Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056629.t1 | XP_013456329.1 | 98 | 659 | 13 | 0 | 1 | 659 | 1 | 659 | 0.00E+00 | 1331.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056629.t1 | Q9XIA9 | 67.6 | 654 | 208 | 4 | 9 | 658 | 11 | 664 | 4.9e-274 | 944.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056629.t1 | A0A072UX04 | 98.0 | 659 | 13 | 0 | 1 | 659 | 1 | 659 | 0.0e+00 | 1331.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056629 | MS.gene067755 | 0.812953 | 3.27E-51 | -1.69E-46 |
MS.gene056629 | MS.gene068614 | 0.807748 | 4.34E-50 | -1.69E-46 |
MS.gene056629 | MS.gene069147 | 0.832005 | 1.21E-55 | -1.69E-46 |
MS.gene056629 | MS.gene070876 | 0.80737 | 5.23E-50 | -1.69E-46 |
MS.gene056629 | MS.gene29146 | 0.807103 | 5.95E-50 | -1.69E-46 |
MS.gene056629 | MS.gene40645 | 0.82969 | 4.47E-55 | -1.69E-46 |
MS.gene056629 | MS.gene48257 | 0.803533 | 3.33E-49 | -1.69E-46 |
MS.gene056629 | MS.gene66736 | 0.822119 | 2.81E-53 | -1.69E-46 |
MS.gene056629 | MS.gene86236 | 0.813125 | 3.00E-51 | -1.69E-46 |
MS.gene056629 | MS.gene98287 | 0.801835 | 7.46E-49 | -1.69E-46 |
MS.gene056629 | MS.gene99735 | 0.811189 | 7.93E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene21662 | MS.gene056629 | PPI |
MS.gene056629 | MS.gene33594 | PPI |
MS.gene056629 | MS.gene048924 | PPI |
MS.gene045073 | MS.gene056629 | PPI |
MS.gene21663 | MS.gene056629 | PPI |
MS.gene056629 | MS.gene63009 | PPI |
MS.gene026629 | MS.gene056629 | PPI |
MS.gene056629 | MS.gene044334 | PPI |
MS.gene056629 | MS.gene07328 | PPI |
MS.gene056629 | MS.gene25695 | PPI |
MS.gene75435 | MS.gene056629 | PPI |
MS.gene056629 | MS.gene050419 | PPI |
MS.gene28831 | MS.gene056629 | PPI |
MS.gene22309 | MS.gene056629 | PPI |
MS.gene072726 | MS.gene056629 | PPI |
MS.gene056629 | MS.gene20877 | PPI |
MS.gene70469 | MS.gene056629 | PPI |
MS.gene22308 | MS.gene056629 | PPI |
MS.gene072680 | MS.gene056629 | PPI |
MS.gene06068 | MS.gene056629 | PPI |
MS.gene056629 | MS.gene71307 | PPI |
MS.gene99632 | MS.gene056629 | PPI |
MS.gene056629 | MS.gene55795 | PPI |
MS.gene056629 | MS.gene80076 | PPI |
MS.gene90444 | MS.gene056629 | PPI |
MS.gene056629 | MS.gene005494 | PPI |
MS.gene056629 | MS.gene07080 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056629.t1 | MTR_4g068670 | 98.027 | 659 | 13 | 0 | 1 | 659 | 1 | 659 | 0.0 | 1348 |
MS.gene056629.t1 | MTR_1g034360 | 80.000 | 660 | 130 | 2 | 1 | 658 | 1 | 660 | 0.0 | 1130 |
MS.gene056629.t1 | MTR_5g009350 | 58.589 | 652 | 268 | 2 | 5 | 654 | 6 | 657 | 0.0 | 818 |
MS.gene056629.t1 | MTR_5g009350 | 58.879 | 642 | 262 | 2 | 5 | 644 | 6 | 647 | 0.0 | 809 |
MS.gene056629.t1 | MTR_5g009360 | 57.669 | 652 | 274 | 2 | 5 | 654 | 6 | 657 | 0.0 | 801 |
MS.gene056629.t1 | MTR_8g099420 | 57.427 | 653 | 276 | 2 | 5 | 655 | 7 | 659 | 0.0 | 801 |
MS.gene056629.t1 | MTR_5g009360 | 60.077 | 521 | 206 | 2 | 136 | 654 | 11 | 531 | 0.0 | 664 |
MS.gene056629.t1 | MTR_5g009350 | 56.831 | 549 | 235 | 2 | 5 | 551 | 6 | 554 | 0.0 | 664 |
MS.gene056629.t1 | MTR_5g009350 | 57.486 | 541 | 228 | 2 | 5 | 543 | 6 | 546 | 0.0 | 663 |
MS.gene056629.t1 | MTR_7g109830 | 46.870 | 655 | 344 | 3 | 5 | 656 | 4 | 657 | 0.0 | 629 |
MS.gene056629.t1 | MTR_1g086600 | 45.289 | 658 | 352 | 4 | 5 | 656 | 26 | 681 | 0.0 | 602 |
MS.gene056629.t1 | MTR_1g104810 | 42.320 | 612 | 338 | 8 | 47 | 653 | 18 | 619 | 5.41e-162 | 479 |
MS.gene056629.t1 | MTR_1g104810 | 42.351 | 621 | 336 | 9 | 38 | 653 | 83 | 686 | 8.52e-162 | 481 |
MS.gene056629.t1 | MTR_3g082660 | 32.410 | 614 | 377 | 14 | 65 | 651 | 124 | 726 | 1.13e-93 | 305 |
MS.gene056629.t1 | MTR_1g030290 | 32.125 | 607 | 369 | 15 | 73 | 651 | 103 | 694 | 3.03e-92 | 300 |
MS.gene056629.t1 | MTR_3g087980 | 31.331 | 616 | 378 | 15 | 65 | 651 | 93 | 692 | 1.62e-90 | 296 |
MS.gene056629.t1 | MTR_3g084450 | 24.666 | 673 | 407 | 21 | 47 | 652 | 81 | 720 | 2.38e-45 | 172 |
MS.gene056629.t1 | MTR_3g084470 | 25.599 | 668 | 404 | 23 | 47 | 652 | 79 | 715 | 6.26e-43 | 165 |
MS.gene056629.t1 | MTR_3g084450 | 27.254 | 477 | 285 | 15 | 220 | 652 | 54 | 512 | 8.86e-40 | 153 |
MS.gene056629.t1 | MTR_8g083170 | 25.630 | 675 | 400 | 28 | 47 | 652 | 83 | 724 | 3.22e-37 | 148 |
MS.gene056629.t1 | MTR_2g095510 | 24.606 | 508 | 269 | 23 | 76 | 561 | 53 | 468 | 7.81e-23 | 103 |
MS.gene056629.t1 | MTR_2g095510 | 24.249 | 466 | 253 | 21 | 76 | 519 | 53 | 440 | 2.42e-22 | 100 |
MS.gene056629.t1 | MTR_4g057730 | 23.035 | 547 | 304 | 22 | 27 | 541 | 3 | 464 | 9.28e-21 | 96.7 |
MS.gene056629.t1 | MTR_4g057730 | 23.486 | 545 | 304 | 22 | 27 | 541 | 3 | 464 | 9.29e-21 | 96.3 |
MS.gene056629.t1 | MTR_4g057730 | 23.327 | 523 | 289 | 21 | 27 | 519 | 3 | 443 | 4.40e-20 | 94.0 |
MS.gene056629.t1 | MTR_1g063110 | 25.067 | 375 | 205 | 18 | 191 | 546 | 158 | 475 | 5.66e-20 | 94.4 |
MS.gene056629.t1 | MTR_5g007640 | 24.431 | 483 | 284 | 17 | 79 | 546 | 98 | 514 | 6.76e-20 | 94.4 |
MS.gene056629.t1 | MTR_8g074040 | 22.989 | 522 | 307 | 18 | 44 | 541 | 57 | 507 | 3.86e-17 | 85.9 |
MS.gene056629.t1 | MTR_4g005750 | 23.124 | 493 | 282 | 17 | 76 | 546 | 51 | 468 | 8.31e-17 | 84.3 |
MS.gene056629.t1 | MTR_8g074120 | 23.788 | 433 | 246 | 14 | 132 | 541 | 47 | 418 | 2.87e-16 | 82.8 |
MS.gene056629.t1 | MTR_1g063120 | 22.355 | 501 | 298 | 20 | 68 | 546 | 48 | 479 | 1.47e-15 | 80.5 |
MS.gene056629.t1 | MTR_3g088880 | 25.587 | 383 | 219 | 14 | 150 | 519 | 128 | 457 | 1.92e-15 | 80.1 |
MS.gene056629.t1 | MTR_8g074040 | 24.194 | 434 | 243 | 16 | 132 | 541 | 18 | 389 | 5.15e-14 | 75.5 |
MS.gene056629.t1 | MTR_5g023730 | 27.513 | 189 | 113 | 6 | 375 | 548 | 293 | 472 | 2.64e-12 | 70.1 |
MS.gene056629.t1 | MTR_2g044180 | 23.922 | 255 | 181 | 4 | 79 | 325 | 47 | 296 | 1.74e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056629.t1 | AT1G49430 | 67.584 | 654 | 208 | 4 | 9 | 658 | 11 | 664 | 0.0 | 952 |
MS.gene056629.t1 | AT1G64400 | 54.587 | 654 | 294 | 3 | 5 | 655 | 6 | 659 | 0.0 | 780 |
MS.gene056629.t1 | AT4G23850 | 54.923 | 650 | 291 | 2 | 5 | 652 | 7 | 656 | 0.0 | 776 |
MS.gene056629.t1 | AT4G11030 | 54.573 | 656 | 296 | 2 | 5 | 658 | 7 | 662 | 0.0 | 766 |
MS.gene056629.t1 | AT1G49430 | 66.057 | 492 | 164 | 3 | 9 | 497 | 11 | 502 | 0.0 | 699 |
MS.gene056629.t1 | AT2G47240 | 47.933 | 653 | 334 | 3 | 5 | 653 | 4 | 654 | 0.0 | 637 |
MS.gene056629.t1 | AT2G47240 | 47.933 | 653 | 334 | 3 | 5 | 653 | 4 | 654 | 0.0 | 637 |
MS.gene056629.t1 | AT2G47240 | 47.933 | 653 | 334 | 3 | 5 | 653 | 4 | 654 | 0.0 | 637 |
MS.gene056629.t1 | AT2G47240 | 49.246 | 597 | 297 | 3 | 61 | 653 | 1 | 595 | 0.0 | 600 |
MS.gene056629.t1 | AT5G27600 | 43.719 | 597 | 321 | 8 | 62 | 653 | 103 | 689 | 9.71e-167 | 494 |
