Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66736.t1 | XP_024637633.1 | 97.6 | 170 | 4 | 0 | 1 | 170 | 1 | 170 | 6.10E-87 | 330.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66736.t1 | I3SF91 | 97.6 | 170 | 4 | 0 | 1 | 170 | 1 | 170 | 4.4e-87 | 330.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene66736 | 0.811623 | 6.38E-51 | -1.69E-46 |
| MS.gene050128 | MS.gene66736 | 0.821199 | 4.58E-53 | -1.69E-46 |
| MS.gene050584 | MS.gene66736 | 0.85122 | 1.02E-60 | -1.69E-46 |
| MS.gene050585 | MS.gene66736 | 0.820694 | 5.99E-53 | -1.69E-46 |
| MS.gene050586 | MS.gene66736 | 0.808583 | 2.88E-50 | -1.69E-46 |
| MS.gene050587 | MS.gene66736 | 0.810788 | 9.68E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene66736 | 0.802988 | 4.32E-49 | -1.69E-46 |
| MS.gene051789 | MS.gene66736 | 0.876496 | 1.33E-68 | -1.69E-46 |
| MS.gene052142 | MS.gene66736 | 0.819383 | 1.20E-52 | -1.69E-46 |
| MS.gene052178 | MS.gene66736 | 0.836285 | 1.02E-56 | -1.69E-46 |
| MS.gene052967 | MS.gene66736 | 0.813288 | 2.76E-51 | -1.69E-46 |
| MS.gene053074 | MS.gene66736 | 0.84718 | 1.36E-59 | -1.69E-46 |
| MS.gene053204 | MS.gene66736 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene054010 | MS.gene66736 | 0.808911 | 2.45E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene66736 | 0.816978 | 4.18E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene66736 | 0.804304 | 2.30E-49 | -1.69E-46 |
| MS.gene054013 | MS.gene66736 | 0.80668 | 7.31E-50 | -1.69E-46 |
| MS.gene054214 | MS.gene66736 | 0.818487 | 1.91E-52 | -1.69E-46 |
| MS.gene05456 | MS.gene66736 | 0.852581 | 4.20E-61 | -1.69E-46 |
| MS.gene054596 | MS.gene66736 | 0.814928 | 1.20E-51 | -1.69E-46 |
| MS.gene054618 | MS.gene66736 | 0.83071 | 2.52E-55 | -1.69E-46 |
| MS.gene055207 | MS.gene66736 | 0.806461 | 8.14E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene66736 | 0.810963 | 8.87E-51 | -1.69E-46 |
| MS.gene056629 | MS.gene66736 | 0.822119 | 2.81E-53 | -1.69E-46 |
| MS.gene059006 | MS.gene66736 | 0.861917 | 7.32E-64 | -1.69E-46 |
| MS.gene059228 | MS.gene66736 | 0.870833 | 1.08E-66 | -1.69E-46 |
| MS.gene060005 | MS.gene66736 | 0.810046 | 1.40E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene66736 | 0.806974 | 6.34E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66736.t1 | MTR_2g086680 | 68.605 | 172 | 52 | 2 | 1 | 170 | 1 | 172 | 1.20e-84 | 246 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66736.t1 | AT5G22430 | 47.134 | 157 | 81 | 2 | 15 | 170 | 17 | 172 | 5.92e-45 | 146 |
| MS.gene66736.t1 | AT2G27385 | 45.181 | 166 | 82 | 3 | 5 | 170 | 6 | 162 | 2.97e-41 | 136 |
