Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74325.t1 | PNY02140.1 | 99.4 | 174 | 1 | 0 | 2 | 175 | 1 | 174 | 8.70E-97 | 362.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74325.t1 | P74516 | 49.7 | 147 | 66 | 3 | 2 | 148 | 11 | 149 | 7.8e-30 | 131.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74325.t1 | A0A2K3NGI4 | 99.4 | 174 | 1 | 0 | 2 | 175 | 1 | 174 | 6.3e-97 | 362.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene74325 | 0.825924 | 3.60E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene74325 | 0.826271 | 2.97E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene74325 | 0.835095 | 2.05E-56 | -1.69E-46 |
| MS.gene050397 | MS.gene74325 | 0.831373 | 1.73E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene74325 | 0.809169 | 2.16E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene74325 | 0.831482 | 1.63E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene74325 | 0.846151 | 2.60E-59 | -1.69E-46 |
| MS.gene051471 | MS.gene74325 | 0.856904 | 2.35E-62 | -1.69E-46 |
| MS.gene051662 | MS.gene74325 | 0.803476 | 3.42E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene74325 | 0.802512 | 5.42E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene74325 | 0.83967 | 1.38E-57 | -1.69E-46 |
| MS.gene052178 | MS.gene74325 | 0.819394 | 1.19E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene74325 | 0.80393 | 2.76E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene74325 | 0.808969 | 2.39E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene74325 | 0.816211 | 6.22E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene74325 | 0.847028 | 1.50E-59 | -1.69E-46 |
| MS.gene053907 | MS.gene74325 | 0.809147 | 2.18E-50 | -1.69E-46 |
| MS.gene053971 | MS.gene74325 | 0.808075 | 3.70E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene74325 | 0.851409 | 9.05E-61 | -1.69E-46 |
| MS.gene055390 | MS.gene74325 | 0.815221 | 1.03E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene74325 | 0.838528 | 2.73E-57 | -1.69E-46 |
| MS.gene055428 | MS.gene74325 | 0.855346 | 6.71E-62 | -1.69E-46 |
| MS.gene056451 | MS.gene74325 | 0.800473 | 1.42E-48 | -1.69E-46 |
| MS.gene056612 | MS.gene74325 | 0.847794 | 9.23E-60 | -1.69E-46 |
| MS.gene05702 | MS.gene74325 | 0.813539 | 2.43E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene74325 | 0.829058 | 6.36E-55 | -1.69E-46 |
| MS.gene057245 | MS.gene74325 | 0.80544 | 1.33E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene74325 | 0.801407 | 9.14E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene74325 | 0.823466 | 1.36E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene74325 | 0.831895 | 1.29E-55 | -1.69E-46 |
| MS.gene058233 | MS.gene74325 | 0.833402 | 5.44E-56 | -1.69E-46 |
| MS.gene058276 | MS.gene74325 | 0.827733 | 1.33E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene74325 | 0.829246 | 5.73E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene74325 | 0.822411 | 2.40E-53 | -1.69E-46 |
| MS.gene059518 | MS.gene74325 | 0.840223 | 9.89E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene74325 | 0.806285 | 8.86E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene74325 | 0.823386 | 1.42E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene74325 | 0.849117 | 3.97E-60 | -1.69E-46 |
| MS.gene061049 | MS.gene74325 | 0.828824 | 7.25E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74325.t1 | MTR_3g027870 | 98.851 | 174 | 2 | 0 | 2 | 175 | 105 | 278 | 3.57e-129 | 363 |
| MS.gene74325.t1 | MTR_3g027870 | 76.437 | 174 | 1 | 1 | 2 | 175 | 105 | 238 | 3.67e-88 | 258 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74325.t1 | AT5G26880 | 76.437 | 174 | 40 | 1 | 2 | 175 | 91 | 263 | 2.97e-100 | 290 |
Find 35 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTAAAATTCACGATTCT+TGG | 0.300968 | 3.1:+20033263 | MS.gene74325:CDS |
| CTGTTGGACTACACTTAGTT+GGG | 0.340052 | 3.1:+20031869 | MS.gene74325:CDS |
| TTGCAATCTAACAACGCTTC+AGG | 0.351137 | 3.1:-20034048 | None:intergenic |
| CAATCCAGCTCGCTTTAGTT+TGG | 0.371247 | 3.1:-20032225 | None:intergenic |
| TGTTGTTCTTGGTAGATTCC+AGG | 0.384664 | 3.1:+20031808 | MS.gene74325:intron |
| GCAATGCAGCCAGTGTTTCC+TGG | 0.391133 | 3.1:-20031826 | None:intergenic |
| CTGACATATGTTTCAACCAT+TGG | 0.414032 | 3.1:-20034105 | None:intergenic |
| TGTTAAAATTCACGATTCTT+GGG | 0.421970 | 3.1:+20033264 | MS.gene74325:CDS |
| CAAACTAAAGCGAGCTGGAT+TGG | 0.426885 | 3.1:+20032226 | MS.gene74325:CDS |
| TCATCCACCTTATATCCTAA+TGG | 0.433769 | 3.1:-20032200 | None:intergenic |
| TTGTTTGGTGCTGAAACTAC+TGG | 0.435992 | 3.1:+20034018 | MS.gene74325:CDS |
| GCTGTTGGACTACACTTAGT+TGG | 0.447539 | 3.1:+20031868 | MS.gene74325:CDS |
| AGCGAGCTGGATTGGACTAC+TGG | 0.454007 | 3.1:+20032234 | MS.gene74325:CDS |
| TTGATAGTTCCACCACCATA+TGG | 0.454641 | 3.1:-20034078 | None:intergenic |
| TGACATATGTTTCAACCATT+GGG | 0.461962 | 3.1:-20034104 | None:intergenic |
| AAAATTCACGATTCTTGGGA+AGG | 0.519743 | 3.1:+20033268 | MS.gene74325:CDS |
| TGGTACAGGAAGGTGAAAAG+AGG | 0.523032 | 3.1:+20033392 | MS.gene74325:intron |