MS.gene056629.t1 | AT3G05970 | 44.128 | 596 | 320 | 7 | 62 | 653 | 103 | 689 | 1.68e-165 | 491 |
MS.gene056629.t1 | AT2G04350 | 32.201 | 677 | 368 | 18 | 39 | 651 | 70 | 719 | 7.43e-100 | 321 |
MS.gene056629.t1 | AT2G04350 | 32.201 | 677 | 368 | 18 | 39 | 651 | 70 | 719 | 7.43e-100 | 321 |
MS.gene056629.t1 | AT1G77590 | 32.033 | 615 | 356 | 16 | 73 | 651 | 102 | 690 | 2.33e-93 | 303 |
MS.gene056629.t1 | AT1G77590 | 32.394 | 568 | 322 | 16 | 120 | 651 | 3 | 544 | 1.64e-84 | 276 |
MS.gene056629.t1 | AT3G23790 | 27.105 | 487 | 273 | 15 | 220 | 652 | 264 | 722 | 6.80e-38 | 150 |
MS.gene056629.t1 | AT4G14070 | 23.775 | 694 | 427 | 23 | 19 | 651 | 74 | 726 | 6.99e-37 | 147 |
MS.gene056629.t1 | AT3G21240 | 25.520 | 529 | 295 | 24 | 38 | 546 | 32 | 481 | 1.79e-23 | 104 |
MS.gene056629.t1 | AT3G21240 | 25.520 | 529 | 295 | 24 | 38 | 546 | 32 | 481 | 1.79e-23 | 104 |
MS.gene056629.t1 | AT3G21240 | 25.520 | 529 | 295 | 24 | 38 | 546 | 32 | 481 | 2.47e-23 | 105 |
MS.gene056629.t1 | AT1G51680 | 24.956 | 569 | 327 | 22 | 38 | 581 | 34 | 527 | 1.83e-20 | 95.9 |
MS.gene056629.t1 | AT1G51680 | 24.767 | 537 | 308 | 20 | 38 | 553 | 34 | 495 | 3.96e-20 | 95.1 |
MS.gene056629.t1 | AT1G51680 | 24.906 | 530 | 302 | 20 | 38 | 546 | 34 | 488 | 4.48e-20 | 94.4 |
MS.gene056629.t1 | AT4G05160 | 24.432 | 528 | 298 | 22 | 48 | 561 | 33 | 473 | 1.71e-19 | 92.8 |
MS.gene056629.t1 | AT1G65060 | 24.416 | 471 | 246 | 21 | 79 | 520 | 77 | 466 | 1.19e-16 | 84.0 |
MS.gene056629.t1 | AT1G65060 | 24.468 | 470 | 245 | 21 | 79 | 519 | 77 | 465 | 1.87e-16 | 83.2 |
MS.gene056629.t1 | AT4G19010 | 25.290 | 431 | 243 | 15 | 138 | 541 | 106 | 484 | 6.88e-16 | 81.6 |
MS.gene056629.t1 | AT2G47245 | 43.421 | 76 | 43 | 0 | 21 | 96 | 53 | 128 | 4.06e-15 | 72.8 |
MS.gene056629.t1 | AT3G21230 | 33.742 | 163 | 100 | 7 | 384 | 541 | 331 | 490 | 1.00e-13 | 74.7 |
MS.gene056629.t1 | AT3G21230 | 33.742 | 163 | 100 | 7 | 384 | 541 | 331 | 490 | 1.05e-13 | 74.7 |
MS.gene056629.t1 | AT3G21230 | 33.742 | 163 | 100 | 7 | 384 | 541 | 331 | 490 | 1.06e-13 | 74.3 |
Find 151 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTCAAGGGCCTGTCTTTC+AGG | 0.081617 | 4.3:-36506727 | None:intergenic |
AAAGGCAAGAAAATATATTT+TGG | 0.204586 | 4.3:+36506804 | MS.gene056629:CDS |
CCAGGATATTAGATTCTTAA+TGG | 0.210950 | 4.3:+36505060 | MS.gene056629:intron |
TGATTAGCTATTGTGAGTTT+TGG | 0.237148 | 4.3:+36504254 | MS.gene056629:intron |
TGCGCGCAGATTTGGGTCTA+TGG | 0.296060 | 4.3:+36506667 | MS.gene056629:intron |
GGTGACCGTTGTGGCATATA+TGG | 0.296099 | 4.3:+36503497 | MS.gene056629:CDS |
TCCATTGCAATTATCCATTC+AGG | 0.310666 | 4.3:-36503530 | None:intergenic |
AAGGCGCCTCAATTGGGTTT+TGG | 0.312356 | 4.3:+36504941 | MS.gene056629:CDS |
TCTCCAGGGAAGTCTGGATT+TGG | 0.314714 | 4.3:+36504476 | MS.gene056629:intron |
ATGATAAACTCCACAGCATT+AGG | 0.317381 | 4.3:-36503859 | None:intergenic |
ATCTACAAAGGCGCCTCAAT+TGG | 0.322969 | 4.3:+36504934 | MS.gene056629:CDS |
TTCTTAATAACAACGCCTTT+TGG | 0.336763 | 4.3:-36504564 | None:intergenic |
TCTCCTTTGGCACAAGGATA+TGG | 0.337793 | 4.3:+36505714 | MS.gene056629:CDS |
AAGCAGCGCCTTTCTTTGAT+AGG | 0.344372 | 4.3:+36505507 | MS.gene056629:CDS |
CTCTCCACATCAAAGGGAAT+TGG | 0.349623 | 4.3:-36506994 | None:intergenic |
GGTCTCACTGAATGTTGTTC+GGG | 0.350765 | 4.3:+36505922 | MS.gene056629:intron |
ACTGAAGAGGTTATGGTTGA+TGG | 0.352245 | 4.3:+36506132 | MS.gene056629:CDS |
GAGTTTCTGAGGGTCACTTT+TGG | 0.356676 | 4.3:+36505690 | MS.gene056629:CDS |
TTCATATGTGATCCATTCAT+AGG | 0.360394 | 4.3:-36503328 | None:intergenic |
TGAATTTCTCCAGGGAAGTC+TGG | 0.363081 | 4.3:+36504470 | MS.gene056629:intron |
AATTGAGGCGCCTTTGTAGA+TGG | 0.368444 | 4.3:-36504932 | None:intergenic |
AGATCTTACTGAAGAGGTTA+TGG | 0.369274 | 4.3:+36506125 | MS.gene056629:CDS |
GGATTCAAGCCTTGCTTCAA+TGG | 0.375018 | 4.3:-36506007 | None:intergenic |
TATGATGCTGCCGTCCGAAT+TGG | 0.380179 | 4.3:+36503357 | MS.gene056629:CDS |
ACAGTTGCTAAAGCACTATA+AGG | 0.391355 | 4.3:+36507053 | MS.gene056629:CDS |
CGGGTTCGAATGTTGTTATC+AGG | 0.393583 | 4.3:+36505639 | MS.gene056629:CDS |
AATTTCTCCACGTGGTTGAC+TGG | 0.395081 | 4.3:-36506058 | None:intergenic |
TTGGATGAGCTCAATATCAT+TGG | 0.396853 | 4.3:+36506823 | MS.gene056629:CDS |
AAGACAGGCCCTTGAGGATT+GGG | 0.400721 | 4.3:+36506732 | MS.gene056629:CDS |
AATTATCCATTCAGGACAAT+TGG | 0.406058 | 4.3:-36503522 | None:intergenic |
GATTGCTTTGACAGCAAGTT+GGG | 0.415623 | 4.3:+36505455 | MS.gene056629:intron |
CCTTGCTTCAATGGCTGTCA+TGG | 0.417626 | 4.3:-36505998 | None:intergenic |
ATCTTGACGCTTGTGGTAAC+CGG | 0.418161 | 4.3:-36506106 | None:intergenic |
TGACCCAGCATTGGTTTGCT+AGG | 0.419369 | 4.3:-36502412 | None:intergenic |
TGGAATAGGTCACCATTATC+TGG | 0.422278 | 4.3:-36504912 | None:intergenic |
GGTCTCTTCAATTTGAATGT+TGG | 0.426846 | 4.3:-36507030 | None:intergenic |
CTGATAGATAAAACAAGCAT+TGG | 0.435144 | 4.3:+36505611 | MS.gene056629:intron |
ATCTTTATGTGGAAATCTAA+AGG | 0.435929 | 4.3:+36506786 | MS.gene056629:CDS |
TGTCTGTTAGAGAAAGCATT+TGG | 0.439284 | 4.3:-36504620 | None:intergenic |
CCTCAAGGGCCTGTCTTTCA+GGG | 0.440781 | 4.3:-36506726 | None:intergenic |
AAAGACAGGCCCTTGAGGAT+TGG | 0.441559 | 4.3:+36506731 | MS.gene056629:CDS |
TCCTCATGGCGGATCCAATT+CGG | 0.442563 | 4.3:-36503371 | None:intergenic |
AGGTCTCACTGAATGTTGTT+CGG | 0.445522 | 4.3:+36505921 | MS.gene056629:intron |
GTGCCCTAGCAAACCAATGC+TGG | 0.447637 | 4.3:+36502408 | MS.gene056629:CDS |
CAGGAGCTGCTCCTTTGTCT+AGG | 0.448283 | 4.3:+36505658 | MS.gene056629:CDS |
TGCTTTCTCTAACAGACAAA+GGG | 0.457253 | 4.3:+36504625 | MS.gene056629:CDS |
GCTGGTAAAAGCAGTTCATC+TGG | 0.457715 | 4.3:+36506969 | MS.gene056629:CDS |
GTTGATGGTTGGTTTCATAC+AGG | 0.462235 | 4.3:+36506147 | MS.gene056629:CDS |
AGAACAAGGTGTTCCCTCTC+AGG | 0.464369 | 4.3:-36506083 | None:intergenic |
GCAGTGCCCTCTTATAGCTT+CGG | 0.464981 | 4.3:+36506511 | MS.gene056629:CDS |
TTGGTGCATCCTGCTTCTCA+TGG | 0.466724 | 4.3:+36504315 | MS.gene056629:CDS |
GGCGCCTTTGTAGATGGAAT+AGG | 0.468818 | 4.3:-36504926 | None:intergenic |
AAAGGCGCTGCTTTGTCTTG+TGG | 0.470688 | 4.3:-36505497 | None:intergenic |
CTATGCTAAAGATGGTTTGT+TGG | 0.472097 | 4.3:+36502037 | MS.gene056629:CDS |
TGCAGGCTGGTCCCTATGAA+TGG | 0.473025 | 4.3:+36503316 | MS.gene056629:intron |
AAACATACCGAAGCTATAAG+AGG | 0.476146 | 4.3:-36506518 | None:intergenic |
AGATCTCTCTCCACATCAAA+GGG | 0.477890 | 4.3:-36507000 | None:intergenic |
TCTACAAAGGCGCCTCAATT+GGG | 0.481277 | 4.3:+36504935 | MS.gene056629:CDS |
AAGAAAGAAGTTGAGGAACT+TGG | 0.482103 | 4.3:+36504296 | MS.gene056629:CDS |
