Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81745.t1 | XP_013467989.1 | 98 | 401 | 8 | 0 | 1 | 401 | 84 | 484 | 4.00E-214 | 753.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81745.t1 | Q9LXJ0 | 82.8 | 389 | 62 | 2 | 13 | 401 | 90 | 473 | 2.2e-176 | 619.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81745.t1 | A0A072VK74 | 98.0 | 401 | 8 | 0 | 1 | 401 | 84 | 484 | 2.9e-214 | 753.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene81745 | 0.816586 | 5.12E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene81745 | 0.829673 | 4.51E-55 | -1.69E-46 |
| MS.gene049378 | MS.gene81745 | 0.812992 | 3.21E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene81745 | 0.846237 | 2.46E-59 | -1.69E-46 |
| MS.gene050226 | MS.gene81745 | 0.827737 | 1.33E-54 | -1.69E-46 |
| MS.gene050227 | MS.gene81745 | 0.842069 | 3.24E-58 | -1.69E-46 |
| MS.gene050228 | MS.gene81745 | 0.835683 | 1.45E-56 | -1.69E-46 |
| MS.gene050330 | MS.gene81745 | -0.829802 | 4.20E-55 | -1.69E-46 |
| MS.gene050558 | MS.gene81745 | 0.848372 | 6.39E-60 | -1.69E-46 |
| MS.gene050623 | MS.gene81745 | -0.820665 | 6.08E-53 | -1.69E-46 |
| MS.gene050629 | MS.gene81745 | -0.806315 | 8.73E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene81745 | 0.820532 | 6.53E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene81745 | 0.821799 | 3.33E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene81745 | 0.802742 | 4.86E-49 | -1.69E-46 |
| MS.gene051257 | MS.gene81745 | 0.817834 | 2.68E-52 | -1.69E-46 |
| MS.gene051265 | MS.gene81745 | 0.804622 | 1.98E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene81745 | 0.839752 | 1.31E-57 | -1.69E-46 |
| MS.gene051663 | MS.gene81745 | 0.8463 | 2.37E-59 | -1.69E-46 |
| MS.gene051860 | MS.gene81745 | 0.820423 | 6.91E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene81745 | 0.812392 | 4.34E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene81745 | 0.825143 | 5.50E-54 | -1.69E-46 |
| MS.gene052600 | MS.gene81745 | 0.800797 | 1.22E-48 | -1.69E-46 |
| MS.gene052778 | MS.gene81745 | 0.807726 | 4.39E-50 | -1.69E-46 |
| MS.gene052858 | MS.gene81745 | 0.800474 | 1.42E-48 | -1.69E-46 |
| MS.gene052860 | MS.gene81745 | 0.804402 | 2.20E-49 | -1.69E-46 |
| MS.gene053085 | MS.gene81745 | 0.802743 | 4.85E-49 | -1.69E-46 |
| MS.gene053630 | MS.gene81745 | 0.827176 | 1.81E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene81745 | 0.847094 | 1.44E-59 | -1.69E-46 |