| GATTGCAAAACTGAACCATA+TGG | 0.527813 | 3.1:+20034063 | MS.gene74325:CDS |
| CAATGGTTGAAACATATGTC+AGG | 0.541341 | 3.1:+20034106 | MS.gene74325:CDS |
| ACATGTGCAGCATCAGCTGT+TGG | 0.543758 | 3.1:+20031853 | MS.gene74325:CDS |
| TTGAATCTATCAGTTAGTGT+TGG | 0.550602 | 3.1:+20034132 | MS.gene74325:CDS |
| GTTGCTAGCATTTACAAAGA+GGG | 0.563609 | 3.1:+20033414 | MS.gene74325:CDS |
| CAATCTAACAACGCTTCAGG+TGG | 0.577296 | 3.1:-20034045 | None:intergenic |
| TGGTAGATTCCAGGAAACAC+TGG | 0.577588 | 3.1:+20031817 | MS.gene74325:intron |
| GATACCAAACTAAAGCGAGC+TGG | 0.587642 | 3.1:+20032221 | MS.gene74325:CDS |
| GGTTGCTAGCATTTACAAAG+AGG | 0.596965 | 3.1:+20033413 | MS.gene74325:CDS |
| TTGCTAGCATTTACAAAGAG+GGG | 0.609702 | 3.1:+20033415 | MS.gene74325:CDS |
| GTATCGATACATGTTTCTGA+AGG | 0.615847 | 3.1:-20034207 | None:intergenic |
| TGTTGGACTACACTTAGTTG+GGG | 0.616424 | 3.1:+20031870 | MS.gene74325:CDS |
| TCAGCCATTAGGATATAAGG+TGG | 0.622589 | 3.1:+20032196 | MS.gene74325:intron |
| AACATGTATCGATACTGAGG+AGG | 0.667022 | 3.1:+20034215 | MS.gene74325:CDS |
| AGAAACATGTATCGATACTG+AGG | 0.671735 | 3.1:+20034212 | MS.gene74325:CDS |
| TGGAACTATCAAGATCCCAA+TGG | 0.684890 | 3.1:+20034089 | MS.gene74325:CDS |
| AAAACTGAACCATATGGTGG+TGG | 0.685342 | 3.1:+20034069 | MS.gene74325:CDS |
| TGCAAAACTGAACCATATGG+TGG | 0.723796 | 3.1:+20034066 | MS.gene74325:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAACTGTATATATTTTTTT+AGG | + | chr3.1:20031555-20031574 | MS.gene74325:intron | 10.0% |
| !!! | AGTTTTTTTATGAATATTAT+CGG | + | chr3.1:20031241-20031260 | MS.gene74325:intron | 10.0% |
| !!! | CTAATAATTATATTTTTTGT+TGG | + | chr3.1:20031079-20031098 | MS.gene74325:intron | 10.0% |
| !!! | TTTTATAATGAATAAAGAAT+TGG | - | chr3.1:20033596-20033615 | None:intergenic | 10.0% |
| !!! | TTTTTATGAATATTTCAAAA+AGG | + | chr3.1:20029628-20029647 | MS.gene74325:intron | 10.0% |
| !! | AGATTATGAATATTTCAAAA+AGG | - | chr3.1:20029782-20029801 | None:intergenic | 15.0% |
| !! | ATAGTTATTCGTATATATTT+CGG | - | chr3.1:20029501-20029520 | None:intergenic | 15.0% |
| !! | ATATGTTAATAATAGCAATT+TGG | + | chr3.1:20032573-20032592 | MS.gene74325:intron | 15.0% |
| !! | TAATTAAAACAACAAAATCA+AGG | - | chr3.1:20029271-20029290 | None:intergenic | 15.0% |
| !! | TGCTATTATTAACATATATT+AGG | - | chr3.1:20032570-20032589 | None:intergenic | 15.0% |
| !! | TTGAAATATTCATAATCTTA+GGG | + | chr3.1:20029784-20029803 | MS.gene74325:intron | 15.0% |
| !! | TTGTAATTATTATATTGAGA+GGG | + | chr3.1:20030811-20030830 | MS.gene74325:intron | 15.0% |
| !!! | ACATCTTTGAATTTATATTT+TGG | + | chr3.1:20030216-20030235 | MS.gene74325:intron | 15.0% |
| !!! | AGTATTTTCCATTTTTTAAT+TGG | - | chr3.1:20028640-20028659 | None:intergenic | 15.0% |
| !!! | ATAGTAACTTGTTAAAATAT+TGG | + | chr3.1:20029735-20029754 | MS.gene74325:intron | 15.0% |
| !!! | GTTTTTTCTTTTTTTACTTT+AGG | + | chr3.1:20033718-20033737 | MS.gene74325:intron | 15.0% |
| !!! | TAGTAACTTGTTAAAATATT+GGG | + | chr3.1:20029736-20029755 | MS.gene74325:intron | 15.0% |
| !!! | TATCTCACAATTATTTTTAA+GGG | - | chr3.1:20028820-20028839 | None:intergenic | 15.0% |
| !!! | TTATCTCACAATTATTTTTA+AGG | - | chr3.1:20028821-20028840 | None:intergenic | 15.0% |
| !!! | TTGTAATTTTTATATGCTTA+GGG | - | chr3.1:20029865-20029884 | None:intergenic | 15.0% |
| !!! | TTGTTTTGTTTTTGTTTAAA+TGG | + | chr3.1:20029301-20029320 | MS.gene74325:intron | 15.0% |
| !!! | TTTGAAATATTCATAATCTT+AGG | + | chr3.1:20029783-20029802 | MS.gene74325:intron | 15.0% |
| !!! | TTTGTAATTTTTATATGCTT+AGG | - | chr3.1:20029866-20029885 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTTAGAACTATT+AGG | + | chr3.1:20030352-20030371 | MS.gene74325:intron | 15.0% |
| !! | AAAATAATTGTGAGATAATG+TGG | + | chr3.1:20028823-20028842 | MS.gene74325:intron | 20.0% |
| !! | AACTTTGATACAATACTTAT+AGG | + | chr3.1:20033670-20033689 | MS.gene74325:intron | 20.0% |
| !! | ATTACTTAATATGTGTCAAA+CGG | + | chr3.1:20033882-20033901 | MS.gene74325:intron | 20.0% |
| !! | ATTGAAATCTTTATCTCATT+TGG | + | chr3.1:20032293-20032312 | MS.gene74325:intron | 20.0% |
| !! | CATATATTCAAGTATTCAAA+TGG | - | chr3.1:20029524-20029543 | None:intergenic | 20.0% |
| !! | CTATATTAAAATTGAGTACA+AGG | + | chr3.1:20031581-20031600 | MS.gene74325:intron | 20.0% |
| !! | GTTGTAATTATTATATTGAG+AGG | + | chr3.1:20030810-20030829 | MS.gene74325:intron | 20.0% |
| !! | TAAAATGCCCTATTAAAATT+GGG | + | chr3.1:20028409-20028428 | MS.gene74325:intron | 20.0% |
| !! | TAGTGAATCCAATTAAAAAA+TGG | + | chr3.1:20028629-20028648 | MS.gene74325:intron | 20.0% |
| !! | TTAATGGAAACAAATATAAC+AGG | - | chr3.1:20033222-20033241 | None:intergenic | 20.0% |
| !! | TTCAAAAGAAAATAAAGTCT+TGG | - | chr3.1:20033573-20033592 | None:intergenic | 20.0% |
| !! | TTGTATTTAATAGTGTATAG+TGG | + | chr3.1:20032068-20032087 | MS.gene74325:intron | 20.0% |
| !! | TTGTCTTATGTTAGTTAATT+TGG | + | chr3.1:20029930-20029949 | MS.gene74325:intron | 20.0% |
| !! | TTTAAACCTCACTTATAAAA+TGG | + | chr3.1:20028540-20028559 | MS.gene74325:intron | 20.0% |
