Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70240.t1 | XP_003630220.2 | 95.3 | 1319 | 62 | 0 | 1 | 1319 | 1 | 1319 | 0.00E+00 | 2460.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70240.t1 | Q6Q4D0 | 48.6 | 1334 | 639 | 18 | 4 | 1318 | 5 | 1310 | 0.0e+00 | 1133.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70240.t1 | G7LD57 | 95.3 | 1319 | 62 | 0 | 1 | 1319 | 1 | 1319 | 0.0e+00 | 2460.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene70240 | 0.834939 | 2.24E-56 | -1.69E-46 |
| MS.gene04985 | MS.gene70240 | 0.8077 | 4.45E-50 | -1.69E-46 |
| MS.gene049989 | MS.gene70240 | 0.814692 | 1.35E-51 | -1.69E-46 |
| MS.gene050071 | MS.gene70240 | 0.854461 | 1.21E-61 | -1.69E-46 |
| MS.gene050297 | MS.gene70240 | 0.852613 | 4.11E-61 | -1.69E-46 |
| MS.gene050648 | MS.gene70240 | 0.80015 | 1.65E-48 | -1.69E-46 |
| MS.gene050818 | MS.gene70240 | 0.821017 | 5.05E-53 | -1.69E-46 |
| MS.gene050864 | MS.gene70240 | 0.800985 | 1.11E-48 | -1.69E-46 |
| MS.gene050894 | MS.gene70240 | 0.843552 | 1.31E-58 | -1.69E-46 |
| MS.gene05124 | MS.gene70240 | 0.811846 | 5.71E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene70240 | 0.807548 | 4.79E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene70240 | 0.832211 | 1.08E-55 | -1.69E-46 |
| MS.gene054585 | MS.gene70240 | 0.842016 | 3.34E-58 | -1.69E-46 |
| MS.gene054643 | MS.gene70240 | 0.837474 | 5.09E-57 | -1.69E-46 |
| MS.gene054999 | MS.gene70240 | 0.80583 | 1.10E-49 | -1.69E-46 |
| MS.gene055251 | MS.gene70240 | 0.852788 | 3.67E-61 | -1.69E-46 |
| MS.gene055331 | MS.gene70240 | 0.875652 | 2.60E-68 | -1.69E-46 |
| MS.gene055411 | MS.gene70240 | 0.806886 | 6.62E-50 | -1.69E-46 |
| MS.gene055764 | MS.gene70240 | 0.816305 | 5.92E-52 | -1.69E-46 |
| MS.gene056266 | MS.gene70240 | -0.848697 | 5.19E-60 | -1.69E-46 |
| MS.gene057483 | MS.gene70240 | 0.801736 | 7.82E-49 | -1.69E-46 |
| MS.gene058210 | MS.gene70240 | 0.80968 | 1.68E-50 | -1.69E-46 |
| MS.gene058844 | MS.gene70240 | 0.810314 | 1.23E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene70240 | 0.84718 | 1.36E-59 | -1.69E-46 |
| MS.gene060076 | MS.gene70240 | 0.808354 | 3.23E-50 | -1.69E-46 |
| MS.gene060359 | MS.gene70240 | 0.812252 | 4.66E-51 | -1.69E-46 |
| MS.gene06057 | MS.gene70240 | 0.838388 | 2.96E-57 | -1.69E-46 |
| MS.gene060855 | MS.gene70240 | 0.806371 | 8.50E-50 | -1.69E-46 |
| MS.gene061044 | MS.gene70240 | 0.80753 | 4.83E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70240.t1 | MTR_8g093100 | 97.574 | 1319 | 32 | 0 | 1 | 1319 | 1 | 1319 | 0.0 | 2662 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70240.t1 | AT3G18730 | 48.790 | 1322 | 630 | 19 | 16 | 1318 | 17 | 1310 | 0.0 | 1159 |
Find 249 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGAAGTGCTTAACATTTC+TGG | 0.089131 | 4.1:-8664770 | MS.gene70240:CDS |
| AGTAGGTTACATCACAATTT+AGG | 0.138361 | 4.1:-8671837 | MS.gene70240:CDS |
| GAAGAAACTTTACAATTTAC+AGG | 0.213785 | 4.1:-8666411 | MS.gene70240:intron |
| TGGCCCAACAACTTTGTTTC+AGG | 0.217721 | 4.1:-8665317 | MS.gene70240:intron |
| GTTTGACATTGACTCGTTAA+AGG | 0.223882 | 4.1:-8667509 | MS.gene70240:CDS |
| ACACTTTATGTGCTGAATAA+TGG | 0.232404 | 4.1:+8667205 | None:intergenic |
