Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051440.t1 | RHN79734.1 | 94.2 | 515 | 30 | 0 | 1 | 515 | 70 | 584 | 1.30E-276 | 961.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051440.t1 | Q9M0X9 | 56.6 | 505 | 208 | 6 | 13 | 515 | 12 | 507 | 5.5e-156 | 552.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051440.t1 | A0A072VL68 | 94.2 | 515 | 30 | 0 | 1 | 515 | 1 | 515 | 9.1e-277 | 961.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051138 | MS.gene051440 | 0.805099 | 1.57E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene052211 | 0.803178 | 3.95E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene052606 | 0.814619 | 1.40E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene05470 | -0.802672 | 5.02E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene055240 | 0.805013 | 1.64E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene056218 | 0.805022 | 1.63E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene056224 | 0.803317 | 3.69E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene056748 | 0.809336 | 1.99E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene057768 | 0.814315 | 1.64E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene058603 | 0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene060087 | 0.800768 | 1.23E-48 | -1.69E-46 |
| MS.gene051440 | MS.gene061044 | 0.819556 | 1.09E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene061683 | 0.820757 | 5.79E-53 | -1.69E-46 |
| MS.gene051440 | MS.gene061777 | 0.818042 | 2.41E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene061889 | 0.816332 | 5.84E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene063148 | 0.827567 | 1.46E-54 | -1.69E-46 |
| MS.gene051440 | MS.gene063436 | 0.800544 | 1.37E-48 | -1.69E-46 |
| MS.gene051440 | MS.gene065424 | 0.820601 | 6.29E-53 | -1.69E-46 |
| MS.gene051440 | MS.gene065466 | 0.83904 | 2.01E-57 | -1.69E-46 |
| MS.gene051440 | MS.gene065973 | 0.826968 | 2.03E-54 | -1.69E-46 |
| MS.gene051440 | MS.gene066602 | 0.815241 | 1.02E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene068585 | 0.805328 | 1.41E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene068633 | 0.804569 | 2.03E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene068638 | 0.80065 | 1.30E-48 | -1.69E-46 |
| MS.gene051440 | MS.gene069166 | 0.804584 | 2.01E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene07042 | 0.814139 | 1.79E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene072293 | 0.820892 | 5.40E-53 | -1.69E-46 |
| MS.gene051440 | MS.gene072376 | 0.815646 | 8.31E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene072664 | 0.808007 | 3.83E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene073526 | 0.814671 | 1.37E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene08238 | 0.8054 | 1.36E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene08658 | 0.813392 | 2.62E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene08918 | 0.802526 | 5.38E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene08919 | 0.804008 | 2.65E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene09072 | 0.821983 | 3.02E-53 | -1.69E-46 |
| MS.gene051440 | MS.gene09884 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene051440 | MS.gene21274 | 0.820719 | 5.91E-53 | -1.69E-46 |
| MS.gene051440 | MS.gene22359 | 0.809913 | 1.50E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene24521 | 0.802962 | 4.37E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene24522 | 0.802092 | 6.61E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene26474 | 0.823787 | 1.15E-53 | -1.69E-46 |
| MS.gene051440 | MS.gene26475 | 0.824807 | 6.61E-54 | -1.69E-46 |
| MS.gene051440 | MS.gene27790 | 0.803842 | 2.87E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene28077 | 0.819938 | 8.93E-53 | -1.69E-46 |
| MS.gene051440 | MS.gene28290 | 0.816056 | 6.73E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene28802 | 0.817089 | 3.95E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene30459 | 0.810015 | 1.42E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene34140 | 0.804252 | 2.36E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene35208 | 0.808864 | 2.51E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene37317 | 0.802769 | 4.79E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene38435 | 0.800713 | 1.27E-48 | -1.69E-46 |
| MS.gene051440 | MS.gene41367 | 0.815712 | 8.03E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene42519 | 0.803426 | 3.51E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene44439 | -0.803371 | 3.60E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene45607 | -0.81291 | 3.34E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene45887 | 0.828669 | 7.91E-55 | -1.69E-46 |
| MS.gene051440 | MS.gene47437 | 0.813355 | 2.67E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene47719 | 0.806558 | 7.76E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene48023 | 0.800799 | 1.22E-48 | -1.69E-46 |
| MS.gene051440 | MS.gene48885 | 0.810876 | 9.27E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene50279 | 0.82038 | 7.07E-53 | -1.69E-46 |
| MS.gene051440 | MS.gene54667 | 0.805705 | 1.17E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene55012 | 0.830728 | 2.49E-55 | -1.69E-46 |
| MS.gene051440 | MS.gene55078 | 0.817073 | 3.98E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene55899 | 0.814015 | 1.91E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene56554 | 0.809515 | 1.82E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene57291 | 0.816694 | 4.85E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene59765 | 0.800457 | 1.43E-48 | -1.69E-46 |
| MS.gene051440 | MS.gene60176 | -0.807113 | 5.92E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene60177 | -0.813636 | 2.32E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene61144 | -0.813188 | 2.90E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene63642 | 0.829853 | 4.08E-55 | -1.69E-46 |
| MS.gene051440 | MS.gene65040 | 0.819395 | 1.19E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene68203 | 0.818102 | 2.34E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene69635 | 0.843946 | 1.02E-58 | -1.69E-46 |
| MS.gene051440 | MS.gene71350 | 0.807073 | 6.04E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene72323 | 0.800989 | 1.11E-48 | -1.69E-46 |
| MS.gene051440 | MS.gene76536 | 0.802738 | 4.86E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene77814 | 0.802486 | 5.48E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene79630 | 0.806616 | 7.54E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene80744 | 0.826382 | 2.80E-54 | -1.69E-46 |
| MS.gene051440 | MS.gene81504 | 0.808757 | 2.65E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene81505 | 0.813173 | 2.93E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene81506 | 0.811835 | 5.74E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene81725 | 0.811091 | 8.33E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene81981 | 0.813536 | 2.44E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene82778 | 0.808656 | 2.78E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene85152 | 0.812495 | 4.12E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene85496 | 0.829696 | 4.46E-55 | -1.69E-46 |
| MS.gene051440 | MS.gene88597 | 0.833336 | 5.66E-56 | -1.69E-46 |
| MS.gene051440 | MS.gene89355 | 0.805351 | 1.39E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene90819 | 0.804882 | 1.74E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene91317 | 0.800662 | 1.30E-48 | -1.69E-46 |
| MS.gene051440 | MS.gene95132 | 0.819872 | 9.24E-53 | -1.69E-46 |
| MS.gene051440 | MS.gene96226 | 0.801674 | 8.06E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene96299 | 0.802511 | 5.42E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene96948 | 0.817142 | 3.84E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene97258 | 0.800273 | 1.56E-48 | -1.69E-46 |
