Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71350.t1 | XP_003615981.1 | 93.8 | 324 | 18 | 1 | 1 | 324 | 1 | 322 | 6.20E-173 | 616.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71350.t1 | P22195 | 59.7 | 300 | 115 | 4 | 25 | 323 | 22 | 316 | 1.3e-94 | 347.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71350.t1 | G7KFK8 | 93.8 | 324 | 18 | 1 | 1 | 324 | 1 | 322 | 4.5e-173 | 616.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene71350 | 0.846181 | 2.55E-59 | -1.69E-46 |
| MS.gene050095 | MS.gene71350 | 0.817378 | 3.40E-52 | -1.69E-46 |
| MS.gene050096 | MS.gene71350 | 0.838013 | 3.70E-57 | -1.69E-46 |
| MS.gene050720 | MS.gene71350 | 0.809433 | 1.90E-50 | -1.69E-46 |
| MS.gene050822 | MS.gene71350 | 0.805456 | 1.32E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene71350 | 0.826655 | 2.41E-54 | -1.69E-46 |
| MS.gene051440 | MS.gene71350 | 0.807073 | 6.04E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene71350 | 0.831022 | 2.11E-55 | -1.69E-46 |
| MS.gene052212 | MS.gene71350 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene05240 | MS.gene71350 | 0.830324 | 3.13E-55 | -1.69E-46 |
| MS.gene053031 | MS.gene71350 | 0.828473 | 8.82E-55 | -1.69E-46 |
| MS.gene053406 | MS.gene71350 | 0.830159 | 3.44E-55 | -1.69E-46 |
| MS.gene053887 | MS.gene71350 | 0.80929 | 2.04E-50 | -1.69E-46 |
| MS.gene054146 | MS.gene71350 | 0.831036 | 2.10E-55 | -1.69E-46 |
| MS.gene054277 | MS.gene71350 | 0.82257 | 2.21E-53 | -1.69E-46 |
| MS.gene054742 | MS.gene71350 | 0.824027 | 1.01E-53 | -1.69E-46 |
| MS.gene055240 | MS.gene71350 | 0.833599 | 4.86E-56 | -1.69E-46 |
| MS.gene056076 | MS.gene71350 | 0.820984 | 5.14E-53 | -1.69E-46 |
| MS.gene056748 | MS.gene71350 | 0.817936 | 2.55E-52 | -1.69E-46 |
| MS.gene056920 | MS.gene71350 | 0.826929 | 2.07E-54 | -1.69E-46 |
| MS.gene056922 | MS.gene71350 | 0.808663 | 2.77E-50 | -1.69E-46 |
| MS.gene057544 | MS.gene71350 | 0.818658 | 1.75E-52 | -1.69E-46 |
| MS.gene057820 | MS.gene71350 | 0.826473 | 2.66E-54 | -1.69E-46 |
| MS.gene058603 | MS.gene71350 | 0.802188 | 6.32E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene71350 | 0.812933 | 3.30E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71350.t1 | MTR_5g074760 | 93.827 | 324 | 18 | 1 | 1 | 324 | 1 | 322 | 0.0 | 624 |
| MS.gene71350.t1 | MTR_5g074740 | 92.308 | 325 | 23 | 1 | 1 | 325 | 1 | 323 | 0.0 | 616 |
| MS.gene71350.t1 | MTR_5g074710 | 85.846 | 325 | 44 | 1 | 1 | 325 | 1 | 323 | 0.0 | 583 |
| MS.gene71350.t1 | MTR_5g074860 | 70.978 | 317 | 92 | 0 | 6 | 322 | 8 | 324 | 8.10e-172 | 479 |
| MS.gene71350.t1 | MTR_3g467600 | 64.984 | 317 | 108 | 2 | 8 | 323 | 10 | 324 | 4.67e-146 | 414 |
| MS.gene71350.t1 | MTR_5g074700 | 85.841 | 226 | 18 | 1 | 100 | 325 | 5 | 216 | 2.91e-139 | 393 |
| MS.gene71350.t1 | MTR_5g074860 | 61.199 | 317 | 84 | 1 | 6 | 322 | 8 | 285 | 5.95e-139 | 395 |
| MS.gene71350.t1 | MTR_4g029170 | 58.462 | 325 | 129 | 4 | 1 | 323 | 1 | 321 | 5.73e-128 | 368 |
| MS.gene71350.t1 | MTR_4g029180 | 62.500 | 296 | 105 | 4 | 30 | 323 | 30 | 321 | 3.73e-124 | 358 |
| MS.gene71350.t1 | MTR_5g074970 | 55.901 | 322 | 128 | 8 | 7 | 323 | 14 | 326 | 1.59e-119 | 347 |
| MS.gene71350.t1 | MTR_3g466200 | 55.000 | 320 | 133 | 8 | 8 | 323 | 8 | 320 | 1.65e-119 | 347 |
| MS.gene71350.t1 | MTR_3g072190 | 55.172 | 319 | 135 | 5 | 8 | 323 | 5 | 318 | 1.20e-116 | 340 |
| MS.gene71350.t1 | MTR_5g083860 | 54.062 | 320 | 135 | 6 | 7 | 323 | 15 | 325 | 3.02e-115 | 336 |
| MS.gene71350.t1 | MTR_3g094650 | 55.096 | 314 | 133 | 5 | 13 | 323 | 14 | 322 | 2.44e-114 | 334 |
| MS.gene71350.t1 | MTR_2g084080 | 54.114 | 316 | 139 | 6 | 9 | 323 | 7 | 317 | 1.71e-113 | 332 |
| MS.gene71350.t1 | MTR_2g084020 | 53.395 | 324 | 144 | 6 | 1 | 323 | 1 | 318 | 4.20e-113 | 330 |
| MS.gene71350.t1 | MTR_2g084010 | 53.086 | 324 | 145 | 5 | 1 | 323 | 1 | 318 | 7.99e-113 | 330 |
| MS.gene71350.t1 | MTR_4g029200 | 54.575 | 306 | 133 | 5 | 19 | 323 | 38 | 338 | 2.23e-111 | 327 |
| MS.gene71350.t1 | MTR_2g084110 | 55.016 | 309 | 133 | 6 | 16 | 323 | 14 | 317 | 8.78e-111 | 325 |
| MS.gene71350.t1 | MTR_2g084090 | 54.984 | 311 | 131 | 7 | 16 | 323 | 14 | 318 | 3.91e-110 | 323 |
| MS.gene71350.t1 | MTR_2g084000 | 51.875 | 320 | 145 | 6 | 9 | 323 | 4 | 319 | 1.02e-109 | 322 |
| MS.gene71350.t1 | MTR_1g115900 | 52.665 | 319 | 142 | 7 | 8 | 323 | 9 | 321 | 1.28e-109 | 322 |
| MS.gene71350.t1 | MTR_3g094670 | 55.031 | 318 | 135 | 6 | 9 | 323 | 10 | 322 | 5.37e-109 | 320 |
| MS.gene71350.t1 | MTR_3g094630 | 55.031 | 318 | 135 | 5 | 9 | 323 | 10 | 322 | 6.03e-108 | 318 |