| MS.gene054083 | MS.gene81745 | 0.802369 | 5.80E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene81745 | 0.801861 | 7.37E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene81745 | 0.826006 | 3.44E-54 | -1.69E-46 |
| MS.gene054942 | MS.gene81745 | 0.832255 | 1.05E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene81745 | 0.813134 | 2.99E-51 | -1.69E-46 |
| MS.gene055712 | MS.gene81745 | 0.843123 | 1.70E-58 | -1.69E-46 |
| MS.gene056069 | MS.gene81745 | -0.812845 | 3.45E-51 | -1.69E-46 |
| MS.gene056875 | MS.gene81745 | 0.949088 | 2.58E-107 | -1.69E-46 |
| MS.gene057260 | MS.gene81745 | 0.858604 | 7.35E-63 | -1.69E-46 |
| MS.gene057439 | MS.gene81745 | 0.819316 | 1.24E-52 | -1.69E-46 |
| MS.gene057750 | MS.gene81745 | 0.809049 | 2.29E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene81745 | 0.803712 | 3.06E-49 | -1.69E-46 |
| MS.gene058182 | MS.gene81745 | 0.826048 | 3.36E-54 | -1.69E-46 |
| MS.gene058851 | MS.gene81745 | 0.810406 | 1.17E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene81745 | 0.800688 | 1.28E-48 | -1.69E-46 |
| MS.gene059899 | MS.gene81745 | 0.801206 | 1.00E-48 | -1.69E-46 |
| MS.gene060084 | MS.gene81745 | 0.801481 | 8.82E-49 | -1.69E-46 |
| MS.gene060476 | MS.gene81745 | 0.817089 | 3.95E-52 | -1.69E-46 |
| MS.gene060619 | MS.gene81745 | 0.818648 | 1.76E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene81745 | 0.802497 | 5.45E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene81745 | -0.802456 | 5.56E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81745.t1 | MTR_1g060010 | 98.005 | 401 | 8 | 0 | 1 | 401 | 84 | 484 | 0.0 | 791 |
| MS.gene81745.t1 | MTR_7g104500 | 85.112 | 403 | 52 | 4 | 1 | 400 | 96 | 493 | 0.0 | 620 |
| MS.gene81745.t1 | MTR_7g104500 | 86.740 | 362 | 43 | 2 | 1 | 359 | 96 | 455 | 0.0 | 566 |
| MS.gene81745.t1 | MTR_3g055590 | 59.177 | 316 | 127 | 1 | 32 | 347 | 48 | 361 | 1.96e-111 | 333 |
| MS.gene81745.t1 | MTR_5g094120 | 58.163 | 294 | 121 | 1 | 54 | 347 | 74 | 365 | 3.95e-111 | 332 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81745.t1 | AT3G52750 | 82.776 | 389 | 62 | 2 | 13 | 401 | 90 | 473 | 0.0 | 607 |
| MS.gene81745.t1 | AT3G52750 | 82.776 | 389 | 62 | 2 | 13 | 401 | 90 | 473 | 0.0 | 607 |
| MS.gene81745.t1 | AT3G52750 | 82.776 | 389 | 62 | 2 | 13 | 401 | 90 | 473 | 0.0 | 607 |
| MS.gene81745.t1 | AT2G36250 | 80.988 | 405 | 65 | 6 | 1 | 401 | 82 | 478 | 0.0 | 603 |
| MS.gene81745.t1 | AT2G36250 | 80.988 | 405 | 65 | 6 | 1 | 401 | 82 | 478 | 0.0 | 603 |
| MS.gene81745.t1 | AT2G36250 | 80.988 | 405 | 65 | 6 | 1 | 401 | 82 | 478 | 0.0 | 603 |
