63793:intron 30.0%
GGAAGTTGTAGGAAAATTTA+GGG + chr5.3:75240118-75240137 MS.gene63793:intron 30.0%
GGAGATAGCTATAACTTATA+TGG - chr5.3:75239932-75239951 None:intergenic 30.0%
TAGTTCAATCTTAGATGTAC+TGG - chr5.3:75243186-75243205 None:intergenic 30.0%
TATAAGTTATAGCTATCTCC+TGG + chr5.3:75239932-75239951 MS.gene63793:intron 30.0%
TATACCTCTTGTGAGAAAAT+GGG + chr5.3:75242368-75242387 MS.gene63793:intron 30.0%
TATCCTACAATTGAAACTCA+GGG - chr5.3:75241215-75241234 None:intergenic 30.0%
TCAGAAACATTAGTTACTTC+AGG - chr5.3:75245377-75245396 None:intergenic 30.0%
TCATCTTGAATTTCTCTTTC+CGG - chr5.3:75244002-75244021 None:intergenic 30.0%
TGTTTACAGTCTAAGTTACA+AGG + chr5.3:75243910-75243929 MS.gene63793:intron 30.0%
TTATCTAAACAAACACGGAA+AGG - chr5.3:75241934-75241953 None:intergenic 30.0%
! ACATTGGTTAAACAATGAGA+GGG - chr5.3:75242163-75242182 None:intergenic 30.0%
! ACTGATGGCTTTTATATGTT+TGG + chr5.3:75240778-75240797 MS.gene63793:intron 30.0%
! AGAAGGTTTTGCTGAAATTT+TGG + chr5.3:75240578-75240597 MS.gene63793:intron 30.0%
! ATCATCTTCATCCGTATTTT+AGG + chr5.3:75242727-75242746 MS.gene63793:CDS 30.0%
! CATGAACATGTCTTTTCAAT+TGG + chr5.3:75241576-75241595 MS.gene63793:intron 30.0%
! CCTTTTCCATATACAATTTC+AGG + chr5.3:75241116-75241135 MS.gene63793:intron 30.0%
! TCATTTAAGAGTACAGATTC+TGG + chr5.3:75241385-75241404 MS.gene63793:intron 30.0%
! TCTGAGTTATCAGTATTGAA+TGG - chr5.3:75244579-75244598 None:intergenic 30.0%
! TTCAATTGGTTCTCATCATT+TGG + chr5.3:75241590-75241609 MS.gene63793:intron 30.0%
! TTCGATTTTGGATTCTGTTA+TGG + chr5.3:75239692-75239711 MS.gene63793:intron 30.0%
! TTTCGTAGAGAGATTTTAGA+AGG + chr5.3:75241318-75241337 MS.gene63793:intron 30.0%
! TTTTTATTCCTACGCTAACA+GGG - chr5.3:75240389-75240408 None:intergenic 30.0%
!! ACAGGAACTTTTTCTTTCAA+AGG - chr5.3:75243047-75243066 None:intergenic 30.0%
!! ATTTTAGAAGGAAGTAAAGC+TGG + chr5.3:75241330-75241349 MS.gene63793:intron 30.0%
!! CTTCTAAAAGTGTTTCCTAA+GGG - chr5.3:75240563-75240582 None:intergenic 30.0%
!! TATATCTTTCGGTGCAATTT+TGG + chr5.3:75241622-75241641 MS.gene63793:intron 30.0%
!! TGGTTGATTTTCGTGAAATT+AGG + chr5.3:75239712-75239731 MS.gene63793:intron 30.0%
!!! ATGTGATAAGCTGTTTTTGT+AGG + chr5.3:75239993-75240012 MS.gene63793:intron 30.0%
!!! CCTTTTGATTTCATGAAAAG+GGG + chr5.3:75242306-75242325 MS.gene63793:intron 30.0%
!!! GTTTTAAGTTGAGGTTAGAT+AGG + chr5.3:75239742-75239761 MS.gene63793:intron 30.0%
!!! TAGGTTGAGTTTTATTCTCA+TGG + chr5.3:75240347-75240366 MS.gene63793:intron 30.0%
AAAGAAGTTCTTGTGACTCA+AGG + chr5.3:75242259-75242278 MS.gene63793:intron 35.0%
AACTACAGTTAGCATTCATG+CGG + chr5.3:75244080-75244099 MS.gene63793:CDS 35.0%
AAGATCCAGTAAACATGAAG+AGG + chr5.3:75244716-75244735 MS.gene63793:CDS 35.0%
ACAACAATCTCTACATTTGC+AGG + chr5.3:75241747-75241766 MS.gene63793:intron 35.0%
ACACAAACAGATGAATTGCA+AGG - chr5.3:75243427-75243446 None:intergenic 35.0%
ACCCTTATAACAGTTCTGTT+TGG + chr5.3:75240997-75241016 MS.gene63793:intron 35.0%
ACGATGTAGAACATGATTCA+AGG + chr5.3:75243489-75243508 MS.gene63793:intron 35.0%
ACTATCTTTAAGTCAGATGG+AGG - chr5.3:75243221-75243240 None:intergenic 35.0%
AGATAAAAGTCACAAGTCTG+AGG + chr5.3:75244596-75244615 MS.gene63793:CDS 35.0%
AGTCATGACTCAGTGATTTA+AGG + chr5.3:75241290-75241309 MS.gene63793:intron 35.0%
AGTTCATCGAACCTATTCTT+TGG + chr5.3:75241501-75241520 MS.gene63793:intron 35.0%
ATCCTACAATTGAAACTCAG+GGG - chr5.3:75241214-75241233 None:intergenic 35.0%
ATCTGTCTATGGAAATGAAG+AGG + chr5.3:75242866-75242885 MS.gene63793:CDS 35.0%
ATGTATTCATATATACCGCC+TGG + chr5.3:75242483-75242502 MS.gene63793:intron 35.0%
ATGTCTAAGTTTCAGATGCT+TGG + chr5.3:75242231-75242250 MS.gene63793:intron 35.0%
ATTCCTGGAAATAATGTTCC+TGG - chr5.3:75240194-75240213 None:intergenic 35.0%
ATTCTCGGGAATATGAGATA+AGG - chr5.3:75240513-75240532 None:intergenic 35.0%
ATTGGCAATTTAAGGAAGGA+TGG + chr5.3:75244024-75244043 MS.gene63793:CDS 35.0%
CAAAATTAGAGCCATGTTGA+TGG + chr5.3:75245409-75245428 MS.gene63793:CDS 35.0%
CAACGACAAGTATTCTCATA+GGG + chr5.3:75244911-75244930 MS.gene63793:CDS 35.0%
CAAGGAGATAATCCAACATT+TGG + chr5.3:75242687-75242706 MS.gene63793:CDS 35.0%
CAATTATCACCTAGTCACAT+TGG - chr5.3:75242179-75242198 None:intergenic 35.0%