| MS.gene71350.t1 | MTR_7g072510 | 50.949 | 316 | 146 | 5 | 9 | 323 | 5 | 312 | 9.36e-107 | 314 |
| MS.gene71350.t1 | MTR_7g072480 | 53.016 | 315 | 141 | 5 | 10 | 323 | 8 | 316 | 1.01e-105 | 311 |
| MS.gene71350.t1 | MTR_4g083710 | 49.688 | 320 | 152 | 6 | 9 | 323 | 9 | 324 | 4.86e-105 | 310 |
| MS.gene71350.t1 | MTR_4g029190 | 51.485 | 303 | 138 | 6 | 25 | 323 | 43 | 340 | 1.48e-102 | 305 |
| MS.gene71350.t1 | MTR_3g466180 | 52.215 | 316 | 145 | 4 | 9 | 323 | 13 | 323 | 3.98e-102 | 303 |
| MS.gene71350.t1 | MTR_7g026990 | 48.589 | 319 | 157 | 7 | 6 | 323 | 10 | 322 | 2.83e-101 | 301 |
| MS.gene71350.t1 | MTR_5g021060 | 51.148 | 305 | 137 | 5 | 27 | 323 | 30 | 330 | 2.69e-100 | 298 |
| MS.gene71350.t1 | MTR_4g074995 | 48.580 | 317 | 141 | 7 | 12 | 323 | 9 | 308 | 1.04e-97 | 291 |
| MS.gene71350.t1 | MTR_8g076820 | 50.164 | 305 | 140 | 5 | 27 | 323 | 30 | 330 | 1.94e-97 | 291 |
| MS.gene71350.t1 | MTR_3g072190 | 56.471 | 255 | 105 | 4 | 70 | 323 | 2 | 251 | 4.69e-94 | 280 |
| MS.gene71350.t1 | MTR_7g093370 | 45.231 | 325 | 166 | 5 | 8 | 323 | 50 | 371 | 4.70e-94 | 284 |
| MS.gene71350.t1 | MTR_2g029560 | 45.619 | 331 | 166 | 6 | 1 | 323 | 1 | 325 | 8.13e-94 | 282 |
| MS.gene71350.t1 | MTR_4g125940 | 48.036 | 331 | 156 | 7 | 4 | 324 | 6 | 330 | 2.52e-93 | 281 |
| MS.gene71350.t1 | MTR_2g028980 | 46.646 | 328 | 160 | 6 | 9 | 324 | 7 | 331 | 9.55e-93 | 280 |
| MS.gene71350.t1 | MTR_5g017850 | 48.193 | 332 | 157 | 9 | 1 | 323 | 1 | 326 | 2.18e-91 | 275 |
| MS.gene71350.t1 | MTR_1g022970 | 46.885 | 305 | 151 | 4 | 27 | 323 | 46 | 347 | 8.00e-91 | 275 |
| MS.gene71350.t1 | MTR_1g054205 | 45.338 | 311 | 158 | 5 | 22 | 323 | 19 | 326 | 4.55e-90 | 272 |
| MS.gene71350.t1 | MTR_2g040000 | 47.319 | 317 | 151 | 7 | 18 | 323 | 20 | 331 | 1.45e-89 | 271 |
| MS.gene71350.t1 | MTR_5g017860 | 46.687 | 332 | 162 | 9 | 1 | 323 | 1 | 326 | 1.97e-89 | 270 |
| MS.gene71350.t1 | MTR_4g074990 | 46.130 | 323 | 147 | 7 | 8 | 323 | 3 | 305 | 2.03e-89 | 270 |
| MS.gene71350.t1 | MTR_2g029800 | 47.883 | 307 | 149 | 5 | 25 | 323 | 27 | 330 | 2.73e-89 | 271 |
| MS.gene71350.t1 | MTR_4g122640 | 46.580 | 307 | 154 | 6 | 23 | 323 | 34 | 336 | 1.66e-88 | 268 |
| MS.gene71350.t1 | MTR_2g029830 | 46.254 | 307 | 154 | 5 | 25 | 323 | 26 | 329 | 5.03e-88 | 268 |
| MS.gene71350.t1 | MTR_2g029815 | 44.000 | 325 | 168 | 5 | 7 | 323 | 12 | 330 | 5.40e-88 | 268 |
| MS.gene71350.t1 | MTR_2g029730 | 46.349 | 315 | 158 | 5 | 17 | 323 | 15 | 326 | 6.78e-88 | 267 |
| MS.gene71350.t1 | MTR_4g030890 | 47.059 | 306 | 148 | 5 | 25 | 323 | 98 | 396 | 3.03e-87 | 268 |
| MS.gene71350.t1 | MTR_2g029860 | 44.099 | 322 | 167 | 5 | 10 | 323 | 14 | 330 | 1.05e-86 | 265 |
| MS.gene71350.t1 | MTR_4g031140 | 44.037 | 327 | 169 | 5 | 4 | 323 | 5 | 324 | 1.74e-86 | 263 |
| MS.gene71350.t1 | MTR_2g029820 | 45.277 | 307 | 157 | 4 | 25 | 323 | 27 | 330 | 1.24e-85 | 262 |
| MS.gene71350.t1 | MTR_4g125940 | 51.971 | 279 | 119 | 6 | 56 | 324 | 2 | 275 | 1.83e-85 | 259 |
| MS.gene71350.t1 | MTR_2g029740 | 44.172 | 326 | 167 | 6 | 7 | 324 | 13 | 331 | 7.74e-85 | 260 |
| MS.gene71350.t1 | MTR_5g014100 | 47.097 | 310 | 147 | 6 | 27 | 323 | 26 | 331 | 2.34e-84 | 258 |
| MS.gene71350.t1 | MTR_4g074980 | 46.667 | 300 | 131 | 7 | 25 | 323 | 23 | 294 | 4.39e-84 | 256 |
| MS.gene71350.t1 | MTR_5g049280 | 45.955 | 309 | 153 | 8 | 26 | 323 | 32 | 337 | 1.66e-83 | 256 |
| MS.gene71350.t1 | MTR_2g029910 | 44.681 | 329 | 165 | 8 | 7 | 325 | 13 | 334 | 4.33e-83 | 255 |
| MS.gene71350.t1 | MTR_2g029750 | 44.785 | 326 | 165 | 7 | 7 | 324 | 13 | 331 | 5.48e-83 | 255 |
| MS.gene71350.t1 | MTR_1g101830 | 44.444 | 324 | 161 | 11 | 8 | 323 | 10 | 322 | 3.96e-82 | 252 |
| MS.gene71350.t1 | MTR_1g077000 | 45.302 | 298 | 153 | 7 | 27 | 323 | 39 | 327 | 9.26e-82 | 251 |
| MS.gene71350.t1 | MTR_2g029850 | 44.625 | 307 | 159 | 5 | 25 | 323 | 27 | 330 | 2.87e-80 | 248 |
| MS.gene71350.t1 | MTR_3g092990 | 41.265 | 332 | 180 | 7 | 1 | 323 | 1 | 326 | 6.00e-80 | 246 |
| MS.gene71350.t1 | MTR_1g038680 | 42.763 | 304 | 159 | 7 | 31 | 323 | 33 | 332 | 3.35e-76 | 237 |
| MS.gene71350.t1 | MTR_1g086320 | 40.923 | 325 | 178 | 6 | 9 | 323 | 13 | 333 | 9.86e-76 | 236 |
| MS.gene71350.t1 | MTR_1g086490 | 41.018 | 334 | 176 | 6 | 9 | 325 | 13 | 342 | 1.82e-75 | 235 |
| MS.gene71350.t1 | MTR_4g046713 | 40.663 | 332 | 182 | 8 | 1 | 323 | 1 | 326 | 6.73e-74 | 231 |
| MS.gene71350.t1 | MTR_4g074980 | 48.594 | 249 | 118 | 6 | 10 | 253 | 10 | 253 | 8.92e-74 | 228 |