ATGGATCCAATTGTCCTGAA+TGG | 0.482348 | 4.3:+36503516 | MS.gene056629:CDS |
GCTTGAATCCGTGCCGGAGA+TGG | 0.487293 | 4.3:+36506020 | MS.gene056629:CDS |
AAGTTGGGATATCTAAATAA+TGG | 0.489028 | 4.3:+36505470 | MS.gene056629:CDS |
GGAACGCCACAGAAAATAGT+TGG | 0.489803 | 4.3:-36505103 | None:intergenic |
AAACCTAGGGTGTCATATAG+TGG | 0.493328 | 4.3:-36503725 | None:intergenic |
AAACTCTTCCCATGAGAAGC+AGG | 0.493686 | 4.3:-36504324 | None:intergenic |
TCATGTATATGACCAGATAA+TGG | 0.494422 | 4.3:+36504900 | MS.gene056629:CDS |
AGAGGGAACACCTTGTTCTC+CGG | 0.495484 | 4.3:+36506087 | MS.gene056629:CDS |
CTTGAATCCGTGCCGGAGAT+GGG | 0.506106 | 4.3:+36506021 | MS.gene056629:CDS |
AGAGAAGTACACATCGTCTT+CGG | 0.511003 | 4.3:-36504863 | None:intergenic |
AGTTGTGATCCCTGAAAGAC+AGG | 0.511172 | 4.3:+36506717 | MS.gene056629:CDS |
ATGTACACAAGTGGAACTAC+TGG | 0.514736 | 4.3:+36504537 | MS.gene056629:CDS |
CAGTAAGATCTTGACGCTTG+TGG | 0.515457 | 4.3:-36506113 | None:intergenic |
AAAACAAGCATTGGGTGGAC+GGG | 0.519110 | 4.3:+36505620 | MS.gene056629:CDS |
ATTGGAGAATGGCTGCCAAA+TGG | 0.524066 | 4.3:+36506398 | MS.gene056629:CDS |
ATGGGAAGAGTTTCTTCAGT+TGG | 0.524380 | 4.3:+36504334 | MS.gene056629:CDS |
GACCCAGCATTGGTTTGCTA+GGG | 0.526702 | 4.3:-36502411 | None:intergenic |
AAAATCATTACAGGTGACAT+TGG | 0.527671 | 4.3:+36506380 | MS.gene056629:intron |
TGATAGATAAAACAAGCATT+GGG | 0.531712 | 4.3:+36505612 | MS.gene056629:intron |
CCCTGAAAGACAGGCCCTTG+AGG | 0.532809 | 4.3:+36506726 | MS.gene056629:CDS |
TAGATCTCTCTCCACATCAA+AGG | 0.534676 | 4.3:-36507001 | None:intergenic |
AGATTGCTTTGACAGCAAGT+TGG | 0.536219 | 4.3:+36505454 | MS.gene056629:intron |
AGATGCATCTATGCTAAAGA+TGG | 0.539890 | 4.3:+36502029 | MS.gene056629:CDS |
CTTGCTTCAATGGCTGTCAT+GGG | 0.543159 | 4.3:-36505997 | None:intergenic |
AATAACAAAATTTCATCAGA+AGG | 0.544297 | 4.3:+36505314 | MS.gene056629:CDS |
GCTTCACTGCCCAATCCTCA+AGG | 0.545815 | 4.3:-36506741 | None:intergenic |
GGAACTACTGGTGAACCAAA+AGG | 0.548158 | 4.3:+36504549 | MS.gene056629:CDS |
AACACAAGCCTATCAAAGAA+AGG | 0.551578 | 4.3:-36505515 | None:intergenic |
ATACCATATCCTTGTGCCAA+AGG | 0.551717 | 4.3:-36505717 | None:intergenic |
TAAAACAAGCATTGGGTGGA+CGG | 0.552014 | 4.3:+36505619 | MS.gene056629:CDS |
AGTGCATCATATCCCATCTC+CGG | 0.553360 | 4.3:-36506033 | None:intergenic |
CAACTATACAAGGAAGCAAA+GGG | 0.554406 | 4.3:+36507303 | MS.gene056629:CDS |
TCATATGTGATCCATTCATA+GGG | 0.559220 | 4.3:-36503327 | None:intergenic |
TAGAGAAAGCATTTGGTCAA+CGG | 0.562498 | 4.3:-36504613 | None:intergenic |
AACATCTTCAAATTGTCTCA+AGG | 0.563185 | 4.3:+36506449 | MS.gene056629:CDS |
ATGCTTTCTCTAACAGACAA+AGG | 0.563403 | 4.3:+36504624 | MS.gene056629:CDS |
TGGTGCATCCTGCTTCTCAT+GGG | 0.565803 | 4.3:+36504316 | MS.gene056629:CDS |
GCGTCAAGATCTTACTGAAG+AGG | 0.568382 | 4.3:+36506119 | MS.gene056629:CDS |
GGAACCAATTCCCTTTGATG+TGG | 0.569636 | 4.3:+36506990 | MS.gene056629:CDS |
TTTGGATCTCCTTTGGCACA+AGG | 0.570755 | 4.3:+36505708 | MS.gene056629:CDS |
TGCCCTAGCAAACCAATGCT+GGG | 0.572632 | 4.3:+36502409 | MS.gene056629:CDS |
TGCACAATCATGTACACAAG+TGG | 0.574438 | 4.3:+36504528 | MS.gene056629:CDS |
CTCAGGCAAATTTCTCCACG+TGG | 0.575376 | 4.3:-36506066 | None:intergenic |
ATTGACGCCACGGCTCCTCA+TGG | 0.575810 | 4.3:-36503385 | None:intergenic |
TCAACTATACAAGGAAGCAA+AGG | 0.578184 | 4.3:+36507302 | MS.gene056629:CDS |
CCATGACAGCCATTGAAGCA+AGG | 0.580357 | 4.3:+36505998 | MS.gene056629:CDS |
CAAGGAAGCAAAGGGAGCAA+TGG | 0.584744 | 4.3:+36507311 | MS.gene056629:CDS |
AGCAAGGCTTGAATCCGTGC+CGG | 0.585755 | 4.3:+36506014 | MS.gene056629:CDS |
AAGAGGTTATGGTTGATGGT+TGG | 0.585803 | 4.3:+36506136 | MS.gene056629:CDS |
CACACAAAAGAAAGAAGTTG+AGG | 0.586579 | 4.3:+36504289 | MS.gene056629:CDS |
GTGGAGAAATTTGCCTGAGA+GGG | 0.588140 | 4.3:+36506070 | MS.gene056629:CDS |
TGTGCAGGGACTCTGCAGCA+AGG | 0.589063 | 4.3:+36502386 | MS.gene056629:intron |
CATATACATGAGCAAGAGGA+AGG | 0.589152 | 4.3:-36504888 | None:intergenic |
TATCACAAGGGTGACCGTTG+TGG | 0.589606 | 4.3:+36503488 | MS.gene056629:intron |
AACATACCGAAGCTATAAGA+GGG | 0.589933 | 4.3:-36506517 | None:intergenic |
TTGTATTGATCAACTATACA+AGG | 0.593056 | 4.3:+36507293 | MS.gene056629:CDS |
ATCATATCCCATCTCCGGCA+CGG | 0.593835 | 4.3:-36506028 | None:intergenic |
CATGGAGATTGAAAATGAGA+AGG | 0.594076 | 4.3:-36502065 | None:intergenic |
CTATACACAGGACCTGCTGA+TGG | 0.594226 | 4.3:-36502008 | None:intergenic |
GGCACGTAGAAGAGTTTCTG+AGG | 0.595393 | 4.3:+36505679 | MS.gene056629:CDS |
TTACAGGTGACATTGGAGAA+TGG | 0.595467 | 4.3:+36506387 | MS.gene056629:intron |
TCCTGAATGGATAATTGCAA+TGG | 0.596918 | 4.3:+36503529 | MS.gene056629:CDS |
GCCTTGCCAAAACCCAATTG+AGG | 0.600652 | 4.3:-36504947 | None:intergenic |
GGATGTATACACTGTGAAAG+TGG | 0.600967 | 4.3:+36501956 | MS.gene056629:CDS |
TGGTCATATACATGAGCAAG+AGG | 0.603137 | 4.3:-36504892 | None:intergenic |
TGAATGGATAATTGCAATGG+AGG | 0.604812 | 4.3:+36503532 | MS.gene056629:CDS |
GGATCCGCCATGAGGAGCCG+TGG | 0.606979 | 4.3:+36503378 | MS.gene056629:CDS |
CTTCACTGCCCAATCCTCAA+GGG | 0.607450 | 4.3:-36506740 | None:intergenic |
GTTTACGATCGTGTTTACGC+TGG | 0.611797 | 4.3:+36505130 | MS.gene056629:CDS |
TGATAGGCTTGTGTTTGACA+AGG | 0.613130 | 4.3:+36505523 | MS.gene056629:CDS |
GCAAACCAATGCTGGGTCAG+CGG | 0.613487 | 4.3:+36502416 | MS.gene056629:CDS |
CTTGTGGTAACCGGAGAACA+AGG | 0.614733 | 4.3:-36506097 | None:intergenic |
CAGTTACAGGATTGACGCCA+CGG | 0.620559 | 4.3:-36503395 | None:intergenic |
CGTGGAGAAATTTGCCTGAG+AGG | 0.624184 | 4.3:+36506069 | MS.gene056629:CDS |
GCTCCACTATATGACACCCT+AGG | 0.626773 | 4.3:+36503722 | MS.gene056629:CDS |
TGAATGGATCACATATGAAG+AGG | 0.627275 | 4.3:+36503332 | MS.gene056629:CDS |
TTATAGTGCTTTAGCAACTG+TGG | 0.630502 | 4.3:-36507051 | None:intergenic |
TAGATAAAACAAGCATTGGG+TGG | 0.647577 | 4.3:+36505615 | MS.gene056629:intron |
TCTTCTACGTGCCTAGACAA+AGG | 0.651689 | 4.3:-36505669 | None:intergenic |
GTGACCTATTCCATCTACAA+AGG | 0.655175 | 4.3:+36504922 | MS.gene056629:CDS |
GACGCCACGGCTCCTCATGG+CGG | 0.655853 | 4.3:-36503382 | None:intergenic |
GCATAGATGCATCTATACAC+AGG | 0.659280 | 4.3:-36502020 | None:intergenic |
GTCTCACTGAATGTTGTTCG+GGG | 0.665474 | 4.3:+36505923 | MS.gene056629:CDS |
ATGCTATAGAAACTTCAGCA+TGG | 0.672567 | 4.3:-36503885 | None:intergenic |
GCTTTCTCTAACAGACAAAG+GGG | 0.673416 | 4.3:+36504626 | MS.gene056629:CDS |
CATGGCGGATCCAATTCGGA+CGG | 0.676326 | 4.3:-36503367 | None:intergenic |
TCCGAATTGGATCCGCCATG+AGG | 0.676397 | 4.3:+36503370 | MS.gene056629:CDS |
TAAACACGATCGTAAACTCG+AGG | 0.686356 | 4.3:-36505124 | None:intergenic |
GCACGTAGAAGAGTTTCTGA+GGG | 0.686603 | 4.3:+36505680 | MS.gene056629:CDS |
