Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70503.t1 | KEH35193.1 | 92.2 | 218 | 14 | 3 | 1 | 217 | 1 | 216 | 1.30E-89 | 339.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70503.t1 | Q9LIE6 | 51.2 | 86 | 42 | 0 | 53 | 138 | 41 | 126 | 7.5e-14 | 79.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70503.t1 | A0A072V1D6 | 92.2 | 218 | 14 | 3 | 1 | 217 | 1 | 216 | 9.2e-90 | 339.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049281 | MS.gene70503 | 0.801624 | 8.25E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene70503 | -0.803065 | 4.16E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene70503 | 0.802626 | 5.13E-49 | -1.69E-46 |
| MS.gene049483 | MS.gene70503 | 0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene050363 | MS.gene70503 | 0.886273 | 3.95E-72 | -1.69E-46 |
| MS.gene050381 | MS.gene70503 | 0.848625 | 5.44E-60 | -1.69E-46 |
| MS.gene050416 | MS.gene70503 | 0.817942 | 2.54E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene70503 | -0.815987 | 6.98E-52 | -1.69E-46 |
| MS.gene05141 | MS.gene70503 | 0.800513 | 1.39E-48 | -1.69E-46 |
| MS.gene051564 | MS.gene70503 | -0.807824 | 4.19E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene70503 | 0.815066 | 1.12E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene70503 | -0.815879 | 7.37E-52 | -1.69E-46 |
| MS.gene052670 | MS.gene70503 | -0.81467 | 1.37E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene70503 | 0.82994 | 3.89E-55 | -1.69E-46 |
| MS.gene054616 | MS.gene70503 | 0.846158 | 2.59E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene70503 | -0.80142 | 9.08E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene70503 | 0.813357 | 2.67E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene70503 | -0.800777 | 1.23E-48 | -1.69E-46 |
| MS.gene055154 | MS.gene70503 | 0.805184 | 1.51E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene70503 | -0.804346 | 2.26E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene70503 | -0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene056310 | MS.gene70503 | 0.814085 | 1.84E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene70503 | 0.81026 | 1.26E-50 | -1.69E-46 |
| MS.gene056313 | MS.gene70503 | 0.817558 | 3.10E-52 | -1.69E-46 |
| MS.gene056408 | MS.gene70503 | 0.889999 | 1.46E-73 | -1.69E-46 |
| MS.gene056550 | MS.gene70503 | 0.801641 | 8.18E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene70503 | 0.810945 | 8.96E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene70503 | -0.802472 | 5.52E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene70503 | -0.823915 | 1.07E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene70503 | -0.813783 | 2.15E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene70503 | -0.801923 | 7.16E-49 | -1.69E-46 |