| MS.gene66736.t1 | AT2G27385 | 45.181 | 166 | 82 | 3 | 5 | 170 | 17 | 173 | 4.47e-41 | 136 |
| MS.gene66736.t1 | AT2G27385 | 45.181 | 166 | 82 | 3 | 5 | 170 | 17 | 173 | 4.47e-41 | 136 |
Find 27 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCTTACAATTTGTGTTT+TGG | 0.164797 | 4.3:-47219977 | None:intergenic |
| CAAGTTTCACAAGTTATTAA+AGG | 0.220047 | 4.3:+47219897 | MS.gene66736:CDS |
| AACTGTTTGGCAAAACTTCT+TGG | 0.296592 | 4.3:+47219840 | MS.gene66736:CDS |
| ATCAGCATGTGAAATTGTTC+AGG | 0.312927 | 4.3:+47218698 | MS.gene66736:CDS |
| CAAAGGAAGATCAATAGTTT+TGG | 0.318080 | 4.3:-47220018 | None:intergenic |
| TCTTCCTTTGCCTCCAGAAT+GGG | 0.330802 | 4.3:+47220031 | MS.gene66736:CDS |
| CTAGGTGCCAAACCCCATTC+TGG | 0.349471 | 4.3:-47220044 | None:intergenic |
| TGTAAGGCTGCAAAACCTAT+TGG | 0.353116 | 4.3:+47219990 | MS.gene66736:CDS |
| CTTTAATAACTTGTGAAACT+TGG | 0.355048 | 4.3:-47219896 | None:intergenic |
| AATTAAGGTATTCCAATGAT+AGG | 0.380107 | 4.3:-47220089 | None:intergenic |
| ACTCATAGCTACGATTTATC+TGG | 0.396323 | 4.3:+47218744 | MS.gene66736:CDS |
| TTTGCCTCCAGAATGGGGTT+TGG | 0.402516 | 4.3:+47220037 | MS.gene66736:CDS |
| ATCTTCCTTTGCCTCCAGAA+TGG | 0.404991 | 4.3:+47220030 | MS.gene66736:CDS |
| CTTCTGTAGTTGTCATAGCT+AGG | 0.461561 | 4.3:-47219764 | None:intergenic |
| GAACAATTTCACATGCTGAT+AGG | 0.462045 | 4.3:-47218695 | None:intergenic |
| TGAGGGAAGGTTAACCTTGA+AGG | 0.474424 | 4.3:-47219796 | None:intergenic |
| TGTTTGGCAAAACTTCTTGG+TGG | 0.491974 | 4.3:+47219843 | MS.gene66736:CDS |
| CTTCCTTTGCCTCCAGAATG+GGG | 0.503336 | 4.3:+47220032 | MS.gene66736:CDS |
| ATTCCAATGATAGGAACAAA+AGG | 0.504181 | 4.3:-47220080 | None:intergenic |
| AGAAGAAGATGGCTCCTTCA+AGG | 0.515472 | 4.3:+47219782 | MS.gene66736:CDS |
| CATGATGTCAAGAAACTAAG+AGG | 0.549180 | 4.3:-47219951 | None:intergenic |
| AAACCCCATTCTGGAGGCAA+AGG | 0.556721 | 4.3:-47220035 | None:intergenic |
| TCAGCATGTGAAATTGTTCA+GGG | 0.561309 | 4.3:+47218699 | MS.gene66736:CDS |
| AAAGGTACATAATAACTACT+AGG | 0.564274 | 4.3:-47220062 | None:intergenic |
| ATGACAACTACAGAAGAAGA+TGG | 0.604128 | 4.3:+47219771 | MS.gene66736:CDS |
| AAGGTCACAGTGAAATGTGA+AGG | 0.615631 | 4.3:+47219732 | MS.gene66736:CDS |
| GGTGCCAAACCCCATTCTGG+AGG | 0.664114 | 4.3:-47220041 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAGTTTATTTATTAATA+GGG | + | chr4.3:47218935-47218954 | MS.gene66736:intron | 10.0% |
| !! | TCAATAGTTTATTTATTAAT+AGG | + | chr4.3:47218934-47218953 | MS.gene66736:intron | 10.0% |
| !!! | AAGATAAATTTTCTATTTAT+GGG | + | chr4.3:47219170-47219189 | MS.gene66736:intron | 10.0% |