| AATTAATATTGGTAATGTTT+TGG | 0.234892 | 4.1:-8669470 | MS.gene70240:CDS |
| CCAAGCTTTCTACTTTAAAA+AGG | 0.242882 | 4.1:-8664206 | MS.gene70240:intron |
| TTCTTCAGCACCTTGATCTT+TGG | 0.259197 | 4.1:+8666428 | None:intergenic |
| AGTGAGCATCAAGCAGTTTC+TGG | 0.262583 | 4.1:-8668278 | MS.gene70240:CDS |
| GCAGGGACCTTGACTTTATC+AGG | 0.265053 | 4.1:-8664010 | MS.gene70240:CDS |
| TACCTTCTTCTTTGGCGTTC+CGG | 0.271035 | 4.1:+8672495 | None:intergenic |
| GCATTATAGGATTTCCTTCC+AGG | 0.277596 | 4.1:+8663719 | None:intergenic |
| GGAAACTGTTGAAAATATTA+TGG | 0.291437 | 4.1:-8667159 | MS.gene70240:CDS |
| AAATGTCAACTTGGGCTTGC+TGG | 0.292500 | 4.1:-8662303 | MS.gene70240:CDS |
| AGGGCAGAAGCTGCTGCTTC+TGG | 0.296208 | 4.1:-8661954 | MS.gene70240:CDS |
| GATAGCCTTTGCCAGCTTGC+AGG | 0.297613 | 4.1:-8664028 | MS.gene70240:CDS |
| GGACACAATCACCCTGTAAC+TGG | 0.299379 | 4.1:-8664252 | MS.gene70240:CDS |
| GAACAAACCTCAAGCATTAT+AGG | 0.300868 | 4.1:+8663706 | None:intergenic |
| CACTTTATGTGCTGAATAAT+GGG | 0.305515 | 4.1:+8667206 | None:intergenic |
| TTTGATCTATAAGTTGTCTT+TGG | 0.307239 | 4.1:+8668464 | None:intergenic |
| ACCACAGCATTCCCAGTTAC+AGG | 0.313274 | 4.1:+8664240 | None:intergenic |
| CAATTTAGGGAATGTGTATA+TGG | 0.313585 | 4.1:-8671823 | MS.gene70240:CDS |
| CACATAATTGAGGCTCTTGC+AGG | 0.330311 | 4.1:-8662273 | MS.gene70240:intron |
| TAGGATTTCCTTCCAGGTTC+AGG | 0.332150 | 4.1:+8663725 | None:intergenic |
| ACGGTGGTTACCTTCTTCTT+TGG | 0.332835 | 4.1:+8672487 | None:intergenic |
| ATGGTTGAAGCTTTCATTGA+TGG | 0.336748 | 4.1:-8667119 | MS.gene70240:intron |
| CCTGACTCCTGAAGATGAAT+TGG | 0.341764 | 4.1:-8668438 | MS.gene70240:CDS |
| GATATATTGCATGTCGGATT+GGG | 0.345438 | 4.1:-8667579 | MS.gene70240:CDS |
| GTAGGTTACATCACAATTTA+GGG | 0.345533 | 4.1:-8671836 | MS.gene70240:CDS |
| AATCAGTCCTAGTAAAATTC+AGG | 0.346057 | 4.1:-8668044 | MS.gene70240:intron |
| GACATCTCTCACAATTGTTT+AGG | 0.350263 | 4.1:-8666160 | MS.gene70240:intron |
| TGAATTTCTTTGACATGAAC+TGG | 0.352727 | 4.1:+8661914 | None:intergenic |
| GTACTTTCACACCTTTGTAT+AGG | 0.354070 | 4.1:-8664350 | MS.gene70240:intron |
| ACAATGCTGTCTCAAAGTTT+TGG | 0.361105 | 4.1:-8662334 | MS.gene70240:CDS |
| CCAATTCATCTTCAGGAGTC+AGG | 0.361308 | 4.1:+8668438 | None:intergenic |
| ATCTTGGGGAAGTGCATTAC+CGG | 0.361904 | 4.1:-8671701 | MS.gene70240:CDS |
| TCATCATCCAATTCATCTTC+AGG | 0.367415 | 4.1:+8668431 | None:intergenic |
| GCCCAAGTTGACATTTCTTA+AGG | 0.370537 | 4.1:+8662310 | None:intergenic |
| AGAAGCGTGTGATGCATATA+AGG | 0.372974 | 4.1:-8669428 | MS.gene70240:CDS |
| TGGCAGGTTCTCCCGGAGTA+TGG | 0.373131 | 4.1:-8667945 | MS.gene70240:intron |
| GCTAAAGGGTATATTAATCT+TGG | 0.373279 | 4.1:-8671717 | MS.gene70240:CDS |
| CTAAAGGGTATATTAATCTT+GGG | 0.376172 | 4.1:-8671716 | MS.gene70240:CDS |
| AGTATCTGCTGCAGGAAAAC+GGG | 0.377233 | 4.1:-8671461 | MS.gene70240:CDS |
| GATTTGCATTGTAATCGATT+TGG | 0.378583 | 4.1:-8665337 | MS.gene70240:CDS |
| GCACTGGTGAAAATTAATAT+TGG | 0.384243 | 4.1:-8669481 | MS.gene70240:CDS |
| ATAGTGAAGATAATCAAGTT+AGG | 0.388166 | 4.1:-8661974 | MS.gene70240:CDS |
| TAACATTGGTATGCTTGAAA+TGG | 0.390187 | 4.1:-8671952 | MS.gene70240:CDS |