| MS.gene06012 | MS.gene70503 | 0.808076 | 3.70E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene70503 | -0.813767 | 2.17E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene70503 | -0.802642 | 5.09E-49 | -1.69E-46 |
| MS.gene060808 | MS.gene70503 | 0.80985 | 1.54E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70503.t1 | MTR_3g081500 | 96.330 | 218 | 5 | 3 | 1 | 217 | 1 | 216 | 2.06e-147 | 409 |
| MS.gene70503.t1 | MTR_2g035850 | 46.392 | 97 | 46 | 3 | 9 | 99 | 13 | 109 | 6.82e-18 | 79.7 |
| MS.gene70503.t1 | MTR_4g094698 | 42.202 | 109 | 49 | 5 | 7 | 112 | 10 | 107 | 6.54e-14 | 67.4 |
| MS.gene70503.t1 | MTR_5g063310 | 62.791 | 43 | 16 | 0 | 67 | 109 | 155 | 197 | 2.41e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70503.t1 | AT4G39720 | 31.383 | 188 | 116 | 5 | 9 | 191 | 56 | 235 | 9.28e-13 | 66.2 |
| MS.gene70503.t1 | AT4G39720 | 31.383 | 188 | 116 | 5 | 9 | 191 | 56 | 235 | 9.89e-13 | 66.2 |
| MS.gene70503.t1 | AT4G39720 | 31.383 | 188 | 116 | 5 | 9 | 191 | 56 | 235 | 1.09e-12 | 65.9 |
| MS.gene70503.t1 | AT4G39720 | 31.383 | 188 | 116 | 5 | 9 | 191 | 56 | 235 | 1.09e-12 | 65.9 |
| MS.gene70503.t1 | AT3G22160 | 71.667 | 60 | 16 | 1 | 53 | 111 | 41 | 100 | 1.65e-12 | 64.3 |
| MS.gene70503.t1 | AT1G35830 | 62.222 | 45 | 17 | 0 | 67 | 111 | 100 | 144 | 2.13e-11 | 62.4 |
| MS.gene70503.t1 | AT4G15120 | 80.851 | 47 | 9 | 0 | 55 | 101 | 39 | 85 | 4.56e-11 | 60.1 |
| MS.gene70503.t1 | AT5G65170 | 62.791 | 43 | 16 | 0 | 67 | 109 | 140 | 182 | 5.18e-11 | 61.6 |
Find 66 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTCATCATGGTTGATTC+AGG | 0.196823 | 3.1:+67054308 | None:intergenic |
| GTGTAAGGAGGGGTTTGATT+AGG | 0.284979 | 3.1:+67054371 | None:intergenic |
| CTGGCTGAGGTTGGTGAGCT+TGG | 0.290535 | 3.1:+67054287 | None:intergenic |
| TGTAAGGAGGGGTTTGATTA+GGG | 0.309491 | 3.1:+67054372 | None:intergenic |
| TTATCATTGTTTGAAGGTCT+TGG | 0.328276 | 3.1:+67053870 | None:intergenic |
| ACCCTAGCAGGCCTAGGGCT+TGG | 0.349369 | 3.1:-67054074 | MS.gene70503:CDS |
| TTCAGATGGACCCAAGTTGC+TGG | 0.349830 | 3.1:+67054268 | None:intergenic |
| CCTGCTAGGGTTGAGAAATT+AGG | 0.351690 | 3.1:+67054086 | None:intergenic |
| AGGCCTAGGGCTTGGCCCAC+GGG | 0.363073 | 3.1:-67054066 | MS.gene70503:CDS |
| TCTCAAGAAGAAGAAGTTCT+TGG | 0.369824 | 3.1:+67053789 | None:intergenic |
| GTTGTTAGTGATCATATTCA+TGG | 0.373249 | 3.1:-67053831 | MS.gene70503:CDS |
| CAGGCCTAGGGCTTGGCCCA+CGG | 0.392030 | 3.1:-67054067 | MS.gene70503:CDS |
| GCTGCTGCAAAAGGTGCAAT+AGG | 0.418378 | 3.1:+67054128 | None:intergenic |
| GACATCATAGATTGATTCAT+AGG | 0.420321 | 3.1:+67054035 | None:intergenic |