| !!! | AAAATTAGTAACTTTTACAT+TGG | + | chr4.3:47219102-47219121 | MS.gene66736:intron | 15.0% |
| !!! | AATGTAAAAGTTACTAATTT+TGG | - | chr4.3:47219103-47219122 | None:intergenic | 15.0% |
| !!! | CAAGATAAATTTTCTATTTA+TGG | + | chr4.3:47219169-47219188 | MS.gene66736:intron | 15.0% |
| !! | AATAGTAGACATATGTATTA+TGG | + | chr4.3:47218851-47218870 | MS.gene66736:intron | 20.0% |
| !! | AATCATGTATGTTTCTTTAA+AGG | - | chr4.3:47219235-47219254 | None:intergenic | 20.0% |
| !! | ATCATGTATGTTTCTTTAAA+GGG | - | chr4.3:47219234-47219253 | None:intergenic | 20.0% |
| !! | GAACATTTAATTAAACTCAA+AGG | - | chr4.3:47218799-47218818 | None:intergenic | 20.0% |
| !! | TACAAGATGCATATAATATA+TGG | - | chr4.3:47219674-47219693 | None:intergenic | 20.0% |
| !! | TTTGTTAAGAAATACACATT+TGG | + | chr4.3:47219287-47219306 | MS.gene66736:intron | 20.0% |
| !!! | TAATTTTTTAGAAAGAGTGT+GGG | + | chr4.3:47219529-47219548 | MS.gene66736:intron | 20.0% |
| !!! | TCAATGATTTTCAGATATTA+AGG | + | chr4.3:47219713-47219732 | MS.gene66736:intron | 20.0% |
| !!! | TGTGTATTTATGACTTTTAT+AGG | + | chr4.3:47219129-47219148 | MS.gene66736:intron | 20.0% |
| ! | AAGGCCTTTACAAAAAATTA+CGG | - | chr4.3:47219380-47219399 | None:intergenic | 25.0% |
| ! | CAAGTTTCACAAGTTATTAA+AGG | + | chr4.3:47219897-47219916 | MS.gene66736:CDS | 25.0% |
| ! | TTAAACTCAAAGGCAAATTA+TGG | - | chr4.3:47218789-47218808 | None:intergenic | 25.0% |
| !! | AAAGGTACATAATAACTACT+AGG | - | chr4.3:47220065-47220084 | None:intergenic | 25.0% |
| !! | CAATTTTACCTCTTAAAGAA+GGG | + | chr4.3:47219039-47219058 | MS.gene66736:intron | 25.0% |
| !! | CTTTAATAACTTGTGAAACT+TGG | - | chr4.3:47219899-47219918 | None:intergenic | 25.0% |
| !!! | ACAATAGTTTTTGTGTTGTT+TGG | - | chr4.3:47219267-47219286 | None:intergenic | 25.0% |
| !!! | CAATAGTTTTTGTGTTGTTT+GGG | - | chr4.3:47219266-47219285 | None:intergenic | 25.0% |
| !!! | CTATTTTTTAATGTCCCTAT+GGG | + | chr4.3:47219014-47219033 | MS.gene66736:intron | 25.0% |
| !!! | GTAATTTTTTAGAAAGAGTG+TGG | + | chr4.3:47219528-47219547 | MS.gene66736:intron | 25.0% |
| !!! | TAAAAAATAGGAGCTTTGTT+TGG | - | chr4.3:47219004-47219023 | None:intergenic | 25.0% |
| AAAAACTTCCATGAACTGTT+TGG | + | chr4.3:47219827-47219846 | MS.gene66736:CDS | 30.0% | |
| AGGCCTTTACAAAAAATTAC+GGG | - | chr4.3:47219379-47219398 | None:intergenic | 30.0% | |
| ATTCCAATGATAGGAACAAA+AGG | - | chr4.3:47220083-47220102 | None:intergenic | 30.0% | |
| CCATAGGGACATTAAAAAAT+AGG | - | chr4.3:47219016-47219035 | None:intergenic | 30.0% | |
| CTAAAAAATTACATGTGTCC+CGG | - | chr4.3:47219520-47219539 | None:intergenic | 30.0% | |