| !! | TTTGATATTTATGTTGTTCT+TGG | + | chr3.1:20031797-20031816 | MS.gene74325:intron | 20.0% |
| !!! | AAAATTTTGATTCTTGGTTA+AGG | + | chr3.1:20030753-20030772 | MS.gene74325:intron | 20.0% |
| !!! | AAGACATAGTTTCTTTTTTT+AGG | + | chr3.1:20028761-20028780 | MS.gene74325:intron | 20.0% |
| !!! | AATTTAGTCTTTGAAATTGT+AGG | + | chr3.1:20030470-20030489 | MS.gene74325:intron | 20.0% |
| !!! | CAAATGAAAATTTTGATTCT+TGG | + | chr3.1:20030747-20030766 | MS.gene74325:intron | 20.0% |
| !!! | CTTTTTTTGAAAACTTTGTA+TGG | + | chr3.1:20029203-20029222 | MS.gene74325:intron | 20.0% |
| !!! | TAGTTTTTGTTTTTTTTACC+AGG | + | chr3.1:20032509-20032528 | MS.gene74325:intron | 20.0% |
| !!! | TCATAATATTGGTTATTCTT+TGG | - | chr3.1:20031515-20031534 | None:intergenic | 20.0% |
| !!! | TGTAATTTTTATATGCTTAG+GGG | - | chr3.1:20029864-20029883 | None:intergenic | 20.0% |
| !!! | TTATATTTTGGTAGTTTGTT+TGG | + | chr3.1:20030228-20030247 | MS.gene74325:intron | 20.0% |
| !!! | TTTTGATAGACCATTAATTA+TGG | + | chr3.1:20033947-20033966 | MS.gene74325:intron | 20.0% |
| !!! | TTTTTGCATTGAAAATTGTA+CGG | + | chr3.1:20028704-20028723 | MS.gene74325:intron | 20.0% |
| ! | AAAATCTCTCAATTACCAAA+GGG | + | chr3.1:20031771-20031790 | MS.gene74325:intron | 25.0% |
| ! | AAAATTATAACGAGCGAAAT+GGG | + | chr3.1:20028180-20028199 | MS.gene74325:intron | 25.0% |
| ! | AAAATTATTAATGCGAGTAC+AGG | + | chr3.1:20032807-20032826 | MS.gene74325:intron | 25.0% |
| ! | AAACAATTTCTCTTTACACA+CGG | + | chr3.1:20032911-20032930 | MS.gene74325:intron | 25.0% |
| ! | AAATTGGGACTCAATATTTA+AGG | + | chr3.1:20028424-20028443 | MS.gene74325:intron | 25.0% |
| ! | AAGAACGAAATAAGTAAAAG+TGG | + | chr3.1:20031620-20031639 | MS.gene74325:intron | 25.0% |
| ! | AAGCATATATGATATATCCA+AGG | - | chr3.1:20032266-20032285 | None:intergenic | 25.0% |
| ! | AGAACGAAATAAGTAAAAGT+GGG | + | chr3.1:20031621-20031640 | MS.gene74325:intron | 25.0% |
| ! | AGAGAAATGCTATCATTAAA+GGG | - | chr3.1:20033491-20033510 | None:intergenic | 25.0% |
| ! | AGATGAAACAATATTAGATC+AGG | - | chr3.1:20033166-20033185 | None:intergenic | 25.0% |
| ! | ATAAATATCAAAGAACCCTT+TGG | - | chr3.1:20031789-20031808 | None:intergenic | 25.0% |
| ! | ATATGATATATCCAAGGATA+CGG | - | chr3.1:20032260-20032279 | None:intergenic | 25.0% |
| ! | ATTATAGAATGTTATACCTG+AGG | - | chr3.1:20029463-20029482 | None:intergenic | 25.0% |
| ! | ATTCCTTGAAGAACTAATAT+CGG | - | chr3.1:20029676-20029695 | None:intergenic | 25.0% |
| ! | CTAAAATGCCCTATTAAAAT+TGG | + | chr3.1:20028408-20028427 | MS.gene74325:intron | 25.0% |
| ! | GGTAACATTTAACAAAGTTA+GGG | - | chr3.1:20029655-20029674 | None:intergenic | 25.0% |
| ! | GTGTTCTGTTATTAATTTCA+TGG | - | chr3.1:20029988-20030007 | None:intergenic | 25.0% |
| ! | TAAAATCTCTCAATTACCAA+AGG | + | chr3.1:20031770-20031789 | MS.gene74325:intron | 25.0% |
| ! | TAAAATTATAACGAGCGAAA+TGG | + | chr3.1:20028179-20028198 | MS.gene74325:intron | 25.0% |
| ! | TACAAAGGAACCATAATTAA+TGG | - | chr3.1:20033960-20033979 | None:intergenic | 25.0% |
| ! | TAGAGAAATGCTATCATTAA+AGG | - | chr3.1:20033492-20033511 | None:intergenic | 25.0% |
| ! | TAGATGTACTGAATTTGAAA+AGG | - | chr3.1:20033134-20033153 | None:intergenic | 25.0% |
| ! | TATCTGCAAATTTGTGTTAA+TGG | - | chr3.1:20033238-20033257 | None:intergenic | 25.0% |
| ! | TCAAACCAAACAAATTCTTA+TGG | + | chr3.1:20033619-20033638 | MS.gene74325:intron | 25.0% |
| ! | TGATACAATACTTATAGGAA+TGG | + | chr3.1:20033675-20033694 | MS.gene74325:intron | 25.0% |
| ! | TGTGAATGTATACATTCTTA+AGG | + | chr3.1:20031103-20031122 | MS.gene74325:intron | 25.0% |
| ! | TGTTAAAATTCACGATTCTT+GGG | + | chr3.1:20033264-20033283 | MS.gene74325:CDS | 25.0% |
| ! | TTGTTAAAATTCACGATTCT+TGG | + | chr3.1:20033263-20033282 | MS.gene74325:CDS | 25.0% |
| ! | TTTATGAATATTATCGGAGT+TGG | + | chr3.1:20031247-20031266 | MS.gene74325:intron | 25.0% |
| ! | TTTCCATATATTGTTTGCAA+CGG | - | chr3.1:20033838-20033857 | None:intergenic | 25.0% |
| !! | AAGTTGTCATATTGATTAAC+TGG | + | chr3.1:20031126-20031145 | MS.gene74325:intron | 25.0% |
| !! | AGTTGTCATATTGATTAACT+GGG | + | chr3.1:20031127-20031146 | MS.gene74325:intron | 25.0% |
| !! | ATCATCCATAAGAATTTGTT+TGG | - | chr3.1:20033627-20033646 | None:intergenic | 25.0% |
| !! | GAATTTCCATTTTATAAGTG+AGG | - | chr3.1:20028549-20028568 | None:intergenic | 25.0% |
| !! | GACATTTCAGTTTTCTATAA+AGG | + | chr3.1:20032635-20032654 | MS.gene74325:intron | 25.0% |
| !! | TATTTCAAAATTGTTGGTGA+TGG | + | chr3.1:20033756-20033775 | MS.gene74325:intron | 25.0% |
| !! | TGTTGTTCAGTTTGATTTAA+CGG | - | chr3.1:20032407-20032426 | None:intergenic | 25.0% |
| !! | TTCATTACTGAAGACATTTT+TGG | + | chr3.1:20034243-20034262 | MS.gene74325:CDS | 25.0% |
| !! | TTTTTACCAGGCTTAATATT+CGG | + | chr3.1:20032521-20032540 | MS.gene74325:intron | 25.0% |
| !!! | ATTGAGTCCCAATTTTAATA+GGG | - | chr3.1:20028419-20028438 | None:intergenic | 25.0% |
| !!! | TACAGTTTTAGAGACTAAAT+TGG | + | chr3.1:20030555-20030574 | MS.gene74325:intron | 25.0% |