| GATTCATCATGGTTGATTCA+GGG | 0.429834 | 3.1:+67054309 | None:intergenic |
| GTTGTTGTTGAAGCTGTTGT+TGG | 0.432601 | 3.1:+67054000 | None:intergenic |
| AGCCCTTGATCTTCTTCGTA+TGG | 0.433702 | 3.1:+67054229 | None:intergenic |
| TTCTCAACCCTAGCAGGCCT+AGG | 0.444711 | 3.1:-67054080 | MS.gene70503:CDS |
| GGCCAAGCCCTAGGCCTGCT+AGG | 0.451902 | 3.1:+67054072 | None:intergenic |
| AAGCCCGTGGGCCAAGCCCT+AGG | 0.457915 | 3.1:+67054063 | None:intergenic |
| TTAGTAGTAATGGAAGTGTA+AGG | 0.460397 | 3.1:+67054356 | None:intergenic |
| GCCCTTGATCTTCTTCGTAT+GGG | 0.464225 | 3.1:+67054230 | None:intergenic |
| TAGTAATGGAAGTGTAAGGA+GGG | 0.468900 | 3.1:+67054360 | None:intergenic |
| CCTAATTTCTCAACCCTAGC+AGG | 0.472155 | 3.1:-67054086 | MS.gene70503:CDS |
| GATGTGGCTGCTGCTGCAAA+AGG | 0.475844 | 3.1:+67054119 | None:intergenic |
| TGAAGCTGTTGTTGGTAGAA+AGG | 0.476011 | 3.1:+67054008 | None:intergenic |
| CAACACTACAATATGTATAG+TGG | 0.476494 | 3.1:-67053954 | MS.gene70503:CDS |
| ACCAACCTCAGCCAGCAACT+TGG | 0.483517 | 3.1:-67054279 | MS.gene70503:CDS |
| TTCGTATGGGCTTTGACACA+CGG | 0.492946 | 3.1:+67054243 | None:intergenic |
| TCATAGATTGATTCATAGGA+TGG | 0.502434 | 3.1:+67054039 | None:intergenic |
| GCCAAGCCCTAGGCCTGCTA+GGG | 0.502498 | 3.1:+67054073 | None:intergenic |
| AGGGGTGGTGTTAGTAGTAA+TGG | 0.506379 | 3.1:+67054346 | None:intergenic |
| TTATTATTATCATTGTTTGA+AGG | 0.509412 | 3.1:+67053864 | None:intergenic |
| CCCAAGTTGCTGGCTGAGGT+TGG | 0.527272 | 3.1:+67054278 | None:intergenic |
| CCAACCTCAGCCAGCAACTT+GGG | 0.528451 | 3.1:-67054278 | MS.gene70503:CDS |
| GAAGAAGATCAAGGGCTTCG+CGG | 0.529169 | 3.1:-67054223 | MS.gene70503:CDS |
| AGCCCATACGAAGAAGATCA+AGG | 0.531159 | 3.1:-67054232 | MS.gene70503:CDS |
| CACTACTAATTTCCGTGCCA+TGG | 0.531867 | 3.1:-67054171 | MS.gene70503:CDS |
| GTAGTAATGGAAGTGTAAGG+AGG | 0.532755 | 3.1:+67054359 | None:intergenic |
| AGCAACTTGGGTCCATCTGA+AGG | 0.541645 | 3.1:-67054266 | MS.gene70503:CDS |
| CATATTCATGGAGGAGAAGG+TGG | 0.544946 | 3.1:-67053819 | MS.gene70503:CDS |
| TCTCAACCCTAGCAGGCCTA+GGG | 0.552947 | 3.1:-67054079 | MS.gene70503:CDS |
| GATCATATTCATGGAGGAGA+AGG | 0.558000 | 3.1:-67053822 | MS.gene70503:CDS |
| AAAAGGTGCAATAGGACCTC+CGG | 0.561409 | 3.1:+67054136 | None:intergenic |
| TGGTGAGCTTGGATTCATCA+TGG | 0.561975 | 3.1:+67054298 | None:intergenic |
| TGGACCCAAGTTGCTGGCTG+AGG | 0.570124 | 3.1:+67054274 | None:intergenic |
| TTTGACACACGGCCTTCAGA+TGG | 0.574107 | 3.1:+67054254 | None:intergenic |
| AGTAATGGAAGTGTAAGGAG+GGG | 0.590782 | 3.1:+67054361 | None:intergenic |
| CATAGATTGATTCATAGGAT+GGG | 0.593968 | 3.1:+67054040 | None:intergenic |
| GGGTAAAGTTGAAGCAGGGG+TGG | 0.597668 | 3.1:+67054331 | None:intergenic |
| GCCCATACGAAGAAGATCAA+GGG | 0.605404 | 3.1:-67054231 | MS.gene70503:CDS |