| MS.gene051440 | MS.gene97259 | 0.803219 | 3.87E-49 | -1.69E-46 |
| MS.gene051440 | MS.gene98272 | 0.811131 | 8.16E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene98480 | 0.842841 | 2.02E-58 | -1.69E-46 |
| MS.gene051440 | MS.gene99062 | 0.818281 | 2.13E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051440.t1 | MTR_1g063120 | 94.175 | 515 | 30 | 0 | 1 | 515 | 1 | 515 | 0.0 | 986 |
| MS.gene051440.t1 | MTR_1g063110 | 77.606 | 518 | 106 | 2 | 1 | 515 | 1 | 511 | 0.0 | 810 |
| MS.gene051440.t1 | MTR_4g057730 | 56.693 | 508 | 201 | 6 | 13 | 515 | 12 | 505 | 0.0 | 567 |
| MS.gene051440.t1 | MTR_2g095510 | 53.663 | 505 | 218 | 6 | 13 | 515 | 12 | 502 | 0.0 | 523 |
| MS.gene051440.t1 | MTR_4g057730 | 56.329 | 474 | 188 | 6 | 13 | 481 | 12 | 471 | 0.0 | 523 |
| MS.gene051440.t1 | MTR_4g057730 | 55.088 | 452 | 184 | 6 | 13 | 459 | 12 | 449 | 8.68e-169 | 485 |
| MS.gene051440.t1 | MTR_2g095510 | 50.780 | 449 | 205 | 6 | 13 | 459 | 12 | 446 | 4.97e-150 | 437 |
| MS.gene051440.t1 | MTR_1g026310 | 42.970 | 505 | 278 | 6 | 13 | 515 | 27 | 523 | 3.69e-129 | 388 |
| MS.gene051440.t1 | MTR_8g039720 | 44.055 | 513 | 267 | 11 | 13 | 515 | 24 | 526 | 2.93e-126 | 380 |
| MS.gene051440.t1 | MTR_5g027480 | 37.885 | 520 | 292 | 8 | 6 | 515 | 20 | 518 | 1.36e-116 | 355 |
| MS.gene051440.t1 | MTR_5g027500 | 37.879 | 528 | 297 | 10 | 4 | 515 | 19 | 531 | 1.88e-110 | 340 |
| MS.gene051440.t1 | MTR_4g128337 | 41.071 | 504 | 272 | 11 | 20 | 515 | 25 | 511 | 1.11e-109 | 337 |
| MS.gene051440.t1 | MTR_1g090737 | 39.655 | 522 | 290 | 11 | 3 | 515 | 24 | 529 | 3.02e-109 | 337 |
| MS.gene051440.t1 | MTR_5g007640 | 39.335 | 511 | 272 | 11 | 21 | 515 | 62 | 550 | 5.66e-108 | 334 |
| MS.gene051440.t1 | MTR_2g105570 | 37.548 | 522 | 309 | 9 | 1 | 515 | 1 | 512 | 3.27e-105 | 326 |
| MS.gene051440.t1 | MTR_3g088870 | 39.484 | 504 | 263 | 13 | 24 | 515 | 48 | 521 | 1.36e-104 | 324 |
| MS.gene051440.t1 | MTR_4g077900 | 40.659 | 455 | 247 | 9 | 69 | 515 | 2 | 441 | 3.43e-104 | 321 |
| MS.gene051440.t1 | MTR_1g073180 | 42.254 | 497 | 251 | 11 | 27 | 515 | 51 | 519 | 1.85e-103 | 321 |
| MS.gene051440.t1 | MTR_1g073180 | 42.254 | 497 | 251 | 11 | 27 | 515 | 29 | 497 | 4.23e-103 | 320 |
| MS.gene051440.t1 | MTR_4g005750 | 39.721 | 501 | 271 | 12 | 27 | 515 | 24 | 505 | 9.58e-100 | 311 |
| MS.gene051440.t1 | MTR_3g088880 | 38.415 | 492 | 269 | 10 | 32 | 515 | 54 | 519 | 1.45e-98 | 309 |
| MS.gene051440.t1 | MTR_3g460770 | 33.333 | 519 | 321 | 10 | 6 | 518 | 8 | 507 | 3.14e-92 | 292 |
| MS.gene051440.t1 | MTR_1g026470 | 38.601 | 386 | 227 | 6 | 13 | 396 | 27 | 404 | 2.71e-73 | 238 |
| MS.gene051440.t1 | MTR_1g026430 | 38.381 | 383 | 226 | 6 | 13 | 393 | 27 | 401 | 1.95e-72 | 236 |
| MS.gene051440.t1 | MTR_1569s0010 | 28.112 | 466 | 300 | 13 | 56 | 495 | 22 | 478 | 6.85e-43 | 160 |
| MS.gene051440.t1 | MTR_3g035130 | 28.814 | 472 | 298 | 13 | 53 | 511 | 28 | 474 | 6.45e-40 | 152 |
| MS.gene051440.t1 | MTR_0803s0020 | 28.118 | 473 | 307 | 11 | 58 | 518 | 263 | 714 | 6.69e-40 | 155 |
| MS.gene051440.t1 | MTR_3g035130 | 29.103 | 457 | 286 | 13 | 53 | 496 | 28 | 459 | 2.23e-39 | 149 |
| MS.gene051440.t1 | MTR_2g030240 | 27.083 | 480 | 298 | 12 | 44 | 495 | 21 | 476 | 1.29e-37 | 145 |
| MS.gene051440.t1 | MTR_3g064420 | 25.376 | 532 | 333 | 17 | 28 | 520 | 14 | 520 | 1.05e-31 | 129 |
| MS.gene051440.t1 | MTR_5g008820 | 26.357 | 516 | 325 | 19 | 28 | 515 | 14 | 502 | 1.32e-31 | 128 |
| MS.gene051440.t1 | MTR_2g044180 | 25.709 | 494 | 322 | 14 | 57 | 518 | 47 | 527 | 1.51e-31 | 128 |
| MS.gene051440.t1 | MTR_5g076240 | 26.577 | 523 | 334 | 13 | 11 | 508 | 1 | 498 | 1.91e-31 | 128 |
| MS.gene051440.t1 | MTR_2g030240 | 27.726 | 321 | 195 | 7 | 198 | 495 | 76 | 382 | 3.48e-31 | 126 |
| MS.gene051440.t1 | MTR_4g013210 | 29.167 | 336 | 206 | 11 | 192 | 510 | 219 | 539 | 3.60e-30 | 124 |
| MS.gene051440.t1 | MTR_4g013210 | 29.167 | 336 | 206 | 11 | 192 | 510 | 67 | 387 | 4.20e-30 | 122 |
| MS.gene051440.t1 | MTR_2g044180 | 29.167 | 336 | 211 | 10 | 201 | 518 | 110 | 436 | 9.06e-30 | 122 |
| MS.gene051440.t1 | MTR_4g057755 | 67.532 | 77 | 25 | 0 | 404 | 480 | 42 | 118 | 2.25e-29 | 112 |
| MS.gene051440.t1 | MTR_5g076220 | 27.505 | 509 | 318 | 17 | 28 | 508 | 14 | 499 | 4.10e-29 | 121 |
| MS.gene051440.t1 | MTR_8g074040 | 27.778 | 468 | 281 | 16 | 60 | 495 | 86 | 528 | 1.34e-28 | 120 |
| MS.gene051440.t1 | MTR_5g008800 | 25.514 | 486 | 313 | 12 | 57 | 515 | 41 | 504 | 4.96e-28 | 118 |
| MS.gene051440.t1 | MTR_1g104810 | 25.142 | 529 | 311 | 20 | 9 | 469 | 57 | 568 | 1.16e-27 | 117 |
| MS.gene051440.t1 | MTR_7g084850 | 23.171 | 492 | 330 | 13 | 56 | 512 | 203 | 681 | 1.46e-27 | 117 |
| MS.gene051440.t1 | MTR_1g104810 | 25.470 | 479 | 282 | 18 | 49 | 469 | 40 | 501 | 7.02e-27 | 115 |
| MS.gene051440.t1 | MTR_4g011790 | 28.135 | 327 | 200 | 10 | 192 | 496 | 224 | 537 | 7.79e-27 | 115 |
| MS.gene051440.t1 | MTR_4g011790 | 25.673 | 483 | 316 | 16 | 39 | 496 | 73 | 537 | 1.13e-26 | 114 |
| MS.gene051440.t1 | MTR_0161s0050 | 27.429 | 525 | 328 | 18 | 28 | 520 | 14 | 517 | 2.18e-26 | 113 |
| MS.gene051440.t1 | MTR_4g011790 | 25.000 | 492 | 317 | 17 | 39 | 496 | 73 | 546 | 2.95e-25 | 110 |
| MS.gene051440.t1 | MTR_1g026350 | 44.186 | 129 | 70 | 1 | 13 | 141 | 27 | 153 | 6.02e-25 | 101 |
| MS.gene051440.t1 | MTR_4g121600 | 23.800 | 521 | 354 | 15 | 29 | 518 | 19 | 527 | 1.42e-24 | 107 |
| MS.gene051440.t1 | MTR_5g076200 | 26.916 | 509 | 321 | 18 | 28 | 508 | 14 | 499 | 2.50e-24 | 107 |
| MS.gene051440.t1 | MTR_1g086600 | 24.830 | 588 | 322 | 22 | 23 | 515 | 58 | 620 | 6.19e-23 | 103 |
| MS.gene051440.t1 | MTR_7g109830 | 24.859 | 531 | 306 | 22 | 23 | 479 | 36 | 547 | 1.27e-22 | 102 |
| MS.gene051440.t1 | MTR_8g074040 | 26.977 | 430 | 257 | 16 | 98 | 495 | 6 | 410 | 1.34e-22 | 101 |
| MS.gene051440.t1 | MTR_5g023730 | 23.183 | 509 | 354 | 17 | 28 | 515 | 16 | 508 | 2.95e-22 | 100 |
| MS.gene051440.t1 | MTR_4g013210 | 26.524 | 328 | 184 | 12 | 192 | 510 | 219 | 498 | 5.44e-22 | 99.8 |
| MS.gene051440.t1 | MTR_4g013210 | 26.752 | 314 | 180 | 11 | 192 | 496 | 67 | 339 | 5.91e-22 | 98.6 |
| MS.gene051440.t1 | MTR_2g098490 | 28.451 | 355 | 204 | 15 | 157 | 478 | 617 | 954 | 8.48e-22 | 100 |
| MS.gene051440.t1 | MTR_8g074120 | 24.886 | 438 | 286 | 13 | 83 | 495 | 20 | 439 | 8.95e-22 | 99.0 |
| MS.gene051440.t1 | MTR_5g009360 | 24.356 | 505 | 287 | 21 | 47 | 479 | 68 | 549 | 9.63e-21 | 96.3 |
| MS.gene051440.t1 | MTR_5g009350 | 23.883 | 515 | 267 | 21 | 47 | 474 | 68 | 544 | 3.58e-20 | 94.4 |
| MS.gene051440.t1 | MTR_5g009350 | 23.883 | 515 | 267 | 21 | 47 | 474 | 68 | 544 | 3.66e-20 | 94.4 |
| MS.gene051440.t1 | MTR_5g009350 | 23.846 | 520 | 271 | 21 | 47 | 479 | 68 | 549 | 4.52e-20 | 94.4 |
| MS.gene051440.t1 | MTR_5g009350 | 23.846 | 520 | 271 | 21 | 47 | 479 | 68 | 549 | 5.00e-20 | 94.0 |
| MS.gene051440.t1 | MTR_5g009360 | 26.197 | 355 | 199 | 14 | 178 | 479 | 79 | 423 | 6.40e-20 | 93.2 |
| MS.gene051440.t1 | MTR_4g066130 | 25.723 | 311 | 200 | 10 | 195 | 478 | 651 | 957 | 1.14e-18 | 90.5 |
| MS.gene051440.t1 | MTR_3g082660 | 23.935 | 493 | 283 | 18 | 54 | 470 | 135 | 611 | 6.26e-18 | 87.8 |
| MS.gene051440.t1 | MTR_8g099420 | 23.742 | 497 | 284 | 21 | 45 | 470 | 69 | 541 | 7.28e-18 | 87.4 |
| MS.gene051440.t1 | MTR_1g034360 | 23.308 | 532 | 291 | 21 | 33 | 479 | 49 | 548 | 3.90e-17 | 85.1 |
| MS.gene051440.t1 | MTR_4g013210 | 26.132 | 287 | 162 | 11 | 192 | 469 | 219 | 464 | 1.08e-16 | 83.2 |
| MS.gene051440.t1 | MTR_8g083170 | 27.966 | 236 | 136 | 7 | 305 | 515 | 445 | 671 | 3.08e-16 | 82.4 |
| MS.gene051440.t1 | MTR_4g068670 | 21.429 | 504 | 297 | 19 | 48 | 479 | 70 | 546 | 2.08e-15 | 79.7 |
| MS.gene051440.t1 | MTR_4g013210 | 28.807 | 243 | 149 | 9 | 192 | 418 | 219 | 453 | 3.29e-15 | 78.6 |
| MS.gene051440.t1 | MTR_3g084470 | 26.768 | 198 | 119 | 4 | 340 | 515 | 469 | 662 | 1.20e-13 | 73.9 |
| MS.gene051440.t1 | MTR_3g088890 | 49.180 | 61 | 31 | 0 | 455 | 515 | 11 | 71 | 2.37e-13 | 66.2 |