| !!! | TATTGAGTCCCAATTTTAAT+AGG | - | chr3.1:20028420-20028439 | None:intergenic | 25.0% |
| !!! | TCGTGATTATTTTTTTCAAC+AGG | + | chr3.1:20033294-20033313 | MS.gene74325:CDS | 25.0% |
| !!! | TGTTTAAATGGTGTTATAGA+TGG | + | chr3.1:20029313-20029332 | MS.gene74325:intron | 25.0% |
| AAAAAACTTGGTACCCATAT+GGG | - | chr3.1:20028379-20028398 | None:intergenic | 30.0% | |
| AAAGTAAATTTGCAGTAGAG+GGG | - | chr3.1:20031726-20031745 | None:intergenic | 30.0% | |
| AAAGTCACAGACTAATTTGA+TGG | - | chr3.1:20029582-20029601 | None:intergenic | 30.0% | |
| AACTCGTTAATACGCTAAAA+AGG | + | chr3.1:20031480-20031499 | MS.gene74325:intron | 30.0% | |
| AATTGTTTACTTGTTCCGAT+TGG | - | chr3.1:20032899-20032918 | None:intergenic | 30.0% | |
| AGCAGTTGTATGATAAATCA+TGG | + | chr3.1:20030598-20030617 | MS.gene74325:intron | 30.0% | |
| AGGACTATGTGGATAAATTT+AGG | + | chr3.1:20029702-20029721 | MS.gene74325:intron | 30.0% | |
| AGGTAGTTAATAGCATCAAA+AGG | - | chr3.1:20032962-20032981 | None:intergenic | 30.0% | |
| AGTTTGGATCGAAAATGAAA+AGG | - | chr3.1:20029031-20029050 | None:intergenic | 30.0% | |
| ATAAAGGACTAAAGTAGTTC+CGG | + | chr3.1:20032651-20032670 | MS.gene74325:intron | 30.0% | |
| ATACACTGATGAAGTAAAGT+AGG | + | chr3.1:20030089-20030108 | MS.gene74325:intron | 30.0% | |
| CAAAGTAAATTTGCAGTAGA+GGG | - | chr3.1:20031727-20031746 | None:intergenic | 30.0% | |
| CAACGGATAAAACTTAGATA+TGG | - | chr3.1:20033821-20033840 | None:intergenic | 30.0% | |
| CGGTAACATTTAACAAAGTT+AGG | - | chr3.1:20029656-20029675 | None:intergenic | 30.0% | |
| CGTATATATTTCGGTAAATC+TGG | - | chr3.1:20029492-20029511 | None:intergenic | 30.0% | |
| GAAAAGATAGAGGAATACAA+AGG | - | chr3.1:20032178-20032197 | None:intergenic | 30.0% | |
| GAACGAAATAAGTAAAAGTG+GGG | + | chr3.1:20031622-20031641 | MS.gene74325:intron | 30.0% | |
| GACTGTGATTCACATATAAA+GGG | + | chr3.1:20030385-20030404 | MS.gene74325:intron | 30.0% | |
| GAGAAAATAATCTCTTCTCT+TGG | - | chr3.1:20031367-20031386 | None:intergenic | 30.0% | |
| GTGAGATAATGTGGTTATTA+TGG | + | chr3.1:20028832-20028851 | MS.gene74325:intron | 30.0% | |
| GTTTGGATCGAAAATGAAAA+GGG | - | chr3.1:20029030-20029049 | None:intergenic | 30.0% | |
| TAAAAAACTTGGTACCCATA+TGG | - | chr3.1:20028380-20028399 | None:intergenic | 30.0% | |
| TACACTGATGAAGTAAAGTA+GGG | + | chr3.1:20030090-20030109 | MS.gene74325:intron | 30.0% | |
| TATCCGTTGCAAACAATATA+TGG | + | chr3.1:20033832-20033851 | MS.gene74325:intron | 30.0% | |
| TATCTTACACTACGATAGTT+TGG | - | chr3.1:20031002-20031021 | None:intergenic | 30.0% | |
| TATGTCTTTCGCTAATAGTT+TGG | + | chr3.1:20030258-20030277 | MS.gene74325:intron | 30.0% | |
| TCGTTCACAAAGAATTAGTT+TGG | + | chr3.1:20032602-20032621 | MS.gene74325:intron | 30.0% | |
| TCTAGATCTTATAAGATCCT+AGG | + | chr3.1:20028510-20028529 | MS.gene74325:intron | 30.0% | |
| TGACATATGTTTCAACCATT+GGG | - | chr3.1:20034107-20034126 | None:intergenic | 30.0% | |
| TGACTGTGATTCACATATAA+AGG | + | chr3.1:20030384-20030403 | MS.gene74325:intron | 30.0% | |
| TGATAAATCATGGAATTGCA+AGG | + | chr3.1:20030608-20030627 | MS.gene74325:intron | 30.0% | |
| TGATCCAACAATATTGCAAT+AGG | + | chr3.1:20033643-20033662 | MS.gene74325:intron | 30.0% | |
| TGTAGTTCAGTTTAACAGTT+CGG | + | chr3.1:20032484-20032503 | MS.gene74325:intron | 30.0% | |
| TTCCAAAACAAGGCAATATA+AGG | + | chr3.1:20033920-20033939 | MS.gene74325:intron | 30.0% | |
| TTGAATCTATCAGTTAGTGT+TGG | + | chr3.1:20034132-20034151 | MS.gene74325:CDS | 30.0% | |
| TTGATTCTTGGTTAAGGATT+GGG | + | chr3.1:20030759-20030778 | MS.gene74325:intron | 30.0% | |
| TTTGATTCTTGGTTAAGGAT+TGG | + | chr3.1:20030758-20030777 | MS.gene74325:intron | 30.0% | |
| ! | AAAAACTTTTCTACCATGCA+GGG | + | chr3.1:20032335-20032354 | MS.gene74325:intron | 30.0% |
| ! | AAAGGCGATTATCTTTTGTT+TGG | + | chr3.1:20034003-20034022 | MS.gene74325:CDS | 30.0% |
| ! | AAATTAGTCTGTGACTTTGT+AGG | + | chr3.1:20029584-20029603 | MS.gene74325:intron | 30.0% |
| ! | AATTAGTCTGTGACTTTGTA+GGG | + | chr3.1:20029585-20029604 | MS.gene74325:intron | 30.0% |
| ! | AGAATTAGTTTGGTTCGAAA+AGG | + | chr3.1:20032612-20032631 | MS.gene74325:intron | 30.0% |
| ! | ATGGAATTGCAAGGTTATTT+TGG | + | chr3.1:20030617-20030636 | MS.gene74325:intron | 30.0% |
| ! | ATTCCAGGAACTTAACTTTT+AGG | - | chr3.1:20033330-20033349 | None:intergenic | 30.0% |
| ! | GAATTAGTTTGGTTCGAAAA+GGG | + | chr3.1:20032613-20032632 | MS.gene74325:intron | 30.0% |
| ! | GTTGTCATATTGATTAACTG+GGG | + | chr3.1:20031128-20031147 | MS.gene74325:intron | 30.0% |
| ! | TCACGCTATTTCAAAATTGT+TGG | + | chr3.1:20033750-20033769 | MS.gene74325:intron | 30.0% |
| ! | TGGTCTTCGAATATGTTTTT+AGG | + | chr3.1:20030278-20030297 | MS.gene74325:intron | 30.0% |
| ! | TTACCGATATTAGTTCTTCA+AGG | + | chr3.1:20029670-20029689 | MS.gene74325:intron | 30.0% |
| ! | TTTTCAGCCATTAGGATATA+AGG | + | chr3.1:20032193-20032212 | MS.gene74325:intron | 30.0% |
| !! | AAACTTAGATATGGTGCTAT+AGG | - | chr3.1:20033812-20033831 | None:intergenic | 30.0% |
| !! | TTTAACGGATCGTAAGTTTT+TGG | - | chr3.1:20032392-20032411 | None:intergenic | 30.0% |