CACAAACAGATGAATTGCAA+GGG - chr5.3:75243426-75243445 None:intergenic 35.0%
CACATTAAAATGCAAGCTTC+AGG + chr5.3:75241052-75241071 MS.gene63793:intron 35.0%
CATGTTTACTGGATCTTGAA+CGG - chr5.3:75244713-75244732 None:intergenic 35.0%
CATTAAAATGCAAGCTTCAG+GGG + chr5.3:75241054-75241073 MS.gene63793:intron 35.0%
CCCTCAGAATAATTTCTGAT+TGG - chr5.3:75242662-75242681 None:intergenic 35.0%
CTATACCTCTTGTGAGAAAA+TGG + chr5.3:75242367-75242386 MS.gene63793:intron 35.0%
CTATCCTACAATTGAAACTC+AGG - chr5.3:75241216-75241235 None:intergenic 35.0%
GAAATCTTGCTGGTAAAGAA+AGG + chr5.3:75244538-75244557 MS.gene63793:CDS 35.0%
GACTAGGTGATAATTGTCTA+GGG + chr5.3:75242183-75242202 MS.gene63793:intron 35.0%
GACTATTGGCAATTTAAGGA+AGG + chr5.3:75244020-75244039 MS.gene63793:CDS 35.0%
GATTAGAAGGCAGAAGAAAT+GGG - chr5.3:75243331-75243350 None:intergenic 35.0%
GCCAATCAGAAATTATTCTG+AGG + chr5.3:75242658-75242677 MS.gene63793:CDS 35.0%
GCTTATTTGAACTTATCCAC+TGG - chr5.3:75240041-75240060 None:intergenic 35.0%
GGATGCAATCTAATATGCTA+CGG + chr5.3:75241768-75241787 MS.gene63793:intron 35.0%
GTAGGTGTATGATATTGTTG+CGG + chr5.3:75241875-75241894 MS.gene63793:intron 35.0%
GTTCATCGAACCTATTCTTT+GGG + chr5.3:75241502-75241521 MS.gene63793:intron 35.0%
TAGCATTTACCTCGTGAATA+AGG + chr5.3:75240608-75240627 MS.gene63793:intron 35.0%
TCAAATAAGCCAATCCAAAC+AGG + chr5.3:75240051-75240070 MS.gene63793:intron 35.0%
TGACTAGGTGATAATTGTCT+AGG + chr5.3:75242182-75242201 MS.gene63793:intron 35.0%
TGTGGTTGTTCTTCATGAAT+CGG - chr5.3:75239607-75239626 None:intergenic 35.0%
TTCAAGTGCAGTTCATAGTT+TGG - chr5.3:75240901-75240920 None:intergenic 35.0%
TTCCTGGAAATAATGTTCCT+GGG - chr5.3:75240193-75240212 None:intergenic 35.0%
TTGCAATTCATCTGTTTGTG+TGG + chr5.3:75243426-75243445 MS.gene63793:intron 35.0%
TTGTATTTGATTCAGCCAGA+AGG - chr5.3:75243770-75243789 None:intergenic 35.0%
TTTAGTCATATGTGCTTCAG+AGG - chr5.3:75244367-75244386 None:intergenic 35.0%
TTTGGACAAGAATAGAAGTC+AGG + chr5.3:75242806-75242825 MS.gene63793:CDS 35.0%
! AGGTCACTAGTATTTTCAGT+TGG - chr5.3:75242903-75242922 None:intergenic 35.0%
! ATTATTCTGAGGGTGAAACA+AGG + chr5.3:75242669-75242688 MS.gene63793:CDS 35.0%
! CAAGTAAGGATGTTTTCAAC+TGG + chr5.3:75241807-75241826 MS.gene63793:intron 35.0%
! CACATTGGTTAAACAATGAG+AGG - chr5.3:75242164-75242183 None:intergenic 35.0%
! CCCATTCCCTTTTATTATGT+TGG + chr5.3:75243539-75243558 MS.gene63793:intron 35.0%
! CCCCTTTTCATGAAATCAAA+AGG - chr5.3:75242309-75242328 None:intergenic 35.0%
! CCTTAGGAAACACTTTTAGA+AGG + chr5.3:75240561-75240580 MS.gene63793:intron 35.0%
! CTGGAGAACTTCTGAAAATA+AGG + chr5.3:75239951-75239970 MS.gene63793:intron 35.0%
! CTTTTTATTCCTACGCTAAC+AGG - chr5.3:75240390-75240409 None:intergenic 35.0%
! GTGAATAAGGCATTAAGGTT+TGG + chr5.3:75240621-75240640 MS.gene63793:intron 35.0%
! TGCTAACTGTAGTTTGAGAT+TGG - chr5.3:75244074-75244093 None:intergenic 35.0%
! TTCTTTTCACGGTGGTTTTT+TGG + chr5.3:75241673-75241692 MS.gene63793:intron 35.0%
! TTTAGGGTGTGTTTGTTTCA+AGG + chr5.3:75240134-75240153 MS.gene63793:intron 35.0%
!! CCTTCTAAAAGTGTTTCCTA+AGG - chr5.3:75240564-75240583 None:intergenic 35.0%
!! CTTATTTTCAGAAGTTCTCC+AGG - chr5.3:75239953-75239972 None:intergenic 35.0%
!! GCCAAACTAAACTGATTTTG+AGG - chr5.3:75241454-75241473 None:intergenic 35.0%
!!! ATTTTTAGTAAGGCGTCAAG+TGG + chr5.3:75244162-75244181 MS.gene63793:CDS 35.0%
!!! CATCAACATGGCTCTAATTT+TGG - chr5.3:75245411-75245430 None:intergenic 35.0%
!!! CTAAACTGATTTTGAGGTTC+AGG - chr5.3:75241448-75241467 None:intergenic 35.0%
!!! GGTTTCGTTGTTTTAAGTTG+AGG + chr5.3:75239733-75239752 MS.gene63793:intron 35.0%
AAACTAAACACTGTCTTGGG+CGG - chr5.3:75241706-75241725 None:intergenic 40.0%
AAAGATGACAAAACCGATGC+AGG + chr5.3:75242777-75242796 MS.gene63793:CDS 40.0%
AAGGTTAATTAGGCCTCGTT+TGG + chr5.3:75239804-75239823 MS.gene63793:intron 40.0%
ACAGAACTGTTATAAGGGTG+TGG - chr5.3:75240996-75241015 None:intergenic 40.0%
ACAGTCTAAGTTACAAGGCA+AGG + chr5.3:75243915-75243934 MS.gene63793:intron 40.0%
ACATGTTCATGCTCGTTTGT+AGG - chr5.3:75241567-75241586 None:intergenic 40.0%
ACTTCAGCTAGGACAAAAAC+AGG + chr5.3:75243107-75243126 MS.gene63793:CDS 40.0%
AGAAATGCTTCCATCCTTCT+TGG - chr5.3:75243012-75243031 None:intergenic 40.0%