| MS.gene71350.t1 | MTR_0155s0040 | 41.333 | 300 | 166 | 7 | 25 | 323 | 25 | 315 | 1.29e-73 | 230 |
| MS.gene71350.t1 | MTR_2g088770 | 41.742 | 333 | 176 | 11 | 1 | 323 | 1 | 325 | 2.05e-73 | 229 |
| MS.gene71350.t1 | MTR_2g029830 | 46.718 | 259 | 127 | 5 | 73 | 323 | 6 | 261 | 6.77e-70 | 219 |
| MS.gene71350.t1 | MTR_3g092990 | 39.157 | 332 | 176 | 8 | 1 | 323 | 1 | 315 | 2.02e-68 | 216 |
| MS.gene71350.t1 | MTR_1g025980 | 39.937 | 318 | 174 | 9 | 9 | 318 | 7 | 315 | 1.68e-67 | 214 |
| MS.gene71350.t1 | MTR_5g022870 | 39.692 | 325 | 175 | 9 | 9 | 323 | 3 | 316 | 8.09e-67 | 212 |
| MS.gene71350.t1 | MTR_8g075100 | 40.656 | 305 | 162 | 8 | 27 | 323 | 26 | 319 | 8.10e-67 | 213 |
| MS.gene71350.t1 | MTR_2g008710 | 39.939 | 328 | 174 | 10 | 9 | 323 | 8 | 325 | 1.25e-65 | 209 |
| MS.gene71350.t1 | MTR_7g107520 | 39.692 | 325 | 177 | 8 | 8 | 323 | 6 | 320 | 1.27e-65 | 209 |
| MS.gene71350.t1 | MTR_7g029030 | 40.498 | 321 | 178 | 8 | 9 | 323 | 7 | 320 | 4.80e-65 | 208 |
| MS.gene71350.t1 | MTR_6g027440 | 36.875 | 320 | 189 | 6 | 9 | 323 | 3 | 314 | 1.27e-64 | 207 |
| MS.gene71350.t1 | MTR_4g133800 | 40.461 | 304 | 159 | 11 | 31 | 325 | 45 | 335 | 2.34e-62 | 201 |
| MS.gene71350.t1 | MTR_1g009750 | 40.256 | 313 | 162 | 11 | 26 | 323 | 26 | 328 | 7.31e-62 | 200 |
| MS.gene71350.t1 | MTR_8g062780 | 38.462 | 325 | 185 | 6 | 11 | 325 | 7 | 326 | 8.55e-62 | 200 |
| MS.gene71350.t1 | MTR_2g437770 | 41.639 | 305 | 157 | 10 | 27 | 323 | 50 | 341 | 2.91e-61 | 199 |
| MS.gene71350.t1 | MTR_7g086820 | 37.908 | 306 | 174 | 8 | 25 | 324 | 18 | 313 | 5.88e-61 | 197 |
| MS.gene71350.t1 | MTR_5g016010 | 37.690 | 329 | 184 | 9 | 6 | 319 | 3 | 325 | 7.33e-60 | 195 |
| MS.gene71350.t1 | MTR_1g090760 | 34.954 | 329 | 198 | 7 | 8 | 325 | 9 | 332 | 6.63e-59 | 192 |
| MS.gene71350.t1 | MTR_4g127670 | 39.744 | 312 | 163 | 10 | 26 | 323 | 23 | 323 | 1.43e-58 | 191 |
| MS.gene71350.t1 | MTR_4g087965 | 39.739 | 307 | 167 | 9 | 26 | 319 | 41 | 342 | 2.82e-58 | 191 |
| MS.gene71350.t1 | MTR_4g114210 | 37.273 | 330 | 181 | 10 | 10 | 323 | 1 | 320 | 7.67e-58 | 189 |
| MS.gene71350.t1 | MTR_7g086870 | 37.458 | 299 | 176 | 8 | 27 | 323 | 22 | 311 | 1.10e-57 | 189 |
| MS.gene71350.t1 | MTR_4g095450 | 37.423 | 326 | 191 | 8 | 1 | 319 | 1 | 320 | 5.00e-56 | 185 |
| MS.gene71350.t1 | MTR_2g078610 | 36.134 | 357 | 179 | 10 | 9 | 322 | 55 | 405 | 1.06e-55 | 186 |
| MS.gene71350.t1 | MTR_2g099175 | 36.538 | 312 | 175 | 9 | 26 | 324 | 35 | 336 | 1.32e-55 | 184 |
| MS.gene71350.t1 | MTR_3g072210 | 51.596 | 188 | 86 | 4 | 138 | 323 | 54 | 238 | 2.39e-55 | 180 |
| MS.gene71350.t1 | MTR_2g077990 | 36.695 | 357 | 177 | 11 | 9 | 322 | 55 | 405 | 4.91e-55 | 184 |
| MS.gene71350.t1 | MTR_2g067440 | 36.337 | 344 | 171 | 10 | 20 | 322 | 50 | 386 | 1.94e-54 | 182 |
| MS.gene71350.t1 | MTR_0286s0010 | 35.802 | 324 | 190 | 9 | 12 | 323 | 17 | 334 | 1.21e-53 | 179 |
| MS.gene71350.t1 | MTR_6g008075 | 35.802 | 324 | 190 | 9 | 12 | 323 | 17 | 334 | 1.21e-53 | 179 |
| MS.gene71350.t1 | MTR_6g043240 | 35.866 | 329 | 187 | 10 | 8 | 323 | 14 | 331 | 4.96e-53 | 178 |
| MS.gene71350.t1 | MTR_2g008160 | 37.658 | 316 | 166 | 9 | 25 | 323 | 22 | 323 | 5.34e-53 | 177 |
| MS.gene71350.t1 | MTR_6g043280 | 34.967 | 306 | 187 | 8 | 22 | 323 | 35 | 332 | 4.61e-52 | 175 |
| MS.gene71350.t1 | MTR_4g132490 | 31.475 | 305 | 197 | 5 | 26 | 323 | 28 | 327 | 2.68e-50 | 170 |
| MS.gene71350.t1 | MTR_0147s0010 | 33.951 | 324 | 167 | 8 | 27 | 322 | 77 | 381 | 3.32e-50 | 171 |
| MS.gene71350.t1 | MTR_2g078280 | 36.628 | 344 | 169 | 11 | 9 | 309 | 55 | 392 | 4.95e-50 | 171 |
| MS.gene71350.t1 | MTR_1g066710 | 34.754 | 305 | 187 | 7 | 25 | 323 | 25 | 323 | 5.48e-50 | 169 |
| MS.gene71350.t1 | MTR_1g009750 | 36.741 | 313 | 156 | 11 | 26 | 323 | 26 | 311 | 7.01e-50 | 168 |
| MS.gene71350.t1 | MTR_3g105790 | 35.474 | 327 | 188 | 7 | 11 | 325 | 9 | 324 | 1.51e-48 | 165 |
| MS.gene71350.t1 | MTR_1g066380 | 34.314 | 306 | 189 | 7 | 24 | 323 | 24 | 323 | 2.37e-48 | 165 |
| MS.gene71350.t1 | MTR_6g043460 | 35.880 | 301 | 183 | 7 | 22 | 319 | 31 | 324 | 2.41e-48 | 166 |
| MS.gene71350.t1 | MTR_1g066640 | 34.426 | 305 | 188 | 7 | 25 | 323 | 25 | 323 | 2.54e-47 | 162 |
| MS.gene71350.t1 | MTR_2g008730 | 42.105 | 247 | 124 | 8 | 89 | 323 | 62 | 301 | 4.17e-47 | 161 |
| MS.gene71350.t1 | MTR_5g033470 | 32.581 | 310 | 191 | 8 | 27 | 323 | 73 | 377 | 4.01e-46 | 160 |
| MS.gene71350.t1 | MTR_2g067450 | 36.102 | 313 | 173 | 10 | 25 | 322 | 9 | 309 | 1.17e-45 | 157 |
| MS.gene71350.t1 | MTR_1g066680 | 33.770 | 305 | 189 | 8 | 25 | 323 | 25 | 322 | 7.62e-45 | 155 |