| MS.gene81745.t1 | AT2G36250 | 80.988 | 405 | 65 | 6 | 1 | 401 | 1 | 397 | 0.0 | 601 |
| MS.gene81745.t1 | AT3G52750 | 84.252 | 254 | 38 | 1 | 13 | 266 | 90 | 341 | 2.26e-136 | 394 |
| MS.gene81745.t1 | AT5G55280 | 56.395 | 344 | 146 | 2 | 6 | 347 | 38 | 379 | 1.38e-109 | 329 |
Find 106 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCGTCCTTCAAATGAAAA+AGG | 0.157995 | 1.3:+43499992 | None:intergenic |
| TCGATTGAAGAGGCGGTTTA+TGG | 0.213081 | 1.3:-43501510 | MS.gene81745:CDS |
| CAGTCTCCTTTACTGGATAT+TGG | 0.228609 | 1.3:-43499359 | MS.gene81745:CDS |
| TGCTATTCAGTCTCCTTTAC+TGG | 0.257008 | 1.3:-43499366 | MS.gene81745:CDS |
| AGATTGAATGCTTCCGTTAC+AGG | 0.277515 | 1.3:+43499863 | None:intergenic |
| CGATGCATGGAGTTGAGTTT+TGG | 0.278093 | 1.3:-43501677 | MS.gene81745:CDS |
| CAGGCGAAGATTAAAGTTAT+TGG | 0.286240 | 1.3:-43501747 | MS.gene81745:CDS |
| TGCTGATATTCGAGCTATAA+TGG | 0.295573 | 1.3:-43499660 | MS.gene81745:CDS |
| CCTGAGGTTTCGATGCTTAG+AGG | 0.298697 | 1.3:-43501873 | None:intergenic |
| CCTTTCTTCTTTAAGAAATC+AGG | 0.304694 | 1.3:+43497203 | None:intergenic |
| GAGAAAGGGTAGTTCTAGTT+TGG | 0.317072 | 1.3:-43501823 | MS.gene81745:CDS |
| GTAATAGATCCTTCACTTAC+TGG | 0.318596 | 1.3:-43498247 | MS.gene81745:CDS |
| GCTGGAATGGGTGGTGGAAC+CGG | 0.337874 | 1.3:-43500088 | MS.gene81745:CDS |
| GCAGTTAATAGCTTGTCATT+TGG | 0.353188 | 1.3:+43499902 | None:intergenic |
| GCAGCATTCATTCCCATCTC+AGG | 0.363659 | 1.3:+43501549 | None:intergenic |
| TTGGAACTTACGCGAGGTCT+TGG | 0.365517 | 1.3:-43501585 | MS.gene81745:CDS |
| AATTCCTTCTTGTGCTTGAA+TGG | 0.366217 | 1.3:+43499964 | None:intergenic |
| AGGATTTGTCCGAGAGCTTA+GGG | 0.379506 | 1.3:-43501797 | MS.gene81745:CDS |
| GAGGATTTGTCCGAGAGCTT+AGG | 0.397003 | 1.3:-43501798 | MS.gene81745:CDS |
| AGCATAACATTAATTGCAAC+CGG | 0.408343 | 1.3:-43497433 | MS.gene81745:CDS |
| CAATGCTGGTTCTTCACTGA+TGG | 0.410946 | 1.3:-43499636 | MS.gene81745:CDS |
| GAACCGTCTGCAGATTGGTT+TGG | 0.412737 | 1.3:-43501604 | MS.gene81745:CDS |
| GGCGGTTTATGGAGCTGATA+TGG | 0.416466 | 1.3:-43501499 | MS.gene81745:CDS |
| TGCTGATGATATTCTTCGAC+AGG | 0.422970 | 1.3:-43499840 | MS.gene81745:CDS |
| TTCCTCTTGACGCTTGAATC+CGG | 0.423864 | 1.3:+43497414 | None:intergenic |
| ATGGGTGGTGGAACCGGCAC+AGG | 0.425036 | 1.3:-43500082 | MS.gene81745:CDS |
| ACTTACTGAGTGCAGATCCC+TGG | 0.436250 | 1.3:-43499701 | MS.gene81745:intron |
| CCTGATTTCTTAAAGAAGAA+AGG | 0.436829 | 1.3:-43497203 | MS.gene81745:CDS |
| GAGTGATCTGACTTTGTTTG+AGG | 0.444135 | 1.3:-43499294 | MS.gene81745:intron |