| !!! | ATATGGGTACCAAGTTTTTT+AGG | + | chr3.1:20028379-20028398 | MS.gene74325:intron | 30.0% |
| !!! | TTCCTTATATTGCCTTGTTT+TGG | - | chr3.1:20033925-20033944 | None:intergenic | 30.0% |
| AAAAGTCCTGCAACATACAA+AGG | - | chr3.1:20033975-20033994 | None:intergenic | 35.0% | |
| AAAATTCACGATTCTTGGGA+AGG | + | chr3.1:20033268-20033287 | MS.gene74325:CDS | 35.0% | |
| AAATACTAACAAGTGCCCTA+AGG | + | chr3.1:20028653-20028672 | MS.gene74325:intron | 35.0% | |
| AAATTTGTCCCTGACTTTGT+AGG | - | chr3.1:20029826-20029845 | None:intergenic | 35.0% | |
| AACTTCGTCCCATTGTAAAA+GGG | - | chr3.1:20032842-20032861 | None:intergenic | 35.0% | |
| AAGTTTGTGCTATAGGATTG+TGG | + | chr3.1:20031172-20031191 | MS.gene74325:intron | 35.0% | |
| AATACTAACAAGTGCCCTAA+GGG | + | chr3.1:20028654-20028673 | MS.gene74325:intron | 35.0% | |
| AATTTGTCCCTGACTTTGTA+GGG | - | chr3.1:20029825-20029844 | None:intergenic | 35.0% | |
| ACACTGATGAAGTAAAGTAG+GGG | + | chr3.1:20030091-20030110 | MS.gene74325:intron | 35.0% | |
| ACCGAAAATAACCAAACTGT+GGG | - | chr3.1:20032465-20032484 | None:intergenic | 35.0% | |
| ACTACCAAAAGACACATTTG+TGG | - | chr3.1:20029894-20029913 | None:intergenic | 35.0% | |
| ACTAGTAGACTGTTCGTTAA+TGG | - | chr3.1:20033005-20033024 | None:intergenic | 35.0% | |
| AGTCTTGGATATTTACTTCC+TGG | - | chr3.1:20033558-20033577 | None:intergenic | 35.0% | |
| ATAAACCACGATAGACAGAT+AGG | - | chr3.1:20033035-20033054 | None:intergenic | 35.0% | |
| ATAATTACGACGAAGATTCC+AGG | - | chr3.1:20033345-20033364 | None:intergenic | 35.0% | |
| ATGCTTAAACAATGCCCTTA+GGG | - | chr3.1:20028671-20028690 | None:intergenic | 35.0% | |
| CAATGGTTGAAACATATGTC+AGG | + | chr3.1:20034106-20034125 | MS.gene74325:CDS | 35.0% | |
| CAGTGTTAAGTTTGTGCTAT+AGG | + | chr3.1:20031165-20031184 | MS.gene74325:intron | 35.0% | |
| CATCCTAAAAGTTAAGTTCC+TGG | + | chr3.1:20033324-20033343 | MS.gene74325:intron | 35.0% | |
| CCAAAGTAAATTTGCAGTAG+AGG | - | chr3.1:20031728-20031747 | None:intergenic | 35.0% | |
| CCTCTACTGCAAATTTACTT+TGG | + | chr3.1:20031725-20031744 | MS.gene74325:intron | 35.0% | |
| CTAATAAACTAGACTCCTTG+AGG | + | chr3.1:20030916-20030935 | MS.gene74325:intron | 35.0% | |
| CTAGTAGACTGTTCGTTAAT+GGG | - | chr3.1:20033004-20033023 | None:intergenic | 35.0% | |
| CTGACATATGTTTCAACCAT+TGG | - | chr3.1:20034108-20034127 | None:intergenic | 35.0% | |
| CTGTACTTGTCTCCATTATT+TGG | + | chr3.1:20033372-20033391 | MS.gene74325:intron | 35.0% | |
| GACATCTGTTAGAAATCTCA+AGG | - | chr3.1:20030317-20030336 | None:intergenic | 35.0% | |
| GAGAATGAGATAAAGAAGGA+AGG | + | chr3.1:20029361-20029380 | MS.gene74325:intron | 35.0% | |
| GAGGTTTAAAAGTGAAACCT+AGG | - | chr3.1:20028530-20028549 | None:intergenic | 35.0% | |
| GATTGCAAAACTGAACCATA+TGG | + | chr3.1:20034063-20034082 | MS.gene74325:CDS | 35.0% | |
| GGTCATGCCTTACAATTAAT+CGG | + | chr3.1:20028445-20028464 | MS.gene74325:intron | 35.0% | |
| GTCATGCCTTACAATTAATC+GGG | + | chr3.1:20028446-20028465 | MS.gene74325:intron | 35.0% | |
| GTTATGCAACACTGCTATAA+CGG | + | chr3.1:20032022-20032041 | MS.gene74325:intron | 35.0% | |
| GTTCTTCAAGGAATATGCTA+AGG | + | chr3.1:20029682-20029701 | MS.gene74325:intron | 35.0% | |
| GTTGCTAGCATTTACAAAGA+GGG | + | chr3.1:20033414-20033433 | MS.gene74325:CDS | 35.0% | |
| TAAACGACATCATAAGAGAC+AGG | - | chr3.1:20033534-20033553 | None:intergenic | 35.0% | |
| TAACCAAAGAGGTAAGAACT+AGG | - | chr3.1:20031308-20031327 | None:intergenic | 35.0% | |
| TAACTGGGGAAGTTTAGTTA+GGG | + | chr3.1:20031142-20031161 | MS.gene74325:intron | 35.0% | |
| TAACTTCGTCCCATTGTAAA+AGG | - | chr3.1:20032843-20032862 | None:intergenic | 35.0% | |
| TACAAACCGAATATTAAGCC+TGG | - | chr3.1:20032530-20032549 | None:intergenic | 35.0% | |
| TACAAAGTCAGGGACAAATT+TGG | + | chr3.1:20029825-20029844 | MS.gene74325:intron | 35.0% | |
| TACATTTGTCTTTGAACGTG+AGG | + | chr3.1:20030146-20030165 | MS.gene74325:intron | 35.0% | |
| TAGAGGATAATTGAGCCAAT+CGG | + | chr3.1:20032881-20032900 | MS.gene74325:intron | 35.0% | |
| TAGCCTAGACCTAAAAAACT+TGG | - | chr3.1:20028391-20028410 | None:intergenic | 35.0% | |
| TCATCCACCTTATATCCTAA+TGG | - | chr3.1:20032203-20032222 | None:intergenic | 35.0% | |
| TCGTCCTATTGCAATATTGT+TGG | - | chr3.1:20033650-20033669 | None:intergenic | 35.0% | |
| TCTAACAGATGTCACTCTTT+GGG | + | chr3.1:20030324-20030343 | MS.gene74325:intron | 35.0% | |
| TGCTGAGAATGAGATAAAGA+AGG | + | chr3.1:20029357-20029376 | MS.gene74325:intron | 35.0% | |
| TTAACTGGGGAAGTTTAGTT+AGG | + | chr3.1:20031141-20031160 | MS.gene74325:intron | 35.0% | |
| TTACAATTAATCGGGCTTGA+CGG | + | chr3.1:20028454-20028473 | MS.gene74325:intron | 35.0% | |
| TTCTAACAGATGTCACTCTT+TGG | + | chr3.1:20030323-20030342 | MS.gene74325:intron | 35.0% | |
| TTGACGAAAAAGAGAGAGTT+TGG | - | chr3.1:20029047-20029066 | None:intergenic | 35.0% | |
| TTGCTAGCATTTACAAAGAG+GGG | + | chr3.1:20033415-20033434 | MS.gene74325:CDS | 35.0% | |
| TTGTCTCCATTATTTGGTAC+AGG | + | chr3.1:20033378-20033397 | MS.gene74325:intron | 35.0% | |
| ! | AAGATCTAGAGCTGTCAAAA+CGG | - | chr3.1:20028500-20028519 | None:intergenic | 35.0% |