| MS.gene71350.t1 | MTR_3g072260 | 65.455 | 110 | 37 | 1 | 26 | 135 | 25 | 133 | 3.16e-43 | 145 |
| MS.gene71350.t1 | MTR_4g132110 | 32.895 | 304 | 192 | 6 | 27 | 324 | 32 | 329 | 3.72e-43 | 152 |
| MS.gene71350.t1 | MTR_7g072490 | 40.816 | 245 | 85 | 6 | 73 | 316 | 2 | 187 | 6.26e-43 | 147 |
| MS.gene71350.t1 | MTR_4g132110 | 30.267 | 337 | 216 | 7 | 3 | 324 | 2 | 334 | 4.16e-41 | 146 |
| MS.gene71350.t1 | MTR_2g008160 | 33.981 | 309 | 152 | 9 | 25 | 323 | 22 | 288 | 1.05e-40 | 144 |
| MS.gene71350.t1 | MTR_2g008160 | 44.633 | 177 | 91 | 5 | 25 | 201 | 22 | 191 | 7.82e-40 | 139 |
| MS.gene71350.t1 | MTR_5g074770 | 55.357 | 112 | 45 | 1 | 211 | 322 | 2 | 108 | 6.71e-38 | 131 |
| MS.gene71350.t1 | MTR_2g029880 | 40.000 | 190 | 94 | 3 | 145 | 325 | 12 | 190 | 2.80e-37 | 132 |
| MS.gene71350.t1 | MTR_1g066380 | 32.819 | 259 | 162 | 7 | 71 | 323 | 3 | 255 | 1.50e-35 | 129 |
| MS.gene71350.t1 | MTR_3g105790 | 36.667 | 240 | 137 | 5 | 94 | 323 | 12 | 246 | 4.17e-33 | 123 |
| MS.gene71350.t1 | MTR_2g077980 | 30.466 | 279 | 143 | 10 | 89 | 322 | 11 | 283 | 7.10e-24 | 99.4 |
| MS.gene71350.t1 | MTR_2g078560 | 31.441 | 229 | 114 | 7 | 133 | 322 | 95 | 319 | 5.12e-21 | 92.0 |
| MS.gene71350.t1 | MTR_3g462850 | 38.298 | 141 | 76 | 5 | 194 | 323 | 9 | 149 | 2.51e-19 | 83.6 |
| MS.gene71350.t1 | MTR_6g048160 | 56.164 | 73 | 27 | 3 | 66 | 138 | 22 | 89 | 8.48e-19 | 80.1 |
| MS.gene71350.t1 | MTR_4g031040 | 34.320 | 169 | 72 | 3 | 86 | 254 | 1 | 130 | 1.17e-18 | 81.3 |
| MS.gene71350.t1 | MTR_5g058120 | 35.669 | 157 | 92 | 3 | 165 | 319 | 6 | 155 | 1.29e-18 | 84.3 |
| MS.gene71350.t1 | MTR_4g114220 | 48.193 | 83 | 32 | 3 | 53 | 135 | 29 | 100 | 1.47e-17 | 78.6 |
| MS.gene71350.t1 | MTR_3g086710 | 59.322 | 59 | 24 | 0 | 14 | 72 | 6 | 64 | 1.07e-16 | 74.7 |
| MS.gene71350.t1 | MTR_1g089005 | 37.500 | 136 | 75 | 4 | 11 | 140 | 1 | 132 | 1.52e-16 | 76.3 |
| MS.gene71350.t1 | MTR_7g086790 | 31.383 | 188 | 110 | 7 | 74 | 260 | 17 | 186 | 5.38e-15 | 72.8 |
| MS.gene71350.t1 | MTR_2g029930 | 41.304 | 92 | 29 | 2 | 25 | 105 | 17 | 94 | 5.75e-15 | 70.1 |
| MS.gene71350.t1 | MTR_1g098320 | 40.741 | 81 | 46 | 1 | 244 | 324 | 47 | 125 | 6.28e-12 | 62.8 |
| MS.gene71350.t1 | MTR_4g073410 | 26.172 | 256 | 131 | 9 | 61 | 305 | 35 | 243 | 9.26e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71350.t1 | AT5G05340 | 55.960 | 302 | 125 | 5 | 25 | 323 | 28 | 324 | 9.83e-116 | 337 |
| MS.gene71350.t1 | AT5G58390 | 53.459 | 318 | 139 | 6 | 10 | 323 | 4 | 316 | 4.67e-106 | 313 |
| MS.gene71350.t1 | AT5G58400 | 49.688 | 320 | 150 | 7 | 8 | 323 | 13 | 325 | 5.33e-103 | 305 |
| MS.gene71350.t1 | AT4G36430 | 50.489 | 307 | 140 | 6 | 25 | 323 | 28 | 330 | 1.23e-100 | 299 |
| MS.gene71350.t1 | AT2G18150 | 48.534 | 307 | 146 | 5 | 25 | 323 | 34 | 336 | 6.78e-100 | 298 |
| MS.gene71350.t1 | AT1G14550 | 49.527 | 317 | 153 | 6 | 10 | 323 | 9 | 321 | 2.51e-99 | 296 |
| MS.gene71350.t1 | AT5G66390 | 50.327 | 306 | 140 | 5 | 27 | 324 | 33 | 334 | 1.46e-98 | 294 |
| MS.gene71350.t1 | AT2G18140 | 48.254 | 315 | 151 | 5 | 17 | 323 | 25 | 335 | 9.60e-97 | 290 |
| MS.gene71350.t1 | AT5G06720 | 44.753 | 324 | 168 | 4 | 8 | 323 | 13 | 333 | 4.98e-95 | 285 |
| MS.gene71350.t1 | AT1G44970 | 47.883 | 307 | 149 | 5 | 25 | 323 | 43 | 346 | 1.70e-93 | 281 |
| MS.gene71350.t1 | AT1G14540 | 48.837 | 301 | 148 | 5 | 25 | 323 | 19 | 315 | 3.17e-93 | 280 |
| MS.gene71350.t1 | AT5G06730 | 43.519 | 324 | 172 | 4 | 8 | 323 | 14 | 334 | 3.78e-92 | 279 |
| MS.gene71350.t1 | AT3G50990 | 45.833 | 312 | 157 | 5 | 21 | 324 | 35 | 342 | 7.80e-91 | 275 |
| MS.gene71350.t1 | AT4G08770 | 48.220 | 309 | 147 | 6 | 25 | 323 | 22 | 327 | 1.87e-90 | 274 |
| MS.gene71350.t1 | AT1G49570 | 49.020 | 306 | 140 | 8 | 25 | 319 | 46 | 346 | 4.78e-89 | 270 |
| MS.gene71350.t1 | AT2G38390 | 48.052 | 308 | 148 | 5 | 25 | 323 | 29 | 333 | 5.11e-89 | 270 |
| MS.gene71350.t1 | AT2G38380 | 48.052 | 308 | 148 | 5 | 25 | 323 | 29 | 333 | 9.36e-88 | 267 |
| MS.gene71350.t1 | AT5G19890 | 45.399 | 326 | 159 | 8 | 8 | 323 | 11 | 327 | 2.53e-87 | 265 |
| MS.gene71350.t1 | AT4G08780 | 46.926 | 309 | 151 | 6 | 25 | 323 | 22 | 327 | 8.60e-87 | 265 |
| MS.gene71350.t1 | AT3G49120 | 45.687 | 313 | 157 | 6 | 21 | 323 | 26 | 335 | 2.55e-85 | 261 |
| MS.gene71350.t1 | AT3G32980 | 45.955 | 309 | 154 | 6 | 25 | 323 | 29 | 334 | 2.21e-84 | 258 |
| MS.gene71350.t1 | AT3G49110 | 45.631 | 309 | 155 | 6 | 25 | 323 | 31 | 336 | 1.98e-83 | 256 |
| MS.gene71350.t1 | AT4G16270 | 46.179 | 301 | 146 | 7 | 32 | 323 | 55 | 348 | 3.13e-83 | 255 |