TGGATCCATATATGCCACAA+CGG | 0.694452 | 4.3:-36503502 | None:intergenic |
ATAAACAGGACCTAATGCTG+TGG | 0.706682 | 4.3:+36503849 | MS.gene056629:intron |
GCACTCTCCAGTCAACCACG+TGG | 0.730635 | 4.3:+36506051 | MS.gene056629:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCAAAATAAGTTTATAATT+AGG | + | chr4.3:36502827-36502846 | MS.gene056629:intron | 10.0% |
!! | ATGTAAAAAAAATTAAAAAG+TGG | + | chr4.3:36502228-36502247 | MS.gene056629:intron | 10.0% |
!! | TCAAAATAAGTTTATAATTA+GGG | + | chr4.3:36502828-36502847 | MS.gene056629:intron | 10.0% |
!! | ACAAATGAAATAATTAATGA+AGG | - | chr4.3:36504710-36504729 | None:intergenic | 15.0% |
!! | ATTAGTTATTATTTCACAAA+AGG | - | chr4.3:36502756-36502775 | None:intergenic | 15.0% |
!! | ATTATCTTCAAAATATTCAA+TGG | - | chr4.3:36504036-36504055 | None:intergenic | 15.0% |
!! | ATTGATTAACACATTAATAA+TGG | + | chr4.3:36503192-36503211 | MS.gene056629:intron | 15.0% |
!! | ATTTGTCATAAATTCTATAT+GGG | - | chr4.3:36503219-36503238 | None:intergenic | 15.0% |
!! | GTTATAAATATGATATGATT+TGG | + | chr4.3:36503616-36503635 | MS.gene056629:intron | 15.0% |
!! | TATTTGTCATAAATTCTATA+TGG | - | chr4.3:36503220-36503239 | None:intergenic | 15.0% |
!! | TTATCTTCAAAATATTCAAT+GGG | - | chr4.3:36504035-36504054 | None:intergenic | 15.0% |
!! | TTCAAATTTATCTTCATTAT+TGG | + | chr4.3:36507134-36507153 | MS.gene056629:intron | 15.0% |
!!! | AAAGTAAGTAAATGAAATTT+TGG | - | chr4.3:36502637-36502656 | None:intergenic | 15.0% |
!!! | AATTTCATTTACTTACTTTT+AGG | + | chr4.3:36502638-36502657 | MS.gene056629:intron | 15.0% |
!!! | ATTTGTTACTAAATTTACTT+TGG | + | chr4.3:36502488-36502507 | MS.gene056629:intron | 15.0% |
!!! | TTTTCTTTATTTATAAGTGT+GGG | + | chr4.3:36504730-36504749 | MS.gene056629:intron | 15.0% |
!!! | TTTTGTGAAATAATAACTAA+TGG | + | chr4.3:36502755-36502774 | MS.gene056629:intron | 15.0% |
!!! | TTTTTCTTTATTTATAAGTG+TGG | + | chr4.3:36504729-36504748 | MS.gene056629:intron | 15.0% |
!! | AAAGTTTCATGATCTATATT+GGG | + | chr4.3:36502158-36502177 | MS.gene056629:intron | 20.0% |
!! | AACATGTTTAACATACTAAA+TGG | - | chr4.3:36503599-36503618 | None:intergenic | 20.0% |
!! | AATAACAAAATTTCATCAGA+AGG | + | chr4.3:36505314-36505333 | MS.gene056629:CDS | 20.0% |
!! | AGTAGATATGTTTGAATTAA+CGG | + | chr4.3:36506189-36506208 | MS.gene056629:intron | 20.0% |
!! | ATAAAAACTTCGTACATTAA+TGG | - | chr4.3:36506645-36506664 | None:intergenic | 20.0% |
!! | CAATAGGATAGAAATTATAA+AGG | - | chr4.3:36505420-36505439 | None:intergenic | 20.0% |
!! | GTAATCACTAAGATAAAAAA+AGG | - | chr4.3:36506911-36506930 | None:intergenic | 20.0% |
!!! | AAAGGCAAGAAAATATATTT+TGG | + | chr4.3:36506804-36506823 | MS.gene056629:CDS | 20.0% |
!!! | ATGTTAGTCTTATTTTTCAA+TGG | - | chr4.3:36504507-36504526 | None:intergenic | 20.0% |
!!! | ATTTGAAGATGTTCTTTTTT+CGG | - | chr4.3:36506442-36506461 | None:intergenic | 20.0% |
!!! | ATTTGTTGGATATATTGAAT+AGG | + | chr4.3:36503136-36503155 | MS.gene056629:intron | 20.0% |
!!! | ATTTTATCACAGAAGTTAAT+TGG | - | chr4.3:36504234-36504253 | None:intergenic | 20.0% |
!!! | GAATCTTTTGTTAAATATAG+AGG | + | chr4.3:36505752-36505771 | MS.gene056629:intron | 20.0% |
!!! | GATGATTTTAAATCTTTATG+TGG | + | chr4.3:36506775-36506794 | MS.gene056629:CDS | 20.0% |
!!! | TAGCAAAAAAATGCATATTT+TGG | - | chr4.3:36507200-36507219 | None:intergenic | 20.0% |
!!! | TATCATCAAAATGATAATGA+TGG | - | chr4.3:36505900-36505919 | None:intergenic | 20.0% |
!!! | TCTTTTATTCCATCTTTTAA+TGG | + | chr4.3:36504201-36504220 | MS.gene056629:intron | 20.0% |
! | AAAATCTGTGGAAACAAAAA+AGG | - | chr4.3:36504111-36504130 | None:intergenic | 25.0% |
! | AAGAATTCAATTGAATTTGC+AGG | + | chr4.3:36503299-36503318 | MS.gene056629:intron | 25.0% |
! | AAGTTGGGATATCTAAATAA+TGG | + | chr4.3:36505470-36505489 | MS.gene056629:CDS | 25.0% |
! | AAGTTTATTGAGACTGATAA+AGG | - | chr4.3:36503767-36503786 | None:intergenic | 25.0% |
! | AATAGAATGAAACTTACAGA+AGG | - | chr4.3:36503931-36503950 | None:intergenic | 25.0% |
! | AATATCAGAAATTAAGCACA+TGG | - | chr4.3:36506882-36506901 | None:intergenic | 25.0% |
! | ACATGCTATGTACTATTTAT+AGG | + | chr4.3:36504837-36504856 | MS.gene056629:intron | 25.0% |
! | AGTAACAAAAGAACATAGAA+AGG | - | chr4.3:36504176-36504195 | None:intergenic | 25.0% |
! | ATAGTATAGTCTGTTAATAG+AGG | - | chr4.3:36503426-36503445 | None:intergenic | 25.0% |
! | ATCAGAAGGATCAATAAAAA+AGG | + | chr4.3:36505328-36505347 | MS.gene056629:CDS | 25.0% |
! | ATCTTTATGTGGAAATCTAA+AGG | + | chr4.3:36506786-36506805 | MS.gene056629:CDS | 25.0% |
! | CAAAGTTTCATGATCTATAT+TGG | + | chr4.3:36502157-36502176 | MS.gene056629:intron | 25.0% |
! | CAAATCGAAAGATTAACAAA+TGG | - | chr4.3:36502323-36502342 | None:intergenic | 25.0% |
! | CTAGATTAGTAGTATACAAT+AGG | - | chr4.3:36505436-36505455 | None:intergenic | 25.0% |
! | GCTTAGGACATTATTAAATA+AGG | - | chr4.3:36505211-36505230 | None:intergenic | 25.0% |
! | GTACAAAGAACATTAGAAAA+CGG | - | chr4.3:36502196-36502215 | None:intergenic | 25.0% |
! | TACTATTGTGTTACATTTGT+TGG | + | chr4.3:36503080-36503099 | MS.gene056629:intron | 25.0% |
! | TCATGTATTTATGCATAAAC+AGG | + | chr4.3:36503835-36503854 | MS.gene056629:intron | 25.0% |
! | TCATTCTTAATAGTAATTCC+TGG | + | chr4.3:36504989-36505008 | MS.gene056629:intron | 25.0% |
! | TGATAGATAAAACAAGCATT+GGG | + | chr4.3:36505612-36505631 | MS.gene056629:intron | 25.0% |
! | TTAGGATAAATTCAATGCTT+AGG | - | chr4.3:36505227-36505246 | None:intergenic | 25.0% |
!! | ATCTAATGTGTTTTCTATGA+TGG | + | chr4.3:36505960-36505979 | MS.gene056629:CDS | 25.0% |
!! | GTAAGTTTCATTCTATTTCT+TGG | + | chr4.3:36503934-36503953 | MS.gene056629:intron | 25.0% |
!! | TCTAATGTGTTTTCTATGAT+GGG | + | chr4.3:36505961-36505980 | MS.gene056629:CDS | 25.0% |
!! | TCTATGTTCTTTTGTTACTA+AGG | + | chr4.3:36504177-36504196 | MS.gene056629:intron | 25.0% |
!! | TCTTTTGTTAAATATAGAGG+TGG | + | chr4.3:36505755-36505774 | MS.gene056629:intron | 25.0% |
!! | TTGCTGAATTGATTCAAATT+TGG | + | chr4.3:36503663-36503682 | MS.gene056629:intron | 25.0% |
!! | TTGTATTGATCAACTATACA+AGG | + | chr4.3:36507293-36507312 | MS.gene056629:CDS | 25.0% |
!!! | AAATAGTTTTGAGTCTTTCT+TGG | + | chr4.3:36506690-36506709 | MS.gene056629:CDS | 25.0% |
!!! | ATGCTTTGAAAAATCATTAC+AGG | + | chr4.3:36506371-36506390 | MS.gene056629:intron | 25.0% |
!!! | ATTCAACACAAAACTGATTT+TGG | - | chr4.3:36503265-36503284 | None:intergenic | 25.0% |
!!! | CATTATCATTTTGATGATAC+AGG | + | chr4.3:36505901-36505920 | MS.gene056629:intron | 25.0% |
!!! | GTTTCACTTTTTTATTCTCA+AGG | + | chr4.3:36505842-36505861 | MS.gene056629:intron | 25.0% |
AAAATCATTACAGGTGACAT+TGG | + | chr4.3:36506380-36506399 | MS.gene056629:intron | 30.0% | |