| MS.gene051440.t1 | MTR_1g030290 | 32.335 | 167 | 94 | 7 | 321 | 476 | 427 | 585 | 1.34e-12 | 70.9 |
| MS.gene051440.t1 | MTR_3g084450 | 29.375 | 160 | 98 | 3 | 344 | 492 | 269 | 424 | 1.52e-12 | 70.1 |
| MS.gene051440.t1 | MTR_3g084450 | 29.375 | 160 | 98 | 3 | 344 | 492 | 477 | 632 | 3.27e-12 | 69.7 |
| MS.gene051440.t1 | MTR_3g087980 | 28.155 | 206 | 134 | 6 | 55 | 252 | 105 | 304 | 4.77e-12 | 68.9 |
| MS.gene051440.t1 | MTR_3g087980 | 30.539 | 167 | 97 | 7 | 321 | 476 | 425 | 583 | 1.01e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051440.t1 | AT4G05160 | 56.634 | 505 | 208 | 6 | 13 | 515 | 12 | 507 | 0.0 | 571 |
| MS.gene051440.t1 | AT1G20510 | 41.553 | 515 | 287 | 6 | 2 | 515 | 6 | 507 | 2.01e-129 | 388 |
| MS.gene051440.t1 | AT1G20480 | 42.278 | 518 | 285 | 10 | 3 | 517 | 24 | 530 | 4.03e-123 | 372 |
| MS.gene051440.t1 | AT4G19010 | 40.848 | 519 | 280 | 11 | 6 | 515 | 25 | 525 | 2.78e-121 | 368 |
| MS.gene051440.t1 | AT1G20500 | 41.699 | 518 | 280 | 9 | 3 | 515 | 13 | 513 | 3.24e-120 | 364 |
| MS.gene051440.t1 | AT1G20510 | 41.164 | 481 | 269 | 6 | 2 | 481 | 6 | 473 | 2.65e-117 | 354 |
| MS.gene051440.t1 | AT5G38120 | 38.432 | 523 | 289 | 11 | 3 | 515 | 14 | 513 | 1.53e-112 | 343 |
| MS.gene051440.t1 | AT5G38120 | 38.432 | 523 | 289 | 11 | 3 | 515 | 14 | 513 | 3.08e-112 | 344 |
| MS.gene051440.t1 | AT1G65060 | 39.800 | 500 | 283 | 8 | 20 | 515 | 42 | 527 | 1.60e-110 | 340 |
| MS.gene051440.t1 | AT3G21240 | 38.728 | 519 | 296 | 10 | 3 | 515 | 15 | 517 | 2.43e-106 | 329 |
| MS.gene051440.t1 | AT1G20510 | 39.434 | 459 | 264 | 6 | 2 | 459 | 6 | 451 | 2.08e-103 | 318 |
| MS.gene051440.t1 | AT5G63380 | 37.547 | 530 | 286 | 15 | 6 | 515 | 17 | 521 | 2.51e-103 | 321 |
| MS.gene051440.t1 | AT5G38120 | 38.650 | 489 | 267 | 11 | 3 | 481 | 14 | 479 | 1.83e-102 | 316 |
| MS.gene051440.t1 | AT5G38120 | 38.650 | 489 | 267 | 11 | 3 | 481 | 14 | 479 | 1.83e-102 | 316 |
| MS.gene051440.t1 | AT3G21230 | 39.608 | 510 | 271 | 13 | 26 | 515 | 39 | 531 | 1.71e-97 | 306 |
| MS.gene051440.t1 | AT3G21230 | 39.608 | 510 | 271 | 13 | 26 | 515 | 39 | 531 | 4.14e-97 | 305 |
| MS.gene051440.t1 | AT1G51680 | 38.889 | 504 | 280 | 11 | 26 | 515 | 35 | 524 | 2.70e-96 | 302 |
| MS.gene051440.t1 | AT1G51680 | 39.087 | 504 | 279 | 12 | 26 | 515 | 35 | 524 | 4.40e-96 | 302 |
| MS.gene051440.t1 | AT3G21240 | 37.397 | 484 | 281 | 10 | 3 | 480 | 15 | 482 | 5.86e-92 | 290 |
| MS.gene051440.t1 | AT3G21240 | 37.397 | 484 | 281 | 10 | 3 | 480 | 15 | 482 | 5.86e-92 | 290 |
| MS.gene051440.t1 | AT1G62940 | 34.132 | 501 | 304 | 10 | 21 | 513 | 19 | 501 | 4.25e-85 | 273 |
| MS.gene051440.t1 | AT3G21230 | 38.737 | 475 | 254 | 13 | 26 | 480 | 39 | 496 | 6.15e-85 | 271 |
| MS.gene051440.t1 | AT1G65060 | 36.504 | 452 | 257 | 9 | 20 | 461 | 42 | 473 | 1.49e-84 | 270 |
| MS.gene051440.t1 | AT1G51680 | 37.953 | 469 | 263 | 11 | 26 | 480 | 35 | 489 | 1.10e-82 | 265 |
| MS.gene051440.t1 | AT1G20490 | 36.977 | 430 | 251 | 11 | 3 | 427 | 13 | 427 | 1.02e-76 | 248 |
| MS.gene051440.t1 | AT1G20490 | 36.977 | 430 | 251 | 11 | 3 | 427 | 13 | 427 | 1.02e-76 | 248 |
| MS.gene051440.t1 | AT3G21230 | 34.568 | 405 | 228 | 13 | 26 | 410 | 39 | 426 | 2.93e-48 | 173 |
| MS.gene051440.t1 | AT3G48990 | 30.223 | 493 | 316 | 10 | 29 | 514 | 5 | 476 | 4.93e-45 | 166 |
| MS.gene051440.t1 | AT1G30520 | 29.158 | 463 | 290 | 13 | 57 | 495 | 34 | 482 | 9.62e-41 | 155 |
| MS.gene051440.t1 | AT1G30520 | 29.158 | 463 | 290 | 13 | 57 | 495 | 34 | 482 | 9.62e-41 | 155 |
| MS.gene051440.t1 | AT1G77240 | 27.059 | 510 | 327 | 11 | 28 | 511 | 14 | 504 | 3.55e-35 | 139 |
| MS.gene051440.t1 | AT1G21540 | 27.489 | 462 | 298 | 13 | 74 | 511 | 61 | 509 | 8.56e-35 | 137 |
| MS.gene051440.t1 | AT1G21530 | 26.709 | 468 | 291 | 16 | 74 | 511 | 61 | 506 | 4.64e-34 | 135 |
| MS.gene051440.t1 | AT1G21530 | 26.170 | 470 | 293 | 15 | 74 | 511 | 61 | 508 | 5.51e-34 | 135 |
| MS.gene051440.t1 | AT1G30520 | 27.703 | 444 | 280 | 14 | 57 | 476 | 34 | 460 | 8.39e-34 | 134 |
| MS.gene051440.t1 | AT1G30520 | 27.703 | 444 | 280 | 14 | 57 | 476 | 34 | 460 | 8.39e-34 | 134 |
| MS.gene051440.t1 | AT1G65880 | 24.953 | 529 | 334 | 16 | 21 | 515 | 11 | 510 | 1.11e-32 | 132 |
| MS.gene051440.t1 | AT1G76290 | 27.097 | 465 | 287 | 14 | 57 | 495 | 41 | 479 | 4.89e-32 | 129 |
| MS.gene051440.t1 | AT3G16170 | 26.130 | 509 | 319 | 19 | 35 | 510 | 72 | 556 | 9.50e-32 | 129 |
| MS.gene051440.t1 | AT1G65890 | 24.668 | 527 | 337 | 16 | 21 | 515 | 11 | 509 | 1.54e-31 | 128 |
| MS.gene051440.t1 | AT1G20560 | 25.294 | 510 | 336 | 14 | 28 | 511 | 16 | 506 | 6.26e-31 | 126 |
| MS.gene051440.t1 | AT1G66120 | 25.247 | 507 | 321 | 14 | 21 | 496 | 11 | 490 | 4.18e-29 | 121 |
| MS.gene051440.t1 | AT5G16370 | 27.022 | 507 | 321 | 19 | 26 | 506 | 12 | 495 | 1.49e-27 | 116 |
| MS.gene051440.t1 | AT1G68270 | 24.330 | 522 | 315 | 15 | 21 | 515 | 11 | 479 | 1.66e-27 | 116 |
| MS.gene051440.t1 | AT5G16340 | 25.670 | 522 | 331 | 18 | 26 | 515 | 12 | 508 | 1.85e-26 | 113 |
| MS.gene051440.t1 | AT5G36880 | 23.457 | 486 | 336 | 12 | 56 | 512 | 148 | 626 | 1.91e-26 | 114 |
| MS.gene051440.t1 | AT5G36880 | 23.457 | 486 | 336 | 12 | 56 | 512 | 148 | 626 | 1.91e-26 | 114 |
| MS.gene051440.t1 | AT5G36880 | 23.457 | 486 | 336 | 12 | 56 | 512 | 148 | 626 | 1.91e-26 | 114 |
| MS.gene051440.t1 | AT5G36880 | 23.457 | 486 | 336 | 12 | 56 | 512 | 148 | 626 | 1.91e-26 | 114 |
| MS.gene051440.t1 | AT5G36880 | 23.457 | 486 | 336 | 12 | 56 | 512 | 198 | 676 | 2.54e-26 | 114 |
| MS.gene051440.t1 | AT5G36880 | 23.348 | 454 | 312 | 12 | 56 | 480 | 148 | 594 | 3.64e-26 | 112 |
| MS.gene051440.t1 | AT5G27600 | 23.640 | 533 | 310 | 19 | 9 | 467 | 60 | 569 | 3.99e-26 | 113 |
| MS.gene051440.t1 | AT1G75960 | 25.049 | 511 | 346 | 16 | 28 | 518 | 14 | 507 | 8.33e-25 | 108 |
| MS.gene051440.t1 | AT1G64400 | 26.626 | 492 | 268 | 24 | 47 | 467 | 69 | 538 | 1.14e-24 | 108 |
| MS.gene051440.t1 | AT3G16910 | 23.319 | 476 | 335 | 11 | 57 | 511 | 49 | 515 | 4.12e-24 | 106 |
| MS.gene051440.t1 | AT2G47240 | 25.992 | 504 | 280 | 22 | 47 | 479 | 66 | 547 | 7.30e-24 | 105 |
| MS.gene051440.t1 | AT2G47240 | 25.992 | 504 | 280 | 22 | 47 | 479 | 66 | 547 | 7.30e-24 | 105 |
| MS.gene051440.t1 | AT2G47240 | 25.992 | 504 | 280 | 22 | 47 | 479 | 66 | 547 | 7.30e-24 | 105 |
| MS.gene051440.t1 | AT2G47240 | 25.992 | 504 | 280 | 22 | 47 | 479 | 7 | 488 | 9.86e-24 | 105 |
| MS.gene051440.t1 | AT1G20560 | 24.714 | 437 | 286 | 13 | 98 | 508 | 6 | 425 | 9.95e-24 | 104 |
| MS.gene051440.t1 | AT4G23850 | 25.971 | 489 | 275 | 23 | 47 | 467 | 69 | 538 | 6.48e-23 | 103 |
| MS.gene051440.t1 | AT1G49430 | 25.188 | 532 | 308 | 23 | 20 | 479 | 38 | 551 | 2.66e-22 | 101 |
| MS.gene051440.t1 | AT2G17650 | 24.858 | 527 | 346 | 16 | 17 | 511 | 53 | 561 | 3.12e-22 | 100 |
| MS.gene051440.t1 | AT3G05970 | 27.900 | 319 | 173 | 13 | 195 | 467 | 262 | 569 | 3.78e-21 | 97.8 |
| MS.gene051440.t1 | AT4G11030 | 24.200 | 500 | 270 | 22 | 47 | 467 | 69 | 538 | 5.49e-21 | 97.1 |
| MS.gene051440.t1 | AT2G04350 | 24.908 | 542 | 303 | 24 | 25 | 483 | 97 | 617 | 4.02e-19 | 91.3 |
| MS.gene051440.t1 | AT2G04350 | 24.908 | 542 | 303 | 24 | 25 | 483 | 97 | 617 | 4.02e-19 | 91.3 |
| MS.gene051440.t1 | AT3G23790 | 28.440 | 218 | 134 | 6 | 286 | 490 | 423 | 631 | 1.50e-16 | 83.6 |
| MS.gene051440.t1 | AT3G23790 | 29.921 | 254 | 153 | 12 | 14 | 248 | 68 | 315 | 9.79e-13 | 71.2 |
| MS.gene051440.t1 | AT4G14070 | 28.910 | 211 | 127 | 7 | 319 | 515 | 473 | 674 | 1.06e-13 | 74.3 |
| MS.gene051440.t1 | AT4G14070 | 29.064 | 203 | 122 | 7 | 37 | 220 | 106 | 305 | 4.43e-12 | 69.3 |
| MS.gene051440.t1 | AT1G77590 | 30.455 | 220 | 115 | 9 | 268 | 476 | 243 | 435 | 7.20e-13 | 71.2 |
| MS.gene051440.t1 | AT1G77590 | 30.455 | 220 | 115 | 9 | 268 | 476 | 389 | 581 | 1.04e-12 | 71.2 |
Find 160 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTGAATGATTTCAATTT+TGG | 0.042770 | 1.1:-47742147 | None:intergenic |
| CGAATCAATTAGGGGAAATT+TGG | 0.173843 | 1.1:+47743780 | MS.gene051440:CDS |
| TGAGAGCTCCGGCGAGTTTC+CGG | 0.212749 | 1.1:+47741680 | MS.gene051440:CDS |