| MS.gene71350.t1 | AT1G68850 | 43.413 | 334 | 164 | 10 | 10 | 323 | 7 | 335 | 2.52e-82 | 253 |
| MS.gene71350.t1 | AT2G35380 | 45.122 | 328 | 162 | 7 | 9 | 323 | 13 | 335 | 3.41e-82 | 253 |
| MS.gene71350.t1 | AT1G71695 | 44.300 | 307 | 162 | 6 | 21 | 323 | 38 | 339 | 1.47e-80 | 249 |
| MS.gene71350.t1 | AT5G51890 | 44.000 | 325 | 162 | 11 | 10 | 323 | 7 | 322 | 1.92e-79 | 245 |
| MS.gene71350.t1 | AT5G19880 | 44.516 | 310 | 158 | 5 | 25 | 323 | 23 | 329 | 5.31e-78 | 241 |
| MS.gene71350.t1 | AT2G22420 | 40.373 | 322 | 177 | 6 | 10 | 324 | 7 | 320 | 2.63e-77 | 239 |
| MS.gene71350.t1 | AT3G01190 | 43.750 | 304 | 156 | 7 | 27 | 323 | 26 | 321 | 8.56e-76 | 236 |
| MS.gene71350.t1 | AT5G15180 | 42.331 | 326 | 173 | 8 | 7 | 323 | 10 | 329 | 3.32e-75 | 234 |
| MS.gene71350.t1 | AT5G42180 | 40.184 | 326 | 171 | 9 | 5 | 322 | 7 | 316 | 1.57e-72 | 227 |
| MS.gene71350.t1 | AT4G33420 | 41.325 | 317 | 175 | 8 | 9 | 323 | 18 | 325 | 3.69e-72 | 226 |
| MS.gene71350.t1 | AT4G33420 | 41.325 | 317 | 175 | 8 | 9 | 323 | 65 | 372 | 1.53e-71 | 226 |
| MS.gene71350.t1 | AT4G11290 | 38.272 | 324 | 185 | 7 | 9 | 323 | 9 | 326 | 2.35e-70 | 222 |
| MS.gene71350.t1 | AT1G05240 | 41.667 | 300 | 158 | 7 | 30 | 319 | 29 | 321 | 1.18e-69 | 220 |
| MS.gene71350.t1 | AT1G05250 | 41.667 | 300 | 158 | 7 | 30 | 319 | 29 | 321 | 1.18e-69 | 220 |
| MS.gene71350.t1 | AT3G03670 | 37.730 | 326 | 183 | 9 | 8 | 323 | 6 | 321 | 1.33e-69 | 219 |
| MS.gene71350.t1 | AT1G05260 | 39.172 | 314 | 176 | 8 | 19 | 323 | 18 | 325 | 1.06e-68 | 218 |
| MS.gene71350.t1 | AT5G64120 | 39.820 | 334 | 177 | 10 | 4 | 323 | 5 | 328 | 1.51e-68 | 217 |
| MS.gene71350.t1 | AT3G21770 | 41.447 | 304 | 163 | 8 | 25 | 319 | 27 | 324 | 1.43e-67 | 215 |
| MS.gene71350.t1 | AT5G17820 | 38.658 | 313 | 169 | 9 | 19 | 323 | 16 | 313 | 9.62e-65 | 207 |
| MS.gene71350.t1 | AT5G17820 | 38.658 | 313 | 169 | 9 | 19 | 323 | 69 | 366 | 6.52e-64 | 206 |
| MS.gene71350.t1 | AT1G30870 | 41.883 | 308 | 155 | 11 | 27 | 323 | 51 | 345 | 8.65e-63 | 203 |
| MS.gene71350.t1 | AT5G40150 | 37.662 | 308 | 174 | 7 | 25 | 323 | 30 | 328 | 2.58e-61 | 199 |
| MS.gene71350.t1 | AT3G28200 | 37.134 | 307 | 176 | 7 | 25 | 323 | 19 | 316 | 1.05e-60 | 197 |
| MS.gene71350.t1 | AT2G41480 | 37.576 | 330 | 183 | 9 | 7 | 323 | 9 | 328 | 1.10e-60 | 197 |
| MS.gene71350.t1 | AT4G17690 | 38.535 | 314 | 181 | 7 | 18 | 325 | 17 | 324 | 1.04e-59 | 194 |
| MS.gene71350.t1 | AT5G47000 | 37.117 | 326 | 191 | 8 | 8 | 325 | 13 | 332 | 2.35e-59 | 194 |
| MS.gene71350.t1 | AT4G26010 | 35.647 | 317 | 191 | 9 | 9 | 323 | 4 | 309 | 7.19e-59 | 192 |
| MS.gene71350.t1 | AT5G39580 | 40.864 | 301 | 160 | 10 | 31 | 323 | 29 | 319 | 7.62e-59 | 192 |
| MS.gene71350.t1 | AT4G26010 | 35.647 | 317 | 191 | 9 | 9 | 323 | 32 | 337 | 1.03e-58 | 192 |
| MS.gene71350.t1 | AT2G35380 | 45.600 | 250 | 119 | 6 | 87 | 323 | 2 | 247 | 1.93e-57 | 186 |
| MS.gene71350.t1 | AT4G33870 | 34.421 | 337 | 170 | 9 | 30 | 322 | 71 | 400 | 2.27e-57 | 191 |
| MS.gene71350.t1 | AT1G34510 | 35.759 | 316 | 192 | 9 | 9 | 323 | 4 | 309 | 7.51e-57 | 186 |
| MS.gene71350.t1 | AT5G22410 | 34.365 | 323 | 191 | 9 | 9 | 320 | 10 | 322 | 9.25e-57 | 187 |
| MS.gene71350.t1 | AT5G64100 | 38.284 | 303 | 167 | 10 | 30 | 323 | 40 | 331 | 3.13e-56 | 186 |
| MS.gene71350.t1 | AT2G18980 | 37.237 | 333 | 185 | 12 | 4 | 323 | 2 | 323 | 3.41e-56 | 185 |
| MS.gene71350.t1 | AT4G25980 | 36.825 | 315 | 181 | 8 | 20 | 323 | 19 | 326 | 1.10e-55 | 184 |
| MS.gene71350.t1 | AT1G24110 | 35.000 | 320 | 190 | 8 | 16 | 323 | 9 | 322 | 2.41e-55 | 183 |
| MS.gene71350.t1 | AT4G37530 | 38.585 | 311 | 173 | 8 | 25 | 323 | 25 | 329 | 3.44e-55 | 183 |
| MS.gene71350.t1 | AT5G67400 | 37.994 | 329 | 184 | 10 | 9 | 323 | 7 | 329 | 1.54e-54 | 181 |
| MS.gene71350.t1 | AT4G30170 | 37.179 | 312 | 172 | 11 | 25 | 323 | 25 | 325 | 3.82e-54 | 180 |
| MS.gene71350.t1 | AT5G64110 | 37.538 | 333 | 184 | 11 | 5 | 323 | 8 | 330 | 7.14e-54 | 179 |
| MS.gene71350.t1 | AT2G39040 | 38.658 | 313 | 172 | 9 | 25 | 323 | 44 | 350 | 1.55e-53 | 179 |
| MS.gene71350.t1 | AT2G24800 | 36.218 | 312 | 177 | 7 | 24 | 323 | 28 | 329 | 2.67e-53 | 178 |
| MS.gene71350.t1 | AT2G34060 | 37.013 | 308 | 176 | 9 | 26 | 320 | 41 | 343 | 4.51e-53 | 178 |
| MS.gene71350.t1 | AT5G14130 | 35.625 | 320 | 189 | 8 | 13 | 323 | 19 | 330 | 5.04e-53 | 177 |
| MS.gene71350.t1 | AT5G14130 | 35.625 | 320 | 189 | 8 | 13 | 323 | 60 | 371 | 1.07e-52 | 177 |
| MS.gene71350.t1 | AT4G31760 | 33.333 | 330 | 201 | 7 | 4 | 323 | 6 | 326 | 1.40e-51 | 173 |