AACATCTTCAAATTGTCTCA+AGG | + | chr4.3:36506449-36506468 | MS.gene056629:CDS | 30.0% | |
AATTATCCATTCAGGACAAT+TGG | - | chr4.3:36503525-36503544 | None:intergenic | 30.0% | |
AGAAGAACCATCAAAATCAA+AGG | - | chr4.3:36502365-36502384 | None:intergenic | 30.0% | |
ATGAAACAAGTGAATCATAG+AGG | - | chr4.3:36504667-36504686 | None:intergenic | 30.0% | |
ATGTAAAGAAAAGTAGTGCA+AGG | + | chr4.3:36502983-36503002 | MS.gene056629:intron | 30.0% | |
CAAAAAAGCGGAAAGATATA+AGG | - | chr4.3:36506229-36506248 | None:intergenic | 30.0% | |
CAACAAATGTTCTTTCGAAA+GGG | - | chr4.3:36503124-36503143 | None:intergenic | 30.0% | |
CAATACAATCCTGAAATTGT+TGG | - | chr4.3:36507281-36507300 | None:intergenic | 30.0% | |
CCAGGATATTAGATTCTTAA+TGG | + | chr4.3:36505060-36505079 | MS.gene056629:intron | 30.0% | |
CCATTAAGAATCTAATATCC+TGG | - | chr4.3:36505063-36505082 | None:intergenic | 30.0% | |
CTGATAGATAAAACAAGCAT+TGG | + | chr4.3:36505611-36505630 | MS.gene056629:intron | 30.0% | |
GTTCTTCATTATTGTTTCCT+TGG | + | chr4.3:36503978-36503997 | MS.gene056629:intron | 30.0% | |
TACAACAAGATTATAGCAGT+AGG | - | chr4.3:36505184-36505203 | None:intergenic | 30.0% | |
TAGTGTTTCTTGTATCACAA+GGG | + | chr4.3:36503476-36503495 | MS.gene056629:intron | 30.0% | |
TATAGCACTCTATCTTTGTA+GGG | + | chr4.3:36503555-36503574 | MS.gene056629:intron | 30.0% | |
TATTACAGAAGACAGTTCAA+TGG | - | chr4.3:36505389-36505408 | None:intergenic | 30.0% | |
TATTGAGACTGATAAAGGAA+AGG | - | chr4.3:36503762-36503781 | None:intergenic | 30.0% | |
TCAACACAAAAATTCCATGA+AGG | - | chr4.3:36505035-36505054 | None:intergenic | 30.0% | |
TCATATGTGATCCATTCATA+GGG | - | chr4.3:36503330-36503349 | None:intergenic | 30.0% | |
TCATGTATATGACCAGATAA+TGG | + | chr4.3:36504900-36504919 | MS.gene056629:CDS | 30.0% | |
TTATCATGTAACCACTTCAA+TGG | - | chr4.3:36505876-36505895 | None:intergenic | 30.0% | |
TTCATATGTGATCCATTCAT+AGG | - | chr4.3:36503331-36503350 | None:intergenic | 30.0% | |
! | AAGGTTTGTTTCTTATTCTC+TGG | + | chr4.3:36507072-36507091 | MS.gene056629:intron | 30.0% |
! | ATAATTTTCATGGCTCCATT+TGG | - | chr4.3:36506416-36506435 | None:intergenic | 30.0% |
! | TGTAGTTTGCCTATAAATGT+CGG | + | chr4.3:36506338-36506357 | MS.gene056629:intron | 30.0% |
! | TTCTCATTTTCAATCTCCAT+GGG | + | chr4.3:36502067-36502086 | MS.gene056629:CDS | 30.0% |
! | TTCTTAATAACAACGCCTTT+TGG | - | chr4.3:36504567-36504586 | None:intergenic | 30.0% |
! | TTTTCGGTCGATAATTTTCA+TGG | - | chr4.3:36506426-36506445 | None:intergenic | 30.0% |
!! | CTCTAAAAGTATTTCCTTCA+TGG | + | chr4.3:36505018-36505037 | MS.gene056629:intron | 30.0% |
!! | GATTAGCTATTGTGAGTTTT+GGG | + | chr4.3:36504255-36504274 | MS.gene056629:intron | 30.0% |
!! | TGAACACTAACATTTGTTGT+TGG | + | chr4.3:36503049-36503068 | MS.gene056629:intron | 30.0% |
!! | TGATTAGCTATTGTGAGTTT+TGG | + | chr4.3:36504254-36504273 | MS.gene056629:intron | 30.0% |
!!! | ATTTTTGTGTTGATTCTTCC+AGG | + | chr4.3:36505042-36505061 | MS.gene056629:intron | 30.0% |
AAACATACCGAAGCTATAAG+AGG | - | chr4.3:36506521-36506540 | None:intergenic | 35.0% | |
AAAGAAAAGTAGTGCAAGGA+AGG | + | chr4.3:36502987-36503006 | MS.gene056629:intron | 35.0% | |
AACACAAGCCTATCAAAGAA+AGG | - | chr4.3:36505518-36505537 | None:intergenic | 35.0% | |
AACATACCGAAGCTATAAGA+GGG | - | chr4.3:36506520-36506539 | None:intergenic | 35.0% | |
AAGAAAGAAGTTGAGGAACT+TGG | + | chr4.3:36504296-36504315 | MS.gene056629:CDS | 35.0% | |
AATAGAGGAAGAACAGTTAC+AGG | - | chr4.3:36503411-36503430 | None:intergenic | 35.0% | |
ACTGTTGTAGCATGATGATT+TGG | + | chr4.3:36505820-36505839 | MS.gene056629:intron | 35.0% | |
AGATCTTACTGAAGAGGTTA+TGG | + | chr4.3:36506125-36506144 | MS.gene056629:CDS | 35.0% | |
AGATGCATCTATGCTAAAGA+TGG | + | chr4.3:36502029-36502048 | MS.gene056629:CDS | 35.0% | |
AGGTACAAAAACACAAACCT+AGG | - | chr4.3:36503742-36503761 | None:intergenic | 35.0% | |
ATCAGAAATTAAGCACATGG+TGG | - | chr4.3:36506879-36506898 | None:intergenic | 35.0% | |
ATGAACCACTGTGATCAAAT+AGG | + | chr4.3:36504411-36504430 | MS.gene056629:intron | 35.0% | |
ATGATAAACTCCACAGCATT+AGG | - | chr4.3:36503862-36503881 | None:intergenic | 35.0% | |
ATGCTATAGAAACTTCAGCA+TGG | - | chr4.3:36503888-36503907 | None:intergenic | 35.0% | |
ATGCTTTCTCTAACAGACAA+AGG | + | chr4.3:36504624-36504643 | MS.gene056629:CDS | 35.0% | |
ATTCAATTGAATTTGCAGGC+TGG | + | chr4.3:36503303-36503322 | MS.gene056629:intron | 35.0% | |
CAACTATACAAGGAAGCAAA+GGG | + | chr4.3:36507303-36507322 | MS.gene056629:CDS | 35.0% | |
CACACAAAAGAAAGAAGTTG+AGG | + | chr4.3:36504289-36504308 | MS.gene056629:CDS | 35.0% | |
CATGGAGATTGAAAATGAGA+AGG | - | chr4.3:36502068-36502087 | None:intergenic | 35.0% | |
CCAACAAATGTTCTTTCGAA+AGG | - | chr4.3:36503125-36503144 | None:intergenic | 35.0% | |
CCTTTCGAAAGAACATTTGT+TGG | + | chr4.3:36503122-36503141 | MS.gene056629:intron | 35.0% | |
CTAAAACACCCGACATTTAT+AGG | - | chr4.3:36506350-36506369 | None:intergenic | 35.0% | |
CTAAAAGTCGAAATCACAAG+TGG | - | chr4.3:36505553-36505572 | None:intergenic | 35.0% | |
CTAGTGTTTCTTGTATCACA+AGG | + | chr4.3:36503475-36503494 | MS.gene056629:intron | 35.0% | |
CTGCTGAAAGATGTCTAAAA+TGG | - | chr4.3:36504066-36504085 | None:intergenic | 35.0% | |
CTTGTATCTGAATTTCTCCA+GGG | + | chr4.3:36504462-36504481 | MS.gene056629:intron | 35.0% | |
GGTACAAAAACACAAACCTA+GGG | - | chr4.3:36503741-36503760 | None:intergenic | 35.0% | |
GGTCTCTTCAATTTGAATGT+TGG | - | chr4.3:36507033-36507052 | None:intergenic | 35.0% | |
GGTGTACACATCTTAAAAGT+AGG | + | chr4.3:36504145-36504164 | MS.gene056629:intron | 35.0% | |
GTAGTCACACAATCAGATTT+AGG | - | chr4.3:36505245-36505264 | None:intergenic | 35.0% | |
GTATAGCACTCTATCTTTGT+AGG | + | chr4.3:36503554-36503573 | MS.gene056629:intron | 35.0% | |
TAACATAAGATTGTGCTCCA+AGG | - | chr4.3:36503998-36504017 | None:intergenic | 35.0% | |
TCAACTATACAAGGAAGCAA+AGG | + | chr4.3:36507302-36507321 | MS.gene056629:CDS | 35.0% | |
TCAAGACATGACAAAATCTG+TGG | - | chr4.3:36504123-36504142 | None:intergenic | 35.0% | |
TCCATTGCAATTATCCATTC+AGG | - | chr4.3:36503533-36503552 | None:intergenic | 35.0% | |
TCCTGAATGGATAATTGCAA+TGG | + | chr4.3:36503529-36503548 | MS.gene056629:CDS | 35.0% | |
TCTTGTATCTGAATTTCTCC+AGG | + | chr4.3:36504461-36504480 | MS.gene056629:intron | 35.0% | |
TGAATGGATAATTGCAATGG+AGG | + | chr4.3:36503532-36503551 | MS.gene056629:CDS | 35.0% | |
TGAATGGATCACATATGAAG+AGG | + | chr4.3:36503332-36503351 | MS.gene056629:CDS | 35.0% | |
TGCTTTCTCTAACAGACAAA+GGG | + | chr4.3:36504625-36504644 | MS.gene056629:CDS | 35.0% | |