AGTATTCTCATAGGGAGAGT+AGG + chr5.3:75244919-75244938 MS.gene63793:CDS 40.0%
AGTTCTTCAAACTGCTGAAG+AGG + chr5.3:75243373-75243392 MS.gene63793:CDS 40.0%
ATAAGGGTAGAGGAAGTTGT+AGG + chr5.3:75240107-75240126 MS.gene63793:intron 40.0%
ATACAAACTGAACCATGACG+AGG + chr5.3:75241541-75241560 MS.gene63793:intron 40.0%
ATCCAGTAAACATGAAGAGG+AGG + chr5.3:75244719-75244738 MS.gene63793:CDS 40.0%
ATCTGATGTAGCTTCTCGTT+TGG - chr5.3:75242600-75242619 None:intergenic 40.0%
ATGAGAATACTTGTCGTTGG+AGG - chr5.3:75244910-75244929 None:intergenic 40.0%
ATGATCAAGGTCAGCTTCAA+CGG - chr5.3:75239554-75239573 None:intergenic 40.0%
ATGTCTATGCTCATCATCAG+AGG - chr5.3:75245102-75245121 None:intergenic 40.0%
ATTAGGAGGTTACCTTCTTG+TGG - chr5.3:75239625-75239644 None:intergenic 40.0%
CAAACAGAAACTTATGCCAG+TGG + chr5.3:75240022-75240041 MS.gene63793:intron 40.0%
CAAGGCTATTGCAGAAAAAG+TGG + chr5.3:75244314-75244333 MS.gene63793:CDS 40.0%
CAGTCTAAGTTACAAGGCAA+GGG + chr5.3:75243916-75243935 MS.gene63793:intron 40.0%
CATGAAGAACAACCACAAGA+AGG + chr5.3:75239610-75239629 MS.gene63793:CDS 40.0%
CATGCGTGGTTAAAATTCCT+GGG + chr5.3:75240419-75240438 MS.gene63793:intron 40.0%
CATGTGTCAGACTACAAGTA+AGG + chr5.3:75241793-75241812 MS.gene63793:intron 40.0%
CCAAACTGAACCCAAAGAAT+AGG - chr5.3:75241515-75241534 None:intergenic 40.0%
CCAACGACAAGTATTCTCAT+AGG + chr5.3:75244910-75244929 MS.gene63793:CDS 40.0%
CCATGATAAAAAGTGGAGCT+GGG + chr5.3:75244436-75244455 MS.gene63793:CDS 40.0%
CCTATGAGAATACTTGTCGT+TGG - chr5.3:75244913-75244932 None:intergenic 40.0%
CGATTAGAAGGCAGAAGAAA+TGG - chr5.3:75243332-75243351 None:intergenic 40.0%
CTATGGAAATGAAGAGGATG+AGG + chr5.3:75242872-75242891 MS.gene63793:CDS 40.0%
CTGATGTGTTGAAGATGGTT+TGG + chr5.3:75240967-75240986 MS.gene63793:intron 40.0%
CTTGAAACAAACACACCCTT+AGG + chr5.3:75240545-75240564 MS.gene63793:intron 40.0%
GAAAGACAAAGCATAAGAGC+AGG + chr5.3:75245213-75245232 MS.gene63793:CDS 40.0%
GACTCGTTAGAGATCTGAAT+CGG - chr5.3:75241274-75241293 None:intergenic 40.0%
GCAATGTTTGTCAGCAAACA+TGG + chr5.3:75242633-75242652 MS.gene63793:CDS 40.0%
GCTGAGATTAGAAATCTTGC+TGG + chr5.3:75244528-75244547 MS.gene63793:CDS 40.0%
GTGGCACCTGAAATTGTATA+TGG - chr5.3:75241125-75241144 None:intergenic 40.0%
TAATCCACTAAGGTCCTGTT+TGG - chr5.3:75240068-75240087 None:intergenic 40.0%
TACGGATGAAGATGATGATC+AGG - chr5.3:75242723-75242742 None:intergenic 40.0%
TATGCTTTGTCTTTCTGCTC+CGG - chr5.3:75245208-75245227 None:intergenic 40.0%
TATTCTTCAGGCAGCTACTA+GGG + chr5.3:75244116-75244135 MS.gene63793:CDS 40.0%
TCATGAATCGGAGAAGAAGA+AGG - chr5.3:75239595-75239614 None:intergenic 40.0%
TCATGCGTGGTTAAAATTCC+TGG + chr5.3:75240418-75240437 MS.gene63793:intron 40.0%
TCTTGTGAACCATGAACAAC+AGG - chr5.3:75240871-75240890 None:intergenic 40.0%
TCTTTGCTTGGATCTGTCTA+TGG + chr5.3:75242855-75242874 MS.gene63793:CDS 40.0%
TGGAACTGATGTGTTGAAGA+TGG + chr5.3:75240962-75240981 MS.gene63793:intron 40.0%
TTAAGACAGCAACTTCAGCT+AGG + chr5.3:75243096-75243115 MS.gene63793:CDS 40.0%
TTCCCAGGAACATTATTTCC+AGG + chr5.3:75240188-75240207 MS.gene63793:intron 40.0%
TTCCTCCTCTTCATGTTTAC+TGG - chr5.3:75244724-75244743 None:intergenic 40.0%
TTCGCAGCCATGATAAAAAG+TGG + chr5.3:75244429-75244448 MS.gene63793:CDS 40.0%
TTCTGACCTACCAAATGACA+TGG + chr5.3:75243975-75243994 MS.gene63793:CDS 40.0%
! ACCTCGTGAATAAGGCATTA+AGG + chr5.3:75240616-75240635 MS.gene63793:intron 40.0%
! ACCTTAATGCCTTATTCACG+AGG - chr5.3:75240620-75240639 None:intergenic 40.0%
! AGTTTGAGATTGGCTGTCTT+TGG - chr5.3:75244064-75244083 None:intergenic 40.0%
! CATTTTCTTGCTCATGCGTT+TGG + chr5.3:75240220-75240239 MS.gene63793:intron 40.0%
! CCTATTCTTTGGGTTCAGTT+TGG + chr5.3:75241512-75241531 MS.gene63793:intron 40.0%
! CTAAGGGTGTGTTTGTTTCA+AGG - chr5.3:75240547-75240566 None:intergenic 40.0%
! CTTTCTGGTACTGGAAAGTT+GGG - chr5.3:75242066-75242085 None:intergenic 40.0%
! GACTGATTCCGCTTTATAAC+AGG - chr5.3:75243065-75243084 None:intergenic 40.0%
! GTTAGTGCTACTACTGTTGT+AGG + chr5.3:75241857-75241876 MS.gene63793:intron 40.0%
! GTTTGAGATTGGCTGTCTTT+GGG - chr5.3:75244063-75244082 None:intergenic 40.0%
! TCATCCCATTTTCTCACAAG+AGG - chr5.3:75242375-75242394 None:intergenic 40.0%