| MS.gene71350.t1 | AT1G77100 | 35.404 | 322 | 189 | 9 | 11 | 323 | 8 | 319 | 1.80e-51 | 173 |
| MS.gene71350.t1 | AT3G49960 | 35.435 | 333 | 187 | 12 | 10 | 323 | 6 | 329 | 7.87e-50 | 169 |
| MS.gene71350.t1 | AT5G24070 | 34.462 | 325 | 186 | 10 | 14 | 323 | 23 | 335 | 1.46e-49 | 169 |
| MS.gene71350.t1 | AT2G43480 | 33.540 | 322 | 188 | 9 | 17 | 323 | 25 | 335 | 1.49e-49 | 168 |
| MS.gene71350.t1 | AT4G37520 | 35.806 | 310 | 183 | 7 | 25 | 323 | 25 | 329 | 1.99e-49 | 168 |
| MS.gene71350.t1 | AT4G37520 | 35.484 | 310 | 181 | 8 | 25 | 323 | 25 | 326 | 1.54e-47 | 163 |
| MS.gene71350.t1 | AT2G37130 | 33.974 | 312 | 195 | 7 | 18 | 323 | 21 | 327 | 2.31e-46 | 160 |
| MS.gene71350.t1 | AT4G37530 | 39.147 | 258 | 141 | 7 | 25 | 270 | 25 | 278 | 3.11e-46 | 158 |
| MS.gene71350.t1 | AT3G17070 | 33.225 | 307 | 190 | 6 | 27 | 323 | 38 | 339 | 3.82e-46 | 159 |
| MS.gene71350.t1 | AT2G37130 | 34.333 | 300 | 186 | 7 | 30 | 323 | 2 | 296 | 5.50e-46 | 158 |
| MS.gene71350.t1 | AT4G21960 | 30.240 | 334 | 217 | 7 | 1 | 324 | 1 | 328 | 1.43e-43 | 152 |
| MS.gene71350.t1 | AT4G25980 | 43.478 | 184 | 97 | 5 | 18 | 201 | 62 | 238 | 5.17e-41 | 145 |
| MS.gene71350.t1 | AT5G39580 | 44.828 | 174 | 88 | 6 | 31 | 204 | 29 | 194 | 2.90e-35 | 128 |
| MS.gene71350.t1 | AT2G24800 | 41.860 | 172 | 93 | 3 | 24 | 195 | 28 | 192 | 1.24e-32 | 121 |
| MS.gene71350.t1 | AT3G17070 | 30.466 | 279 | 178 | 7 | 55 | 323 | 4 | 276 | 1.59e-31 | 119 |
| MS.gene71350.t1 | AT4G32320 | 26.523 | 279 | 134 | 11 | 41 | 304 | 99 | 321 | 3.87e-12 | 66.6 |
Find 50 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGAACAACTAAGTCTTTA+AGG | 0.101127 | 5.3:+59370571 | None:intergenic |
| CCTCTAATTGAATTGTTATT+TGG | 0.117052 | 5.3:+59371184 | None:intergenic |
| CAAATTCTGTCATAATAATT+TGG | 0.189849 | 5.3:+59371611 | None:intergenic |
| CCAAATAACAATTCAATTAG+AGG | 0.210718 | 5.3:-59371184 | MS.gene71350:CDS |
| GAAGCCTCTTACTGGGAAAA+AGG | 0.220866 | 5.3:-59370214 | MS.gene71350:CDS |
| TTGCAAATTTGCTGCAAAAT+TGG | 0.238319 | 5.3:+59370473 | None:intergenic |
| TATCCTTCTTCATTCATATC+TGG | 0.282510 | 5.3:+59370160 | None:intergenic |
| GGTAATTTGAAGCCTCTTAC+TGG | 0.288056 | 5.3:-59370222 | MS.gene71350:CDS |
| AAAGACTTAGTTGTTCTATC+TGG | 0.291396 | 5.3:-59370567 | MS.gene71350:CDS |
| GTTTCTAAAGTTAGTGCATT+TGG | 0.291735 | 5.3:+59370524 | None:intergenic |
| GTAACACTTGGTACCAATAT+TGG | 0.304974 | 5.3:+59370706 | None:intergenic |
| TAGAATCAAATGGTGCTAAA+TGG | 0.336128 | 5.3:+59370421 | None:intergenic |
| CTATCTGGTGGTCACACAAT+TGG | 0.351955 | 5.3:-59370552 | MS.gene71350:CDS |
| GACATCACCTTTGCAAGCTT+TGG | 0.386204 | 5.3:+59371126 | None:intergenic |
| TTTATGATTGGCAATGCCTT+TGG | 0.399242 | 5.3:+59371587 | None:intergenic |
| AGTTGACACAAAATACTATA+AGG | 0.410019 | 5.3:-59370388 | MS.gene71350:CDS |
| AGTTGGGAGGTAACCAATAT+TGG | 0.411115 | 5.3:-59370719 | MS.gene71350:CDS |
| GATGATACCCCTACCTTCAT+TGG | 0.417104 | 5.3:-59371223 | MS.gene71350:CDS |
| AATGCACTAACTTTAGAAAC+AGG | 0.420538 | 5.3:-59370521 | MS.gene71350:CDS |
| TGGAGTTTCTATGATTAAGA+TGG | 0.424465 | 5.3:-59370244 | MS.gene71350:CDS |
| AATTATTCGCGAACCACGCA+TGG | 0.442168 | 5.3:-59371546 | MS.gene71350:CDS |
| TGGTCGTCGCTGCTGATTTG+AGG | 0.448420 | 5.3:+59370441 | None:intergenic |
| TATTGGTACCAAGTGTTACT+AGG | 0.448839 | 5.3:-59370702 | MS.gene71350:CDS |
| AGCTGCTATAGCTAAAATAT+CGG | 0.458807 | 5.3:+59371093 | None:intergenic |
| GGAGTTTCTATGATTAAGAT+GGG | 0.461747 | 5.3:-59370243 | MS.gene71350:CDS |
| CTCTTCTTCCTAGTAACACT+TGG | 0.476428 | 5.3:+59370694 | None:intergenic |
| TGCAGTCTTCTCACCAATGA+AGG | 0.480905 | 5.3:+59371210 | None:intergenic |
| GGTCGTCGCTGCTGATTTGA+GGG | 0.481283 | 5.3:+59370442 | None:intergenic |
| GAGATTCAAGATTTGCAAGC+AGG | 0.488930 | 5.3:-59370674 | MS.gene71350:CDS |
| TGCAAAATTGGTGTCTATGT+TGG | 0.490826 | 5.3:+59370485 | None:intergenic |
| CTTGAAGGAGTAGAATCAAA+TGG | 0.501343 | 5.3:+59370411 | None:intergenic |
| GACTTAGTTGTTCTATCTGG+TGG | 0.509368 | 5.3:-59370564 | MS.gene71350:CDS |
| GTAATTTGAAGCCTCTTACT+GGG | 0.519840 | 5.3:-59370221 | MS.gene71350:CDS |
| TCTTCTCACCAATGAAGGTA+GGG | 0.536322 | 5.3:+59371215 | None:intergenic |
| AAAGCTCTTGATCAGAATGA+AGG | 0.549289 | 5.3:+59370343 | None:intergenic |
| TTACGTTAACAAAGCAGTCA+TGG | 0.552379 | 5.3:+59371498 | None:intergenic |
| AGATTCAAGATTTGCAAGCA+GGG | 0.563486 | 5.3:-59370673 | MS.gene71350:CDS |
| TGGTTCTCAAAGTGATAGAT+TGG | 0.568189 | 5.3:-59370310 | MS.gene71350:CDS |
| GGAGTGAGCTTTGCAATGGT+AGG | 0.578435 | 5.3:+59371632 | None:intergenic |