TTATAGTGCTTTAGCAACTG+TGG | - | chr4.3:36507054-36507073 | None:intergenic | 35.0% | |
TTGGATGAGCTCAATATCAT+TGG | + | chr4.3:36506823-36506842 | MS.gene056629:CDS | 35.0% | |
! | ACAGTTGCTAAAGCACTATA+AGG | + | chr4.3:36507053-36507072 | MS.gene056629:CDS | 35.0% |
! | AGATTTTGTCATGTCTTGAG+CGG | + | chr4.3:36504124-36504143 | MS.gene056629:intron | 35.0% |
! | CATTAGAAAACGGATTTCAC+TGG | - | chr4.3:36502186-36502205 | None:intergenic | 35.0% |
! | CTATGCTAAAGATGGTTTGT+TGG | + | chr4.3:36502037-36502056 | MS.gene056629:CDS | 35.0% |
! | CTCAACTTCTTTCTTTTGTG+TGG | - | chr4.3:36504291-36504310 | None:intergenic | 35.0% |
! | CTGAAACCAACTATTTTCTG+TGG | + | chr4.3:36505097-36505116 | MS.gene056629:CDS | 35.0% |
! | CTTCTCATTTTCAATCTCCA+TGG | + | chr4.3:36502066-36502085 | MS.gene056629:CDS | 35.0% |
! | GAGCACAATCTTTTACATTC+TGG | + | chr4.3:36503956-36503975 | MS.gene056629:intron | 35.0% |
! | GCGGAAAAAAACTGATTCAA+AGG | + | chr4.3:36502435-36502454 | MS.gene056629:CDS | 35.0% |
! | GTAGTTTGCCTATAAATGTC+GGG | + | chr4.3:36506339-36506358 | MS.gene056629:intron | 35.0% |
! | TTGGTAGGAACTCTGATTTT+CGG | + | chr4.3:36504353-36504372 | MS.gene056629:intron | 35.0% |
! | TTTTGACACAAGCAATCTCA+AGG | + | chr4.3:36502923-36502942 | MS.gene056629:intron | 35.0% |
!! | ATACTTTTAGAGATTGAGCC+AGG | - | chr4.3:36505010-36505029 | None:intergenic | 35.0% |
!! | CAACACAAAACTGATTTTGG+TGG | - | chr4.3:36503262-36503281 | None:intergenic | 35.0% |
!! | GATTCAAATTTGGTGTTTGC+AGG | + | chr4.3:36503673-36503692 | MS.gene056629:intron | 35.0% |
!! | GATTGATTTTCTCAGCTTAG+AGG | + | chr4.3:36506940-36506959 | MS.gene056629:intron | 35.0% |
!! | TAAGCTTAACTTGCACTTGA+AGG | + | chr4.3:36505287-36505306 | MS.gene056629:intron | 35.0% |
!! | TAGAGAAAGCATTTGGTCAA+CGG | - | chr4.3:36504616-36504635 | None:intergenic | 35.0% |
!! | TAGATAAAACAAGCATTGGG+TGG | + | chr4.3:36505615-36505634 | MS.gene056629:intron | 35.0% |
!! | TGTCTGTTAGAGAAAGCATT+TGG | - | chr4.3:36504623-36504642 | None:intergenic | 35.0% |
!! | TGTGTTTTCTATGATGGGAA+CGG | + | chr4.3:36505966-36505985 | MS.gene056629:CDS | 35.0% |
!!! | AATCTCCATGGGATTTTTTC+AGG | + | chr4.3:36502078-36502097 | MS.gene056629:CDS | 35.0% |
!!! | TAGTTTTGAGTCTTTCTTGG+TGG | + | chr4.3:36506693-36506712 | MS.gene056629:CDS | 35.0% |
!!! | TTTATTTTGCGCGCAGATTT+GGG | + | chr4.3:36506660-36506679 | MS.gene056629:intron | 35.0% |
!!! | TTTTATTTTGCGCGCAGATT+TGG | + | chr4.3:36506659-36506678 | MS.gene056629:intron | 35.0% |
AATCGCCTATTTGATCACAG+TGG | - | chr4.3:36504419-36504438 | None:intergenic | 40.0% | |
AATTAAAAAGTGGCCCATGC+AGG | + | chr4.3:36502238-36502257 | MS.gene056629:intron | 40.0% | |
ACTGAAGAGGTTATGGTTGA+TGG | + | chr4.3:36506132-36506151 | MS.gene056629:CDS | 40.0% | |
AGATCTCTCTCCACATCAAA+GGG | - | chr4.3:36507003-36507022 | None:intergenic | 40.0% | |
AGATTGCTTTGACAGCAAGT+TGG | + | chr4.3:36505454-36505473 | MS.gene056629:intron | 40.0% | |
AGGTCTCACTGAATGTTGTT+CGG | + | chr4.3:36505921-36505940 | MS.gene056629:intron | 40.0% | |
AGTCATGAAAAACCATCAGC+AGG | + | chr4.3:36501996-36502015 | MS.gene056629:CDS | 40.0% | |
ATAAACAGGACCTAATGCTG+TGG | + | chr4.3:36503849-36503868 | MS.gene056629:intron | 40.0% | |
ATACCATATCCTTGTGCCAA+AGG | - | chr4.3:36505720-36505739 | None:intergenic | 40.0% | |
ATGGATCCAATTGTCCTGAA+TGG | + | chr4.3:36503516-36503535 | MS.gene056629:CDS | 40.0% | |
ATGGGAAGAGTTTCTTCAGT+TGG | + | chr4.3:36504334-36504353 | MS.gene056629:CDS | 40.0% | |
ATGTACACAAGTGGAACTAC+TGG | + | chr4.3:36504537-36504556 | MS.gene056629:CDS | 40.0% | |
CAGTACCTGAAAAAATCCCA+TGG | - | chr4.3:36502086-36502105 | None:intergenic | 40.0% | |
CATATACATGAGCAAGAGGA+AGG | - | chr4.3:36504891-36504910 | None:intergenic | 40.0% | |
CTCTAACCAACTGAGCTAAT+GGG | + | chr4.3:36502297-36502316 | MS.gene056629:intron | 40.0% | |
GAAGAGTTTCTTCAGTTGGT+AGG | + | chr4.3:36504338-36504357 | MS.gene056629:intron | 40.0% | |
GATTGCTTTGACAGCAAGTT+GGG | + | chr4.3:36505455-36505474 | MS.gene056629:intron | 40.0% | |
GCATAGATGCATCTATACAC+AGG | - | chr4.3:36502023-36502042 | None:intergenic | 40.0% | |
GCTTTCTCTAACAGACAAAG+GGG | + | chr4.3:36504626-36504645 | MS.gene056629:CDS | 40.0% | |
GGATGTATACACTGTGAAAG+TGG | + | chr4.3:36501956-36501975 | MS.gene056629:CDS | 40.0% | |
GTGACCTATTCCATCTACAA+AGG | + | chr4.3:36504922-36504941 | MS.gene056629:CDS | 40.0% | |
TAAACACGATCGTAAACTCG+AGG | - | chr4.3:36505127-36505146 | None:intergenic | 40.0% | |
TAGATCTCTCTCCACATCAA+AGG | - | chr4.3:36507004-36507023 | None:intergenic | 40.0% | |
TGATAGGCTTGTGTTTGACA+AGG | + | chr4.3:36505523-36505542 | MS.gene056629:CDS | 40.0% | |
TGATGGTTCTTCTTTGTGCA+GGG | + | chr4.3:36502372-36502391 | MS.gene056629:intron | 40.0% | |
TGCACAATCATGTACACAAG+TGG | + | chr4.3:36504528-36504547 | MS.gene056629:CDS | 40.0% | |
TGGAATAGGTCACCATTATC+TGG | - | chr4.3:36504915-36504934 | None:intergenic | 40.0% | |
TGGATCCATATATGCCACAA+CGG | - | chr4.3:36503505-36503524 | None:intergenic | 40.0% | |
TGGTCATATACATGAGCAAG+AGG | - | chr4.3:36504895-36504914 | None:intergenic | 40.0% | |
TTACAGGTGACATTGGAGAA+TGG | + | chr4.3:36506387-36506406 | MS.gene056629:intron | 40.0% | |
! | AAACCTAGGGTGTCATATAG+TGG | - | chr4.3:36503728-36503747 | None:intergenic | 40.0% |
! | AGAGAAGTACACATCGTCTT+CGG | - | chr4.3:36504866-36504885 | None:intergenic | 40.0% |
! | AGGAGTGTATTCCATTGAAG+TGG | + | chr4.3:36505862-36505881 | MS.gene056629:intron | 40.0% |
! | GGTTAGCTGCCATTAAAAGA+TGG | - | chr4.3:36504213-36504232 | None:intergenic | 40.0% |
! | TAGGAACTCTGATTTTCGGT+TGG | + | chr4.3:36504357-36504376 | MS.gene056629:intron | 40.0% |
! | TTGATGGTTCTTCTTTGTGC+AGG | + | chr4.3:36502371-36502390 | MS.gene056629:intron | 40.0% |
! | TTTTCCTCGCCAACAATTTC+AGG | + | chr4.3:36507269-36507288 | MS.gene056629:intron | 40.0% |
!! | AAGAGGTTATGGTTGATGGT+TGG | + | chr4.3:36506136-36506155 | MS.gene056629:CDS | 40.0% |
!! | CACAAAACTGATTTTGGTGG+TGG | - | chr4.3:36503259-36503278 | None:intergenic | 40.0% |
!! | CGTGAAGCCTTTGATTTTGA+TGG | + | chr4.3:36502355-36502374 | MS.gene056629:intron | 40.0% |
!! | GTTGATGGTTGGTTTCATAC+AGG | + | chr4.3:36506147-36506166 | MS.gene056629:CDS | 40.0% |
!! | TAAAACAAGCATTGGGTGGA+CGG | + | chr4.3:36505619-36505638 | MS.gene056629:CDS | 40.0% |
!! | TTTTCTATGATGGGAACGGT+TGG | + | chr4.3:36505970-36505989 | MS.gene056629:CDS | 40.0% |
!!! | AAAACTGATTTTGGTGGTGG+TGG | - | chr4.3:36503256-36503275 | None:intergenic | 40.0% |
!!! | AAACTGATTTTGGTGGTGGT+GGG | - | chr4.3:36503255-36503274 | None:intergenic | 40.0% |
AAACTCTTCCCATGAGAAGC+AGG | - | chr4.3:36504327-36504346 | None:intergenic | 45.0% | |