| GTTATTGGTGTAGGAGGTGG+TGG | 0.444462 | 1.3:-43501732 | MS.gene81745:CDS |
| AGAAAGGGTAGTTCTAGTTT+GGG | 0.447853 | 1.3:-43501822 | MS.gene81745:CDS |
| CCAATCTGCAGACGGTTCTC+AGG | 0.448678 | 1.3:+43501609 | None:intergenic |
| AAACTAGAACTACCCTTTCT+CGG | 0.450362 | 1.3:+43501825 | None:intergenic |
| ATTCTTCGACAGGGCGTTCG+TGG | 0.450765 | 1.3:-43499830 | MS.gene81745:CDS |
| GGAATTGTGTGGAACATAAC+TGG | 0.451299 | 1.3:-43499320 | MS.gene81745:CDS |
| GGGTAGTTCTAGTTTGGGTG+AGG | 0.451348 | 1.3:-43501817 | MS.gene81745:CDS |
| GGTGGTGCTCCGATTATTGC+TGG | 0.461113 | 1.3:-43500061 | MS.gene81745:CDS |
| TTTGCAACACCAGCAATAAT+CGG | 0.461666 | 1.3:+43500052 | None:intergenic |
| AAGGACGCTCACGCTATCCT+AGG | 0.463769 | 1.3:-43497184 | MS.gene81745:CDS |
| CACGGTGAATGTTCCGAGAA+AGG | 0.465295 | 1.3:-43501838 | MS.gene81745:CDS |
| ATTGGTATAGAGAGGGCTAC+TGG | 0.466303 | 1.3:-43499341 | MS.gene81745:CDS |
| AAGATTAAAGTTATTGGTGT+AGG | 0.467049 | 1.3:-43501741 | MS.gene81745:CDS |
| CCTTCCTCGTTCTCTGATGA+TGG | 0.472648 | 1.3:-43497242 | MS.gene81745:CDS |
| CAATGGGTATACTGACTGTT+GGG | 0.476043 | 1.3:-43500027 | MS.gene81745:CDS |
| AATGCTGGTTCTTCACTGAT+GGG | 0.476321 | 1.3:-43499635 | MS.gene81745:CDS |
| AAAGTTATTGGTGTAGGAGG+TGG | 0.478162 | 1.3:-43501735 | MS.gene81745:CDS |
| CCTGAGAACCGTCTGCAGAT+TGG | 0.481006 | 1.3:-43501609 | MS.gene81745:CDS |
| ATTAAAGTTATTGGTGTAGG+AGG | 0.483640 | 1.3:-43501738 | MS.gene81745:CDS |
| AAATCAACATTTACCATCCC+AGG | 0.484005 | 1.3:+43499683 | None:intergenic |
| TGCTGGTGTTGCAAAGTCAA+TGG | 0.486003 | 1.3:-43500044 | MS.gene81745:CDS |
| GATTGAATGCTTCCGTTACA+GGG | 0.488232 | 1.3:+43499864 | None:intergenic |
| ATGGGGATAGGAACTGCAAC+TGG | 0.490129 | 1.3:-43499617 | MS.gene81745:intron |
| CTTACTGAGTGCAGATCCCT+GGG | 0.499177 | 1.3:-43499700 | MS.gene81745:intron |
| ACGGTGAATGTTCCGAGAAA+GGG | 0.505569 | 1.3:-43501837 | MS.gene81745:CDS |
| TTGCAGGCTGGAATGGGTGG+TGG | 0.508649 | 1.3:-43500094 | MS.gene81745:intron |
| TAGTGAGAGTAATTACAATC+AGG | 0.509905 | 1.3:-43501766 | MS.gene81745:CDS |
| AATCGGAGCACCACCTGTGC+CGG | 0.521073 | 1.3:+43500069 | None:intergenic |
| GGTGGTGGAACCGGCACAGG+TGG | 0.528595 | 1.3:-43500079 | MS.gene81745:CDS |
| TCTATACCAATATCCAGTAA+AGG | 0.530736 | 1.3:+43499353 | None:intergenic |
| TCAATGGGTATACTGACTGT+TGG | 0.536448 | 1.3:-43500028 | MS.gene81745:CDS |
| TGTGTGTTCAAGGGAAAACA+AGG | 0.539311 | 1.3:-43499409 | MS.gene81745:intron |
| CAGCATTCATTCCCATCTCA+GGG | 0.540119 | 1.3:+43501550 | None:intergenic |
| CGAGCTATAATGGCCAATGC+TGG | 0.546952 | 1.3:-43499650 | MS.gene81745:CDS |