| GTCTTCTCACCAATGAAGGT+AGG | 0.586272 | 5.3:+59371214 | None:intergenic |
| ATTTGGAGTGAGCTTTGCAA+TGG | 0.594055 | 5.3:+59371628 | None:intergenic |
| GAGCCTACACAGGGTTGTGA+TGG | 0.597414 | 5.3:-59371259 | MS.gene71350:intron |
| TTCTTCAATCAACAGTTGGG+AGG | 0.601444 | 5.3:-59370732 | MS.gene71350:intron |
| CTTCTCACCAATGAAGGTAG+GGG | 0.615489 | 5.3:+59371216 | None:intergenic |
| AGCAACGATGCTCCCATGCG+TGG | 0.623123 | 5.3:+59371533 | None:intergenic |
| TTATGACAGAATTTGTCCAA+AGG | 0.624218 | 5.3:-59371603 | MS.gene71350:CDS |
| ATCACAAATTTCAAGTCACA+TGG | 0.624562 | 5.3:-59370600 | MS.gene71350:CDS |
| AAGGCTTTGTTGTATAAACA+AGG | 0.625131 | 5.3:-59370369 | MS.gene71350:CDS |
| GAAGTTACCAAAGCTTGCAA+AGG | 0.633455 | 5.3:-59371133 | MS.gene71350:CDS |
| ATTATTCGCGAACCACGCAT+GGG | 0.634869 | 5.3:-59371545 | MS.gene71350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATTACATTTTTAAAATT+AGG | - | chr5.3:59370414-59370433 | MS.gene71350:CDS | 10.0% |
| !!! | AAGACTATTTTTTTATATTG+CGG | + | chr5.3:59370887-59370906 | None:intergenic | 15.0% |
| !!! | ATATGAGTTTAATTTAAACA+TGG | + | chr5.3:59371032-59371051 | None:intergenic | 15.0% |
| !!! | TTAACAATTGATTTTATGAT+TGG | + | chr5.3:59370296-59370315 | None:intergenic | 15.0% |
| !! | CAAATTCTGTCATAATAATT+TGG | + | chr5.3:59370260-59370279 | None:intergenic | 20.0% |
| !! | TAAAAATCACAACATAACAT+TGG | + | chr5.3:59370190-59370209 | None:intergenic | 20.0% |
| !! | TTGTATTGCAGAAAAATTTA+GGG | + | chr5.3:59370971-59370990 | None:intergenic | 20.0% |
| !!! | TACAGCTTTTTATATAACAT+TGG | + | chr5.3:59370947-59370966 | None:intergenic | 20.0% |
| !!! | TATTTTGCACTTTTTAATCA+TGG | - | chr5.3:59370833-59370852 | MS.gene71350:intron | 20.0% |
| !!! | TGTTAAGTGACTATTTTATA+AGG | + | chr5.3:59370445-59370464 | None:intergenic | 20.0% |
| ! | AGTTGACACAAAATACTATA+AGG | - | chr5.3:59371480-59371499 | MS.gene71350:intron | 25.0% |
| ! | ATAGAACAACTAAGTCTTTA+AGG | + | chr5.3:59371300-59371319 | None:intergenic | 25.0% |
| ! | CCAAATAACAATTCAATTAG+AGG | - | chr5.3:59370684-59370703 | MS.gene71350:CDS | 25.0% |
| ! | CTTGTATTGCAGAAAAATTT+AGG | + | chr5.3:59370972-59370991 | None:intergenic | 25.0% |
| !! | AACATTGGAAGATTTTATTG+CGG | + | chr5.3:59370932-59370951 | None:intergenic | 25.0% |
| !! | ATTTTTCTTCAATCAACAGT+TGG | - | chr5.3:59371132-59371151 | MS.gene71350:CDS | 25.0% |
| !! | CCTCTAATTGAATTGTTATT+TGG | + | chr5.3:59370687-59370706 | None:intergenic | 25.0% |
| !! | TATGCTTTTGCTAAAGATTT+TGG | - | chr5.3:59371604-59371623 | MS.gene71350:CDS | 25.0% |
| !! | TTTTCTGCAATACAAGTTTA+TGG | - | chr5.3:59370976-59370995 | MS.gene71350:intron | 25.0% |
| !! | TTTTTCTTCAATCAACAGTT+GGG | - | chr5.3:59371133-59371152 | MS.gene71350:CDS | 25.0% |
| AAAGACTTAGTTGTTCTATC+TGG | - | chr5.3:59371301-59371320 | MS.gene71350:intron | 30.0% | |
| AGCTGCTATAGCTAAAATAT+CGG | + | chr5.3:59370778-59370797 | None:intergenic | 30.0% | |
| AGTTGTGAGAAGTTGAAAAA+TGG | + | chr5.3:59371247-59371266 | None:intergenic | 30.0% | |
| ATCGAATAGATCACTTACTA+TGG | + | chr5.3:59370814-59370833 | None:intergenic | 30.0% | |
| GGAGTTTCTATGATTAAGAT+GGG | - | chr5.3:59371625-59371644 | MS.gene71350:CDS | 30.0% | |
| TGGAGTTTCTATGATTAAGA+TGG | - | chr5.3:59371624-59371643 | MS.gene71350:CDS | 30.0% | |
| TTATGACAGAATTTGTCCAA+AGG | - | chr5.3:59370265-59370284 | MS.gene71350:CDS | 30.0% | |
| ! | AATGCACTAACTTTAGAAAC+AGG | - | chr5.3:59371347-59371366 | MS.gene71350:intron | 30.0% |
| ! | ATCACAAATTTCAAGTCACA+TGG | - | chr5.3:59371268-59371287 | MS.gene71350:intron | 30.0% |
| ! | CAATTCAATTAGAGGTTTTG+AGG | - | chr5.3:59370692-59370711 | MS.gene71350:CDS | 30.0% |
| ! | TAGAATCAAATGGTGCTAAA+TGG | + | chr5.3:59371450-59371469 | None:intergenic | 30.0% |
| ! | TATTTTGTGTCAACTCTTGA+AGG | + | chr5.3:59371475-59371494 | None:intergenic | 30.0% |
| !! | AAGGCTTTGTTGTATAAACA+AGG | - | chr5.3:59371499-59371518 | MS.gene71350:intron | 30.0% |
| !! | GTTTCTAAAGTTAGTGCATT+TGG | + | chr5.3:59371347-59371366 | None:intergenic | 30.0% |
| !! | TTGCAAATTTGCTGCAAAAT+TGG | + | chr5.3:59371398-59371417 | None:intergenic | 30.0% |
| AAAGCTCTTGATCAGAATGA+AGG | + | chr5.3:59371528-59371547 | None:intergenic | 35.0% | |
| AGATTCAAGATTTGCAAGCA+GGG | - | chr5.3:59371195-59371214 | MS.gene71350:CDS | 35.0% | |
| CTTGAAGGAGTAGAATCAAA+TGG | + | chr5.3:59371460-59371479 | None:intergenic | 35.0% | |
| GTAACACTTGGTACCAATAT+TGG | + | chr5.3:59371165-59371184 | None:intergenic | 35.0% | |
| TGCAATGGTAGGACTAAAAA+TGG | + | chr5.3:59370228-59370247 | None:intergenic | 35.0% | |