| AACGTACTTGTATCATAATT+AGG | 0.390793 | 4.1:+8668158 | None:intergenic |
| TTGTCAGACTTCTGGGTGAC+TGG | 0.394961 | 4.1:+8668309 | None:intergenic |
| TTGCCCAACGCGCTTCTTCA+CGG | 0.397193 | 4.1:+8672468 | None:intergenic |
| AAGTATCTGCTGCAGGAAAA+CGG | 0.399328 | 4.1:-8671462 | MS.gene70240:CDS |
| TGGTGTACAGCTTTCTGCCT+TGG | 0.400503 | 4.1:-8668837 | MS.gene70240:CDS |
| GCTGTTGAAGCAGACCTTCC+TGG | 0.402121 | 4.1:-8668857 | MS.gene70240:CDS |
| TTTAGAGGATGAGGATGCTT+TGG | 0.402342 | 4.1:-8671619 | MS.gene70240:CDS |
| TGGAAAATGTACAAAACAAT+TGG | 0.406577 | 4.1:-8670105 | MS.gene70240:CDS |
| TTATGAGAAGGCGCTTGGTT+TGG | 0.408365 | 4.1:-8671649 | MS.gene70240:CDS |
| TAGTATCAAGTTTCTGCTCC+TGG | 0.409281 | 4.1:+8662066 | None:intergenic |
| TGGTTTGGCGAAGTCTTTAG+AGG | 0.410254 | 4.1:-8671634 | MS.gene70240:CDS |
| TTTGGGATGGCAGGTTCTCC+CGG | 0.414807 | 4.1:-8667952 | MS.gene70240:intron |
| ATACTTGGAGGCACTGGTAT+TGG | 0.417390 | 4.1:-8663983 | MS.gene70240:CDS |
| CAAAACAATTGGCAACTTAG+AGG | 0.419791 | 4.1:-8670094 | MS.gene70240:intron |
| AGTTTCGCTGAAGTTCTTAT+CGG | 0.423030 | 4.1:-8672372 | MS.gene70240:CDS |
| TTGAAATTTGCTGAGTGAAA+TGG | 0.425143 | 4.1:+8661880 | None:intergenic |
| TAAAGAAGCAGTTAAAGTTA+TGG | 0.429094 | 4.1:-8671565 | MS.gene70240:CDS |
| TGCATCGATCAATGGTGTTA+TGG | 0.430412 | 4.1:+8666213 | None:intergenic |
| GCTCAATGACCTGGAACGTC+TGG | 0.430819 | 4.1:+8667845 | None:intergenic |
| AATCGGCGAAATCTGCTTAC+CGG | 0.431632 | 4.1:-8672514 | MS.gene70240:CDS |
| AGATATATTGCATGTCGGAT+TGG | 0.434560 | 4.1:-8667580 | MS.gene70240:CDS |
| ACTTTATCAGGACTAATACT+TGG | 0.437994 | 4.1:-8663998 | MS.gene70240:CDS |
| TTAGAACCACTAGGAAAGTA+AGG | 0.438324 | 4.1:+8667804 | None:intergenic |
| CCACCGTGAAGAAGCGCGTT+GGG | 0.439179 | 4.1:-8672471 | MS.gene70240:CDS |
| TAACAGAACCATTGCTCAAA+GGG | 0.439323 | 4.1:-8663843 | MS.gene70240:CDS |
| AACGAAGACTTATTATTTGG+CGG | 0.444910 | 4.1:+8672002 | None:intergenic |
| TTCCATCACTGACCTGAACC+TGG | 0.445947 | 4.1:-8663737 | MS.gene70240:CDS |
| TATACCTGAAACAAAGTTGT+TGG | 0.451537 | 4.1:+8665313 | None:intergenic |
| GATGATTGTATGTCAAATAG+TGG | 0.453901 | 4.1:-8668506 | MS.gene70240:CDS |
| ATTGCTGATGCATTGGACTC+TGG | 0.454023 | 4.1:-8664377 | MS.gene70240:CDS |
| ATGGTGTTATGGACAAATCT+TGG | 0.456050 | 4.1:+8666224 | None:intergenic |
| CAAGCTGCAGAAACACTCTA+TGG | 0.461807 | 4.1:-8661795 | MS.gene70240:CDS |
| GACTGATACATTGACATAAG+AGG | 0.463561 | 4.1:+8668401 | None:intergenic |
| GGCGAAGTCTTTAGAGGATG+AGG | 0.470864 | 4.1:-8671628 | MS.gene70240:CDS |
| CTAAAACTTCCAGACGTTCC+AGG | 0.472289 | 4.1:-8667854 | MS.gene70240:CDS |
| AAGGTTGGGTGATTCATATC+TGG | 0.474819 | 4.1:-8670193 | MS.gene70240:CDS |
| CGAAAGGTATTCACAACATC+AGG | 0.475544 | 4.1:-8665385 | MS.gene70240:CDS |
| GAAGTCAAATGAAGAGATAG+AGG | 0.478986 | 4.1:-8668576 | MS.gene70240:CDS |
| GCGAAACTTCATAATCGATT+CGG | 0.486422 | 4.1:+8672387 | None:intergenic |
| ATGACCTTTGTGACAGGCAA+AGG | 0.486707 | 4.1:-8670212 | MS.gene70240:CDS |
| AATTTGACCTATCATATTGT+GGG | 0.487595 | 4.1:-8663804 | MS.gene70240:CDS |
| AATACGTTAAAGCTCTCAAA+TGG | 0.488240 | 4.1:-8672412 | MS.gene70240:CDS |
| GAGATTAGCGAGTATGATGA+TGG | 0.489297 | 4.1:-8671864 | MS.gene70240:CDS |