| GCCATGGTACAACAATTCAC+CGG | 0.607187 | 3.1:-67054155 | MS.gene70503:CDS |
| TTCATCATGGTTGATTCAGG+GGG | 0.612844 | 3.1:+67054311 | None:intergenic |
| ATTCATCATGGTTGATTCAG+GGG | 0.614825 | 3.1:+67054310 | None:intergenic |
| TGAATTGTTGTACCATGGCA+CGG | 0.621886 | 3.1:+67054159 | None:intergenic |
| TCCGGTGAATTGTTGTACCA+TGG | 0.630340 | 3.1:+67054154 | None:intergenic |
| GCCGACGACTTTACTTAACA+CGG | 0.631878 | 3.1:-67054195 | MS.gene70503:CDS |
| TTCATAGGATGGGAAGCCCG+TGG | 0.633148 | 3.1:+67054050 | None:intergenic |
| AACGTTAATACACAAGTAGG+AGG | 0.633926 | 3.1:-67053930 | MS.gene70503:CDS |
| TCATAGGATGGGAAGCCCGT+GGG | 0.636209 | 3.1:+67054051 | None:intergenic |
| GGCAACGTTAATACACAAGT+AGG | 0.638298 | 3.1:-67053933 | MS.gene70503:CDS |
| ATTAGGTGGTGATGATGATG+TGG | 0.666182 | 3.1:+67054103 | None:intergenic |
| GCTAGGGTTGAGAAATTAGG+TGG | 0.673876 | 3.1:+67054089 | None:intergenic |
| GTTAGTGATCATATTCATGG+AGG | 0.678249 | 3.1:-67053828 | MS.gene70503:CDS |
| TCCGTGTTAAGTAAAGTCGT+CGG | 0.679295 | 3.1:+67054194 | None:intergenic |
| ATGGTACAACAATTCACCGG+AGG | 0.714463 | 3.1:-67054152 | MS.gene70503:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTATCATTGTTTGA+AGG | + | chr3.1:67054352-67054371 | None:intergenic | 15.0% |
| !! | TAGAATTGAAAAAACTCATT+TGG | + | chr3.1:67053809-67053828 | None:intergenic | 20.0% |
| ! | AATTGAAAAAACTCATTTGG+TGG | + | chr3.1:67053806-67053825 | None:intergenic | 25.0% |
| ! | ATTGAAAAAACTCATTTGGT+GGG | + | chr3.1:67053805-67053824 | None:intergenic | 25.0% |
| CAACACTACAATATGTATAG+TGG | - | chr3.1:67054259-67054278 | MS.gene70503:CDS | 30.0% | |
| GTTGTTAGTGATCATATTCA+TGG | - | chr3.1:67054382-67054401 | MS.gene70503:CDS | 30.0% | |
| TTATCATTGTTTGAAGGTCT+TGG | + | chr3.1:67054346-67054365 | None:intergenic | 30.0% | |
| ! | CATAGATTGATTCATAGGAT+GGG | + | chr3.1:67054176-67054195 | None:intergenic | 30.0% |
| ! | GACATCATAGATTGATTCAT+AGG | + | chr3.1:67054181-67054200 | None:intergenic | 30.0% |
| ! | TCATAGATTGATTCATAGGA+TGG | + | chr3.1:67054177-67054196 | None:intergenic | 30.0% |
| ! | TTAGTAGTAATGGAAGTGTA+AGG | + | chr3.1:67053860-67053879 | None:intergenic | 30.0% |
| ! | TTGAAAAAACTCATTTGGTG+GGG | + | chr3.1:67053804-67053823 | None:intergenic | 30.0% |
| AACGTTAATACACAAGTAGG+AGG | - | chr3.1:67054283-67054302 | MS.gene70503:CDS | 35.0% | |
| GTTAGTGATCATATTCATGG+AGG | - | chr3.1:67054385-67054404 | MS.gene70503:CDS | 35.0% | |
| ! | ATTCATCATGGTTGATTCAG+GGG | + | chr3.1:67053906-67053925 | None:intergenic | 35.0% |
| ! | GATTCATCATGGTTGATTCA+GGG | + | chr3.1:67053907-67053926 | None:intergenic | 35.0% |
| ! | TAGTAATGGAAGTGTAAGGA+GGG | + | chr3.1:67053856-67053875 | None:intergenic | 35.0% |