| CCCCTTCCACCGAATCAATT+AGG | 0.246857 | 1.1:+47743770 | MS.gene051440:CDS |
| TGTCGGAGGTGGAGAAGTTT+AGG | 0.260977 | 1.1:+47741970 | MS.gene051440:CDS |
| GGAGCCTTCCTTTCGAATTC+AGG | 0.261357 | 1.1:+47743686 | MS.gene051440:CDS |
| GGGATCAGTGGGAAGGTTGA+TGG | 0.289930 | 1.1:-47741190 | None:intergenic |
| CGTCCAACCCTGATCATTAA+TGG | 0.305183 | 1.1:-47744031 | None:intergenic |
| CCCTTCCACCGAATCAATTA+GGG | 0.305642 | 1.1:+47743771 | MS.gene051440:CDS |
| GATCAGGGTTGGACGCTTAC+TGG | 0.310527 | 1.1:+47744039 | MS.gene051440:CDS |
| GCCCAAAATTGAAATCATTC+AGG | 0.312101 | 1.1:+47742145 | MS.gene051440:CDS |
| CTTTCGAATTCAGGTTCAAC+TGG | 0.317770 | 1.1:+47743695 | MS.gene051440:CDS |
| GAAAGGAAGGCTCCTTCCTT+TGG | 0.318775 | 1.1:-47743677 | None:intergenic |
| CATCCTGAAATTTCTGATGC+TGG | 0.321468 | 1.1:+47744344 | MS.gene051440:CDS |
| GCGGTTATTCTGTATTCTTC+AGG | 0.324135 | 1.1:+47741723 | MS.gene051440:CDS |
| GCTGGTGGTGCTGCTCCTCT+TGG | 0.326714 | 1.1:+47742089 | MS.gene051440:CDS |
| GTCGGAGGTGGAGAAGTTTA+GGG | 0.334634 | 1.1:+47741971 | MS.gene051440:CDS |
| CATGGCTGGTAGATTTGATT+TGG | 0.346754 | 1.1:+47741938 | MS.gene051440:CDS |
| ATGTTTGCAAACTAACAATC+TGG | 0.348145 | 1.1:-47743742 | None:intergenic |
| CAAGCTTAGGCTTGGAGTCT+TGG | 0.350652 | 1.1:-47741503 | None:intergenic |
| CGCAATGGTGTCGGCGGCGG+AGG | 0.352268 | 1.1:-47741250 | None:intergenic |
| GAAGGAGGTTAGGGAGAGGT+TGG | 0.355494 | 1.1:-47741211 | None:intergenic |
| ACGGGTATGTTTCAAATGTT+TGG | 0.372054 | 1.1:+47741628 | MS.gene051440:CDS |
| AACTGGAACCTCGCCAGCTT+TGG | 0.373517 | 1.1:-47744466 | None:intergenic |
| ATTCAAACAGGAAGGAGGTT+AGG | 0.373674 | 1.1:-47741221 | None:intergenic |
| AGTTCGGAGACGGTGTATAA+TGG | 0.378827 | 1.1:-47741468 | None:intergenic |
| TGCGCTCGCTGATGCGCAAA+CGG | 0.381833 | 1.1:+47741269 | MS.gene051440:CDS |
| GAAGAATGTGTTCCTTTGTT+TGG | 0.382457 | 1.1:+47741842 | MS.gene051440:CDS |
| ATCCTGAAATTTCTGATGCT+GGG | 0.385883 | 1.1:+47744345 | MS.gene051440:CDS |
| GGATCAGTGGGAAGGTTGAT+GGG | 0.391325 | 1.1:-47741189 | None:intergenic |
| ACCTCGCCAGCTTTGGCATC+AGG | 0.394057 | 1.1:-47744459 | None:intergenic |
| TGGACGCTTACTGGCGATCT+TGG | 0.400624 | 1.1:+47744048 | MS.gene051440:CDS |
| CAAATTTCCCCTAATTGATT+CGG | 0.406286 | 1.1:-47743779 | None:intergenic |
| TTGGATTTGCTTAGTGAGTT+CGG | 0.411994 | 1.1:-47741484 | None:intergenic |
| AAAACAGACCATTAATGATC+AGG | 0.419353 | 1.1:+47744023 | MS.gene051440:CDS |
| ACGGGGAAACGTATGGAGTT+AGG | 0.429974 | 1.1:-47741396 | None:intergenic |
| GGGTAATTGTGGCAGGGGTA+TGG | 0.436534 | 1.1:+47743617 | MS.gene051440:intron |
| CAAGAAATTTGTAGCAAAAG+AGG | 0.438801 | 1.1:+47744536 | MS.gene051440:CDS |
| TAGGGAGAGGTTGGGATCAG+TGG | 0.439155 | 1.1:-47741202 | None:intergenic |
| GATAGCAGGAGTGGCGGATC+AGG | 0.441226 | 1.1:+47741803 | MS.gene051440:CDS |
| GAGCGCAATGGTGTCGGCGG+CGG | 0.443942 | 1.1:-47741253 | None:intergenic |
| GGAGAAGACTTTGTCGGAGG+TGG | 0.446387 | 1.1:+47741959 | MS.gene051440:CDS |
| AGGCACCACGGGGAAAAGTA+AGG | 0.446955 | 1.1:+47741743 | MS.gene051440:CDS |
| CGGAGGAAGTTGATTCAAAC+AGG | 0.447453 | 1.1:-47741233 | None:intergenic |
| CTGTATTCTTCAGGCACCAC+GGG | 0.450731 | 1.1:+47741732 | MS.gene051440:CDS |
| AAGAGTTGATCAAGTGCAAC+GGG | 0.452222 | 1.1:+47744115 | MS.gene051440:CDS |
| ATCTTACCTTGCATCATAAC+GGG | 0.452405 | 1.1:-47743812 | None:intergenic |
| TTCAAACAGGAAGGAGGTTA+GGG | 0.453577 | 1.1:-47741220 | None:intergenic |
| CCCTAATTGATTCGGTGGAA+GGG | 0.455832 | 1.1:-47743771 | None:intergenic |
| GAGCGAACAACAAAAGCAAC+TGG | 0.456215 | 1.1:-47744483 | None:intergenic |
| CTGGTGGTGCTGCTCCTCTT+GGG | 0.458317 | 1.1:+47742090 | MS.gene051440:CDS |
| TTCATAGCGACGGCGATAGC+AGG | 0.458927 | 1.1:+47741789 | MS.gene051440:CDS |
| ACCCCAGCATCAGAAATTTC+AGG | 0.460523 | 1.1:-47744347 | None:intergenic |
| GCGCTCGCTGATGCGCAAAC+GGG | 0.461203 | 1.1:+47741270 | MS.gene051440:CDS |
| GCGACGGCGAGGAAGCAGAC+GGG | 0.461447 | 1.1:-47741414 | None:intergenic |
| ATCAGCGAGCGCAATGGTGT+CGG | 0.463310 | 1.1:-47741259 | None:intergenic |
| AACATCGAAGGATTTGGCTT+AGG | 0.466436 | 1.1:+47741552 | MS.gene051440:CDS |
| CCCCTAATTGATTCGGTGGA+AGG | 0.472230 | 1.1:-47743772 | None:intergenic |
| AGCGGGAGAATGCGGAGACT+TGG | 0.473138 | 1.1:-47741323 | None:intergenic |
| GTTTGTTGCTCCGCCGGTGA+TGG | 0.473291 | 1.1:+47742004 | MS.gene051440:CDS |
| AGGGAGAGGTTGGGATCAGT+GGG | 0.473735 | 1.1:-47741201 | None:intergenic |
| GATACGGTTACAACAAGCTT+AGG | 0.480476 | 1.1:-47741516 | None:intergenic |
| CCTAATTGATTCGGTGGAAG+GGG | 0.482338 | 1.1:-47743770 | None:intergenic |
| TTCCTCGCCGTCGCCGCCAT+AGG | 0.482403 | 1.1:+47741423 | MS.gene051440:CDS |
| TCCGCCGGTGATGGTGGAGC+TGG | 0.483210 | 1.1:+47742013 | MS.gene051440:CDS |
| GGTGGTGGCAATAGCACCTA+TGG | 0.483726 | 1.1:-47741439 | None:intergenic |
| AGGGAACACGGTGGTGTCCA+TGG | 0.486518 | 1.1:+47741920 | MS.gene051440:CDS |
| TGATTTGGAGAAGACTTTGT+CGG | 0.488200 | 1.1:+47741953 | MS.gene051440:CDS |
| GGAAGGTTGATGGGTTGCCT+TGG | 0.492526 | 1.1:-47741180 | None:intergenic |
| ACGTCGGATTGTGAAACAAC+CGG | 0.492650 | 1.1:-47741699 | None:intergenic |
| TCGTCGCTGAAGCAGCTCGC+TGG | 0.496351 | 1.1:+47742071 | MS.gene051440:CDS |
| GCATTTGTTTGTTGCTCCGC+CGG | 0.499523 | 1.1:+47741998 | MS.gene051440:CDS |
| AATCTTACCTTGCATCATAA+CGG | 0.499576 | 1.1:-47743813 | None:intergenic |
| AACACGGTGGTGTCCATGGC+TGG | 0.507282 | 1.1:+47741924 | MS.gene051440:CDS |
| TCGCTGAAGCAGCTCGCTGG+TGG | 0.508603 | 1.1:+47742074 | MS.gene051440:CDS |
| CGGAGACTTGGATATTGAGT+TGG | 0.508615 | 1.1:-47741311 | None:intergenic |
| AGTAAGTCTTCGAGTTCAGC+AGG | 0.510884 | 1.1:-47744314 | None:intergenic |
| AGGTCTCCTGATGCCAAAGC+TGG | 0.516200 | 1.1:+47744453 | MS.gene051440:intron |
| ACAATCTGGGATTCTACACT+TGG | 0.519700 | 1.1:-47743728 | None:intergenic |
| GGTTACAACAAGCTTAGGCT+TGG | 0.520372 | 1.1:-47741511 | None:intergenic |
| TCCCGCTCATTGATCAGTCT+CGG | 0.520385 | 1.1:+47741339 | MS.gene051440:CDS |
| AGACTTGGATATTGAGTTGG+CGG | 0.522319 | 1.1:-47741308 | None:intergenic |
| TATTGCTTGACGATGAACCT+TGG | 0.523876 | 1.1:+47741586 | MS.gene051440:CDS |
| GGAGAGTTGTGTGAGAGCTC+CGG | 0.526470 | 1.1:+47741669 | MS.gene051440:CDS |
| AAGGAGGTTAGGGAGAGGTT+GGG | 0.532899 | 1.1:-47741210 | None:intergenic |
| TGTTGCTCCGCCGGTGATGG+TGG | 0.535849 | 1.1:+47742007 | MS.gene051440:CDS |
| TCCGAGACTGATCAATGAGC+GGG | 0.536005 | 1.1:-47741340 | None:intergenic |
| AATAGCACCTATGGCGGCGA+CGG | 0.536011 | 1.1:-47741430 | None:intergenic |
| CGACGGCGAGGAAGCAGACG+GGG | 0.540564 | 1.1:-47741413 | None:intergenic |
| GATGCATCACGTGATGGGAT+TGG | 0.541122 | 1.1:+47741869 | MS.gene051440:CDS |
| AGAGGTTGGGATCAGTGGGA+AGG | 0.542678 | 1.1:-47741197 | None:intergenic |
| GCTGGTCAAGCGGCGTGAGG+TGG | 0.543332 | 1.1:+47742031 | MS.gene051440:CDS |
| TCCTGATGCCAAAGCTGGCG+AGG | 0.543786 | 1.1:+47744458 | MS.gene051440:CDS |
| GGTGCCGATGCATCACGTGA+TGG | 0.544878 | 1.1:+47741863 | MS.gene051440:CDS |
| AATCCCATCACGTGATGCAT+CGG | 0.546519 | 1.1:-47741867 | None:intergenic |
| GTGCCGATGCATCACGTGAT+GGG | 0.546854 | 1.1:+47741864 | MS.gene051440:CDS |
| GGCGACGGCGAGGAAGCAGA+CGG | 0.550149 | 1.1:-47741415 | None:intergenic |
| TTGCTTAGTGAGTTCGGAGA+CGG | 0.551250 | 1.1:-47741478 | None:intergenic |
| GAAGCAGACGGGGAAACGTA+TGG | 0.553923 | 1.1:-47741403 | None:intergenic |
| ATTTCCCCTAATTGATTCGG+TGG | 0.554045 | 1.1:-47743776 | None:intergenic |
| TGTTTGCAAACTAACAATCT+GGG | 0.557056 | 1.1:-47743741 | None:intergenic |
| CAGTTGAACCTGAATTCGAA+AGG | 0.558487 | 1.1:-47743694 | None:intergenic |
| CAAATCAAATCTACCAGCCA+TGG | 0.559839 | 1.1:-47741937 | None:intergenic |
| CACCTATGGCGGCGACGGCG+AGG | 0.560140 | 1.1:-47741425 | None:intergenic |
| TTGACCAGCTCCACCATCAC+CGG | 0.560201 | 1.1:-47742017 | None:intergenic |
| GATGTATATGCGCTAGTCCA+AGG | 0.561168 | 1.1:-47741603 | None:intergenic |
| AAACAGACCATTAATGATCA+GGG | 0.568415 | 1.1:+47744024 | MS.gene051440:CDS |
| TTGCGCATCAGCGAGCGCAA+TGG | 0.568556 | 1.1:-47741265 | None:intergenic |
| GACGGTGTATAATGGACTGC+AGG | 0.574429 | 1.1:-47741460 | None:intergenic |