AAATGGCCCATTAGCTCAGT+TGG | - | chr4.3:36502306-36502325 | None:intergenic | 45.0% | |
AAGCAGCGCCTTTCTTTGAT+AGG | + | chr4.3:36505507-36505526 | MS.gene056629:CDS | 45.0% | |
AATTTCTCCACGTGGTTGAC+TGG | - | chr4.3:36506061-36506080 | None:intergenic | 45.0% | |
AGTGCATCATATCCCATCTC+CGG | - | chr4.3:36506036-36506055 | None:intergenic | 45.0% | |
AGTTGTGATCCCTGAAAGAC+AGG | + | chr4.3:36506717-36506736 | MS.gene056629:CDS | 45.0% | |
ATCTTGACGCTTGTGGTAAC+CGG | - | chr4.3:36506109-36506128 | None:intergenic | 45.0% | |
ATTGGAGAATGGCTGCCAAA+TGG | + | chr4.3:36506398-36506417 | MS.gene056629:CDS | 45.0% | |
CAATCCTGAAATTGTTGGCG+AGG | - | chr4.3:36507276-36507295 | None:intergenic | 45.0% | |
CAGTAAGATCTTGACGCTTG+TGG | - | chr4.3:36506116-36506135 | None:intergenic | 45.0% | |
CGGGTTCGAATGTTGTTATC+AGG | + | chr4.3:36505639-36505658 | MS.gene056629:CDS | 45.0% | |
CTCTCCACATCAAAGGGAAT+TGG | - | chr4.3:36506997-36507016 | None:intergenic | 45.0% | |
CTTGCTTCAATGGCTGTCAT+GGG | - | chr4.3:36506000-36506019 | None:intergenic | 45.0% | |
GCACGTAGAAGAGTTTCTGA+GGG | + | chr4.3:36505680-36505699 | MS.gene056629:CDS | 45.0% | |
GCGTCAAGATCTTACTGAAG+AGG | + | chr4.3:36506119-36506138 | MS.gene056629:CDS | 45.0% | |
GCTCTAACCAACTGAGCTAA+TGG | + | chr4.3:36502296-36502315 | MS.gene056629:intron | 45.0% | |
GCTGGTAAAAGCAGTTCATC+TGG | + | chr4.3:36506969-36506988 | MS.gene056629:CDS | 45.0% | |
GGAACCAATTCCCTTTGATG+TGG | + | chr4.3:36506990-36507009 | MS.gene056629:CDS | 45.0% | |
GGAACGCCACAGAAAATAGT+TGG | - | chr4.3:36505106-36505125 | None:intergenic | 45.0% | |
GGAACTACTGGTGAACCAAA+AGG | + | chr4.3:36504549-36504568 | MS.gene056629:CDS | 45.0% | |
GGATTCAAGCCTTGCTTCAA+TGG | - | chr4.3:36506010-36506029 | None:intergenic | 45.0% | |
GGTCTCACTGAATGTTGTTC+GGG | + | chr4.3:36505922-36505941 | MS.gene056629:intron | 45.0% | |
GTCTCACTGAATGTTGTTCG+GGG | + | chr4.3:36505923-36505942 | MS.gene056629:CDS | 45.0% | |
GTGGAGAAATTTGCCTGAGA+GGG | + | chr4.3:36506070-36506089 | MS.gene056629:CDS | 45.0% | |
GTTTACGATCGTGTTTACGC+TGG | + | chr4.3:36505130-36505149 | MS.gene056629:CDS | 45.0% | |
TCTCCTTTGGCACAAGGATA+TGG | + | chr4.3:36505714-36505733 | MS.gene056629:CDS | 45.0% | |
TCTTCTACGTGCCTAGACAA+AGG | - | chr4.3:36505672-36505691 | None:intergenic | 45.0% | |
TGAATTTCTCCAGGGAAGTC+TGG | + | chr4.3:36504470-36504489 | MS.gene056629:intron | 45.0% | |
TTTGGATCTCCTTTGGCACA+AGG | + | chr4.3:36505708-36505727 | MS.gene056629:CDS | 45.0% | |
! | AATTGAGGCGCCTTTGTAGA+TGG | - | chr4.3:36504935-36504954 | None:intergenic | 45.0% |
! | AGTGCAAGGAAGGAGTGTAA+GGG | + | chr4.3:36502997-36503016 | MS.gene056629:intron | 45.0% |
! | TAGTGCAAGGAAGGAGTGTA+AGG | + | chr4.3:36502996-36503015 | MS.gene056629:intron | 45.0% |
!! | AAAACAAGCATTGGGTGGAC+GGG | + | chr4.3:36505620-36505639 | MS.gene056629:CDS | 45.0% |
!! | ATCTACAAAGGCGCCTCAAT+TGG | + | chr4.3:36504934-36504953 | MS.gene056629:CDS | 45.0% |
!! | GAGTTTCTGAGGGTCACTTT+TGG | + | chr4.3:36505690-36505709 | MS.gene056629:CDS | 45.0% |
!! | TCTACAAAGGCGCCTCAATT+GGG | + | chr4.3:36504935-36504954 | MS.gene056629:CDS | 45.0% |
!!! | AACTGATTTTGGTGGTGGTG+GGG | - | chr4.3:36503254-36503273 | None:intergenic | 45.0% |
!!! | GGTCACTTTTGGATCTCCTT+TGG | + | chr4.3:36505701-36505720 | MS.gene056629:CDS | 45.0% |
!!! | TCAGCTTAGAGGTTTTGAGC+TGG | + | chr4.3:36506951-36506970 | MS.gene056629:intron | 45.0% |
!!! | AAAATTAATTTACTATTTTT+TGG | - | chr4.3:36502676-36502695 | None:intergenic | 5.0% |
AAAGACAGGCCCTTGAGGAT+TGG | + | chr4.3:36506731-36506750 | MS.gene056629:CDS | 50.0% | |
AAGACAGGCCCTTGAGGATT+GGG | + | chr4.3:36506732-36506751 | MS.gene056629:CDS | 50.0% | |
AGAGGGAACACCTTGTTCTC+CGG | + | chr4.3:36506087-36506106 | MS.gene056629:CDS | 50.0% | |
ATCATATCCCATCTCCGGCA+CGG | - | chr4.3:36506031-36506050 | None:intergenic | 50.0% | |
CAAGGAAGCAAAGGGAGCAA+TGG | + | chr4.3:36507311-36507330 | MS.gene056629:CDS | 50.0% | |
CAGTTACAGGATTGACGCCA+CGG | - | chr4.3:36503398-36503417 | None:intergenic | 50.0% | |
CCATGACAGCCATTGAAGCA+AGG | + | chr4.3:36505998-36506017 | MS.gene056629:CDS | 50.0% | |
CCTTGCTTCAATGGCTGTCA+TGG | - | chr4.3:36506001-36506020 | None:intergenic | 50.0% | |
CGATCGTGTTTACGCTGGTA+AGG | + | chr4.3:36505135-36505154 | MS.gene056629:intron | 50.0% | |
CGTGGAGAAATTTGCCTGAG+AGG | + | chr4.3:36506069-36506088 | MS.gene056629:CDS | 50.0% | |
CTATACACAGGACCTGCTGA+TGG | - | chr4.3:36502011-36502030 | None:intergenic | 50.0% | |
CTCAGGCAAATTTCTCCACG+TGG | - | chr4.3:36506069-36506088 | None:intergenic | 50.0% | |
CTTCACTGCCCAATCCTCAA+GGG | - | chr4.3:36506743-36506762 | None:intergenic | 50.0% | |
CTTGTGGTAACCGGAGAACA+AGG | - | chr4.3:36506100-36506119 | None:intergenic | 50.0% | |
GATCCAAATCCAGACTTCCC+TGG | - | chr4.3:36504482-36504501 | None:intergenic | 50.0% | |
GCAGTGCCCTCTTATAGCTT+CGG | + | chr4.3:36506511-36506530 | MS.gene056629:CDS | 50.0% | |
GCCTTGCCAAAACCCAATTG+AGG | - | chr4.3:36504950-36504969 | None:intergenic | 50.0% | |
GCTCCACTATATGACACCCT+AGG | + | chr4.3:36503722-36503741 | MS.gene056629:CDS | 50.0% | |
GGCACGTAGAAGAGTTTCTG+AGG | + | chr4.3:36505679-36505698 | MS.gene056629:CDS | 50.0% | |
GGCGCCTTTGTAGATGGAAT+AGG | - | chr4.3:36504929-36504948 | None:intergenic | 50.0% | |
GGTGACCGTTGTGGCATATA+TGG | + | chr4.3:36503497-36503516 | MS.gene056629:CDS | 50.0% | |
TATCACAAGGGTGACCGTTG+TGG | + | chr4.3:36503488-36503507 | MS.gene056629:intron | 50.0% | |
TATGATGCTGCCGTCCGAAT+TGG | + | chr4.3:36503357-36503376 | MS.gene056629:CDS | 50.0% | |
TCTCCAGGGAAGTCTGGATT+TGG | + | chr4.3:36504476-36504495 | MS.gene056629:intron | 50.0% | |
TGCCCTAGCAAACCAATGCT+GGG | + | chr4.3:36502409-36502428 | MS.gene056629:CDS | 50.0% | |
TGGTGCATCCTGCTTCTCAT+GGG | + | chr4.3:36504316-36504335 | MS.gene056629:CDS | 50.0% | |
TTGGTGCATCCTGCTTCTCA+TGG | + | chr4.3:36504315-36504334 | MS.gene056629:CDS | 50.0% | |
! | AGAACAAGGTGTTCCCTCTC+AGG | - | chr4.3:36506086-36506105 | None:intergenic | 50.0% |
! | TTTTTCCGCTGACCCAGCAT+TGG | - | chr4.3:36502424-36502443 | None:intergenic | 50.0% |
!! | AAAGGCGCTGCTTTGTCTTG+TGG | - | chr4.3:36505500-36505519 | None:intergenic | 50.0% |
!! | AAGGCGCCTCAATTGGGTTT+TGG | + | chr4.3:36504941-36504960 | MS.gene056629:CDS | 50.0% |
!! | GACCCAGCATTGGTTTGCTA+GGG | - | chr4.3:36502414-36502433 | None:intergenic | 50.0% |
!! | GCCTCAATTGGGTTTTGGCA+AGG | + | chr4.3:36504946-36504965 | MS.gene056629:CDS | 50.0% |
!! | TCCTCATGGCGGATCCAATT+CGG | - | chr4.3:36503374-36503393 | None:intergenic | 50.0% |
!! | TGACCCAGCATTGGTTTGCT+AGG | - | chr4.3:36502415-36502434 | None:intergenic | 50.0% |