| TGGCAAAGGCTATCGACAAC+CGG | 0.489738 | 4.1:+8664037 | None:intergenic |
| GTCAACCTGCTTTGTAGAGT+TGG | 0.492455 | 4.1:+8668331 | None:intergenic |
| CATTGTCAAGGGGAAGCTAA+AGG | 0.492547 | 4.1:-8671732 | MS.gene70240:CDS |
| TCAAATGGTATGAAAAGAGT+TGG | 0.494262 | 4.1:-8670125 | MS.gene70240:CDS |
| AGTATGATGATGGGCGTAGT+AGG | 0.494266 | 4.1:-8671854 | MS.gene70240:CDS |
| GAAGAAGCCTTGTGTGCTGC+TGG | 0.494813 | 4.1:-8667538 | MS.gene70240:CDS |
| ATGTTAGCCCACAATATGAT+AGG | 0.495892 | 4.1:+8663797 | None:intergenic |
| GTCCTTAAGAAATGTCAACT+TGG | 0.496426 | 4.1:-8662312 | MS.gene70240:CDS |
| GAAACTTGATACTATGAAAG+TGG | 0.497234 | 4.1:-8662057 | MS.gene70240:CDS |
| TACGACCCCTTTCAAGTCAC+AGG | 0.497390 | 4.1:-8661758 | MS.gene70240:CDS |
| GTTTCAGAGCAACAATCATC+AGG | 0.500220 | 4.1:+8668542 | None:intergenic |
| TCCTCAGTCCCTTTGAGCAA+TGG | 0.500926 | 4.1:+8663835 | None:intergenic |
| TAAAAGCTGTTCACAGAACC+AGG | 0.501606 | 4.1:-8662084 | MS.gene70240:CDS |
| TGCTGATAATTCTGTTTCAA+CGG | 0.502372 | 4.1:-8662138 | MS.gene70240:CDS |
| CAATTCATCTTCAGGAGTCA+GGG | 0.504803 | 4.1:+8668439 | None:intergenic |
| ATCTTACGGCGACTTAACTC+TGG | 0.506663 | 4.1:-8665359 | MS.gene70240:CDS |
| TTCCAGGTTCAGGTCAGTGA+TGG | 0.506946 | 4.1:+8663735 | None:intergenic |
| CATAAAATTGGACATTGTCA+AGG | 0.507240 | 4.1:-8671744 | MS.gene70240:CDS |
| ATTGTCAAGGGGAAGCTAAA+GGG | 0.508598 | 4.1:-8671731 | MS.gene70240:CDS |
| AATTAGGCAAGTCTTCTAAC+GGG | 0.512043 | 4.1:+8668174 | None:intergenic |
| ATGTACGTAGACTGCTGCAA+GGG | 0.513069 | 4.1:-8666464 | MS.gene70240:CDS |
| CGAGCGCAAGTATCTGCTGC+AGG | 0.513407 | 4.1:-8671469 | MS.gene70240:CDS |
| TGCTGAGTGAAATGGCAGTT+GGG | 0.513677 | 4.1:+8661888 | None:intergenic |
| TCTTATTATGAGAAGGCGCT+TGG | 0.514420 | 4.1:-8671654 | MS.gene70240:CDS |
| GAGATGTAGCCTCGGCTAGA+GGG | 0.515123 | 4.1:-8671500 | MS.gene70240:CDS |
| TCCTTAAGAAATGTCAACTT+GGG | 0.518872 | 4.1:-8662311 | MS.gene70240:CDS |
| CGGATTCTCTTTCAGACTAA+CGG | 0.519515 | 4.1:+8672022 | None:intergenic |
| CAAAGAGCTAGCACGCAGCT+AGG | 0.521257 | 4.1:-8672137 | MS.gene70240:CDS |
| ATACCTGAAACAAAGTTGTT+GGG | 0.522135 | 4.1:+8665314 | None:intergenic |
| ATAAAATTGGACATTGTCAA+GGG | 0.523025 | 4.1:-8671743 | MS.gene70240:CDS |
| ATGCATATAAGGAGAGCTAC+AGG | 0.523215 | 4.1:-8669417 | MS.gene70240:intron |
| AGTAGAACTCACATCATGTA+GGG | 0.524653 | 4.1:+8667722 | None:intergenic |
| AAGTAGAACTCACATCATGT+AGG | 0.524815 | 4.1:+8667721 | None:intergenic |
| GCGCGTTGGGCAAACGTCAT+CGG | 0.525249 | 4.1:-8672458 | MS.gene70240:CDS |
| TACCGGAACGCCAAAGAAGA+AGG | 0.526433 | 4.1:-8672497 | MS.gene70240:CDS |
| GGAATGTGTATATGGAATTG+AGG | 0.527177 | 4.1:-8671815 | MS.gene70240:CDS |
| TGGAGTTGTTCACATAATTG+AGG | 0.528217 | 4.1:-8662283 | MS.gene70240:CDS |
| GAAAGTAGTAGTTCTTTCAA+AGG | 0.532731 | 4.1:-8667897 | MS.gene70240:CDS |
| ATGTAGGGAATGATGCATCA+TGG | 0.533394 | 4.1:+8667737 | None:intergenic |
| ATAGCCTTTGCCAGCTTGCA+GGG | 0.534052 | 4.1:-8664027 | MS.gene70240:CDS |
| ACAACATCAGGTCAATCTTA+CGG | 0.534414 | 4.1:-8665373 | MS.gene70240:CDS |
| AAATACTTTAGACGATCAGC+TGG | 0.535628 | 4.1:-8662006 | MS.gene70240:CDS |