| TTGTTTGGAGATTAAAGCTA+GGG | - | chr4.3:47218989-47219008 | None:intergenic | 30.0% | |
| TTTATACCAGATGTCTCTTT+CGG | - | chr4.3:47218965-47218984 | None:intergenic | 30.0% | |
| TTTGTTTGGAGATTAAAGCT+AGG | - | chr4.3:47218990-47219009 | None:intergenic | 30.0% | |
| ! | AGCCTTACAATTTGTGTTTT+GGG | - | chr4.3:47219979-47219998 | None:intergenic | 30.0% |
| ! | CAAAGGAAGATCAATAGTTT+TGG | - | chr4.3:47220021-47220040 | None:intergenic | 30.0% |
| ! | GCAATTTTACCTCTTAAAGA+AGG | + | chr4.3:47219038-47219057 | MS.gene66736:intron | 30.0% |
| !! | TTTTTGGCATAAAGCTGAAT+TGG | - | chr4.3:47219870-47219889 | None:intergenic | 30.0% |
| !!! | ATAGTTTTGGATGAACCAAT+AGG | - | chr4.3:47220008-47220027 | None:intergenic | 30.0% |
| !!! | CCTATTTTTTAATGTCCCTA+TGG | + | chr4.3:47219013-47219032 | MS.gene66736:intron | 30.0% |
| !!! | TGAAACTTGGTTTTGCTTTT+TGG | - | chr4.3:47219886-47219905 | None:intergenic | 30.0% |
| AAACGTCTCAAAGTATACTC+CGG | + | chr4.3:47219498-47219517 | MS.gene66736:intron | 35.0% | |
| AACTGTTTGGCAAAACTTCT+TGG | + | chr4.3:47219840-47219859 | MS.gene66736:CDS | 35.0% | |
| ACTCATAGCTACGATTTATC+TGG | + | chr4.3:47218744-47218763 | MS.gene66736:CDS | 35.0% | |
| ATCAGCATGTGAAATTGTTC+AGG | + | chr4.3:47218698-47218717 | MS.gene66736:CDS | 35.0% | |
| ATGACAACTACAGAAGAAGA+TGG | + | chr4.3:47219771-47219790 | MS.gene66736:CDS | 35.0% | |
| ATGCTTAAACAATGCCCTAA+GGG | - | chr4.3:47219080-47219099 | None:intergenic | 35.0% | |
| CATCCACCATTTGATACATA+AGG | - | chr4.3:47219601-47219620 | None:intergenic | 35.0% | |
| CATGATGTCAAGAAACTAAG+AGG | - | chr4.3:47219954-47219973 | None:intergenic | 35.0% | |
| CCTTTACAAAAAATTACGGG+AGG | - | chr4.3:47219376-47219395 | None:intergenic | 35.0% | |
| CTTAAGGTTCCAAGAATGTT+GGG | + | chr4.3:47219571-47219590 | MS.gene66736:intron | 35.0% | |
| GAACAATTTCACATGCTGAT+AGG | - | chr4.3:47218698-47218717 | None:intergenic | 35.0% | |
| GTATACTTCTAGACACATGT+TGG | - | chr4.3:47219449-47219468 | None:intergenic | 35.0% | |
| TACCTTGGAGATTTCACTTA+TGG | + | chr4.3:47219408-47219427 | MS.gene66736:intron | 35.0% | |
| TAGCATTTCCCTTCTTTAAG+AGG | - | chr4.3:47219050-47219069 | None:intergenic | 35.0% | |
| TCAGCATGTGAAATTGTTCA+GGG | + | chr4.3:47218699-47218718 | MS.gene66736:CDS | 35.0% | |
| TTCCTTAAACAATGCCCTTA+GGG | + | chr4.3:47219193-47219212 | MS.gene66736:intron | 35.0% | |
| TTGAAGAACAATGAGAGTCA+TGG | - | chr4.3:47219697-47219716 | None:intergenic | 35.0% | |
| ! | AAGTTTTGCCAAACAGTTCA+TGG | - | chr4.3:47219838-47219857 | None:intergenic | 35.0% |
| ! | CAGCCTTACAATTTGTGTTT+TGG | - | chr4.3:47219980-47219999 | None:intergenic | 35.0% |