| TCCTGAAATTTCTGATGCTG+GGG | 0.576358 | 1.1:+47744346 | MS.gene051440:CDS |
| TTGGATATTGAGTTGGCGGA+AGG | 0.584253 | 1.1:-47741304 | None:intergenic |
| GGAGCTGGTCAAGCGGCGTG+AGG | 0.585465 | 1.1:+47742028 | MS.gene051440:CDS |
| AGCGAGCGCAATGGTGTCGG+CGG | 0.587907 | 1.1:-47741256 | None:intergenic |
| AGGGAGTGATGTTGACTCAC+GGG | 0.587908 | 1.1:+47741763 | MS.gene051440:CDS |
| TGAACCTGAATTCGAAAGGA+AGG | 0.588263 | 1.1:-47743690 | None:intergenic |
| AGCGACGGCGATAGCAGGAG+TGG | 0.594532 | 1.1:+47741794 | MS.gene051440:CDS |
| TCTGTATTCTTCAGGCACCA+CGG | 0.595773 | 1.1:+47741731 | MS.gene051440:CDS |
| AAAGAGTTGATCAAGTGCAA+CGG | 0.595964 | 1.1:+47744114 | MS.gene051440:CDS |
| GATCAATGAGCGGGAGAATG+CGG | 0.596525 | 1.1:-47741331 | None:intergenic |
| GCAGCTGAGGAGAGGGAACA+CGG | 0.604601 | 1.1:+47741908 | MS.gene051440:CDS |
| AGACCATTAATGATCAGGGT+TGG | 0.605610 | 1.1:+47744028 | MS.gene051440:CDS |
| ACCAGCTCCACCATCACCGG+CGG | 0.605994 | 1.1:-47742014 | None:intergenic |
| TGCATCAAATCTTTCCCAAG+AGG | 0.606362 | 1.1:-47742104 | None:intergenic |
| TAAGCTTGTTGTAACCGTAT+CGG | 0.606942 | 1.1:+47741518 | MS.gene051440:CDS |
| TGAAACAACCGGAAACTCGC+CGG | 0.607279 | 1.1:-47741688 | None:intergenic |
| TATACACGCAGCTGAGGAGA+GGG | 0.608385 | 1.1:+47741901 | MS.gene051440:CDS |
| GGCACCACGGGGAAAAGTAA+GGG | 0.608988 | 1.1:+47741744 | MS.gene051440:CDS |
| GTTGATGGGTTGCCTTGGTG+AGG | 0.610223 | 1.1:-47741175 | None:intergenic |
| CGAGGACCCGTTATGATGCA+AGG | 0.615447 | 1.1:+47743806 | MS.gene051440:CDS |
| AAAAGGACAACTATTTGTCG+TGG | 0.616636 | 1.1:+47744083 | MS.gene051440:CDS |
| GGAAGTTGATTCAAACAGGA+AGG | 0.618512 | 1.1:-47741229 | None:intergenic |
| AAGGGAGTGATGTTGACTCA+CGG | 0.619938 | 1.1:+47741762 | MS.gene051440:CDS |
| TGATATTATACACGCAGCTG+AGG | 0.621129 | 1.1:+47741895 | MS.gene051440:CDS |
| TTATACACGCAGCTGAGGAG+AGG | 0.622735 | 1.1:+47741900 | MS.gene051440:CDS |
| GATGCATCGGCACCAAACAA+AGG | 0.622737 | 1.1:-47741854 | None:intergenic |
| AGTTGATTCAAACAGGAAGG+AGG | 0.623392 | 1.1:-47741226 | None:intergenic |
| ACAGGAAGGAGGTTAGGGAG+AGG | 0.624175 | 1.1:-47741215 | None:intergenic |
| AAGCGGCGTGAGGTGGTGAG+CGG | 0.631498 | 1.1:+47742038 | MS.gene051440:CDS |
| TGATGGTGGAGCTGGTCAAG+CGG | 0.634922 | 1.1:+47742021 | MS.gene051440:CDS |
| GTATAATGGACTGCAGGTGG+TGG | 0.636257 | 1.1:-47741454 | None:intergenic |
| GCATCACGTGATGGGATTGG+CGG | 0.641987 | 1.1:+47741872 | MS.gene051440:CDS |
| GGTGGCAATAGCACCTATGG+CGG | 0.644263 | 1.1:-47741436 | None:intergenic |
| TTTGGAGAAGACTTTGTCGG+AGG | 0.654309 | 1.1:+47741956 | MS.gene051440:CDS |
| ATCAGTCTCGGAATCAAACG+AGG | 0.655839 | 1.1:+47741351 | MS.gene051440:CDS |
| TTCCGAGACTGATCAATGAG+CGG | 0.656023 | 1.1:-47741341 | None:intergenic |
| GACGGCGATAGCAGGAGTGG+CGG | 0.658797 | 1.1:+47741797 | MS.gene051440:CDS |
| TCACGGGAACTTCATAGCGA+CGG | 0.662847 | 1.1:+47741779 | MS.gene051440:CDS |
| GGTTGTTTCACAATCCGACG+TGG | 0.666099 | 1.1:+47741701 | MS.gene051440:CDS |
| ACTAGCGCATATACATCACA+CGG | 0.680527 | 1.1:+47741609 | MS.gene051440:CDS |
| TTAGGGGAAATTTGGCTACG+AGG | 0.686700 | 1.1:+47743788 | MS.gene051440:CDS |
| TGTTTCACAATCCGACGTGG+CGG | 0.688159 | 1.1:+47741704 | MS.gene051440:CDS |
| ATACAGAATAACCGCCACGT+CGG | 0.702977 | 1.1:-47741715 | None:intergenic |
| TGTATTCTTCAGGCACCACG+GGG | 0.712806 | 1.1:+47741733 | MS.gene051440:CDS |
| CGATGACGTATTCCTCACCA+AGG | 0.714446 | 1.1:+47741163 | MS.gene051440:CDS |
| TATGGCATGACTGAAGCATG+CGG | 0.715652 | 1.1:+47743635 | MS.gene051440:CDS |
| CCTTCCACCGAATCAATTAG+GGG | 0.722238 | 1.1:+47743772 | MS.gene051440:CDS |
| AGATAAGATGACTATGTGTG+AGG | 0.745157 | 1.1:-47744996 | None:intergenic |
| GGTGTATAATGGACTGCAGG+TGG | 0.750758 | 1.1:-47741457 | None:intergenic |
| CTAGCGCATATACATCACAC+GGG | 0.755505 | 1.1:+47741610 | MS.gene051440:CDS |
| GCTGAGGAGAGGGAACACGG+TGG | 0.809300 | 1.1:+47741911 | MS.gene051440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAACAAGAATTAAAATA+TGG | + | chr1.1:47744834-47744853 | MS.gene051440:intron | 10.0% |
| !!! | TTGTATAAAATAATTACTTT+TGG | + | chr1.1:47744581-47744600 | MS.gene051440:intron | 10.0% |
| !! | ATTTCATATCTTAATGATAT+TGG | + | chr1.1:47743540-47743559 | MS.gene051440:intron | 15.0% |
| !! | TATGATTGAATGTATTATAT+TGG | + | chr1.1:47742944-47742963 | MS.gene051440:intron | 15.0% |
| !!! | AAAAAATGTGAATTTAGTTT+TGG | + | chr1.1:47744733-47744752 | MS.gene051440:intron | 15.0% |
| !!! | ATATCATTCACTTTTTAATT+AGG | - | chr1.1:47744936-47744955 | None:intergenic | 15.0% |
| !!! | ATTTTTAAATTGTTGATTAC+TGG | + | chr1.1:47743064-47743083 | MS.gene051440:intron | 15.0% |
| !! | AAATGATAAACTAATCAAGA+TGG | + | chr1.1:47744626-47744645 | MS.gene051440:intron | 20.0% |
| !! | AATATGGAAGTAAAAGATAA+GGG | + | chr1.1:47742973-47742992 | MS.gene051440:intron | 20.0% |
| !! | AGTTGTAACAATAAAGTAAA+AGG | - | chr1.1:47744799-47744818 | None:intergenic | 20.0% |
| !! | ATCAAAAATATTCAAACACA+AGG | + | chr1.1:47742254-47742273 | MS.gene051440:intron | 20.0% |
| !! | ATCTTAGACTTTCATATAAA+TGG | - | chr1.1:47742855-47742874 | None:intergenic | 20.0% |
| !! | CTAGATAAAAATATGACTTA+CGG | - | chr1.1:47744377-47744396 | None:intergenic | 20.0% |
| !! | GTTGTAACAATAAAGTAAAA+GGG | - | chr1.1:47744798-47744817 | None:intergenic | 20.0% |
| !! | TAATATGGAAGTAAAAGATA+AGG | + | chr1.1:47742972-47742991 | MS.gene051440:intron | 20.0% |
| !! | TTTATTAAATTATCCAACCT+AGG | + | chr1.1:47742908-47742927 | MS.gene051440:intron | 20.0% |
| !!! | ATCATATCACTATTATCTTT+TGG | - | chr1.1:47743412-47743431 | None:intergenic | 20.0% |
| !!! | ATTATATTGGAAGCATAATA+TGG | + | chr1.1:47742957-47742976 | MS.gene051440:intron | 20.0% |
| !!! | CATTTTGAATATGTTCAAAA+TGG | + | chr1.1:47742610-47742629 | MS.gene051440:intron | 20.0% |
| !!! | CTTACATAACATATTTTTTC+AGG | + | chr1.1:47743976-47743995 | MS.gene051440:intron | 20.0% |
| !!! | TTATCTTTTGGAAAATTCTA+TGG | - | chr1.1:47743400-47743419 | None:intergenic | 20.0% |
| !!! | TTTTGAGATCAAAATTTTGA+TGG | - | chr1.1:47744866-47744885 | None:intergenic | 20.0% |
| ! | AAAGCTAAATTGACAAATCA+TGG | + | chr1.1:47742880-47742899 | MS.gene051440:intron | 25.0% |
| ! | AACCTAACACAAAATCATAT+AGG | - | chr1.1:47744178-47744197 | None:intergenic | 25.0% |
| ! | AATTGTTTGTGATATGGTAT+GGG | + | chr1.1:47743596-47743615 | MS.gene051440:intron | 25.0% |
| ! | ACCTAACACAAAATCATATA+GGG | - | chr1.1:47744177-47744196 | None:intergenic | 25.0% |
| ! | GCAAATTTATAACGATTCAT+CGG | + | chr1.1:47743847-47743866 | MS.gene051440:intron | 25.0% |
| ! | GTAATGAATTGTTTGTGATA+TGG | + | chr1.1:47743590-47743609 | MS.gene051440:intron | 25.0% |
| ! | TAAGTTTCATGCAAACTAAT+AGG | - | chr1.1:47743936-47743955 | None:intergenic | 25.0% |
| ! | TGAATATGTTCAAAATGGAT+TGG | + | chr1.1:47742615-47742634 | MS.gene051440:intron | 25.0% |
| !! | AAACAAAGAGTCATATTTTG+TGG | + | chr1.1:47744231-47744250 | MS.gene051440:intron | 25.0% |
| !! | ACCTGAATGATTTCAATTTT+GGG | - | chr1.1:47742149-47742168 | None:intergenic | 25.0% |
| !! | CTCAAACTTTTCTTTTTGAA+GGG | + | chr1.1:47744966-47744985 | MS.gene051440:intron | 25.0% |
| !! | TACAAGTACTATTTTATCGT+TGG | + | chr1.1:47743136-47743155 | MS.gene051440:intron | 25.0% |
| !! | TACCTGAATGATTTCAATTT+TGG | - | chr1.1:47742150-47742169 | None:intergenic | 25.0% |
| !! | TGGTCTAAAAAATGTTTTCA+AGG | + | chr1.1:47744646-47744665 | MS.gene051440:intron | 25.0% |
| !!! | ACTATTTTATTTACCATCTC+AGG | + | chr1.1:47744433-47744452 | MS.gene051440:intron | 25.0% |
| !!! | AGTCATAAGAATGACTTTTT+TGG | - | chr1.1:47743374-47743393 | None:intergenic | 25.0% |
| !!! | TACTTTTGGAATGTTTGTTA+CGG | + | chr1.1:47744595-47744614 | MS.gene051440:intron | 25.0% |
| !!! | TGTTTCTTTTGAAAATCCAA+AGG | + | chr1.1:47743661-47743680 | MS.gene051440:CDS | 25.0% |
| AAAACAGACCATTAATGATC+AGG | + | chr1.1:47744023-47744042 | MS.gene051440:CDS | 30.0% | |
| AAACAGACCATTAATGATCA+GGG | + | chr1.1:47744024-47744043 | MS.gene051440:CDS | 30.0% | |
| AAGAGAGAAGTTATATCCAA+AGG | - | chr1.1:47744680-47744699 | None:intergenic | 30.0% | |