| ! | TGAAAAAACTCATTTGGTGG+GGG | + | chr3.1:67053803-67053822 | None:intergenic | 35.0% |
| GATCATATTCATGGAGGAGA+AGG | - | chr3.1:67054391-67054410 | MS.gene70503:CDS | 40.0% | |
| GGCAACGTTAATACACAAGT+AGG | - | chr3.1:67054280-67054299 | MS.gene70503:CDS | 40.0% | |
| TCCGTGTTAAGTAAAGTCGT+CGG | + | chr3.1:67054022-67054041 | None:intergenic | 40.0% | |
| TGAATTGTTGTACCATGGCA+CGG | + | chr3.1:67054057-67054076 | None:intergenic | 40.0% | |
| TGTAAGGAGGGGTTTGATTA+GGG | + | chr3.1:67053844-67053863 | None:intergenic | 40.0% | |
| ! | AGTAATGGAAGTGTAAGGAG+GGG | + | chr3.1:67053855-67053874 | None:intergenic | 40.0% |
| ! | ATTAGGTGGTGATGATGATG+TGG | + | chr3.1:67054113-67054132 | None:intergenic | 40.0% |
| ! | GGATTCATCATGGTTGATTC+AGG | + | chr3.1:67053908-67053927 | None:intergenic | 40.0% |
| ! | GTAGTAATGGAAGTGTAAGG+AGG | + | chr3.1:67053857-67053876 | None:intergenic | 40.0% |
| ! | GTTGTTGTTGAAGCTGTTGT+TGG | + | chr3.1:67054216-67054235 | None:intergenic | 40.0% |
| ! | TGAAGCTGTTGTTGGTAGAA+AGG | + | chr3.1:67054208-67054227 | None:intergenic | 40.0% |
| ! | TTCATCATGGTTGATTCAGG+GGG | + | chr3.1:67053905-67053924 | None:intergenic | 40.0% |
| AGCCCATACGAAGAAGATCA+AGG | - | chr3.1:67053981-67054000 | MS.gene70503:CDS | 45.0% | |
| AGCCCTTGATCTTCTTCGTA+TGG | + | chr3.1:67053987-67054006 | None:intergenic | 45.0% | |
| ATGGTACAACAATTCACCGG+AGG | - | chr3.1:67054061-67054080 | MS.gene70503:CDS | 45.0% | |
| CACTACTAATTTCCGTGCCA+TGG | - | chr3.1:67054042-67054061 | MS.gene70503:CDS | 45.0% | |
| CATATTCATGGAGGAGAAGG+TGG | - | chr3.1:67054394-67054413 | MS.gene70503:CDS | 45.0% | |
| CCTAATTTCTCAACCCTAGC+AGG | - | chr3.1:67054127-67054146 | MS.gene70503:CDS | 45.0% | |
| CCTGCTAGGGTTGAGAAATT+AGG | + | chr3.1:67054130-67054149 | None:intergenic | 45.0% | |
| GCCATGGTACAACAATTCAC+CGG | - | chr3.1:67054058-67054077 | MS.gene70503:CDS | 45.0% | |
| GCCCATACGAAGAAGATCAA+GGG | - | chr3.1:67053982-67054001 | MS.gene70503:CDS | 45.0% | |
| GCCCTTGATCTTCTTCGTAT+GGG | + | chr3.1:67053986-67054005 | None:intergenic | 45.0% | |
| GCCGACGACTTTACTTAACA+CGG | - | chr3.1:67054018-67054037 | MS.gene70503:CDS | 45.0% | |
| GCTAGGGTTGAGAAATTAGG+TGG | + | chr3.1:67054127-67054146 | None:intergenic | 45.0% | |
| GTGTAAGGAGGGGTTTGATT+AGG | + | chr3.1:67053845-67053864 | None:intergenic | 45.0% | |
| TCCGGTGAATTGTTGTACCA+TGG | + | chr3.1:67054062-67054081 | None:intergenic | 45.0% | |
| TGGTGAGCTTGGATTCATCA+TGG | + | chr3.1:67053918-67053937 | None:intergenic | 45.0% | |
| ! | AAAAGGTGCAATAGGACCTC+CGG | + | chr3.1:67054080-67054099 | None:intergenic | 45.0% |
| ! | AGGGGTGGTGTTAGTAGTAA+TGG | + | chr3.1:67053870-67053889 | None:intergenic | 45.0% |