| TACTGGATATTGGTATAGAG+AGG | 0.547814 | 1.3:-43499349 | MS.gene81745:CDS |
| CAGAGAGTCGATTGAAGAGG+CGG | 0.548139 | 1.3:-43501517 | MS.gene81745:CDS |
| GGTTCTTCACTGATGGGGAT+AGG | 0.549568 | 1.3:-43499629 | MS.gene81745:CDS |
| CATCAGTGAAGAACCAGCAT+TGG | 0.554126 | 1.3:+43499637 | None:intergenic |
| GATTTGAATTATACCTGTAG+TGG | 0.554427 | 1.3:+43497379 | None:intergenic |
| GCAGAAGAGTATTAAACCCT+AGG | 0.555930 | 1.3:+43497167 | None:intergenic |
| ACAGACTAGTCAGCTCACTC+AGG | 0.564624 | 1.3:-43497294 | MS.gene81745:intron |
| GCTGGTGTTGCAAAGTCAAT+GGG | 0.565632 | 1.3:-43500043 | MS.gene81745:CDS |
| TTCTCAATCTACCCCTGTAA+CGG | 0.573127 | 1.3:-43499876 | MS.gene81745:CDS |
| AGATATATCCCCTAAGCTCT+CGG | 0.575625 | 1.3:+43501788 | None:intergenic |
| AGATCCATTCAAGCACAAGA+AGG | 0.582161 | 1.3:-43499968 | MS.gene81745:CDS |
| CTTACGCGAGGTCTTGGAGC+TGG | 0.582616 | 1.3:-43501579 | MS.gene81745:CDS |
| ACATGAAGAGAAGCCACTAC+AGG | 0.584372 | 1.3:-43497392 | MS.gene81745:intron |
| ATGATAGAGAGTTCGATGCA+TGG | 0.590175 | 1.3:-43501690 | MS.gene81745:CDS |
| AGGACGCTCACGCTATCCTA+GGG | 0.592290 | 1.3:-43497183 | MS.gene81745:CDS |
| ACTGGATATTGGTATAGAGA+GGG | 0.593490 | 1.3:-43499348 | MS.gene81745:CDS |
| AGCTGGTGGTAACCCTGAGA+TGG | 0.605521 | 1.3:-43501562 | MS.gene81745:CDS |
| AAGCAGAGAGTCGATTGAAG+AGG | 0.606090 | 1.3:-43501520 | MS.gene81745:CDS |
| ACGCGAGGTCTTGGAGCTGG+TGG | 0.612340 | 1.3:-43501576 | MS.gene81745:CDS |
| TAGAGGTGAGGCGAGTAGCA+CGG | 0.614398 | 1.3:-43501856 | MS.gene81745:CDS |
| CTTACTTGACCAGTAAGTGA+AGG | 0.622903 | 1.3:+43498238 | None:intergenic |
| CTGAGTGCAGATCCCTGGGA+TGG | 0.627247 | 1.3:-43499696 | MS.gene81745:intron |
| ATGCTGGTTCTTCACTGATG+GGG | 0.629953 | 1.3:-43499634 | MS.gene81745:CDS |
| CCATCATCAGAGAACGAGGA+AGG | 0.634743 | 1.3:+43497242 | None:intergenic |
| GGTTTCGATGCTTAGAGGTG+AGG | 0.639570 | 1.3:-43501868 | None:intergenic |
| GCTGGTGGTAACCCTGAGAT+GGG | 0.642398 | 1.3:-43501561 | MS.gene81745:CDS |
| AACCGGATTCAAGCGTCAAG+AGG | 0.644965 | 1.3:-43497416 | MS.gene81745:CDS |
| AATCAACATTTACCATCCCA+GGG | 0.657201 | 1.3:+43499684 | None:intergenic |
| ATTGAATGCTTCCGTTACAG+GGG | 0.665540 | 1.3:+43499865 | None:intergenic |
| CAGACTAGTCAGCTCACTCA+GGG | 0.667175 | 1.3:-43497293 | MS.gene81745:CDS |
| GCTGATGATATTCTTCGACA+GGG | 0.667848 | 1.3:-43499839 | MS.gene81745:CDS |
| GTGTGTTCAAGGGAAAACAA+GGG | 0.669673 | 1.3:-43499408 | MS.gene81745:intron |
| AGAGGGCTACTGGAATTGTG+TGG | 0.670337 | 1.3:-43499331 | MS.gene81745:CDS |
| GGATTTGTCCGAGAGCTTAG+GGG | 0.679587 | 1.3:-43501796 | MS.gene81745:CDS |