| TGGTTCTCAAAGTGATAGAT+TGG | - | chr5.3:59371558-59371577 | MS.gene71350:CDS | 35.0% | |
| TGTGAGAAGTTGAAAAATGG+AGG | + | chr5.3:59371244-59371263 | None:intergenic | 35.0% | |
| TTACGTTAACAAAGCAGTCA+TGG | + | chr5.3:59370373-59370392 | None:intergenic | 35.0% | |
| TTATATTGCGGTCGCAATTA+GGG | + | chr5.3:59370875-59370894 | None:intergenic | 35.0% | |
| TTTATATTGCGGTCGCAATT+AGG | + | chr5.3:59370876-59370895 | None:intergenic | 35.0% | |
| TTTATGATTGGCAATGCCTT+TGG | + | chr5.3:59370284-59370303 | None:intergenic | 35.0% | |
| ! | GTAATTTGAAGCCTCTTACT+GGG | - | chr5.3:59371647-59371666 | MS.gene71350:CDS | 35.0% |
| ! | TATTGGTACCAAGTGTTACT+AGG | - | chr5.3:59371166-59371185 | MS.gene71350:CDS | 35.0% |
| ! | TCTGATCAAGAGCTTTTCAA+AGG | - | chr5.3:59371532-59371551 | MS.gene71350:CDS | 35.0% |
| ! | TGCAAAATTGGTGTCTATGT+TGG | + | chr5.3:59371386-59371405 | None:intergenic | 35.0% |
| AAGCCTCTTACTGGGAAAAA+GGG | - | chr5.3:59371655-59371674 | MS.gene71350:CDS | 40.0% | |
| AGTTGGGAGGTAACCAATAT+TGG | - | chr5.3:59371149-59371168 | MS.gene71350:CDS | 40.0% | |
| CTCTTCTTCCTAGTAACACT+TGG | + | chr5.3:59371177-59371196 | None:intergenic | 40.0% | |
| GAAGTTACCAAAGCTTGCAA+AGG | - | chr5.3:59370735-59370754 | MS.gene71350:intron | 40.0% | |
| GACTTAGTTGTTCTATCTGG+TGG | - | chr5.3:59371304-59371323 | MS.gene71350:intron | 40.0% | |
| GAGAAGTTGAAAAATGGAGG+AGG | + | chr5.3:59371241-59371260 | None:intergenic | 40.0% | |
| GAGATTCAAGATTTGCAAGC+AGG | - | chr5.3:59371194-59371213 | MS.gene71350:CDS | 40.0% | |
| TCTTCTCACCAATGAAGGTA+GGG | + | chr5.3:59370656-59370675 | None:intergenic | 40.0% | |
| TTCTTCAATCAACAGTTGGG+AGG | - | chr5.3:59371136-59371155 | MS.gene71350:CDS | 40.0% | |
| ! | ATTTGGAGTGAGCTTTGCAA+TGG | + | chr5.3:59370243-59370262 | None:intergenic | 40.0% |
| ! | CAAGAGCTTTTCAAAGGTGA+TGG | - | chr5.3:59371538-59371557 | MS.gene71350:CDS | 40.0% |
| ! | GGTAATTTGAAGCCTCTTAC+TGG | - | chr5.3:59371646-59371665 | MS.gene71350:CDS | 40.0% |
| AATTATTCGCGAACCACGCA+TGG | - | chr5.3:59370322-59370341 | MS.gene71350:CDS | 45.0% | |
| ATTATTCGCGAACCACGCAT+GGG | - | chr5.3:59370323-59370342 | MS.gene71350:CDS | 45.0% | |
| CTATCTGGTGGTCACACAAT+TGG | - | chr5.3:59371316-59371335 | MS.gene71350:intron | 45.0% | |
| CTTCTCACCAATGAAGGTAG+GGG | + | chr5.3:59370655-59370674 | None:intergenic | 45.0% | |
| GAACATTGTGAGCCTACACA+GGG | - | chr5.3:59370600-59370619 | MS.gene71350:CDS | 45.0% | |
| GAAGCCTCTTACTGGGAAAA+AGG | - | chr5.3:59371654-59371673 | MS.gene71350:CDS | 45.0% | |
| GACATCACCTTTGCAAGCTT+TGG | + | chr5.3:59370745-59370764 | None:intergenic | 45.0% | |
| GATGATACCCCTACCTTCAT+TGG | - | chr5.3:59370645-59370664 | MS.gene71350:CDS | 45.0% | |
| GTCTTCTCACCAATGAAGGT+AGG | + | chr5.3:59370657-59370676 | None:intergenic | 45.0% | |
| TGAACATTGTGAGCCTACAC+AGG | - | chr5.3:59370599-59370618 | MS.gene71350:CDS | 45.0% | |
| TGCAGTCTTCTCACCAATGA+AGG | + | chr5.3:59370661-59370680 | None:intergenic | 45.0% | |
| ! | TCACCCTTTTTCCCAGTAAG+AGG | + | chr5.3:59371661-59371680 | None:intergenic | 45.0% |
| CTGGGAAAAAGGGTGAGATC+AGG | - | chr5.3:59371665-59371684 | MS.gene71350:CDS | 50.0% | |
| GATCCATCACAACCCTGTGT+AGG | + | chr5.3:59370615-59370634 | None:intergenic | 50.0% | |
| GGAGTGAGCTTTGCAATGGT+AGG | + | chr5.3:59370239-59370258 | None:intergenic | 50.0% | |
| GAGCCTACACAGGGTTGTGA+TGG | - | chr5.3:59370609-59370628 | MS.gene71350:CDS | 55.0% | |
| !! | GGTCGTCGCTGCTGATTTGA+GGG | + | chr5.3:59371429-59371448 | None:intergenic | 55.0% |
| !! | TGGTCGTCGCTGCTGATTTG+AGG | + | chr5.3:59371430-59371449 | None:intergenic | 55.0% |
| AGCAACGATGCTCCCATGCG+TGG | + | chr5.3:59370338-59370357 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 59370173 | 59371717 | 59370173 | ID=MS.gene71350 |
| chr5.3 | mRNA | 59370173 | 59371717 | 59370173 | ID=MS.gene71350.t1;Parent=MS.gene71350 |
| chr5.3 | exon | 59371502 | 59371717 | 59371502 | ID=MS.gene71350.t1.exon1;Parent=MS.gene71350.t1 |
| chr5.3 | CDS | 59371502 | 59371717 | 59371502 | ID=cds.MS.gene71350.t1;Parent=MS.gene71350.t1 |
| chr5.3 | exon | 59371075 | 59371269 | 59371075 | ID=MS.gene71350.t1.exon2;Parent=MS.gene71350.t1 |
| chr5.3 | CDS | 59371075 | 59371269 | 59371075 | ID=cds.MS.gene71350.t1;Parent=MS.gene71350.t1 |
| chr5.3 | exon | 59370173 | 59370739 | 59370173 | ID=MS.gene71350.t1.exon3;Parent=MS.gene71350.t1 |
| chr5.3 | CDS | 59370173 | 59370739 | 59370173 | ID=cds.MS.gene71350.t1;Parent=MS.gene71350.t1 |
| Gene Sequence |
| Protein sequence |