| ! | TTCGTATGGGCTTTGACACA+CGG | + | chr3.1:67053973-67053992 | None:intergenic | 45.0% |
| AGCAACTTGGGTCCATCTGA+AGG | - | chr3.1:67053947-67053966 | MS.gene70503:CDS | 50.0% | |
| AGGGGGTAAAGTTGAAGCAG+GGG | + | chr3.1:67053888-67053907 | None:intergenic | 50.0% | |
| CAGGGGGTAAAGTTGAAGCA+GGG | + | chr3.1:67053889-67053908 | None:intergenic | 50.0% | |
| GAAGAAGATCAAGGGCTTCG+CGG | - | chr3.1:67053990-67054009 | MS.gene70503:CDS | 50.0% | |
| TCAGGGGGTAAAGTTGAAGC+AGG | + | chr3.1:67053890-67053909 | None:intergenic | 50.0% | |
| TTCAGATGGACCCAAGTTGC+TGG | + | chr3.1:67053948-67053967 | None:intergenic | 50.0% | |
| TTTGACACACGGCCTTCAGA+TGG | + | chr3.1:67053962-67053981 | None:intergenic | 50.0% | |
| ! | GCTGCTGCAAAAGGTGCAAT+AGG | + | chr3.1:67054088-67054107 | None:intergenic | 50.0% |
| ACCAACCTCAGCCAGCAACT+TGG | - | chr3.1:67053934-67053953 | MS.gene70503:CDS | 55.0% | |
| CCAACCTCAGCCAGCAACTT+GGG | - | chr3.1:67053935-67053954 | MS.gene70503:CDS | 55.0% | |
| GATGTGGCTGCTGCTGCAAA+AGG | + | chr3.1:67054097-67054116 | None:intergenic | 55.0% | |
| GGGTAAAGTTGAAGCAGGGG+TGG | + | chr3.1:67053885-67053904 | None:intergenic | 55.0% | |
| TCATAGGATGGGAAGCCCGT+GGG | + | chr3.1:67054165-67054184 | None:intergenic | 55.0% | |
| TCTCAACCCTAGCAGGCCTA+GGG | - | chr3.1:67054134-67054153 | MS.gene70503:CDS | 55.0% | |
| TTCATAGGATGGGAAGCCCG+TGG | + | chr3.1:67054166-67054185 | None:intergenic | 55.0% | |
| TTCTCAACCCTAGCAGGCCT+AGG | - | chr3.1:67054133-67054152 | MS.gene70503:CDS | 55.0% | |
| ! | CCCAAGTTGCTGGCTGAGGT+TGG | + | chr3.1:67053938-67053957 | None:intergenic | 60.0% |
| ! | TGGACCCAAGTTGCTGGCTG+AGG | + | chr3.1:67053942-67053961 | None:intergenic | 60.0% |
| !! | CTGGCTGAGGTTGGTGAGCT+TGG | + | chr3.1:67053929-67053948 | None:intergenic | 60.0% |
| ACCCTAGCAGGCCTAGGGCT+TGG | - | chr3.1:67054139-67054158 | MS.gene70503:CDS | 65.0% | |
| GCCAAGCCCTAGGCCTGCTA+GGG | + | chr3.1:67054143-67054162 | None:intergenic | 65.0% | |
| AAGCCCGTGGGCCAAGCCCT+AGG | + | chr3.1:67054153-67054172 | None:intergenic | 70.0% | |
| AGGCCTAGGGCTTGGCCCAC+GGG | - | chr3.1:67054147-67054166 | MS.gene70503:CDS | 70.0% | |
| CAGGCCTAGGGCTTGGCCCA+CGG | - | chr3.1:67054146-67054165 | MS.gene70503:CDS | 70.0% | |
| GGCCAAGCCCTAGGCCTGCT+AGG | + | chr3.1:67054144-67054163 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 67053791 | 67054444 | 67053791 | ID=MS.gene70503 |
| chr3.1 | mRNA | 67053791 | 67054444 | 67053791 | ID=MS.gene70503.t1;Parent=MS.gene70503 |
| chr3.1 | exon | 67053791 | 67054444 | 67053791 | ID=MS.gene70503.t1.exon1;Parent=MS.gene70503.t1 |
| chr3.1 | CDS | 67053791 | 67054444 | 67053791 | ID=cds.MS.gene70503.t1;Parent=MS.gene70503.t1 |
| Gene Sequence |
| Protein sequence |