| AGAAGTTATCTACGACCTCG+TGG | 0.681487 | 1.3:-43498299 | MS.gene81745:CDS |
| GTTCCAAACCAATCTGCAGA+CGG | 0.682388 | 1.3:+43501601 | None:intergenic |
| TTGTGTGGAACATAACTGGT+GGG | 0.692106 | 1.3:-43499316 | MS.gene81745:CDS |
| ACTACCATCATCAGAGAACG+AGG | 0.692979 | 1.3:+43497238 | None:intergenic |
| AGACGGTTCTCAGGAAACAC+AGG | 0.693113 | 1.3:+43501618 | None:intergenic |
| ATTGGTTTGGAACTTACGCG+AGG | 0.698954 | 1.3:-43501591 | MS.gene81745:CDS |
| AGGAGGTGGTGGATCTAACG+CGG | 0.701552 | 1.3:-43501721 | MS.gene81745:CDS |
| AATTAGCACTAGGGTCCACG+AGG | 0.745457 | 1.3:+43498284 | None:intergenic |
| ATTGTGTGGAACATAACTGG+TGG | 0.767709 | 1.3:-43499317 | MS.gene81745:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATTAATTATTCAATTAA+AGG | - | chr1.3:43500064-43500083 | MS.gene81745:CDS | 10.0% |
| !! | TACAAAATTATAAAAGAAAA+TGG | - | chr1.3:43498649-43498668 | MS.gene81745:intron | 10.0% |
| !! | TACTCTAATAAATATTAAAA+TGG | - | chr1.3:43500157-43500176 | MS.gene81745:intron | 10.0% |
| !!! | ATTGAATTATATTTTACATT+AGG | - | chr1.3:43497613-43497632 | MS.gene81745:intron | 10.0% |
| !! | AAATATTAGTATATGTGTTA+GGG | - | chr1.3:43497688-43497707 | MS.gene81745:intron | 15.0% |
| !! | AATCATTTATGAATTTCTTA+TGG | + | chr1.3:43501036-43501055 | None:intergenic | 15.0% |
| !! | AATTCATAAATGATTTGAAA+TGG | - | chr1.3:43501041-43501060 | MS.gene81745:intron | 15.0% |
| !! | ACTAATTGCAATATAAAATA+TGG | + | chr1.3:43500471-43500490 | None:intergenic | 15.0% |
| !! | ATTAATTATTCAATTAAAGG+AGG | - | chr1.3:43500067-43500086 | MS.gene81745:CDS | 15.0% |
| !! | CAATCAAGATTAAATAAAAT+AGG | - | chr1.3:43500133-43500152 | MS.gene81745:intron | 15.0% |
| !! | TCATTTGATGAATATATAAT+CGG | - | chr1.3:43501350-43501369 | MS.gene81745:intron | 15.0% |
| !!! | AACACAAGATAATATTTTTT+TGG | + | chr1.3:43498780-43498799 | None:intergenic | 15.0% |
| !!! | TCATTTTAATTTTCAAGTTT+AGG | + | chr1.3:43498921-43498940 | None:intergenic | 15.0% |
| !!! | TCCAAATTTTGAAAAATTTA+GGG | + | chr1.3:43498850-43498869 | None:intergenic | 15.0% |
| !!! | TTCAGTTTTCATTTTTTAAA+GGG | - | chr1.3:43498281-43498300 | MS.gene81745:CDS | 15.0% |
| !!! | TTCCAAATTTTGAAAAATTT+AGG | + | chr1.3:43498851-43498870 | None:intergenic | 15.0% |
| !!! | TTTCAGTTTTCATTTTTTAA+AGG | - | chr1.3:43498280-43498299 | MS.gene81745:CDS | 15.0% |
| !!! | TTTTGAACTTCATATATTAT+TGG | - | chr1.3:43499586-43499605 | MS.gene81745:intron | 15.0% |
| !! | AAAAAAAAAAAGAACAGCAT+GGG | + | chr1.3:43499821-43499840 | None:intergenic | 20.0% |