! TGAAGTAAGCTTTCTGGTAC+TGG - chr5.3:75242075-75242094 None:intergenic 40.0%
!! ATTTTAAAGAGGGTCTTGCC+AGG - chr5.3:75242504-75242523 None:intergenic 40.0%
!! CAGCTACTAGGGGTATTAAA+AGG + chr5.3:75244127-75244146 MS.gene63793:CDS 40.0%
!! CGAGATAACGTTGATGATCA+AGG - chr5.3:75239567-75239586 None:intergenic 40.0%
!! CTTGGCAGTTCGCTTTTAAA+TGG - chr5.3:75244462-75244481 None:intergenic 40.0%
!! TGGTAGTGGGATCTTATAGT+AGG + chr5.3:75240328-75240347 MS.gene63793:intron 40.0%
!!! CACTTTTTCTGCAATAGCCT+TGG - chr5.3:75244316-75244335 None:intergenic 40.0%
AAGTCACAAGTAAGCGAGGT+TGG + chr5.3:75245290-75245309 MS.gene63793:CDS 45.0%
AATTCCCACCATCACTTCCA+AGG - chr5.3:75244200-75244219 None:intergenic 45.0%
ACAAGTAGGCCTGTTGTTCA+TGG + chr5.3:75240859-75240878 MS.gene63793:intron 45.0%
ACATCGCAATCTGAATGCAG+AGG + chr5.3:75244269-75244288 MS.gene63793:CDS 45.0%
ACATGAAGAGGAGGAAGAAG+AGG + chr5.3:75244728-75244747 MS.gene63793:CDS 45.0%
ACCATTAGACCCTGAATCTG+GGG - chr5.3:75243138-75243157 None:intergenic 45.0%
ACCTACCAAATGACATGGAC+CGG + chr5.3:75243980-75243999 MS.gene63793:CDS 45.0%
AGAATACTTGTCGTTGGAGG+AGG - chr5.3:75244907-75244926 None:intergenic 45.0%
AGACAAGTCACAAGTAAGCG+AGG + chr5.3:75245286-75245305 MS.gene63793:CDS 45.0%
AGTCACAAGTAAGCGAGGTT+GGG + chr5.3:75245291-75245310 MS.gene63793:CDS 45.0%
AGTTACTTCAGGTGACTGAG+AGG - chr5.3:75245366-75245385 None:intergenic 45.0%
ATCACTGTCCTTTGTCTCAG+TGG - chr5.3:75242025-75242044 None:intergenic 45.0%
ATCTTCAGATGCAGCCAAGA+AGG + chr5.3:75242995-75243014 MS.gene63793:CDS 45.0%
ATTCTTCAGGCAGCTACTAG+GGG + chr5.3:75244117-75244136 MS.gene63793:CDS 45.0%
ATTTGAACCGCAACTTCGCA+AGG - chr5.3:75241173-75241192 None:intergenic 45.0%
CAAGAATAGAAGTCAGGAGC+TGG + chr5.3:75242812-75242831 MS.gene63793:CDS 45.0%
CAATCCAAACAGGACCTTAG+TGG + chr5.3:75240061-75240080 MS.gene63793:intron 45.0%
CACCATTAGACCCTGAATCT+GGG - chr5.3:75243139-75243158 None:intergenic 45.0%
CACTAAGGTCCTGTTTGGAT+TGG - chr5.3:75240063-75240082 None:intergenic 45.0%
CCAACTAAAGCACATAACGC+AGG - chr5.3:75240660-75240679 None:intergenic 45.0%
CCTGCGTTATGTGCTTTAGT+TGG + chr5.3:75240657-75240676 MS.gene63793:intron 45.0%
CTATTCTTCAGGCAGCTACT+AGG + chr5.3:75244115-75244134 MS.gene63793:CDS 45.0%
CTTGAGAGAAACGCACATGT+GGG + chr5.3:75242921-75242940 MS.gene63793:CDS 45.0%
CTTGCTGGTAAAGAAAGGGA+AGG + chr5.3:75244543-75244562 MS.gene63793:CDS 45.0%
GAAGATGATGATCAGGCATC+AGG - chr5.3:75242716-75242735 None:intergenic 45.0%
GACCCCTGAGTTTCAATTGT+AGG + chr5.3:75241209-75241228 MS.gene63793:intron 45.0%
GATGTTCGTCATCTTCTCTC+CGG + chr5.3:75239478-75239497 MS.gene63793:CDS 45.0%
GCCATGATAAAAAGTGGAGC+TGG + chr5.3:75244435-75244454 MS.gene63793:CDS 45.0%
GGAAATGAAGAGGATGAGGA+TGG + chr5.3:75242876-75242895 MS.gene63793:CDS 45.0%
GGCTCAACAGATAAAGCTCT+TGG - chr5.3:75244480-75244499 None:intergenic 45.0%
GGTAGGTCAGAACTCATAGA+CGG - chr5.3:75243967-75243986 None:intergenic 45.0%
GTCGATCTTCACACAGAAGT+CGG + chr5.3:75244829-75244848 MS.gene63793:CDS 45.0%
GTTACTTCAGGTGACTGAGA+GGG - chr5.3:75245365-75245384 None:intergenic 45.0%
TACGCGAATGTCTATGCTCA+TGG - chr5.3:75245067-75245086 None:intergenic 45.0%
TATTCCTACGCTAACAGGGT+GGG - chr5.3:75240385-75240404 None:intergenic 45.0%
TCAGATGGAGGTTCAACAAC+AGG - chr5.3:75243209-75243228 None:intergenic 45.0%
TCAGGTGCAGTGAATTCATC+AGG + chr5.3:75241958-75241977 MS.gene63793:CDS 45.0%
TCGATCTTCACACAGAAGTC+GGG + chr5.3:75244830-75244849 MS.gene63793:CDS 45.0%
TCTTTCCGGTCCATGTCATT+TGG - chr5.3:75243988-75244007 None:intergenic 45.0%
TGAGTCTGTTCTTGCTGAAC+AGG + chr5.3:75243286-75243305 MS.gene63793:CDS 45.0%
TGATGTAGCTTCTCGTTTGG+AGG - chr5.3:75242597-75242616 None:intergenic 45.0%
TTAGAGATCTGAATCGGCGA+TGG - chr5.3:75241268-75241287 None:intergenic 45.0%
TTATTCCTACGCTAACAGGG+TGG - chr5.3:75240386-75240405 None:intergenic 45.0%
TTCCAATCAACGAGAGCTTC+CGG - chr5.3:75239436-75239455 None:intergenic 45.0%
TTCCTGGGAACAGCATTACA+AGG - chr5.3:75240178-75240197 None:intergenic 45.0%
TTCCTTGTAATGCTGTTCCC+AGG + chr5.3:75240173-75240192 MS.gene63793:intron 45.0%
! AGAGCGGTGTTTTTCATCAG+AGG - chr5.3:75245009-75245028 None:intergenic 45.0%