| AAATGCGATACAGATGTCTC+TGG | 0.536190 | 4.1:-8667783 | MS.gene70240:CDS |
| TTTATCAGATAACAGCAGCC+TGG | 0.536365 | 4.1:-8662174 | MS.gene70240:intron |
| GATGTGCCTGTGACTTGAAA+GGG | 0.536434 | 4.1:+8661752 | None:intergenic |
| CAGAAACACTCTATGGTTCG+TGG | 0.537191 | 4.1:-8661788 | MS.gene70240:CDS |
| GTCTGTGGAACCAAAGATCA+AGG | 0.538998 | 4.1:-8666438 | MS.gene70240:CDS |
| AAATTTGACCTATCATATTG+TGG | 0.539688 | 4.1:-8663805 | MS.gene70240:CDS |
| AATTCAACAAGGCAATCAAA+TGG | 0.539789 | 4.1:-8670140 | MS.gene70240:CDS |
| CCTCTTCATACTTCTGAGTC+CGG | 0.540010 | 4.1:+8671682 | None:intergenic |
| TTATCAGGACTAATACTTGG+AGG | 0.540389 | 4.1:-8663995 | MS.gene70240:CDS |
| ATTGATGCTTATAATAACAT+TGG | 0.540583 | 4.1:-8671966 | MS.gene70240:CDS |
| TAGTGAAGATAATCAAGTTA+GGG | 0.543361 | 4.1:-8661973 | MS.gene70240:CDS |
| CCACAGCATTCCCAGTTACA+GGG | 0.543787 | 4.1:+8664241 | None:intergenic |
| TCATCCTTGCTTTCTCAACA+AGG | 0.543876 | 4.1:+8671427 | None:intergenic |
| GGACTAATACTTGGAGGCAC+TGG | 0.546493 | 4.1:-8663989 | MS.gene70240:CDS |
| ATTCAGCACATAAAGTGTGC+TGG | 0.546576 | 4.1:-8667200 | MS.gene70240:CDS |
| TGATGATGAAATCATTGCAT+CGG | 0.546953 | 4.1:-8666257 | MS.gene70240:CDS |
| AAGTCAAGGTCCCTGCAAGC+TGG | 0.547103 | 4.1:+8664017 | None:intergenic |
| AGCAAGGATGATCGCTGCAT+GGG | 0.547239 | 4.1:-8671415 | MS.gene70240:CDS |
| CAGCAAGATTAAGCTCCTCC+AGG | 0.548771 | 4.1:+8662156 | None:intergenic |
| TTGCTGAGTGAAATGGCAGT+TGG | 0.550989 | 4.1:+8661887 | None:intergenic |
| AATCAAACTTTCTTACAGCA+AGG | 0.551137 | 4.1:+8661675 | None:intergenic |
| GATGGACTCAGAGCTCAAAT+CGG | 0.551160 | 4.1:-8672531 | MS.gene70240:CDS |
| CACATTTAGATCCATACTCC+GGG | 0.551397 | 4.1:+8667934 | None:intergenic |
| AGGTCCCTGCAAGCTGGCAA+AGG | 0.552004 | 4.1:+8664023 | None:intergenic |
| GGGAATGATGCATCATGGGA+TGG | 0.552972 | 4.1:+8667742 | None:intergenic |
| AGAAACATCTAGATCTAGCA+AGG | 0.555236 | 4.1:-8672184 | MS.gene70240:CDS |
| AAAGGCTCGAGTCCAAATAC+AGG | 0.557390 | 4.1:-8667879 | MS.gene70240:CDS |
| TAATTAGGCAAGTCTTCTAA+CGG | 0.558109 | 4.1:+8668173 | None:intergenic |
| TGTATATGGAATTGAGGAAG+TGG | 0.558312 | 4.1:-8671809 | MS.gene70240:CDS |
| GCACATTTAGATCCATACTC+CGG | 0.560871 | 4.1:+8667933 | None:intergenic |
| TAGCGAATGACCTTTGTGAC+AGG | 0.560949 | 4.1:-8670218 | MS.gene70240:CDS |
| AATTTCAAGTGCTATTACAA+AGG | 0.562599 | 4.1:-8661865 | MS.gene70240:CDS |
| GGAATGATGCATCATGGGAT+GGG | 0.562867 | 4.1:+8667743 | None:intergenic |
| AACGCCTTGTTGAGAAAGCA+AGG | 0.563106 | 4.1:-8671431 | MS.gene70240:CDS |
| CGATGCACTGCATTCACAGA+TGG | 0.565109 | 4.1:-8666197 | MS.gene70240:CDS |
| AGGAAATCCTATAATGCTTG+AGG | 0.565518 | 4.1:-8663713 | MS.gene70240:intron |
| GACACAATCACCCTGTAACT+GGG | 0.568974 | 4.1:-8664251 | MS.gene70240:CDS |
| TGATGTGCCTGTGACTTGAA+AGG | 0.569787 | 4.1:+8661751 | None:intergenic |
| TCATACCAACTCTACAAAGC+AGG | 0.569932 | 4.1:-8668336 | MS.gene70240:CDS |
| CTTTGTGACAGGCAAAGGTT+GGG | 0.570383 | 4.1:-8670207 | MS.gene70240:CDS |
| AATATGAGTGGTCTAAAACT+AGG | 0.571267 | 4.1:-8664064 | MS.gene70240:CDS |
| CATTATCCATTTCTCAACAA+AGG | 0.571546 | 4.1:-8661721 | MS.gene70240:CDS |
| GATGATCGCTGCATGGGAGA+AGG | 0.573409 | 4.1:-8671409 | MS.gene70240:intron |