| ! | AAGCTTTGTATACAAGCTAG+AGG | + | chr3.1:20032864-20032883 | MS.gene74325:intron | 35.0% |
| ! | AGAAACATGTATCGATACTG+AGG | + | chr3.1:20034212-20034231 | MS.gene74325:CDS | 35.0% |
| ! | CAGGACTTTTCATACAGAAA+AGG | + | chr3.1:20033985-20034004 | MS.gene74325:intron | 35.0% |
| ! | CTCTCTTTTCTTCCAAAACA+AGG | + | chr3.1:20033910-20033929 | MS.gene74325:intron | 35.0% |
| ! | GAAAAACTTTTCTACCATGC+AGG | + | chr3.1:20032334-20032353 | MS.gene74325:intron | 35.0% |
| ! | GACTCTAACCCTTTTACAAT+GGG | + | chr3.1:20032831-20032850 | MS.gene74325:intron | 35.0% |
| ! | GTATCGATACATGTTTCTGA+AGG | - | chr3.1:20034210-20034229 | None:intergenic | 35.0% |
| ! | TAACCTAGTTCTTACCTCTT+TGG | + | chr3.1:20031302-20031321 | MS.gene74325:intron | 35.0% |
| ! | TCTTATGATGTCGTTTATCC+AGG | + | chr3.1:20033537-20033556 | MS.gene74325:intron | 35.0% |
| ! | TGACTCTAACCCTTTTACAA+TGG | + | chr3.1:20032830-20032849 | MS.gene74325:intron | 35.0% |
| ! | TTTGTTATACCCGTTCAGTT+CGG | + | chr3.1:20032709-20032728 | MS.gene74325:intron | 35.0% |
| !! | GTGTCTTTTGGTAGTTAGTT+TGG | + | chr3.1:20029899-20029918 | MS.gene74325:intron | 35.0% |
| !! | TAGCATCAAAAGGAGTACTT+AGG | - | chr3.1:20032952-20032971 | None:intergenic | 35.0% |
| !! | TCCCACAGTTTGGTTATTTT+CGG | + | chr3.1:20032461-20032480 | MS.gene74325:intron | 35.0% |
| !!! | GTACCAAGTTTTTTAGGTCT+AGG | + | chr3.1:20028385-20028404 | MS.gene74325:intron | 35.0% |
| AAAACTGAACCATATGGTGG+TGG | + | chr3.1:20034069-20034088 | MS.gene74325:CDS | 40.0% | |
| AAAGTAGTTCCGGTTAGGAT+CGG | + | chr3.1:20032661-20032680 | MS.gene74325:intron | 40.0% | |
| AAAGTCAGGGACAAATTTGG+TGG | + | chr3.1:20029828-20029847 | MS.gene74325:intron | 40.0% | |
| AATTCTAGTACTACCCTGCA+TGG | - | chr3.1:20032351-20032370 | None:intergenic | 40.0% | |
| ACCCAGGAACTATACTAACA+TGG | - | chr3.1:20029552-20029571 | None:intergenic | 40.0% | |
| ACTCAAATCTGAGAGCAAGA+AGG | - | chr3.1:20031224-20031243 | None:intergenic | 40.0% | |
| AGCCATGTTAGTATAGTTCC+TGG | + | chr3.1:20029547-20029566 | MS.gene74325:intron | 40.0% | |
| AGCGTATTAACGAGTTCATC+AGG | - | chr3.1:20031476-20031495 | None:intergenic | 40.0% | |
| ATGGTTCCTTTGTATGTTGC+AGG | + | chr3.1:20033966-20033985 | MS.gene74325:intron | 40.0% | |
| ATTTGTCTTTGAACGTGAGG+CGG | + | chr3.1:20030149-20030168 | MS.gene74325:intron | 40.0% | |
| CACAATAGCGTAGCAGAATT+CGG | - | chr3.1:20032110-20032129 | None:intergenic | 40.0% | |
| CACATATAAAGGGACTGTGA+TGG | + | chr3.1:20030395-20030414 | MS.gene74325:intron | 40.0% | |
| CACCGAAAATAACCAAACTG+TGG | - | chr3.1:20032466-20032485 | None:intergenic | 40.0% | |
| CACCTTCCTGTACCAAATAA+TGG | - | chr3.1:20033387-20033406 | None:intergenic | 40.0% | |
| CACGATAGACAGATAGGTAA+TGG | - | chr3.1:20033029-20033048 | None:intergenic | 40.0% | |
| CAGACTAAACTAGCTATCTG+CGG | + | chr3.1:20028339-20028358 | MS.gene74325:intron | 40.0% | |
| CATTACCTATCTGTCTATCG+TGG | + | chr3.1:20033027-20033046 | MS.gene74325:intron | 40.0% | |
| CCTAATGGCTGAAAAGATAG+AGG | - | chr3.1:20032188-20032207 | None:intergenic | 40.0% | |
| CTCCATTATTTGGTACAGGA+AGG | + | chr3.1:20033382-20033401 | MS.gene74325:intron | 40.0% | |
| CTGTTGGACTACACTTAGTT+GGG | + | chr3.1:20031869-20031888 | MS.gene74325:CDS | 40.0% | |
| GAACGGGTATAACAAAGGTT+TGG | - | chr3.1:20032705-20032724 | None:intergenic | 40.0% | |
| GAACTGAACGGGTATAACAA+AGG | - | chr3.1:20032710-20032729 | None:intergenic | 40.0% | |
| GAGGGGAACAAAAATTCACT+CGG | + | chr3.1:20033432-20033451 | MS.gene74325:CDS | 40.0% | |
| GATGCTTAAACAATGCCCTT+AGG | - | chr3.1:20028672-20028691 | None:intergenic | 40.0% | |
| GCCATGTTAGTATAGTTCCT+GGG | + | chr3.1:20029548-20029567 | MS.gene74325:intron | 40.0% | |
| GGAATATGCTAAGGACTATG+TGG | + | chr3.1:20029691-20029710 | MS.gene74325:intron | 40.0% | |
| GGTCTCATGTTCAATTCTTC+CGG | - | chr3.1:20029250-20029269 | None:intergenic | 40.0% | |
| GGTTGCTAGCATTTACAAAG+AGG | + | chr3.1:20033413-20033432 | MS.gene74325:CDS | 40.0% | |
| GTCAAGCCCGATTAATTGTA+AGG | - | chr3.1:20028455-20028474 | None:intergenic | 40.0% | |
| GTTATACCTGAGGTGAAACA+AGG | - | chr3.1:20029453-20029472 | None:intergenic | 40.0% | |
| TACAATTAATCGGGCTTGAC+GGG | + | chr3.1:20028455-20028474 | MS.gene74325:intron | 40.0% | |
| TAGACTGTTCGTTAATGGGA+AGG | - | chr3.1:20033000-20033019 | None:intergenic | 40.0% | |
| TCAGCCATTAGGATATAAGG+TGG | + | chr3.1:20032196-20032215 | MS.gene74325:intron | 40.0% | |
| TGATGAAGTAAAGTAGGGGT+AGG | + | chr3.1:20030095-20030114 | MS.gene74325:intron | 40.0% | |
| TGCAAAACTGAACCATATGG+TGG | + | chr3.1:20034066-20034085 | MS.gene74325:CDS | 40.0% | |
| TGGAACTATCAAGATCCCAA+TGG | + | chr3.1:20034089-20034108 | MS.gene74325:CDS | 40.0% | |
| TGTTGGACTACACTTAGTTG+GGG | + | chr3.1:20031870-20031889 | MS.gene74325:CDS | 40.0% | |
| TGTTGTTCTTGGTAGATTCC+AGG | + | chr3.1:20031808-20031827 | MS.gene74325:intron | 40.0% | |
| TTCCGTAAAACCGAACTGAA+CGG | - | chr3.1:20032722-20032741 | None:intergenic | 40.0% | |