| AATCTTACCTTGCATCATAA+CGG | - | chr1.1:47743816-47743835 | None:intergenic | 30.0% | |
| AGAAAAAATCTGGTTGAAAG+AGG | + | chr1.1:47742709-47742728 | MS.gene051440:intron | 30.0% | |
| ATAGTGTAAACATGCATAAG+AGG | - | chr1.1:47744418-47744437 | None:intergenic | 30.0% | |
| ATGTTTGCAAACTAACAATC+TGG | - | chr1.1:47743745-47743764 | None:intergenic | 30.0% | |
| ATTGTTTGTGATATGGTATG+GGG | + | chr1.1:47743597-47743616 | MS.gene051440:intron | 30.0% | |
| CAAATTTCCCCTAATTGATT+CGG | - | chr1.1:47743782-47743801 | None:intergenic | 30.0% | |
| CAAGAAATTTGTAGCAAAAG+AGG | + | chr1.1:47744536-47744555 | MS.gene051440:CDS | 30.0% | |
| CCTAATAACGAAAATGTGTA+TGG | - | chr1.1:47744289-47744308 | None:intergenic | 30.0% | |
| CCTTCAAAAAGAAAAGTTTG+AGG | - | chr1.1:47744968-47744987 | None:intergenic | 30.0% | |
| CTAAATTGACAAATCATGGA+GGG | + | chr1.1:47742884-47742903 | MS.gene051440:intron | 30.0% | |
| CTCTTGCATAAGAAAAAATC+TGG | + | chr1.1:47742699-47742718 | MS.gene051440:intron | 30.0% | |
| GAAATCATTCAGGTAAAGAA+AGG | + | chr1.1:47742155-47742174 | MS.gene051440:intron | 30.0% | |
| GAATTGTTTGTGATATGGTA+TGG | + | chr1.1:47743595-47743614 | MS.gene051440:intron | 30.0% | |
| TCTTAAGTGTTACACTTTGT+GGG | + | chr1.1:47743193-47743212 | MS.gene051440:intron | 30.0% | |
| TGTTTGCAAACTAACAATCT+GGG | - | chr1.1:47743744-47743763 | None:intergenic | 30.0% | |
| TTAGGTTCAAATACTTTCTC+TGG | + | chr1.1:47744191-47744210 | MS.gene051440:intron | 30.0% | |
| TTCAAAAACATCGAAGGATT+TGG | + | chr1.1:47741546-47741565 | MS.gene051440:CDS | 30.0% | |
| TTTCAACTTGAGACTTCAAT+TGG | + | chr1.1:47742522-47742541 | MS.gene051440:intron | 30.0% | |
| ! | ATTGACTCATTGCTATACAA+CGG | + | chr1.1:47742782-47742801 | MS.gene051440:intron | 30.0% |
| ! | CATATCACTATTTTCATCCT+AGG | - | chr1.1:47742928-47742947 | None:intergenic | 30.0% |
| ! | CCATACACATTTTCGTTATT+AGG | + | chr1.1:47744286-47744305 | MS.gene051440:intron | 30.0% |
| ! | CCTCAAACTTTTCTTTTTGA+AGG | + | chr1.1:47744965-47744984 | MS.gene051440:intron | 30.0% |
| ! | GATGAATTGATGATACTATG+AGG | + | chr1.1:47743273-47743292 | MS.gene051440:intron | 30.0% |
| ! | GGGAAACAGTTTTCTTATAA+AGG | - | chr1.1:47744157-47744176 | None:intergenic | 30.0% |
| ! | TACACATTTTCGTTATTAGG+TGG | + | chr1.1:47744289-47744308 | MS.gene051440:intron | 30.0% |
| ! | TCCCTATATGATTTTGTGTT+AGG | + | chr1.1:47744173-47744192 | MS.gene051440:intron | 30.0% |
| !! | TCTTTTGAAAATCCAAAGGA+AGG | + | chr1.1:47743665-47743684 | MS.gene051440:CDS | 30.0% |
| !!! | CTTGGATATTTTGACGAAAA+AGG | + | chr1.1:47744066-47744085 | MS.gene051440:CDS | 30.0% |
| AAAAGATAAGGGAGCTTCTA+CGG | + | chr1.1:47742984-47743003 | MS.gene051440:intron | 35.0% | |
| AAAAGGACAACTATTTGTCG+TGG | + | chr1.1:47744083-47744102 | MS.gene051440:CDS | 35.0% | |
| AAATACTTTCTCTGGTCTCT+CGG | + | chr1.1:47744199-47744218 | MS.gene051440:intron | 35.0% | |
| ACGGGTATGTTTCAAATGTT+TGG | + | chr1.1:47741628-47741647 | MS.gene051440:CDS | 35.0% | |
| ATCCTGAAATTTCTGATGCT+GGG | + | chr1.1:47744345-47744364 | MS.gene051440:CDS | 35.0% | |
| ATCTTACCTTGCATCATAAC+GGG | - | chr1.1:47743815-47743834 | None:intergenic | 35.0% | |
| ATGTCATTGTACAAACAGTG+GGG | + | chr1.1:47743308-47743327 | MS.gene051440:intron | 35.0% | |
| CGAATCAATTAGGGGAAATT+TGG | + | chr1.1:47743780-47743799 | MS.gene051440:CDS | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | + | chr1.1:47743194-47743213 | MS.gene051440:intron | 35.0% | |
| GAACTCTTCAAAAACATCGA+AGG | + | chr1.1:47741540-47741559 | MS.gene051440:CDS | 35.0% | |
| GAAGAATGTGTTCCTTTGTT+TGG | + | chr1.1:47741842-47741861 | MS.gene051440:CDS | 35.0% | |
| GATGTCATTGTACAAACAGT+GGG | + | chr1.1:47743307-47743326 | MS.gene051440:intron | 35.0% | |
| GCCCAAAATTGAAATCATTC+AGG | + | chr1.1:47742145-47742164 | MS.gene051440:CDS | 35.0% | |
| GCTAAATTGACAAATCATGG+AGG | + | chr1.1:47742883-47742902 | MS.gene051440:intron | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | + | chr1.1:47743192-47743211 | MS.gene051440:intron | 35.0% | |
| TAGTAATGCTTGCAACATCT+TGG | + | chr1.1:47743110-47743129 | MS.gene051440:intron | 35.0% | |
| TGATGTCATTGTACAAACAG+TGG | + | chr1.1:47743306-47743325 | MS.gene051440:intron | 35.0% | |
| TGCTACGCTTATAAAAAGGT+AGG | + | chr1.1:47743217-47743236 | MS.gene051440:intron | 35.0% | |
| ! | AAAGAGTTGATCAAGTGCAA+CGG | + | chr1.1:47744114-47744133 | MS.gene051440:CDS | 35.0% |
| ! | AACCATTGACTACATGCTTA+AGG | - | chr1.1:47742669-47742688 | None:intergenic | 35.0% |
| ! | TCACTATTTTCATCCTAGGT+TGG | - | chr1.1:47742924-47742943 | None:intergenic | 35.0% |
| ! | TGATTTGGAGAAGACTTTGT+CGG | + | chr1.1:47741953-47741972 | MS.gene051440:CDS | 35.0% |
| ! | TTGGATTTGCTTAGTGAGTT+CGG | - | chr1.1:47741487-47741506 | None:intergenic | 35.0% |
| !! | GTTTTTGAAGAGTTCCGATA+CGG | - | chr1.1:47741535-47741554 | None:intergenic | 35.0% |
| !! | TAAGCTTGTTGTAACCGTAT+CGG | + | chr1.1:47741518-47741537 | MS.gene051440:CDS | 35.0% |
| !! | TCAAAATGGATTGGTCCAAA+TGG | + | chr1.1:47742624-47742643 | MS.gene051440:intron | 35.0% |
| ACTAGCGCATATACATCACA+CGG | + | chr1.1:47741609-47741628 | MS.gene051440:CDS | 40.0% | |
| AGACCATTAATGATCAGGGT+TGG | + | chr1.1:47744028-47744047 | MS.gene051440:CDS | 40.0% | |
| AGACTTCAATTGGACGATCA+CGG | + | chr1.1:47742532-47742551 | MS.gene051440:intron | 40.0% | |
| AGGATGTTGTGGGATACTTA+AGG | - | chr1.1:47742743-47742762 | None:intergenic | 40.0% | |
| ATTCAAACAGGAAGGAGGTT+AGG | - | chr1.1:47741224-47741243 | None:intergenic | 40.0% | |
| ATTGACTACATGCTTAAGGC+CGG | - | chr1.1:47742665-47742684 | None:intergenic | 40.0% | |
| CAAATCAAATCTACCAGCCA+TGG | - | chr1.1:47741940-47741959 | None:intergenic | 40.0% | |
| CAGTTGAACCTGAATTCGAA+AGG | - | chr1.1:47743697-47743716 | None:intergenic | 40.0% | |
| CATCCTGAAATTTCTGATGC+TGG | + | chr1.1:47744344-47744363 | MS.gene051440:CDS | 40.0% | |
| CATGGCTGGTAGATTTGATT+TGG | + | chr1.1:47741938-47741957 | MS.gene051440:CDS | 40.0% | |
| GATACGGTTACAACAAGCTT+AGG | - | chr1.1:47741519-47741538 | None:intergenic | 40.0% | |
| GATATGGTATGGGGTAATTG+TGG | + | chr1.1:47743606-47743625 | MS.gene051440:intron | 40.0% | |
| GCGGTTATTCTGTATTCTTC+AGG | + | chr1.1:47741723-47741742 | MS.gene051440:CDS | 40.0% | |
| TATTGCTTGACGATGAACCT+TGG | + | chr1.1:47741586-47741605 | MS.gene051440:CDS | 40.0% | |
| TCCTGAAATTTCTGATGCTG+GGG | + | chr1.1:47744346-47744365 | MS.gene051440:CDS | 40.0% | |
| TGAACCTGAATTCGAAAGGA+AGG | - | chr1.1:47743693-47743712 | None:intergenic | 40.0% | |
| TGATATTATACACGCAGCTG+AGG | + | chr1.1:47741895-47741914 | MS.gene051440:CDS | 40.0% | |
| TGCATCAAATCTTTCCCAAG+AGG | - | chr1.1:47742107-47742126 | None:intergenic | 40.0% | |
| TTCAAACAGGAAGGAGGTTA+GGG | - | chr1.1:47741223-47741242 | None:intergenic | 40.0% | |
| TTTCAAGGAGAAGCTACCTT+TGG | + | chr1.1:47744661-47744680 | MS.gene051440:intron | 40.0% | |
| ! | AACATCGAAGGATTTGGCTT+AGG | + | chr1.1:47741552-47741571 | MS.gene051440:CDS | 40.0% |
| ! | AAGAGTTGATCAAGTGCAAC+GGG | + | chr1.1:47744115-47744134 | MS.gene051440:CDS | 40.0% |
| ! | ACAATCTGGGATTCTACACT+TGG | - | chr1.1:47743731-47743750 | None:intergenic | 40.0% |
| ! | AGGAATACGTCATCGTTTTG+AGG | - | chr1.1:47741158-47741177 | None:intergenic | 40.0% |
| ! | AGTTGATTCAAACAGGAAGG+AGG | - | chr1.1:47741229-47741248 | None:intergenic | 40.0% |
| ! | CTTTCGAATTCAGGTTCAAC+TGG | + | chr1.1:47743695-47743714 | MS.gene051440:CDS | 40.0% |
| ! | GGAAGTTGATTCAAACAGGA+AGG | - | chr1.1:47741232-47741251 | None:intergenic | 40.0% |
| !! | AGACTTGGATATTGAGTTGG+CGG | - | chr1.1:47741311-47741330 | None:intergenic | 40.0% |
| !! | ATGGATTGGTCCAAATGGTA+AGG | + | chr1.1:47742629-47742648 | MS.gene051440:intron | 40.0% |
| !! | ATGGTCTGTTTTGTTGCTTC+TGG | - | chr1.1:47744015-47744034 | None:intergenic | 40.0% |
| !! | ATTTCCCCTAATTGATTCGG+TGG | - | chr1.1:47743779-47743798 | None:intergenic | 40.0% |
| !! | TGGATTGGTCCAAATGGTAA+GGG | + | chr1.1:47742630-47742649 | MS.gene051440:intron | 40.0% |