! AGTAAGGCGTCAAGTGGTAA+TGG + chr5.3:75244168-75244187 MS.gene63793:CDS 45.0%
! CGGTTAAACAGAAGAGTGTG+TGG - chr5.3:75241144-75241163 None:intergenic 45.0%
! CTGATGATGAGCATAGTCAC+CGG + chr5.3:75245186-75245205 MS.gene63793:CDS 45.0%
! CTGCTACTTCTGCATCATCA+GGG + chr5.3:75242955-75242974 MS.gene63793:CDS 45.0%
! GCTTTCTGGTACTGGAAAGT+TGG - chr5.3:75242067-75242086 None:intergenic 45.0%
! TGCTACTTCTGCATCATCAG+GGG + chr5.3:75242956-75242975 MS.gene63793:CDS 45.0%
! TTGGCTGCTGGCTATTAAGT+TGG + chr5.3:75241641-75241660 MS.gene63793:intron 45.0%
!! AAGGACAGTGATACTGACTC+TGG + chr5.3:75242033-75242052 MS.gene63793:CDS 45.0%
!! GGAAAAAAGGTGCCTGTGAA+TGG - chr5.3:75242288-75242307 None:intergenic 45.0%
!!! CCCAGCTCCACTTTTTATCA+TGG - chr5.3:75244439-75244458 None:intergenic 45.0%
!!! AATACAATAATTATTTTATT+TGG + chr5.3:75243783-75243802 MS.gene63793:intron 5.0%
!!! ATACAATAATTATTTTATTT+GGG + chr5.3:75243784-75243803 MS.gene63793:intron 5.0%
AAAGTGGCTATTGCAGCAGC+AGG + chr5.3:75244330-75244349 MS.gene63793:CDS 50.0%
AACAGGATCGTGCTCATGGA+AGG + chr5.3:75243303-75243322 MS.gene63793:CDS 50.0%
AACCGATGCAGGCTCAACTT+TGG + chr5.3:75242788-75242807 MS.gene63793:CDS 50.0%
AGACCCTGCAGTTGAGATGA+CGG - chr5.3:75244243-75244262 None:intergenic 50.0%
AGCTGCCTGAAGAATAGCTG+CGG - chr5.3:75244112-75244131 None:intergenic 50.0%
AGTCAGGAGCTGGATCAAAC+AGG + chr5.3:75242822-75242841 MS.gene63793:CDS 50.0%
ATGCAGACAGGGACAGAAAC+AGG + chr5.3:75244859-75244878 MS.gene63793:CDS 50.0%
ATTGCAGCGGATGATGAGTG+CGG - chr5.3:75239528-75239547 None:intergenic 50.0%
CAGGTCTCATGCTGAAAGAG+AGG + chr5.3:75245232-75245251 MS.gene63793:CDS 50.0%
CCACATGTGCGTTTCTCTCA+AGG - chr5.3:75242923-75242942 None:intergenic 50.0%
CCTTGAGAGAAACGCACATG+TGG + chr5.3:75242920-75242939 MS.gene63793:CDS 50.0%
GAACCTGAAAGTCCAGAGCT+CGG - chr5.3:75244504-75244523 None:intergenic 50.0%
GACTCAAGGTAGCCATTCAC+AGG + chr5.3:75242273-75242292 MS.gene63793:intron 50.0%
GATTCCACCTTGCGAAGTTG+CGG + chr5.3:75241163-75241182 MS.gene63793:intron 50.0%
GCAACTTCGCAAGGTGGAAT+CGG - chr5.3:75241164-75241183 None:intergenic 50.0%
GCACCATTAGACCCTGAATC+TGG - chr5.3:75243140-75243159 None:intergenic 50.0%
GCTTCAACGGTAGATTGCAG+CGG - chr5.3:75239541-75239560 None:intergenic 50.0%
GGCATCAGGAACCCAAATGT+TGG - chr5.3:75242702-75242721 None:intergenic 50.0%
GTCCAAAGTTGAGCCTGCAT+CGG - chr5.3:75242793-75242812 None:intergenic 50.0%
GTGGGAATTTGTCCAGCTCT+CGG + chr5.3:75244211-75244230 MS.gene63793:CDS 50.0%
TAGCGTGTCCACTGAGACAA+AGG + chr5.3:75242014-75242033 MS.gene63793:CDS 50.0%
TCAGATGCAGCCAAGAAGGA+TGG + chr5.3:75242999-75243018 MS.gene63793:CDS 50.0%
TGAAAGAGAGGCAGAGTTGG+AGG + chr5.3:75245244-75245263 MS.gene63793:CDS 50.0%
TGCTGAAAGAGAGGCAGAGT+TGG + chr5.3:75245241-75245260 MS.gene63793:CDS 50.0%
TGCTTCTGTTCCAGTTGCCA+AGG + chr5.3:75244296-75244315 MS.gene63793:CDS 50.0%
TTAAAGAGGGTCTTGCCAGG+CGG - chr5.3:75242501-75242520 None:intergenic 50.0%
TTCACACAGAAGTCGGGACA+GGG + chr5.3:75244836-75244855 MS.gene63793:CDS 50.0%
TTGCCGTCATCTCAACTGCA+GGG + chr5.3:75244237-75244256 MS.gene63793:CDS 50.0%
TTTGCCGTCATCTCAACTGC+AGG + chr5.3:75244236-75244255 MS.gene63793:CDS 50.0%
! GATTGGCTGTCTTTGGGAGT+TGG - chr5.3:75244057-75244076 None:intergenic 50.0%
! GCTGCTACTTCTGCATCATC+AGG + chr5.3:75242954-75242973 MS.gene63793:CDS 50.0%
! GGAGGTGCATTGTCTTTGCT+TGG + chr5.3:75242843-75242862 MS.gene63793:CDS 50.0%
! TCCGGTCCATGTCATTTGGT+AGG - chr5.3:75243984-75244003 None:intergenic 50.0%
! TCTGCAATAGCCTTGGCAAC+TGG - chr5.3:75244309-75244328 None:intergenic 50.0%
!!! TTCGGTGCAATTTTGGCTGC+TGG + chr5.3:75241629-75241648 MS.gene63793:intron 50.0%
AAGAGAGGCAGAGTTGGAGG+AGG + chr5.3:75245247-75245266 MS.gene63793:CDS 55.0%
ACAAGTAAGCGAGGTTGGGC+GGG + chr5.3:75245295-75245314 MS.gene63793:CDS 55.0%
ACAGGAGTTGCCCCAGATTC+AGG + chr5.3:75243125-75243144 MS.gene63793:CDS 55.0%
AGAGAGGCAGAGTTGGAGGA+GGG + chr5.3:75245248-75245267 MS.gene63793:CDS 55.0%
AGAGGAGGAAGAAGAGGACG+AGG + chr5.3:75244734-75244753 MS.gene63793:CDS 55.0%
AGCAGCCGCAGCTATTCTTC+AGG + chr5.3:75244104-75244123 MS.gene63793:CDS 55.0%
CACAAGTAAGCGAGGTTGGG+CGG + chr5.3:75245294-75245313 MS.gene63793:CDS 55.0%
CACCGGAAGCTCTCGTTGAT+TGG + chr5.3:75239431-75239450 MS.gene63793:CDS 55.0%