| TTGCAATCTAACAACGCTTC+AGG | - | chr3.1:20034051-20034070 | None:intergenic | 40.0% | |
| ! | AACATGTATCGATACTGAGG+AGG | + | chr3.1:20034215-20034234 | MS.gene74325:CDS | 40.0% |
| ! | AGAAGGTTTTTGCACATGAC+AGG | - | chr3.1:20031207-20031226 | None:intergenic | 40.0% |
| ! | AGATCTAGAGCTGTCAAAAC+GGG | - | chr3.1:20028499-20028518 | None:intergenic | 40.0% |
| ! | AGGGTTTTGCTTACAAGTGA+CGG | - | chr3.1:20028801-20028820 | None:intergenic | 40.0% |
| ! | ATTACTGGTAGTGAGAGAAG+AGG | - | chr3.1:20029107-20029126 | None:intergenic | 40.0% |
| ! | CAACAGAGTTCTAACCAAAG+AGG | - | chr3.1:20031319-20031338 | None:intergenic | 40.0% |
| ! | CCTCTATCTTTTCAGCCATT+AGG | + | chr3.1:20032185-20032204 | MS.gene74325:intron | 40.0% |
| ! | GCATCCACAAATGTGTCTTT+TGG | + | chr3.1:20029887-20029906 | MS.gene74325:intron | 40.0% |
| ! | GTTTTACGGAACTGTTGCAA+TGG | + | chr3.1:20032731-20032750 | MS.gene74325:intron | 40.0% |
| ! | TCAAGATTTAGAGTACGCGT+AGG | - | chr3.1:20033090-20033109 | None:intergenic | 40.0% |
| ! | TTCGCAGTGTTGTTAAATCG+CGG | - | chr3.1:20032142-20032161 | None:intergenic | 40.0% |
| ! | TTGATAGTTCCACCACCATA+TGG | - | chr3.1:20034081-20034100 | None:intergenic | 40.0% |
| ! | TTTTTGCACATGACAGGTCA+TGG | - | chr3.1:20031201-20031220 | None:intergenic | 40.0% |
| !! | CATTTTGACACACACATGAG+AGG | - | chr3.1:20030717-20030736 | None:intergenic | 40.0% |
| !! | TCAAAAGGAGTACTTAGGTC+TGG | - | chr3.1:20032947-20032966 | None:intergenic | 40.0% |
| !! | TTGTTTGGTGCTGAAACTAC+TGG | + | chr3.1:20034018-20034037 | MS.gene74325:CDS | 40.0% |
| !!! | CTGAAGACATTTTTGGCTGA+TGG | + | chr3.1:20034250-20034269 | MS.gene74325:CDS | 40.0% |
| ACGGAACTGTTGCAATGGTT+CGG | + | chr3.1:20032736-20032755 | MS.gene74325:intron | 45.0% | |
| AGTCTCAAGGCAACAGGAAA+TGG | - | chr3.1:20028971-20028990 | None:intergenic | 45.0% | |
| AGTGAGAGAAGAGGAAATGG+AGG | - | chr3.1:20029098-20029117 | None:intergenic | 45.0% | |
| ATTGAGAGGGCAGAGAAAGA+GGG | + | chr3.1:20030824-20030843 | MS.gene74325:intron | 45.0% | |
| CAAACTAAAGCGAGCTGGAT+TGG | + | chr3.1:20032226-20032245 | MS.gene74325:CDS | 45.0% | |
| CAATCCAGCTCGCTTTAGTT+TGG | - | chr3.1:20032228-20032247 | None:intergenic | 45.0% | |
| CAATCTAACAACGCTTCAGG+TGG | - | chr3.1:20034048-20034067 | None:intergenic | 45.0% | |
| CTCATGTTCAATTCTTCCGG+TGG | - | chr3.1:20029247-20029266 | None:intergenic | 45.0% | |
| GAAGAGGAAATGGAGGGAAA+AGG | - | chr3.1:20029091-20029110 | None:intergenic | 45.0% | |
| GAAGTAAAGTAGGGGTAGGT+GGG | + | chr3.1:20030099-20030118 | MS.gene74325:intron | 45.0% | |
| GAGAGAGAGAGAGAGATTAC+TGG | - | chr3.1:20029122-20029141 | None:intergenic | 45.0% | |
| GAGTTCTGCTTGACCCTTAT+TGG | + | chr3.1:20033062-20033081 | MS.gene74325:intron | 45.0% | |
| GATACCAAACTAAAGCGAGC+TGG | + | chr3.1:20032221-20032240 | MS.gene74325:CDS | 45.0% | |
| GATTTCAGTCTCAAGGCAAC+AGG | - | chr3.1:20028977-20028996 | None:intergenic | 45.0% | |
| GCTGTTGGACTACACTTAGT+TGG | + | chr3.1:20031868-20031887 | MS.gene74325:CDS | 45.0% | |
| GGACTAAAGTAGTTCCGGTT+AGG | + | chr3.1:20032656-20032675 | MS.gene74325:intron | 45.0% | |
| GGTAGTGAGAGAAGAGGAAA+TGG | - | chr3.1:20029101-20029120 | None:intergenic | 45.0% | |
| GTCTCGTGATTCTTTCCTCA+AGG | - | chr3.1:20030934-20030953 | None:intergenic | 45.0% | |
| GTGAGAGAAGAGGAAATGGA+GGG | - | chr3.1:20029097-20029116 | None:intergenic | 45.0% | |
| GTTGAGGGATTTCAGTCTCA+AGG | - | chr3.1:20028984-20029003 | None:intergenic | 45.0% | |
| TAGGATCGGAAACACAGAAC+AGG | + | chr3.1:20032675-20032694 | MS.gene74325:intron | 45.0% | |
| TATTGAGAGGGCAGAGAAAG+AGG | + | chr3.1:20030823-20030842 | MS.gene74325:intron | 45.0% | |
| TCCGTAAAACCGAACTGAAC+GGG | - | chr3.1:20032721-20032740 | None:intergenic | 45.0% | |
| TCGTGAACTATCCCACAGTT+TGG | + | chr3.1:20032451-20032470 | MS.gene74325:intron | 45.0% | |
| TCTCTCTCTCTCTCTCTTTG+TGG | + | chr3.1:20029156-20029175 | MS.gene74325:intron | 45.0% | |
| TCTGTGTTTCCGATCCTAAC+CGG | - | chr3.1:20032673-20032692 | None:intergenic | 45.0% | |
| TGAAGTAAAGTAGGGGTAGG+TGG | + | chr3.1:20030098-20030117 | MS.gene74325:intron | 45.0% | |
| TGGTACAGGAAGGTGAAAAG+AGG | + | chr3.1:20033392-20033411 | MS.gene74325:intron | 45.0% | |
| TGGTAGATTCCAGGAAACAC+TGG | + | chr3.1:20031817-20031836 | MS.gene74325:intron | 45.0% | |
| ! | AAGGAAGGTAGTTTGCCACA+TGG | + | chr3.1:20029376-20029395 | MS.gene74325:intron | 45.0% |
| ! | ACCCGTTCAGTTCGGTTTTA+CGG | + | chr3.1:20032717-20032736 | MS.gene74325:intron | 45.0% |
| ! | AGTTGTCCTTGTTTCACCTC+AGG | + | chr3.1:20029444-20029463 | MS.gene74325:intron | 45.0% |
| ! | ATCGGAGTTGGTTAAGTAGC+AGG | + | chr3.1:20031259-20031278 | MS.gene74325:intron | 45.0% |
| ! | ATTTGATGGCTTACTCACCC+AGG | - | chr3.1:20029568-20029587 | None:intergenic | 45.0% |
| !! | AAGAGTGCCCTACAAAGTCA+GGG | + | chr3.1:20029815-20029834 | MS.gene74325:intron | 45.0% |
| !! | TAAGAGTGCCCTACAAAGTC+AGG | + | chr3.1:20029814-20029833 | MS.gene74325:intron | 45.0% |
| !! | TAAAAATATATTTAATATCT+AGG | + | chr3.1:20028303-20028322 | MS.gene74325:intron | 5.0% |