| !!! | TGGTGCTACGAAGATCTTTT+CGG | + | chr1.1:47741648-47741667 | MS.gene051440:CDS | 40.0% |
| AATCCCATCACGTGATGCAT+CGG | - | chr1.1:47741870-47741889 | None:intergenic | 45.0% | |
| ACCCCAGCATCAGAAATTTC+AGG | - | chr1.1:47744350-47744369 | None:intergenic | 45.0% | |
| ACGTCGGATTGTGAAACAAC+CGG | - | chr1.1:47741702-47741721 | None:intergenic | 45.0% | |
| AGTTCGGAGACGGTGTATAA+TGG | - | chr1.1:47741471-47741490 | None:intergenic | 45.0% | |
| ATACAGAATAACCGCCACGT+CGG | - | chr1.1:47741718-47741737 | None:intergenic | 45.0% | |
| ATCAGTCTCGGAATCAAACG+AGG | + | chr1.1:47741351-47741370 | MS.gene051440:CDS | 45.0% | |
| CACGGATTCTTGACTTTGTG+CGG | + | chr1.1:47742550-47742569 | MS.gene051440:intron | 45.0% | |
| CCCTTCCACCGAATCAATTA+GGG | + | chr1.1:47743771-47743790 | MS.gene051440:CDS | 45.0% | |
| CCTTCCACCGAATCAATTAG+GGG | + | chr1.1:47743772-47743791 | MS.gene051440:CDS | 45.0% | |
| CGGAGACTTGGATATTGAGT+TGG | - | chr1.1:47741314-47741333 | None:intergenic | 45.0% | |
| CGTCCAACCCTGATCATTAA+TGG | - | chr1.1:47744034-47744053 | None:intergenic | 45.0% | |
| CTAGCGCATATACATCACAC+GGG | + | chr1.1:47741610-47741629 | MS.gene051440:CDS | 45.0% | |
| CTTGTGACGGTAGAGAATTC+GGG | - | chr1.1:47742423-47742442 | None:intergenic | 45.0% | |
| GACTCATTGCTATACAACGG+TGG | + | chr1.1:47742785-47742804 | MS.gene051440:intron | 45.0% | |
| GAGCGAACAACAAAAGCAAC+TGG | - | chr1.1:47744486-47744505 | None:intergenic | 45.0% | |
| GATGTATATGCGCTAGTCCA+AGG | - | chr1.1:47741606-47741625 | None:intergenic | 45.0% | |
| GCTTGTGACGGTAGAGAATT+CGG | - | chr1.1:47742424-47742443 | None:intergenic | 45.0% | |
| GGCCTTAAGCATGTAGTCAA+TGG | + | chr1.1:47742664-47742683 | MS.gene051440:intron | 45.0% | |
| GGTTACAACAAGCTTAGGCT+TGG | - | chr1.1:47741514-47741533 | None:intergenic | 45.0% | |
| GTCCAAATGGTAAGGGGTTT+GGG | + | chr1.1:47742637-47742656 | MS.gene051440:intron | 45.0% | |
| TATGGCATGACTGAAGCATG+CGG | + | chr1.1:47743635-47743654 | MS.gene051440:CDS | 45.0% | |
| TCTGTATTCTTCAGGCACCA+CGG | + | chr1.1:47741731-47741750 | MS.gene051440:CDS | 45.0% | |
| TGACTAATCTCCATCGAGTG+AGG | - | chr1.1:47742763-47742782 | None:intergenic | 45.0% | |
| TTAGGGGAAATTTGGCTACG+AGG | + | chr1.1:47743788-47743807 | MS.gene051440:CDS | 45.0% | |
| TTCCGAGACTGATCAATGAG+CGG | - | chr1.1:47741344-47741363 | None:intergenic | 45.0% | |
| TTGCTTAGTGAGTTCGGAGA+CGG | - | chr1.1:47741481-47741500 | None:intergenic | 45.0% | |
| TTTGGAGAAGACTTTGTCGG+AGG | + | chr1.1:47741956-47741975 | MS.gene051440:CDS | 45.0% | |
| ! | AGTAAGTCTTCGAGTTCAGC+AGG | - | chr1.1:47744317-47744336 | None:intergenic | 45.0% |
| ! | CGGAGGAAGTTGATTCAAAC+AGG | - | chr1.1:47741236-47741255 | None:intergenic | 45.0% |
| ! | GGGGTGCTACGCTTATAAAA+AGG | + | chr1.1:47743213-47743232 | MS.gene051440:intron | 45.0% |
| !! | AAGGGAGTGATGTTGACTCA+CGG | + | chr1.1:47741762-47741781 | MS.gene051440:CDS | 45.0% |
| !! | CCCTAATTGATTCGGTGGAA+GGG | - | chr1.1:47743774-47743793 | None:intergenic | 45.0% |
| !! | CCTAATTGATTCGGTGGAAG+GGG | - | chr1.1:47743773-47743792 | None:intergenic | 45.0% |
| !! | GGATTGGTCCAAATGGTAAG+GGG | + | chr1.1:47742631-47742650 | MS.gene051440:intron | 45.0% |
| !! | TTGGATATTGAGTTGGCGGA+AGG | - | chr1.1:47741307-47741326 | None:intergenic | 45.0% |
| AAGGAGGTTAGGGAGAGGTT+GGG | - | chr1.1:47741213-47741232 | None:intergenic | 50.0% | |
| ACGGGGAAACGTATGGAGTT+AGG | - | chr1.1:47741399-47741418 | None:intergenic | 50.0% | |
| AGCCCAAACCCCTTACCATT+TGG | - | chr1.1:47742642-47742661 | None:intergenic | 50.0% | |
| CAAGCTTAGGCTTGGAGTCT+TGG | - | chr1.1:47741506-47741525 | None:intergenic | 50.0% | |
| CCATCGAGTGAGGATGTTGT+GGG | - | chr1.1:47742753-47742772 | None:intergenic | 50.0% | |
| CCCCTTCCACCGAATCAATT+AGG | + | chr1.1:47743770-47743789 | MS.gene051440:CDS | 50.0% | |
| CGATGACGTATTCCTCACCA+AGG | + | chr1.1:47741163-47741182 | MS.gene051440:CDS | 50.0% | |
| CGGGTTCCAAATTATCCCGT+GGG | - | chr1.1:47742404-47742423 | None:intergenic | 50.0% | |
| CTCTACCGTCACAAGCACAT+GGG | + | chr1.1:47742428-47742447 | MS.gene051440:intron | 50.0% | |
| CTGTATTCTTCAGGCACCAC+GGG | + | chr1.1:47741732-47741751 | MS.gene051440:CDS | 50.0% | |
| GAAAGGAAGGCTCCTTCCTT+TGG | - | chr1.1:47743680-47743699 | None:intergenic | 50.0% | |
| GATCAATGAGCGGGAGAATG+CGG | - | chr1.1:47741334-47741353 | None:intergenic | 50.0% | |
| GCGAATAAGACCCGACACAA+AGG | + | chr1.1:47742372-47742391 | MS.gene051440:intron | 50.0% | |
| GGAGCCTTCCTTTCGAATTC+AGG | + | chr1.1:47743686-47743705 | MS.gene051440:CDS | 50.0% | |
| GGTATGGGGTAATTGTGGCA+GGG | + | chr1.1:47743611-47743630 | MS.gene051440:intron | 50.0% | |
| GGTCCAAATGGTAAGGGGTT+TGG | + | chr1.1:47742636-47742655 | MS.gene051440:intron | 50.0% | |
| GTATGGGGTAATTGTGGCAG+GGG | + | chr1.1:47743612-47743631 | MS.gene051440:intron | 50.0% | |
| GTCGGAGGTGGAGAAGTTTA+GGG | + | chr1.1:47741971-47741990 | MS.gene051440:CDS | 50.0% | |
| TATACACGCAGCTGAGGAGA+GGG | + | chr1.1:47741901-47741920 | MS.gene051440:CDS | 50.0% | |
| TCACGGGAACTTCATAGCGA+CGG | + | chr1.1:47741779-47741798 | MS.gene051440:CDS | 50.0% | |
| TCCAAATTATCCCGTGGGCA+GGG | - | chr1.1:47742399-47742418 | None:intergenic | 50.0% | |
| TCCATCGAGTGAGGATGTTG+TGG | - | chr1.1:47742754-47742773 | None:intergenic | 50.0% | |
| TCCCGCTCATTGATCAGTCT+CGG | + | chr1.1:47741339-47741358 | MS.gene051440:CDS | 50.0% | |
| TCCGAGACTGATCAATGAGC+GGG | - | chr1.1:47741343-47741362 | None:intergenic | 50.0% | |
| TCGGGTTCCAAATTATCCCG+TGG | - | chr1.1:47742405-47742424 | None:intergenic | 50.0% | |
| TCTCTACCGTCACAAGCACA+TGG | + | chr1.1:47742427-47742446 | MS.gene051440:intron | 50.0% | |
| TCTTGCCCATGTGCTTGTGA+CGG | - | chr1.1:47742436-47742455 | None:intergenic | 50.0% | |
| TGAAACAACCGGAAACTCGC+CGG | - | chr1.1:47741691-47741710 | None:intergenic | 50.0% | |
| TGACTTTGTGCGGCAAGTGA+CGG | + | chr1.1:47742560-47742579 | MS.gene051440:intron | 50.0% | |
| TGGTATGGGGTAATTGTGGC+AGG | + | chr1.1:47743610-47743629 | MS.gene051440:intron | 50.0% | |
| TGTATTCTTCAGGCACCACG+GGG | + | chr1.1:47741733-47741752 | MS.gene051440:CDS | 50.0% | |
| TGTCGGAGGTGGAGAAGTTT+AGG | + | chr1.1:47741970-47741989 | MS.gene051440:CDS | 50.0% | |
| TGTTTCACAATCCGACGTGG+CGG | + | chr1.1:47741704-47741723 | MS.gene051440:CDS | 50.0% | |
| TTATACACGCAGCTGAGGAG+AGG | + | chr1.1:47741900-47741919 | MS.gene051440:CDS | 50.0% | |
| TTCCAAATTATCCCGTGGGC+AGG | - | chr1.1:47742400-47742419 | None:intergenic | 50.0% | |
| ! | ATCAGGACTTTTACGGCGAG+GGG | + | chr1.1:47741820-47741839 | MS.gene051440:CDS | 50.0% |
| ! | GATCAGGACTTTTACGGCGA+GGG | + | chr1.1:47741819-47741838 | MS.gene051440:CDS | 50.0% |
| ! | GATGCATCACGTGATGGGAT+TGG | + | chr1.1:47741869-47741888 | MS.gene051440:CDS | 50.0% |
| ! | GATGCATCGGCACCAAACAA+AGG | - | chr1.1:47741857-47741876 | None:intergenic | 50.0% |
| ! | GCATTTGTTTGTTGCTCCGC+CGG | + | chr1.1:47741998-47742017 | MS.gene051440:CDS | 50.0% |
| ! | GGATCAGTGGGAAGGTTGAT+GGG | - | chr1.1:47741192-47741211 | None:intergenic | 50.0% |
| ! | GGTTGTTTCACAATCCGACG+TGG | + | chr1.1:47741701-47741720 | MS.gene051440:CDS | 50.0% |
| !! | AGGGAGTGATGTTGACTCAC+GGG | + | chr1.1:47741763-47741782 | MS.gene051440:CDS | 50.0% |
| !! | CCCCTAATTGATTCGGTGGA+AGG | - | chr1.1:47743775-47743794 | None:intergenic | 50.0% |
| !! | GACGGTGTATAATGGACTGC+AGG | - | chr1.1:47741463-47741482 | None:intergenic | 50.0% |
| !! | GGTGTATAATGGACTGCAGG+TGG | - | chr1.1:47741460-47741479 | None:intergenic | 50.0% |
| !! | GTATAATGGACTGCAGGTGG+TGG | - | chr1.1:47741457-47741476 | None:intergenic | 50.0% |
| !!! | GTGGCGGATCAGGACTTTTA+CGG | + | chr1.1:47741813-47741832 | MS.gene051440:CDS | 50.0% |
| AACTGGAACCTCGCCAGCTT+TGG | - | chr1.1:47744469-47744488 | None:intergenic | 55.0% | |
| AATAGCACCTATGGCGGCGA+CGG | - | chr1.1:47741433-47741452 | None:intergenic | 55.0% | |
| ACAGGAAGGAGGTTAGGGAG+AGG | - | chr1.1:47741218-47741237 | None:intergenic | 55.0% | |
| ACCCTGCCCACGGGATAATT+TGG | + | chr1.1:47742395-47742414 | MS.gene051440:intron | 55.0% | |