| TGCAGAGATATATTGCATGT+CGG | 0.573604 | 4.1:-8667585 | MS.gene70240:intron |
| CGCTATGAAGAATATGAAGA+GGG | 0.574039 | 4.1:-8671781 | MS.gene70240:CDS |
| CCTTTGTGACAGGCAAAGGT+TGG | 0.574193 | 4.1:-8670208 | MS.gene70240:CDS |
| AGAGATGTAGCCTCGGCTAG+AGG | 0.577083 | 4.1:-8671501 | MS.gene70240:CDS |
| AAGCAAGGATGATCGCTGCA+TGG | 0.577140 | 4.1:-8671416 | MS.gene70240:CDS |
| GTCACAACTTGTCAATCCCT+CGG | 0.578288 | 4.1:-8672338 | MS.gene70240:CDS |
| ACGCTATGAAGAATATGAAG+AGG | 0.578906 | 4.1:-8671782 | MS.gene70240:CDS |
| TGGAGGAGATCTAGAATCGC+TGG | 0.579552 | 4.1:-8667180 | MS.gene70240:CDS |
| CTGATCACCAGCAGCACACA+AGG | 0.580672 | 4.1:+8667531 | None:intergenic |
| GTAACAGAACCATTGCTCAA+AGG | 0.583157 | 4.1:-8663844 | MS.gene70240:CDS |
| GCTGAACCTTACTTTCCTAG+TGG | 0.585760 | 4.1:-8667810 | MS.gene70240:CDS |
| AGTGGAATGCTCAAGCAGAA+AGG | 0.588930 | 4.1:-8668207 | MS.gene70240:CDS |
| ATCACTGACCTGAACCTGGA+AGG | 0.591981 | 4.1:-8663733 | MS.gene70240:CDS |
| ACCACCGTGAAGAAGCGCGT+TGG | 0.592374 | 4.1:-8672472 | MS.gene70240:CDS |
| TATATCGTTGCTCAATGACC+TGG | 0.592451 | 4.1:+8667836 | None:intergenic |
| TCAATGTATCAGTCTATCAA+AGG | 0.595400 | 4.1:-8668392 | MS.gene70240:CDS |
| TGGTCTAAAACTAGGCAGAC+CGG | 0.596349 | 4.1:-8664056 | MS.gene70240:CDS |
| TAAAGGGTATATTAATCTTG+GGG | 0.597879 | 4.1:-8671715 | MS.gene70240:CDS |
| CCAGCAGAAAAGAAATCAGA+GGG | 0.601683 | 4.1:-8667454 | MS.gene70240:intron |
| CTGCTGCAAGGGGTTGTCTG+TGG | 0.604385 | 4.1:-8666453 | MS.gene70240:CDS |
| CCAACCTTTGCCTGTCACAA+AGG | 0.604669 | 4.1:+8670208 | None:intergenic |
| ATTGTGAATTTGCGAAGGAG+AGG | 0.604841 | 4.1:-8670248 | MS.gene70240:CDS |
| AGATTAGCGAGTATGATGAT+GGG | 0.605604 | 4.1:-8671863 | MS.gene70240:CDS |
| ATTGAAGATTTGCGACGAAG+AGG | 0.606184 | 4.1:-8671886 | MS.gene70240:CDS |
| ACGGAGATAGATTTCACCGA+GGG | 0.606325 | 4.1:+8672322 | None:intergenic |
| CATGATCAGATTTGATGACG+AGG | 0.606387 | 4.1:-8668795 | MS.gene70240:CDS |
| TGTAGGGAATGATGCATCAT+GGG | 0.607187 | 4.1:+8667738 | None:intergenic |
| ACTCAAGAGAGATGTAGCCT+CGG | 0.607299 | 4.1:-8671508 | MS.gene70240:CDS |
| ATGATTGTATGTCAAATAGT+GGG | 0.608032 | 4.1:-8668505 | MS.gene70240:CDS |
| GGTGATTCATATCTGGATGT+CGG | 0.608044 | 4.1:-8670186 | MS.gene70240:CDS |
| GGCGCGGTCTTATTATGAGA+AGG | 0.609532 | 4.1:-8671661 | MS.gene70240:CDS |
| GAATGCAGTGCATCGATCAA+TGG | 0.610466 | 4.1:+8666205 | None:intergenic |
| TTGCTTATAGGGGCAAGCAC+TGG | 0.613554 | 4.1:-8669497 | MS.gene70240:intron |
| GTGTTATGGACAAATCTTGG+AGG | 0.614059 | 4.1:+8666227 | None:intergenic |
| AAGGCAGAAAGCTGTACACC+AGG | 0.614490 | 4.1:+8668839 | None:intergenic |
| ATCCACATGCATCAGTAAGA+CGG | 0.616095 | 4.1:+8664744 | None:intergenic |
| GTGCAGTGTCCCTCTAGCCG+AGG | 0.623267 | 4.1:+8671491 | None:intergenic |
| TCAGTATTGTGAATTTGCGA+AGG | 0.626543 | 4.1:-8670253 | MS.gene70240:intron |
| GAAAGTGGATGATAATCAAG+AGG | 0.626899 | 4.1:-8662042 | MS.gene70240:CDS |
| ATATATTGCATGTCGGATTG+GGG | 0.628585 | 4.1:-8667578 | MS.gene70240:CDS |
| TCCAGCAGAAAAGAAATCAG+AGG | 0.629533 | 4.1:-8667455 | MS.gene70240:CDS |
| TGATGACGAGGATGATGAAG+TGG | 0.635870 | 4.1:-8668225 | MS.gene70240:CDS |