| !!! | AATAATTATTTTCATAATAT+TGG | - | chr3.1:20031526-20031545 | None:intergenic | 5.0% |
| AATGGAGGGAAAAGGTGAGG+TGG | - | chr3.1:20029083-20029102 | None:intergenic | 50.0% | |
| ACACTCACCACTCTCTGCAT+CGG | + | chr3.1:20028900-20028919 | MS.gene74325:intron | 50.0% | |
| ACATGTGCAGCATCAGCTGT+TGG | + | chr3.1:20031853-20031872 | MS.gene74325:CDS | 50.0% | |
| AGAGTGGTGAGTGTTCCACT+TGG | - | chr3.1:20028894-20028913 | None:intergenic | 50.0% | |
| AGCAGGAACTGCATTTGAGC+TGG | + | chr3.1:20031276-20031295 | MS.gene74325:intron | 50.0% | |
| AGTACGCGTAGGAGCCAATA+AGG | - | chr3.1:20033079-20033098 | None:intergenic | 50.0% | |
| AGTGGGGTTAGAGCAAGTCT+TGG | + | chr3.1:20031638-20031657 | MS.gene74325:intron | 50.0% | |
| ATGGAGGGAAAAGGTGAGGT+GGG | - | chr3.1:20029082-20029101 | None:intergenic | 50.0% | |
| CACTCTCTGCATCGGATAGA+CGG | + | chr3.1:20028908-20028927 | MS.gene74325:intron | 50.0% | |
| CCATACGGTCTAGCCCATAT+GGG | + | chr3.1:20028363-20028382 | MS.gene74325:intron | 50.0% | |
| CTTCCGGTGGCAATTTCTGT+GGG | - | chr3.1:20029234-20029253 | None:intergenic | 50.0% | |
| GAAGGTGACTAACTCGATGG+AGG | - | chr3.1:20032982-20033001 | None:intergenic | 50.0% | |
| GGAAATGGAGGGAAAAGGTG+AGG | - | chr3.1:20029086-20029105 | None:intergenic | 50.0% | |
| GTACGCGTAGGAGCCAATAA+GGG | - | chr3.1:20033078-20033097 | None:intergenic | 50.0% | |
| TAGCCCACAGAAATTGCCAC+CGG | + | chr3.1:20029228-20029247 | MS.gene74325:intron | 50.0% | |
| TCTTCCGGTGGCAATTTCTG+TGG | - | chr3.1:20029235-20029254 | None:intergenic | 50.0% | |
| TGGGAAGGTGACTAACTCGA+TGG | - | chr3.1:20032985-20033004 | None:intergenic | 50.0% | |
| TTTGTAGGGCGCGCTCAAAT+AGG | + | chr3.1:20029599-20029618 | MS.gene74325:intron | 50.0% | |
| ! | AGTGAGAGCATGCTTCCAAG+TGG | + | chr3.1:20028876-20028895 | MS.gene74325:intron | 50.0% |
| ! | ATTAATCGGGCTTGACGGGT+CGG | + | chr3.1:20028459-20028478 | MS.gene74325:intron | 50.0% |
| ! | GGTAGTTTGCCACATGGTGT+TGG | + | chr3.1:20029382-20029401 | MS.gene74325:intron | 50.0% |
| ! | TTGCCACATGGTGTTGGAGA+GGG | + | chr3.1:20029388-20029407 | MS.gene74325:intron | 50.0% |
| ! | TTTGCCACATGGTGTTGGAG+AGG | + | chr3.1:20029387-20029406 | MS.gene74325:intron | 50.0% |
| !! | CAAAACGGGCTAGCTCGTAT+GGG | - | chr3.1:20028485-20028504 | None:intergenic | 50.0% |
| !! | CCATATGGGCTAGACCGTAT+GGG | - | chr3.1:20028365-20028384 | None:intergenic | 50.0% |
| !! | TCAAAACGGGCTAGCTCGTA+TGG | - | chr3.1:20028486-20028505 | None:intergenic | 50.0% |
| ATCCCCTCTCCAACACCATG+TGG | - | chr3.1:20029394-20029413 | None:intergenic | 55.0% | |
| CCCATACGGTCTAGCCCATA+TGG | + | chr3.1:20028362-20028381 | MS.gene74325:intron | 55.0% | |
| CGTCTATCCGATGCAGAGAG+TGG | - | chr3.1:20028910-20028929 | None:intergenic | 55.0% | |
| CTAGCTATCTGCGGCCCATA+CGG | + | chr3.1:20028348-20028367 | MS.gene74325:intron | 55.0% | |
| GCAATGCAGCCAGTGTTTCC+TGG | - | chr3.1:20031829-20031848 | None:intergenic | 55.0% | |
| GCAGCAGCATTGTGAAGCGA+TGG | + | chr3.1:20028940-20028959 | MS.gene74325:intron | 55.0% | |
| TGGACTACTGGCCGTATCCT+TGG | + | chr3.1:20032246-20032265 | MS.gene74325:intron | 55.0% | |
| ! | AGCGAGCTGGATTGGACTAC+TGG | + | chr3.1:20032234-20032253 | MS.gene74325:CDS | 55.0% |
| ! | TGCCACATGGTGTTGGAGAG+GGG | + | chr3.1:20029389-20029408 | MS.gene74325:intron | 55.0% |
| ! | TGCTGCTGCTGCTAGGTTGA+GGG | - | chr3.1:20028999-20029018 | None:intergenic | 55.0% |
| !! | CCCATATGGGCTAGACCGTA+TGG | - | chr3.1:20028366-20028385 | None:intergenic | 55.0% |
| CTGCTGCTGCTGCTAGGTTG+AGG | - | chr3.1:20029000-20029019 | None:intergenic | 60.0% | |
| TTGCTGCTGCTGCTGCTGCT+AGG | - | chr3.1:20029360-20029341 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 20028147 | 20034269 | 20028147 | ID=MS.gene74325 |
| chr3.1 | mRNA | 20028147 | 20034269 | 20028147 | ID=MS.gene74325.t1;Parent=MS.gene74325 |
| chr3.1 | exon | 20028147 | 20028149 | 20028147 | ID=MS.gene74325.t1.exon1;Parent=MS.gene74325.t1 |
| chr3.1 | CDS | 20028147 | 20028149 | 20028147 | ID=cds.MS.gene74325.t1;Parent=MS.gene74325.t1 |
| chr3.1 | exon | 20031823 | 20031891 | 20031823 | ID=MS.gene74325.t1.exon2;Parent=MS.gene74325.t1 |
| chr3.1 | CDS | 20031823 | 20031891 | 20031823 | ID=cds.MS.gene74325.t1;Parent=MS.gene74325.t1 |
| chr3.1 | exon | 20032200 | 20032258 | 20032200 | ID=MS.gene74325.t1.exon3;Parent=MS.gene74325.t1 |
| chr3.1 | CDS | 20032200 | 20032258 | 20032200 | ID=cds.MS.gene74325.t1;Parent=MS.gene74325.t1 |
| chr3.1 | exon | 20033255 | 20033315 | 20033255 | ID=MS.gene74325.t1.exon4;Parent=MS.gene74325.t1 |
| chr3.1 | CDS | 20033255 | 20033315 | 20033255 | ID=cds.MS.gene74325.t1;Parent=MS.gene74325.t1 |
| chr3.1 | exon | 20033400 | 20033453 | 20033400 | ID=MS.gene74325.t1.exon5;Parent=MS.gene74325.t1 |
| chr3.1 | CDS | 20033400 | 20033453 | 20033400 | ID=cds.MS.gene74325.t1;Parent=MS.gene74325.t1 |
| chr3.1 | exon | 20033988 | 20034269 | 20033988 | ID=MS.gene74325.t1.exon6;Parent=MS.gene74325.t1 |
| chr3.1 | CDS | 20033988 | 20034269 | 20033988 | ID=cds.MS.gene74325.t1;Parent=MS.gene74325.t1 |
| Gene Sequence |
| Protein sequence |