CACGATGACGTCGAGAAGAG+CGG - chr5.3:75245025-75245044 None:intergenic 55.0%
CAGACAGGGACAGAAACAGG+CGG + chr5.3:75244862-75244881 MS.gene63793:CDS 55.0%
CAGGAGCTGGATCAAACAGG+AGG + chr5.3:75242825-75242844 MS.gene63793:CDS 55.0%
CAGGAGTTGCCCCAGATTCA+GGG + chr5.3:75243126-75243145 MS.gene63793:CDS 55.0%
CAGGCCTTGGAAGTGATGGT+GGG + chr5.3:75244193-75244212 MS.gene63793:CDS 55.0%
CCATCCTAATCCCACCTGCA+CGG - chr5.3:75242332-75242351 None:intergenic 55.0%
CTCGTTTGTAGGCCTCGTCA+TGG - chr5.3:75241556-75241575 None:intergenic 55.0%
CTTCACACAGAAGTCGGGAC+AGG + chr5.3:75244835-75244854 MS.gene63793:CDS 55.0%
CTTCTCGACGTCATCGTGGA+GGG + chr5.3:75245027-75245046 MS.gene63793:CDS 55.0%
GAACTCATAGACGGATCCGC+TGG - chr5.3:75243958-75243977 None:intergenic 55.0%
GATGATGAGTGCGGCGTTTG+AGG - chr5.3:75239519-75239538 None:intergenic 55.0%
GATTCCCACCCTGTTAGCGT+AGG + chr5.3:75240378-75240397 MS.gene63793:intron 55.0%
GCCCCAGATTCAGGGTCTAA+TGG + chr5.3:75243134-75243153 MS.gene63793:CDS 55.0%
GCTGAACAGGATCGTGCTCA+TGG + chr5.3:75243299-75243318 MS.gene63793:CDS 55.0%
GTAGCTTCTCGTTTGGAGGC+TGG - chr5.3:75242593-75242612 None:intergenic 55.0%
TAGGCATGACAGCTCCTCTG+AGG + chr5.3:75244938-75244957 MS.gene63793:CDS 55.0%
TATTGCAGCAGCAGGTGAGG+CGG + chr5.3:75244338-75244357 MS.gene63793:CDS 55.0%
TCTTCTCGACGTCATCGTGG+AGG + chr5.3:75245026-75245045 MS.gene63793:CDS 55.0%
TGAACCGCAACTTCGCAAGG+TGG - chr5.3:75241170-75241189 None:intergenic 55.0%
TTCATGAAAAGGGGCCGTGC+AGG + chr5.3:75242315-75242334 MS.gene63793:intron 55.0%
! CATGACAGCTCCTCTGAGGA+GGG + chr5.3:75244942-75244961 MS.gene63793:CDS 55.0%
! CGTTTGAGGCGAGGAGGAAT+TGG - chr5.3:75239505-75239524 None:intergenic 55.0%
!! AGGGTGAGCATCGACACTTG+AGG + chr5.3:75244961-75244980 MS.gene63793:CDS 55.0%
!! AGTGGTAATGGTCCAGGCCT+TGG + chr5.3:75244180-75244199 MS.gene63793:CDS 55.0%
!! GCGTCAAGTGGTAATGGTCC+AGG + chr5.3:75244174-75244193 MS.gene63793:CDS 55.0%
AGAGGCAGAGTTGGAGGAGG+GGG + chr5.3:75245250-75245269 MS.gene63793:CDS 60.0%
AGGGGTCTCGCTGTACGACT+CGG - chr5.3:75241196-75241215 None:intergenic 60.0%
ATGAAAAGGGGCCGTGCAGG+TGG + chr5.3:75242318-75242337 MS.gene63793:intron 60.0%
CCACCATCACTTCCAAGGCC+TGG - chr5.3:75244195-75244214 None:intergenic 60.0%
CCAGGCCTTGGAAGTGATGG+TGG + chr5.3:75244192-75244211 MS.gene63793:CDS 60.0%
CCGTGCAGGTGGGATTAGGA+TGG + chr5.3:75242329-75242348 MS.gene63793:intron 60.0%
CCTGAAAGTCCAGAGCTCGG+TGG - chr5.3:75244501-75244520 None:intergenic 60.0%
CGCTCTTCTCGACGTCATCG+TGG + chr5.3:75245023-75245042 MS.gene63793:CDS 60.0%
CGTCGAACAGCATCGCGTGA+CGG - chr5.3:75239384-75239403 None:intergenic 60.0%
GAGAGGCAGAGTTGGAGGAG+GGG + chr5.3:75245249-75245268 MS.gene63793:CDS 60.0%
GAGGCGAGGAGGAATTGGAC+CGG - chr5.3:75239500-75239519 None:intergenic 60.0%
GATCCGCTGGAGTGTGCTTC+TGG - chr5.3:75243945-75243964 None:intergenic 60.0%
GCGATGCTGTTCGACGACGA+CGG + chr5.3:75239388-75239407 MS.gene63793:CDS 60.0%
GGCTATTGCAGCAGCAGGTG+AGG + chr5.3:75244335-75244354 MS.gene63793:CDS 60.0%
GGTCCAGGCCTTGGAAGTGA+TGG + chr5.3:75244189-75244208 MS.gene63793:CDS 60.0%
TCGATGCTCACCCTCCTCAG+AGG - chr5.3:75244955-75244974 None:intergenic 60.0%
TCGGGACAGGGATGCAGACA+GGG + chr5.3:75244848-75244867 MS.gene63793:CDS 60.0%
TCTGTTGAGCCACCGAGCTC+TGG + chr5.3:75244489-75244508 MS.gene63793:CDS 60.0%
TGAAAAGGGGCCGTGCAGGT+GGG + chr5.3:75242319-75242338 MS.gene63793:intron 60.0%
TGACGGCAAACTCCGAGAGC+TGG - chr5.3:75244226-75244245 None:intergenic 60.0%
! CTGCCAGAAGCACACTCCAG+CGG + chr5.3:75243939-75243958 MS.gene63793:CDS 60.0%
! GCATGACAGCTCCTCTGAGG+AGG + chr5.3:75244941-75244960 MS.gene63793:CDS 60.0%
!! CCACCGAGCTCTGGACTTTC+AGG + chr5.3:75244498-75244517 MS.gene63793:CDS 60.0%
GCTGTTCGACGACGACGGCA+TGG + chr5.3:75239393-75239412 MS.gene63793:CDS 65.0%
GGCGGCGTTCGTGAACTCAC+CGG + chr5.3:75239414-75239433 MS.gene63793:CDS 65.0%
GTCGGGACAGGGATGCAGAC+AGG + chr5.3:75244847-75244866 MS.gene63793:CDS 65.0%
GTTCGACGACGACGGCATGG+CGG + chr5.3:75239396-75239415 MS.gene63793:CDS 65.0%
! TGAGTGCGGCGTTTGAGGCG+AGG - chr5.3:75239514-75239533 None:intergenic 65.0%
GGGGCCGTGCAGGTGGGATT+AGG + chr5.3:75242325-75242344 MS.gene63793:intron 70.0%