!!! | ACTGATTTTGGTGGTGGTGG+GGG | - | chr4.3:36503253-36503272 | None:intergenic | 50.0% |
AGCAAGGCTTGAATCCGTGC+CGG | + | chr4.3:36506014-36506033 | MS.gene056629:CDS | 55.0% | |
CAGGAGCTGCTCCTTTGTCT+AGG | + | chr4.3:36505658-36505677 | MS.gene056629:CDS | 55.0% | |
CCTCAAGGGCCTGTCTTTCA+GGG | - | chr4.3:36506729-36506748 | None:intergenic | 55.0% | |
CGCAGGTTCGAAACCTGCAT+GGG | - | chr4.3:36502254-36502273 | None:intergenic | 55.0% | |
CTTGAATCCGTGCCGGAGAT+GGG | + | chr4.3:36506021-36506040 | MS.gene056629:CDS | 55.0% | |
GCAAACCAATGCTGGGTCAG+CGG | + | chr4.3:36502416-36502435 | MS.gene056629:CDS | 55.0% | |
GCGTCGTGCTAATAACGCGA+AGG | - | chr4.3:36502278-36502297 | None:intergenic | 55.0% | |
GCTAATAACGCGAAGGTCGC+AGG | - | chr4.3:36502271-36502290 | None:intergenic | 55.0% | |
GCTTCACTGCCCAATCCTCA+AGG | - | chr4.3:36506744-36506763 | None:intergenic | 55.0% | |
GTGCCCTAGCAAACCAATGC+TGG | + | chr4.3:36502408-36502427 | MS.gene056629:CDS | 55.0% | |
TCCGAATTGGATCCGCCATG+AGG | + | chr4.3:36503370-36503389 | MS.gene056629:CDS | 55.0% | |
TCCTCAAGGGCCTGTCTTTC+AGG | - | chr4.3:36506730-36506749 | None:intergenic | 55.0% | |
TCGCAGGTTCGAAACCTGCA+TGG | - | chr4.3:36502255-36502274 | None:intergenic | 55.0% | |
TGCGCGCAGATTTGGGTCTA+TGG | + | chr4.3:36506667-36506686 | MS.gene056629:intron | 55.0% | |
! | TGCAGGCTGGTCCCTATGAA+TGG | + | chr4.3:36503316-36503335 | MS.gene056629:intron | 55.0% |
!! | CATGGCGGATCCAATTCGGA+CGG | - | chr4.3:36503370-36503389 | None:intergenic | 55.0% |
!! | TTTGGTGGTGGTGGGGGTAT+GGG | - | chr4.3:36503247-36503266 | None:intergenic | 55.0% |
!!! | TTTTGGTGGTGGTGGGGGTA+TGG | - | chr4.3:36503248-36503267 | None:intergenic | 55.0% |
ATTGACGCCACGGCTCCTCA+TGG | - | chr4.3:36503388-36503407 | None:intergenic | 60.0% | |
CCCTGAAAGACAGGCCCTTG+AGG | + | chr4.3:36506726-36506745 | MS.gene056629:CDS | 60.0% | |
GCACTCTCCAGTCAACCACG+TGG | + | chr4.3:36506051-36506070 | MS.gene056629:CDS | 60.0% | |
GCTTGAATCCGTGCCGGAGA+TGG | + | chr4.3:36506020-36506039 | MS.gene056629:CDS | 60.0% | |
TGTGCAGGGACTCTGCAGCA+AGG | + | chr4.3:36502386-36502405 | MS.gene056629:intron | 60.0% | |
!! | TTGGTGGTGGTGGGGGTATG+GGG | - | chr4.3:36503246-36503265 | None:intergenic | 60.0% |
!! | TGGTGGTGGTGGGGGTATGG+GGG | - | chr4.3:36503245-36503264 | None:intergenic | 65.0% |
GACGCCACGGCTCCTCATGG+CGG | - | chr4.3:36503385-36503404 | None:intergenic | 70.0% | |
GGATCCGCCATGAGGAGCCG+TGG | + | chr4.3:36503378-36503397 | MS.gene056629:CDS | 70.0% | |
!! | GGTGGTGGTGGGGGTATGGG+GGG | - | chr4.3:36503244-36503263 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 36501951 | 36507338 | 36501951 | ID=MS.gene056629 |
chr4.3 | mRNA | 36501951 | 36507338 | 36501951 | ID=MS.gene056629.t1;Parent=MS.gene056629 |
chr4.3 | exon | 36501951 | 36502099 | 36501951 | ID=MS.gene056629.t1.exon1;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36501951 | 36502099 | 36501951 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36502393 | 36502456 | 36502393 | ID=MS.gene056629.t1.exon2;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36502393 | 36502456 | 36502393 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36503321 | 36503410 | 36503321 | ID=MS.gene056629.t1.exon3;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36503321 | 36503410 | 36503321 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36503497 | 36503553 | 36503497 | ID=MS.gene056629.t1.exon4;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36503497 | 36503553 | 36503497 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36503695 | 36503743 | 36503695 | ID=MS.gene056629.t1.exon5;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36503695 | 36503743 | 36503695 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36503857 | 36503933 | 36503857 | ID=MS.gene056629.t1.exon6;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36503857 | 36503933 | 36503857 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36504126 | 36504162 | 36504126 | ID=MS.gene056629.t1.exon7;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36504126 | 36504162 | 36504126 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36504261 | 36504355 | 36504261 | ID=MS.gene056629.t1.exon8;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36504261 | 36504355 | 36504261 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36504483 | 36504647 | 36504483 | ID=MS.gene056629.t1.exon9;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36504483 | 36504647 | 36504483 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36504859 | 36504969 | 36504859 | ID=MS.gene056629.t1.exon10;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36504859 | 36504969 | 36504859 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36505064 | 36505151 | 36505064 | ID=MS.gene056629.t1.exon11;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36505064 | 36505151 | 36505064 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36505309 | 36505375 | 36505309 | ID=MS.gene056629.t1.exon12;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36505309 | 36505375 | 36505309 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36505469 | 36505544 | 36505469 | ID=MS.gene056629.t1.exon13;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36505469 | 36505544 | 36505469 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36505618 | 36505735 | 36505618 | ID=MS.gene056629.t1.exon14;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36505618 | 36505735 | 36505618 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36505923 | 36506168 | 36505923 | ID=MS.gene056629.t1.exon15;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36505923 | 36506168 | 36505923 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36506393 | 36506532 | 36506393 | ID=MS.gene056629.t1.exon16;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36506393 | 36506532 | 36506393 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36506676 | 36506858 | 36506676 | ID=MS.gene056629.t1.exon17;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36506676 | 36506858 | 36506676 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36506955 | 36507074 | 36506955 | ID=MS.gene056629.t1.exon18;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36506955 | 36507074 | 36506955 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
chr4.3 | exon | 36507291 | 36507338 | 36507291 | ID=MS.gene056629.t1.exon19;Parent=MS.gene056629.t1 |
chr4.3 | CDS | 36507291 | 36507338 | 36507291 | ID=cds.MS.gene056629.t1;Parent=MS.gene056629.t1 |
Gene Sequence |
Protein sequence |