| CATCGGAAAATTGCTCAAGA+CGG | 0.637389 | 4.1:+8672303 | None:intergenic |
| ATCAGATAACAGCAGCCTGG+AGG | 0.641615 | 4.1:-8662171 | MS.gene70240:intron |
| TATTAGTCCTGATAAAGTCA+AGG | 0.643837 | 4.1:+8664003 | None:intergenic |
| AATGTACGTAGACTGCTGCA+AGG | 0.644632 | 4.1:-8666465 | MS.gene70240:CDS |
| CATCATCAGAAAGAATTACA+CGG | 0.645079 | 4.1:+8668243 | None:intergenic |
| CAGAAAGCTGTACACCAGGA+AGG | 0.647923 | 4.1:+8668843 | None:intergenic |
| ACGAGGCGGCGAATATACTC+AGG | 0.648542 | 4.1:-8671914 | MS.gene70240:CDS |
| CAGCACATAAAGTGTGCTGG+AGG | 0.648707 | 4.1:-8667197 | MS.gene70240:CDS |
| GTATCTGCTGCAGGAAAACG+GGG | 0.648754 | 4.1:-8671460 | MS.gene70240:CDS |
| GGAGCATCTGCAAAATAACA+TGG | 0.649768 | 4.1:-8667138 | MS.gene70240:CDS |
| GACAATGGAGAAACTTCGAA+AGG | 0.650768 | 4.1:-8665401 | MS.gene70240:CDS |
| ACCATTGCTCAAAGGGACTG+AGG | 0.651690 | 4.1:-8663836 | MS.gene70240:CDS |
| TTGATGACGAGGATGAGACC+AGG | 0.652930 | 4.1:-8668784 | MS.gene70240:intron |
| CCGGACTCAGAAGTATGAAG+AGG | 0.653448 | 4.1:-8671682 | MS.gene70240:CDS |
| GAAACATCTAGATCTAGCAA+GGG | 0.658489 | 4.1:-8672183 | MS.gene70240:CDS |
| GCTTGATAACTTGCACGAGG+CGG | 0.661398 | 4.1:-8671928 | MS.gene70240:CDS |
| CTCAGAAGTATGAAGAGGCG+CGG | 0.664193 | 4.1:-8671677 | MS.gene70240:CDS |
| CCCTGTAACTGGGAATGCTG+TGG | 0.664904 | 4.1:-8664241 | MS.gene70240:CDS |
| TAAAATTGGACATTGTCAAG+GGG | 0.672258 | 4.1:-8671742 | MS.gene70240:CDS |
| AACCGTCTTACTGATGCATG+TGG | 0.676038 | 4.1:-8664746 | MS.gene70240:CDS |
| GCGGCGAATATACTCAGGAG+AGG | 0.676855 | 4.1:-8671909 | MS.gene70240:CDS |
| GATTTATCGTACCTATACAA+AGG | 0.678847 | 4.1:+8664339 | None:intergenic |
| TGTACGTAGACTGCTGCAAG+GGG | 0.679759 | 4.1:-8666463 | MS.gene70240:CDS |
| CCCAACGCGCTTCTTCACGG+TGG | 0.680138 | 4.1:+8672471 | None:intergenic |
| GTATCGCATTTAGAACCACT+AGG | 0.698771 | 4.1:+8667795 | None:intergenic |
| ATGTGCCTGTGACTTGAAAG+GGG | 0.702623 | 4.1:+8661753 | None:intergenic |
| AATTCTTTCTGATGATGACG+AGG | 0.714829 | 4.1:-8668237 | MS.gene70240:CDS |
| GGCGATATACTCAAGAACAG+AGG | 0.723753 | 4.1:-8672437 | MS.gene70240:CDS |
| GACGGAGATAGATTTCACCG+AGG | 0.730813 | 4.1:+8672321 | None:intergenic |
| GGAGCTTGATAACTTGCACG+AGG | 0.747640 | 4.1:-8671931 | MS.gene70240:CDS |
| GAAGCTCAGAAAATTCAACA+AGG | 0.757883 | 4.1:-8670151 | MS.gene70240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 8661677 | 8672552 | 8661677 | ID=MS.gene70240 |
| chr4.1 | mRNA | 8661677 | 8672552 | 8661677 | ID=MS.gene70240.t1;Parent=MS.gene70240 |
| chr4.1 | exon | 8672289 | 8672552 | 8672289 | ID=MS.gene70240.t1.exon1;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8672289 | 8672552 | 8672289 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8671410 | 8672207 | 8671410 | ID=MS.gene70240.t1.exon2;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8671410 | 8672207 | 8671410 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8670095 | 8670271 | 8670095 | ID=MS.gene70240.t1.exon3;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8670095 | 8670271 | 8670095 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8669418 | 8669509 | 8669418 | ID=MS.gene70240.t1.exon4;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8669418 | 