! GTGCGGCGTTTGAGGCGAGG+AGG - chr5.3:75239511-75239530 None:intergenic 70.0%
!! CGAGGTTGGGCGGGCTAGCA+GGG + chr5.3:75245304-75245323 MS.gene63793:CDS 70.0%
!! GCGAGGTTGGGCGGGCTAGC+AGG + chr5.3:75245303-75245322 MS.gene63793:CDS 75.0%
!! GGTTGGGCGGGCTAGCAGGG+AGG + chr5.3:75245307-75245326 MS.gene63793:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 75239361 75245442 75239361 ID=MS.gene63793
chr5.3 mRNA 75239361 75245442 75239361 ID=MS.gene63793.t1;Parent=MS.gene63793
chr5.3 exon 75239361 75239631 75239361 ID=MS.gene63793.t1.exon1;Parent=MS.gene63793.t1
chr5.3 CDS 75239361 75239631 75239361 ID=cds.MS.gene63793.t1;Parent=MS.gene63793.t1
chr5.3 exon 75241950 75242101 75241950 ID=MS.gene63793.t1.exon2;Parent=MS.gene63793.t1
chr5.3 CDS 75241950 75242101 75241950 ID=cds.MS.gene63793.t1;Parent=MS.gene63793.t1
chr5.3 exon 75242594 75243394 75242594 ID=MS.gene63793.t1.exon3;Parent=MS.gene63793.t1
chr5.3 CDS 75242594 75243394 75242594 ID=cds.MS.gene63793.t1;Parent=MS.gene63793.t1
chr5.3 exon 75243919 75245442 75243919 ID=MS.gene63793.t1.exon4;Parent=MS.gene63793.t1
chr5.3 CDS 75243919 75245442 75243919 ID=cds.MS.gene63793.t1;Parent=MS.gene63793.t1
Gene Sequence

>MS.gene63793

ATGGATCTCGAAGTCGTTGGCCGTCACGCGATGCTGTTCGACGACGACGGCATGGCGGCGTTCGTGAACTCACCGGAAGCTCTCGTTGATTGGAATTCTCTCTCAATCGATCGTTACGATGTTCGTCATCTTCTCTCCGGTCCAATTCCTCCTCGCCTCAAACGCCGCACTCATCATCCGCTGCAATCTACCGTTGAAGCTGACCTTGATCATCAACGTTATCTCGATCTTCCTTCTTCTTCTCCGATTCATGAAGAACAACCACAAGAAGGTAACCTCCTAATTCATTCATTCTTCTAGTATTTTTATTCGTTGTTTTCTATATCGTTTATTCGATTTTGGATTCTGTTATGGTTGATTTTCGTGAAATTAGGTTTCGTTGTTTTAAGTTGAGGTTAGATAGGAAGCTTCATATATGAAACCGTAAAATTTTGTTAGAATTGAAGGTTAATTAGGCCTCGTTTGGATAAACAGTTAATTTGCAGCTTATAGTACAAGTGCTTTTAATGATAAGCGCTTATTTATAAACTATTTATAGAGCAAAAGATGAAATGAAGATAGTTTGTTTCCATATAAGTTATAGCTATCTCCTGGAGAACTTCTGAAAATAAGGCGAAAACAACTTATGAACAATGTGATAAGCTGTTTTTGTAGGTTCTCGCAAACAGAAACTTATGCCAGTGGATAAGTTCAAATAAGCCAATCCAAACAGGACCTTAGTGGATTAAATGTAGATAGTCTAATTAATAAGGGTAGAGGAAGTTGTAGGAAAATTTAGGGTGTGTTTGTTTCAAGGTATAAAAATTACTACATTCCTTGTAATGCTGTTCCCAGGAACATTATTTCCAGGAATGACTTTCATTTTCTTGCTCATGCGTTTGGTTAAATTTTAGATTTCATTGGAATATTTTTAAAATTTATTTAAAGTAAAACAAATTTTAAAAATAAAAATGCAAATAAATATGAGTGGTAGTGGGATCTTATAGTAGGTTGAGTTTTATTCTCATGGAAATGTTCGATTCCCACCCTGTTAGCGTAGGAATAAAAAGTATAAAAATCATGCGTGGTTAAAATTCCTGGGAACAAAAAAATTAAAAATTTCTGGAAACAAATTTTCAAAACATGAAACAAACATGGGGATGTTACATTCCTTATCTCATATTCCCGAGAATAACATTATAAACCTTGAAACAAACACACCCTTAGGAAACACTTTTAGAAGGTTTTGCTGAAATTTTGGTTTTTGATAGCATTTACCTCGTGAATAAGGCATTAAGGTTTGGTTGTTATTGTCGTCCTGCGTTATGTGCTTTAGTTGGAATAGATAAATGTTCTGTTATTCGATGAAAGGAAGCATGCCCATATATGTCAATTAAATTTAGATTTTGGATTTGAGATTTATCCTCTTTATCATTATACTGATGGCTTTTATATGTTTGGAACATATTGTTTTAATGAATCATCATGAGTGATTCTCTAATACTTGTTTTCAAAACAAACAAGTAGGCCTGTTGTTCATGGTTCACAAGAAACTGAGCCAAACTATGAACTGCACTTGAACCAAACTCAAAATAACCAAAATTTTGATAAAGTTTATTGAATGGAACTGATGTGTTGAAGATGGTTTGGTAACCACACCCTTATAACAGTTCTGTTTGGTTACTGAATCGCTGCTGTATAACATGTTGCAACACATTAAAATGCAAGCTTCAGGGGTTCCCTGTGTGTGTTGAATAATTTAGTTGGGTTTTGGTACCTTTTCCATATACAATTTCAGGTGCCACACACTCTTCTGTTTAACCGATTCCACCTTGCGAAGTTGCGGTTCAAATCCGAGTCGTACAGCGAGACCCCTGAGTTTCAATTGTAGGATAGAGAGAGCAATCACTTTCTCGCGTATTTCTCCATCGCCGATTCAGATCTCTAACGAGTCATGACTCAGTGATTTAAGGTTCAGTTTCGTAGAGAGATTTTAGAAGGAAGTAAAGCTGGAAAAAATAAAGAAGCATCTTGCATTTGCAATTTCATTTAAGAGTACAGATTCTGGAAAAAAAATCAGTGCTTAAATTAAAGTTCAGCAGAGTCCTGAACCTCAAAATCAGTTTAGTTTGGCTCTAGTAAATTTAAAATATTTCAGTTCAGTTCATCGAACCTATTCTTTGGGTTCAGTTTGGTTTTTCATACAAACTGAACCATGACGAGGCCTACAAACGAGCATGAACATGTCTTTTCAATTGGTTCTCATCATTTGGACTAATTGATATATCTTTCGGTGCAATTTTGGCTGCTGGCTATTAAGTTGGATTTTTTTTTTCTTTTCACGGTGGTTTTTTGGACAACTTCCGCCCAAGACAGTGTTTAGTTTTTTTTTTTTTTTTTTTGTACAACAACAATCTCTACATTTGCAGGATGCAATCTAATATGCTACGGTTCATGTGTCAGACTACAAGTAAGGATGTTTTCAACTGGCTTCCATTTTGTTTTAGTTTATTTGGTGTTAGTGCTACTACTGTTGTAGGTGTATGATATTGTTGCGGTTAAGAATTATATGTGATTCTGATGAAATGTCACCTTTCCGTGTTTGTTTAGATAATGATTCAGGTGCAGTGAATTCATCAGGCTATCGTGCTGTTGCATTTTCATATGAAAATTCTAGCGTGTCCACTGAGACAAAGGACAGTGATACTGACTCTGGTTTTCGTCCCAACTTTCCAGTACCAGAAAGCTTACTTCATAATCTGGTGAGTAACATCTTTCTTAAAATATAATCCGATCATGTGATTTTCATGTTTTAATTGACCCTCTCATTGTTTAACCAATGTGACTAGGTGATAATTGTCTAGGGTACATATGTTATTCTAAGGCTTATGATGTCTAAGTTTCAGATGCTTGGAGCTTAAAGAAGTTCTTGTGACTCAAGGTAGCCATTCACAGGCACCTTTTTTCCTTTTGATTTCATGAAAAGGGGCCGTGCAGGTGGGATTAGGATGGTAGAAATTGTTGATTCTATACCTCTTGTGAGAAAATGGGATGAAACATTTCTACATAAAGCTCTAGTTCTTGATCTTTATGATTATTCAAGTATATATGAGGTTGTCTTGTGTTTGTTTAATAAGATCTTCATGTATTCATATATACCGCCTGGCAAGACCCTCTTTAAAATTAGTGTTATGCTAATTTGAATTAAAATTCACATTTATTGACAAAAAAACCTTTTTGTTTTTCTTTTCCAGCCTCCAAACGAGAAGCTACATCAGATTATTTCAAAGACTGCAATGTTTGTCAGCAAACATGGAAGCCAATCAGAAATTATTCTGAGGGTGAAACAAGGAGATAATCCAACATTTGGGTTCCTGATGCCTGATCATCATCTTCATCCGTATTTTAGGTTTCTTGTTGATCATCAAGAACTTCTGAAAGATGACAAAACCGATGCAGGCTCAACTTTGGACAAGAATAGAAGTCAGGAGCTGGATCAAACAGGAGGTGCATTGTCTTTGCTTGGATCTGTCTATGGAAATGAAGAGGATGAGGATGGTCCAACTGAAAATACTAGTGACCTTGAGAGAAACGCACATGTGGGAGCTGTTGATGCTGCTACTTCTGCATCATCAGGGGTAGAGCAAGCACAATCATCTTCAGATGCAGCCAAGAAGGATGGAAGCATTTCTAAAAACCAAATACCTTTGAAAGAAAAAGTTCCTGTTATAAAGCGGAATCAGTCTATCAGTATTGTTAAGACAGCAACTTCAGCTAGGACAAAAACAGGAGTTGCCCCAGATTCAGGGTCTAATGGTGCAAATAAATCACAGACTTCTGTGCCCAGTACATCTAAGATTGAACTACCTGTTGTTGAACCTCCATCTGACTTAAAGATAGTTATTGATAAAATAGTTGAGTTCATCTTAAAAAATGGAAGGCAATTTGAGTCTGTTCTTGCTGAACAGGATCGTGCTCATGGAAGGTTCCCATTTCTTCTGCCTTCTAATCGATATCATACTTACTATCTGAAAGTTCTTCAAACTGCTGAAGAGGTGTGTTTCTCATAATCATTAAATTTTACCCTTGCAATTCATCTGTTTGTGTGGTTCAAATTATGCGAAGTGAGAAATTAGGTGCATTTTTACTACGATGTAGAACATGATTCAAGGTCACTATGATTGATGCTTCGCACGCTACCCATTCCCTTTTATTATGTTGGTTATTCTCATATGTCATTATTTCATATTATGTGTTAATTAATCTGTGGATGAAATGCATGCTTCTATATAATTCATTCAATACTTCACAAATCACAGTAAATAAAATATTGTCTGGATACGTAGTACATAGTTTTCACAAATTATGAATATGAATATTCAAAGCAATATTGGTTATTTTTATTCATCTTTGCTTTATAAAATGTTCCTTCTGGCTGAATCAAATACAATAATTATTTTATTTGGGTTCAAGATGCTTTTTGTGCAATTAGTGCATCTTAAGAATTTCGTGTAATTTGATTAATTTCAAGGTTTGTTAAATTTGATTTTGATTTAATGATATTTTCAATTGTTTACAGTCTAAGTTACAAGGCAAGGGCTGCCAGAAGCACACTCCAGCGGATCCGTCTATGAGTTCTGACCTACCAAATGACATGGACCGGAAAGAGAAATTCAAGATGACTATTGGCAATTTAAGGAAGGATGGTCAAGATCCAACTCCCAAAGACAGCCAATCTCAAACTACAGTTAGCATTCATGCGGCAGCAGCCGCAGCTATTCTTCAGGCAGCTACTAGGGGTATTAAAAGGCCTAATTTAGAAATTTTTAGTAAGGCGTCAAGTGGTAATGGTCCAGGCCTTGGAAGTGATGGTGGGAATTTGTCCAGCTCTCGGAGTTTGCCGTCATCTCAACTGCAGGGTCTTGTTCTACATCGCAATCTGAATGCAGAGGCTCATGCTTCTGTTCCAGTTGCCAAGGCTATTGCAGAAAAAGTGGCTATTGCAGCAGCAGGTGAGGCGGACTCCTCTGAAGCACATATGACTAAAGAGCAAAAGCTTAAAGCAGAGAGATTGAAACGAGCAAAGATGTTCGCAGCCATGATAAAAAGTGGAGCTGGGCCATTTAAAAGCGAACTGCCAAGAGCTTTATCTGTTGAGCCACCGAGCTCTGGACTTTCAGGTTCAGATGCTGAGATTAGAAATCTTGCTGGTAAAGAAAGGGAAGGAAGTTCTGTTCCATTCAATACTGATAACTCAGATAAAAGTCACAAGTCTGAGGAAAAGCTTTCTGATGATAATTCAGATAAAAGTCACAAGTCTGAAGAAAAACTTACTGTTGATAATAATGAAAGGCGATCAAAAAGGAAGTACCGTTCAAGATCCAGTAAACATGAAGAGGAGGAAGAAGAGGACGAGGATGATGAAGAAGAAGAAGAAAATAAAGAAGATACAAGGGATCACAAAAGATCTAGAAAAAAGCATCGATCACGTCGATCTTCACACAGAAGTCGGGACAGGGATGCAGACAGGGACAGAAACAGGCGGAAGCACAAGAGAAGAGATTCCTCCTCCAACGACAAGTATTCTCATAGGGAGAGTAGGCATGACAGCTCCTCTGAGGAGGGTGAGCATCGACACTTGAGGCATCAATGTAAATATGAAAGCTCCTCTGATGAAAAACACCGCTCTTCTCGACGTCATCGTGGAGGGAGCAAGTTGTCAGACCATGAGCATAGACATTCGCGTAAACATTATAGTTCCTCTGATGATGAGCATAGACATTCGCGTAAACGTTATAGTTCATCTGATGATGAGCATAGACATTCGCGTAAACATTATAGTTCATCTGATGATGAGCATAGTCACCGGAGCAGAAAGACAAAGCATAAGAGCAGGTCTCATGCTGAAAGAGAGGCAGAGTTGGAGGAGGGGGAAATAGTGAAATCAGACAAGTCACAAGTAAGCGAGGTTGGGCGGGCTAGCAGGGAGGCTTCTGCTGAATTATTCAAGTCTACAAGGGCACCCTCTCAGTCACCTGAAGTAACTAATGTTTCTGATGAGCTTAGAGCCAAAATTAGAGCCATGTTGATGGAAAATTTGTAA
Protein sequence

>MS.gene63793.t1

MDLEVVGRHAMLFDDDGMAAFVNSPEALVDWNSLSIDRYDVRHLLSGPIPPRLKRRTHHPLQSTVEADLDHQRYLDLPSSSPIHEEQPQEDNDSGAVNSSGYRAVAFSYENSSVSTETKDSDTDSGFRPNFPVPESLLHNLPPNEKLHQIISKTAMFVSKHGSQSEIILRVKQGDNPTFGFLMPDHHLHPYFRFLVDHQELLKDDKTDAGSTLDKNRSQELDQTGGALSLLGSVYGNEEDEDGPTENTSDLERNAHVGAVDAATSASSGVEQAQSSSDAAKKDGSISKNQIPLKEKVPVIKRNQSISIVKTATSARTKTGVAPDSGSNGANKSQTSVPSTSKIELPVVEPPSDLKIVIDKIVEFILKNGRQFESVLAEQDRAHGRFPFLLPSNRYHTYYLKVLQTAEESKLQGKGCQKHTPADPSMSSDLPNDMDRKEKFKMTIGNLRKDGQDPTPKDSQSQTTVSIHAAAAAAILQAATRGIKRPNLEIFSKASSGNGPGLGSDGGNLSSSRSLPSSQLQGLVLHRNLNAEAHASVPVAKAIAEKVAIAAAGEADSSEAHMTKEQKLKAERLKRAKMFAAMIKSGAGPFKSELPRALSVEPPSSGLSGSDAEIRNLAGKEREGSSVPFNTDNSDKSHKSEEKLSDDNSDKSHKSEEKLTVDNNERRSKRKYRSRSSKHEEEEEEDEDDEEEEENKEDTRDHKRSRKKHRSRRSSHRSRDRDADRDRNRRKHKRRDSSSNDKYSHRESRHDSSSEEGEHRHLRHQCKYESSSDEKHRSSRRHRGGSKLSDHEHRHSRKHYSSSDDEHRHSRKRYSSSDDEHRHSRKHYSSSDDEHSHRSRKTKHKSRSHAEREAELEEGEIVKSDKSQVSEVGRASREASAELFKSTRAPSQSPEVTNVSDELRAKIRAMLMENL