| AGAGGTTGGGATCAGTGGGA+AGG | - | chr1.1:47741200-47741219 | None:intergenic | 55.0% | |
| AGGCACCACGGGGAAAAGTA+AGG | + | chr1.1:47741743-47741762 | MS.gene051440:CDS | 55.0% | |
| AGGGAGAGGTTGGGATCAGT+GGG | - | chr1.1:47741204-47741223 | None:intergenic | 55.0% | |
| AGGTCTCCTGATGCCAAAGC+TGG | + | chr1.1:47744453-47744472 | MS.gene051440:intron | 55.0% | |
| ATCAGCGAGCGCAATGGTGT+CGG | - | chr1.1:47741262-47741281 | None:intergenic | 55.0% | |
| ATGGTAAGGGGTTTGGGCTC+CGG | + | chr1.1:47742643-47742662 | MS.gene051440:intron | 55.0% | |
| CCCACAACATCCTCACTCGA+TGG | + | chr1.1:47742750-47742769 | MS.gene051440:intron | 55.0% | |
| CGAGGACCCGTTATGATGCA+AGG | + | chr1.1:47743806-47743825 | MS.gene051440:CDS | 55.0% | |
| GAAGCAGACGGGGAAACGTA+TGG | - | chr1.1:47741406-47741425 | None:intergenic | 55.0% | |
| GAAGGAGGTTAGGGAGAGGT+TGG | - | chr1.1:47741214-47741233 | None:intergenic | 55.0% | |
| GACTTTGTGCGGCAAGTGAC+GGG | + | chr1.1:47742561-47742580 | MS.gene051440:intron | 55.0% | |
| GATCAGGGTTGGACGCTTAC+TGG | + | chr1.1:47744039-47744058 | MS.gene051440:CDS | 55.0% | |
| GGAGAAGACTTTGTCGGAGG+TGG | + | chr1.1:47741959-47741978 | MS.gene051440:CDS | 55.0% | |
| GGAGAGTTGTGTGAGAGCTC+CGG | + | chr1.1:47741669-47741688 | MS.gene051440:CDS | 55.0% | |
| GGCACCACGGGGAAAAGTAA+GGG | + | chr1.1:47741744-47741763 | MS.gene051440:CDS | 55.0% | |
| GGGATCAGTGGGAAGGTTGA+TGG | - | chr1.1:47741193-47741212 | None:intergenic | 55.0% | |
| GGGTAATTGTGGCAGGGGTA+TGG | + | chr1.1:47743617-47743636 | MS.gene051440:intron | 55.0% | |
| GGTGGCAATAGCACCTATGG+CGG | - | chr1.1:47741439-47741458 | None:intergenic | 55.0% | |
| TAGGGAGAGGTTGGGATCAG+TGG | - | chr1.1:47741205-47741224 | None:intergenic | 55.0% | |
| TGGACGCTTACTGGCGATCT+TGG | + | chr1.1:47744048-47744067 | MS.gene051440:CDS | 55.0% | |
| TGGCATCAGGAGACCTGAGA+TGG | - | chr1.1:47744449-47744468 | None:intergenic | 55.0% | |
| TTCATAGCGACGGCGATAGC+AGG | + | chr1.1:47741789-47741808 | MS.gene051440:CDS | 55.0% | |
| TTGACCAGCTCCACCATCAC+CGG | - | chr1.1:47742020-47742039 | None:intergenic | 55.0% | |
| ! | GCATCACGTGATGGGATTGG+CGG | + | chr1.1:47741872-47741891 | MS.gene051440:CDS | 55.0% |
| ! | GGATCAGGACTTTTACGGCG+AGG | + | chr1.1:47741818-47741837 | MS.gene051440:CDS | 55.0% |
| ! | GGTGGTGGCAATAGCACCTA+TGG | - | chr1.1:47741442-47741461 | None:intergenic | 55.0% |
| ! | GTGCCGATGCATCACGTGAT+GGG | + | chr1.1:47741864-47741883 | MS.gene051440:CDS | 55.0% |
| !! | CAAGTGACGGGAGGGTATTC+AGG | + | chr1.1:47742573-47742592 | MS.gene051440:intron | 55.0% |
| !! | CACTCCCTTACTTTTCCCCG+TGG | - | chr1.1:47741751-47741770 | None:intergenic | 55.0% |
| !! | GGAAGGTTGATGGGTTGCCT+TGG | - | chr1.1:47741183-47741202 | None:intergenic | 55.0% |
| !! | GTTGATGGGTTGCCTTGGTG+AGG | - | chr1.1:47741178-47741197 | None:intergenic | 55.0% |
| !! | TGATGGTGGAGCTGGTCAAG+CGG | + | chr1.1:47742021-47742040 | MS.gene051440:CDS | 55.0% |
| AACACGGTGGTGTCCATGGC+TGG | + | chr1.1:47741924-47741943 | MS.gene051440:CDS | 60.0% | |
| ACACAAAGGACCCTGCCCAC+GGG | + | chr1.1:47742386-47742405 | MS.gene051440:intron | 60.0% | |
| AGCGGGAGAATGCGGAGACT+TGG | - | chr1.1:47741326-47741345 | None:intergenic | 60.0% | |
| AGGGAACACGGTGGTGTCCA+TGG | + | chr1.1:47741920-47741939 | MS.gene051440:CDS | 60.0% | |
| GACACAAAGGACCCTGCCCA+CGG | + | chr1.1:47742385-47742404 | MS.gene051440:intron | 60.0% | |
| GCAGCTGAGGAGAGGGAACA+CGG | + | chr1.1:47741908-47741927 | MS.gene051440:CDS | 60.0% | |
| GTGGGCAGGGTCCTTTGTGT+CGG | - | chr1.1:47742386-47742405 | None:intergenic | 60.0% | |
| TCCTGATGCCAAAGCTGGCG+AGG | + | chr1.1:47744458-47744477 | MS.gene051440:CDS | 60.0% | |
| TGAGAGCTCCGGCGAGTTTC+CGG | + | chr1.1:47741680-47741699 | MS.gene051440:CDS | 60.0% | |
| TGCGCTCGCTGATGCGCAAA+CGG | + | chr1.1:47741269-47741288 | MS.gene051440:CDS | 60.0% | |
| TGGGCAGGGTCCTTTGTGTC+GGG | - | chr1.1:47742385-47742404 | None:intergenic | 60.0% | |
| TTGCGCATCAGCGAGCGCAA+TGG | - | chr1.1:47741268-47741287 | None:intergenic | 60.0% | |
| ! | ACCTCGCCAGCTTTGGCATC+AGG | - | chr1.1:47744462-47744481 | None:intergenic | 60.0% |
| ! | GTTTGTTGCTCCGCCGGTGA+TGG | + | chr1.1:47742004-47742023 | MS.gene051440:CDS | 60.0% |
| ! | TTGTGCGGCAAGTGACGGGA+GGG | + | chr1.1:47742565-47742584 | MS.gene051440:intron | 60.0% |
| ! | TTTGTGCGGCAAGTGACGGG+AGG | + | chr1.1:47742564-47742583 | MS.gene051440:intron | 60.0% |
| !! | CTGGTGGTGCTGCTCCTCTT+GGG | + | chr1.1:47742090-47742109 | MS.gene051440:CDS | 60.0% |
| !! | GATAGCAGGAGTGGCGGATC+AGG | + | chr1.1:47741803-47741822 | MS.gene051440:CDS | 60.0% |
| !! | GGTGCCGATGCATCACGTGA+TGG | + | chr1.1:47741863-47741882 | MS.gene051440:CDS | 60.0% |
| AAGCGGCGTGAGGTGGTGAG+CGG | + | chr1.1:47742038-47742057 | MS.gene051440:CDS | 65.0% | |
| ACCAGCTCCACCATCACCGG+CGG | - | chr1.1:47742017-47742036 | None:intergenic | 65.0% | |
| AGCGACGGCGATAGCAGGAG+TGG | + | chr1.1:47741794-47741813 | MS.gene051440:CDS | 65.0% | |
| GACGGCGATAGCAGGAGTGG+CGG | + | chr1.1:47741797-47741816 | MS.gene051440:CDS | 65.0% | |
| GCGCTCGCTGATGCGCAAAC+GGG | + | chr1.1:47741270-47741289 | MS.gene051440:CDS | 65.0% | |
| GCTGAGGAGAGGGAACACGG+TGG | + | chr1.1:47741911-47741930 | MS.gene051440:CDS | 65.0% | |
| TCGCTGAAGCAGCTCGCTGG+TGG | + | chr1.1:47742074-47742093 | MS.gene051440:CDS | 65.0% | |
| TCGTCGCTGAAGCAGCTCGC+TGG | + | chr1.1:47742071-47742090 | MS.gene051440:CDS | 65.0% | |
| ! | AGCGAGCGCAATGGTGTCGG+CGG | - | chr1.1:47741259-47741278 | None:intergenic | 65.0% |
| ! | TGTTGCTCCGCCGGTGATGG+TGG | + | chr1.1:47742007-47742026 | MS.gene051440:CDS | 65.0% |
| !! | GCTGGTGGTGCTGCTCCTCT+TGG | + | chr1.1:47742089-47742108 | MS.gene051440:CDS | 65.0% |
| CGACGGCGAGGAAGCAGACG+GGG | - | chr1.1:47741416-47741435 | None:intergenic | 70.0% | |
| GCGACGGCGAGGAAGCAGAC+GGG | - | chr1.1:47741417-47741436 | None:intergenic | 70.0% | |
| GCTGGTCAAGCGGCGTGAGG+TGG | + | chr1.1:47742031-47742050 | MS.gene051440:CDS | 70.0% | |
| GGAGCTGGTCAAGCGGCGTG+AGG | + | chr1.1:47742028-47742047 | MS.gene051440:CDS | 70.0% | |
| GGCGACGGCGAGGAAGCAGA+CGG | - | chr1.1:47741418-47741437 | None:intergenic | 70.0% | |
| TTCCTCGCCGTCGCCGCCAT+AGG | + | chr1.1:47741423-47741442 | MS.gene051440:CDS | 70.0% | |
| !! | GAGCGCAATGGTGTCGGCGG+CGG | - | chr1.1:47741256-47741275 | None:intergenic | 70.0% |
| !! | TCCGCCGGTGATGGTGGAGC+TGG | + | chr1.1:47742013-47742032 | MS.gene051440:CDS | 70.0% |
| CACCTATGGCGGCGACGGCG+AGG | - | chr1.1:47741428-47741447 | None:intergenic | 75.0% | |
| !! | CGCAATGGTGTCGGCGGCGG+AGG | - | chr1.1:47741253-47741272 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 47741135 | 47745007 | 47741135 | ID=MS.gene051440 |
| chr1.1 | mRNA | 47741135 | 47745007 | 47741135 | ID=MS.gene051440.t1;Parent=MS.gene051440 |
| chr1.1 | exon | 47741135 | 47742166 | 47741135 | ID=MS.gene051440.t1.exon1;Parent=MS.gene051440.t1 |
| chr1.1 | CDS | 47741135 | 47742166 | 47741135 | ID=cds.MS.gene051440.t1;Parent=MS.gene051440.t1 |
| chr1.1 | exon | 47743632 | 47743827 | 47743632 | ID=MS.gene051440.t1.exon2;Parent=MS.gene051440.t1 |
| chr1.1 | CDS | 47743632 | 47743827 | 47743632 | ID=cds.MS.gene051440.t1;Parent=MS.gene051440.t1 |
| chr1.1 | exon | 47743998 | 47744143 | 47743998 | ID=MS.gene051440.t1.exon3;Parent=MS.gene051440.t1 |
| chr1.1 | CDS | 47743998 | 47744143 | 47743998 | ID=cds.MS.gene051440.t1;Parent=MS.gene051440.t1 |
| chr1.1 | exon | 47744308 | 47744375 | 47744308 | ID=MS.gene051440.t1.exon4;Parent=MS.gene051440.t1 |
| chr1.1 | CDS | 47744308 | 47744375 | 47744308 | ID=cds.MS.gene051440.t1;Parent=MS.gene051440.t1 |
| chr1.1 | exon | 47744455 | 47744557 | 47744455 | ID=MS.gene051440.t1.exon5;Parent=MS.gene051440.t1 |
| chr1.1 | CDS | 47744455 | 47744557 | 47744455 | ID=cds.MS.gene051440.t1;Parent=MS.gene051440.t1 |
| chr1.1 | exon | 47744987 | 47745007 | 47744987 | ID=MS.gene051440.t1.exon6;Parent=MS.gene051440.t1 |
| chr1.1 | CDS | 47744987 | 47745007 | 47744987 | ID=cds.MS.gene051440.t1;Parent=MS.gene051440.t1 |
| Gene Sequence |
| Protein sequence |