| ! | GAAGTTTTTGTGTTGTCTGA+GGG | - | chr4.3:47219816-47219835 | None:intergenic | 35.0% |
| ! | GCCTTACAATTTGTGTTTTG+GGG | - | chr4.3:47219978-47219997 | None:intergenic | 35.0% |
| ! | GTACCTTTTGTTCCTATCAT+TGG | + | chr4.3:47220077-47220096 | MS.gene66736:CDS | 35.0% |
| ! | TCTCCAAGGTATTATCAACA+AGG | - | chr4.3:47219399-47219418 | None:intergenic | 35.0% |
| !! | CCTTACAATTTGTGTTTTGG+GGG | - | chr4.3:47219977-47219996 | None:intergenic | 35.0% |
| !!! | AAGCTGTGTTTTTTCCCATA+TGG | + | chr4.3:47219319-47219338 | MS.gene66736:intron | 35.0% |
| !!! | AGCTGTGTTTTTTCCCATAT+GGG | + | chr4.3:47219320-47219339 | MS.gene66736:intron | 35.0% |
| !!! | CCTCCCGTAATTTTTTGTAA+AGG | + | chr4.3:47219373-47219392 | MS.gene66736:intron | 35.0% |
| AAATGCTAACAAGTGCCCTT+AGG | + | chr4.3:47219062-47219081 | MS.gene66736:intron | 40.0% | |
| AACGTCTCAAAGTATACTCC+GGG | + | chr4.3:47219499-47219518 | MS.gene66736:intron | 40.0% | |
| AAGGTCACAGTGAAATGTGA+AGG | + | chr4.3:47219732-47219751 | MS.gene66736:CDS | 40.0% | |
| AATGCTAACAAGTGCCCTTA+GGG | + | chr4.3:47219063-47219082 | MS.gene66736:intron | 40.0% | |
| ACTTCTAGACACATGTTGGT+TGG | - | chr4.3:47219445-47219464 | None:intergenic | 40.0% | |
| AGAGGTAAAATTGCTCCCAT+AGG | - | chr4.3:47219032-47219051 | None:intergenic | 40.0% | |
| CACCATTTGATACATAAGGC+CGG | - | chr4.3:47219597-47219616 | None:intergenic | 40.0% | |
| CCAACATTCTTGGAACCTTA+AGG | - | chr4.3:47219573-47219592 | None:intergenic | 40.0% | |
| CCCCCAAAACACAAATTGTA+AGG | + | chr4.3:47219974-47219993 | MS.gene66736:CDS | 40.0% | |
| CCTTAAGGTTCCAAGAATGT+TGG | + | chr4.3:47219570-47219589 | MS.gene66736:intron | 40.0% | |
| CTCCATAAGTGAAATCTCCA+AGG | - | chr4.3:47219413-47219432 | None:intergenic | 40.0% | |
| CTTCTGTAGTTGTCATAGCT+AGG | - | chr4.3:47219767-47219786 | None:intergenic | 40.0% | |
| CTTTGTCACTCAGAAGAGTT+CGG | - | chr4.3:47219351-47219370 | None:intergenic | 40.0% | |
| GAGGTAAAATTGCTCCCATA+GGG | - | chr4.3:47219031-47219050 | None:intergenic | 40.0% | |
| GATGCTTAAACAATGCCCTA+AGG | - | chr4.3:47219081-47219100 | None:intergenic | 40.0% | |
| GTTCCTTAAACAATGCCCTT+AGG | + | chr4.3:47219192-47219211 | MS.gene66736:intron | 40.0% | |
| TGTAAGGCTGCAAAACCTAT+TGG | + | chr4.3:47219990-47220009 | MS.gene66736:CDS | 40.0% | |
| TGTTTGGCAAAACTTCTTGG+TGG | + | chr4.3:47219843-47219862 | MS.gene66736:CDS | 40.0% | |
| TTTGCTAACAAGTGCCCTAA+GGG | - | chr4.3:47219210-47219229 | None:intergenic | 40.0% | |
| ! | CTTCTAGACACATGTTGGTT+GGG | - | chr4.3:47219444-47219463 | None:intergenic | 40.0% |
| ! | GGAAGTTTTTGTGTTGTCTG+AGG | - | chr4.3:47219817-47219836 | None:intergenic | 40.0% |