8669509 | 8669418 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8668785 | 8668883 | 8668785 | ID=MS.gene70240.t1.exon5;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8668785 | 8668883 | 8668785 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8668165 | 8668628 | 8668165 | ID=MS.gene70240.t1.exon6;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8668165 | 8668628 | 8668165 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8668045 | 8668076 | 8668045 | ID=MS.gene70240.t1.exon7;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8668045 | 8668076 | 8668045 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8667734 | 8667961 | 8667734 | ID=MS.gene70240.t1.exon8;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8667734 | 8667961 | 8667734 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8667455 | 8667602 | 8667455 | ID=MS.gene70240.t1.exon9;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8667455 | 8667602 | 8667455 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8667120 | 8667236 | 8667120 | ID=MS.gene70240.t1.exon10;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8667120 | 8667236 | 8667120 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8666412 | 8666512 | 8666412 | ID=MS.gene70240.t1.exon11;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8666412 | 8666512 | 8666412 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8666161 | 8666284 | 8666161 | ID=MS.gene70240.t1.exon12;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8666161 | 8666284 | 8666161 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8665318 | 8665430 | 8665318 | ID=MS.gene70240.t1.exon13;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8665318 | 8665430 | 8665318 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8664711 | 8664822 | 8664711 | ID=MS.gene70240.t1.exon14;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8664711 | 8664822 | 8664711 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8664351 | 8664455 | 8664351 | ID=MS.gene70240.t1.exon15;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8664351 | 8664455 | 8664351 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8664207 | 8664273 | 8664207 | ID=MS.gene70240.t1.exon16;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8664207 | 8664273 | 8664207 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8663979 | 8664099 | 8663979 | ID=MS.gene70240.t1.exon17;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8663979 | 8664099 | 8663979 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8663714 | 8663881 | 8663714 | ID=MS.gene70240.t1.exon18;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8663714 | 8663881 | 8663714 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8662274 | 8662391 | 8662274 | ID=MS.gene70240.t1.exon19;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8662274 | 8662391 | 8662274 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| chr4.1 | exon | 8661677 | 8662188 | 8661677 | ID=MS.gene70240.t1.exon20;Parent=MS.gene70240.t1 |
| chr4.1 | CDS | 8661677 | 8662188 | 8661677 | ID=cds.MS.gene70240.t1;Parent=MS.gene70240.t1 |
| Gene Sequence |
| Protein sequence |