| ! | TTTTGCTAACAAGTGCCCTA+AGG | - | chr4.3:47219211-47219230 | None:intergenic | 40.0% |
| ! | TTTTTGTGTTGTCTGAGGGA+AGG | - | chr4.3:47219812-47219831 | None:intergenic | 40.0% |
| !! | AGGCCTTGTTGATAATACCT+TGG | + | chr4.3:47219393-47219412 | MS.gene66736:intron | 40.0% |
| AAAGAAGCTCGCTTGCCTTA+AGG | + | chr4.3:47219555-47219574 | MS.gene66736:intron | 45.0% | |
| AGAAGAAGATGGCTCCTTCA+AGG | + | chr4.3:47219782-47219801 | MS.gene66736:CDS | 45.0% | |
| AGAGTTCGGATGTACCCATA+TGG | - | chr4.3:47219337-47219356 | None:intergenic | 45.0% | |
| ATCTTCCTTTGCCTCCAGAA+TGG | + | chr4.3:47220030-47220049 | MS.gene66736:CDS | 45.0% | |
| GAGTTCGGATGTACCCATAT+GGG | - | chr4.3:47219336-47219355 | None:intergenic | 45.0% | |
| TACCAGATGTCTCTTTCGGT+CGG | - | chr4.3:47218961-47218980 | None:intergenic | 45.0% | |
| TCTTCCTTTGCCTCCAGAAT+GGG | + | chr4.3:47220031-47220050 | MS.gene66736:CDS | 45.0% | |
| TGAGGGAAGGTTAACCTTGA+AGG | - | chr4.3:47219799-47219818 | None:intergenic | 45.0% | |
| ! | CGGCCTTATGTATCAAATGG+TGG | + | chr4.3:47219595-47219614 | MS.gene66736:intron | 45.0% |
| !! | TGCCCTAAGGGCATTGTTTA+AGG | - | chr4.3:47219198-47219217 | None:intergenic | 45.0% |
| AGGTTCCAAGAATGTTGGGC+CGG | + | chr4.3:47219575-47219594 | MS.gene66736:intron | 50.0% | |
| CTTCCTTTGCCTCCAGAATG+GGG | + | chr4.3:47220032-47220051 | MS.gene66736:CDS | 50.0% | |
| TTTGCCTCCAGAATGGGGTT+TGG | + | chr4.3:47220037-47220056 | MS.gene66736:CDS | 50.0% | |
| ! | AAACCCCATTCTGGAGGCAA+AGG | - | chr4.3:47220038-47220057 | None:intergenic | 50.0% |
| ! | GGCCGGCCTTATGTATCAAA+TGG | + | chr4.3:47219592-47219611 | MS.gene66736:intron | 50.0% |
| CTAGGTGCCAAACCCCATTC+TGG | - | chr4.3:47220047-47220066 | None:intergenic | 55.0% | |
| TAAGGCCGGCCCAACATTCT+TGG | - | chr4.3:47219583-47219602 | None:intergenic | 55.0% | |
| GGCCGACCGAAAGAGACATC+TGG | + | chr4.3:47218956-47218975 | MS.gene66736:intron | 60.0% | |
| GGTGCCAAACCCCATTCTGG+AGG | - | chr4.3:47220044-47220063 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 47218636 | 47220109 | 47218636 | ID=MS.gene66736 |
| chr4.3 | mRNA | 47218636 | 47220109 | 47218636 | ID=MS.gene66736.t1;Parent=MS.gene66736 |
| chr4.3 | exon | 47218636 | 47218765 | 47218636 | ID=MS.gene66736.t1.exon1;Parent=MS.gene66736.t1 |
| chr4.3 | CDS | 47218636 | 47218765 | 47218636 | ID=cds.MS.gene66736.t1;Parent=MS.gene66736.t1 |
| chr4.3 | exon | 47219727 | 47220109 | 47219727 | ID=MS.gene66736.t1.exon2;Parent=MS.gene66736.t1 |
| chr4.3 | CDS | 47219727 | 47220109 | 47219727 | ID=cds.MS.gene66736.t1;Parent=MS.gene66736.t1 |
| Gene Sequence |
| Protein sequence |