| !! | AAAAACTATTGCATACAAAA+GGG | + | chr1.3:43500689-43500708 | None:intergenic | 20.0% |
| !! | AATACAAATTTGGTTATTTG+TGG | - | chr1.3:43498132-43498151 | MS.gene81745:intron | 20.0% |
| !! | AATTATAAAAGAAAATGGTG+AGG | - | chr1.3:43498654-43498673 | MS.gene81745:intron | 20.0% |
| !! | AGAAACATTTAAAGAAATCA+AGG | + | chr1.3:43500103-43500122 | None:intergenic | 20.0% |
| !! | AGATTCAAATTTAATAGACA+AGG | + | chr1.3:43499942-43499961 | None:intergenic | 20.0% |
| !! | ATAAAATAAGTCAATGTTTG+AGG | + | chr1.3:43497722-43497741 | None:intergenic | 20.0% |
| !! | CAAAAATTAAATTAGCACTA+GGG | + | chr1.3:43500767-43500786 | None:intergenic | 20.0% |
| !! | CAAATATTAGTATATGTGTT+AGG | - | chr1.3:43497687-43497706 | MS.gene81745:intron | 20.0% |
| !! | CTATATTAAATCAAATGACA+TGG | + | chr1.3:43501583-43501602 | None:intergenic | 20.0% |
| !! | GATTCAAATTTAATAGACAA+GGG | + | chr1.3:43499941-43499960 | None:intergenic | 20.0% |
| !! | GTAAAAAAGATTTACATTGT+CGG | - | chr1.3:43501513-43501532 | MS.gene81745:CDS | 20.0% |
| !! | TAAAAACTATTGCATACAAA+AGG | + | chr1.3:43500690-43500709 | None:intergenic | 20.0% |
| !! | TAAAATAAGTCAATGTTTGA+GGG | + | chr1.3:43497721-43497740 | None:intergenic | 20.0% |
| !! | TAAATTGCACAATTCATAAA+CGG | + | chr1.3:43500927-43500946 | None:intergenic | 20.0% |
| !! | TAATAAATATTAAAATGGCC+TGG | - | chr1.3:43500162-43500181 | MS.gene81745:intron | 20.0% |
| !! | TAATATTGAAGTGCAATTTA+AGG | - | chr1.3:43499518-43499537 | MS.gene81745:intron | 20.0% |
| !! | TATCTTGTGTTTATTAGTAA+GGG | - | chr1.3:43498789-43498808 | MS.gene81745:intron | 20.0% |
| !! | TATTTGTAAATCATGTACAA+CGG | + | chr1.3:43497673-43497692 | None:intergenic | 20.0% |
| !! | TCTGATATCAAATACAAATT+TGG | - | chr1.3:43498122-43498141 | MS.gene81745:intron | 20.0% |
| !! | TTATCTTGTGTTTATTAGTA+AGG | - | chr1.3:43498788-43498807 | MS.gene81745:intron | 20.0% |
| !!! | AAATTAAAATGAACTTTTGC+AGG | - | chr1.3:43498929-43498948 | MS.gene81745:intron | 20.0% |
| !!! | AAGTATTTATTTTTTCCGTT+TGG | + | chr1.3:43501248-43501267 | None:intergenic | 20.0% |
| !!! | AATATTTTCTGAAAGAAAAC+AGG | + | chr1.3:43498261-43498280 | None:intergenic | 20.0% |
| !!! | ACAAGATAATATTTTTTTGG+TGG | + | chr1.3:43498777-43498796 | None:intergenic | 20.0% |
| !!! | ACCCTAAATTTTTCAAAATT+TGG | - | chr1.3:43498846-43498865 | MS.gene81745:intron | 20.0% |
| !!! | ATATTTTCTGAAAGAAAACA+GGG | + | chr1.3:43498260-43498279 | None:intergenic | 20.0% |
| !!! | ATTTTCAGAAACTTTCAAAA+TGG | + | chr1.3:43498616-43498635 | None:intergenic | 20.0% |
| !!! | CATGTCATTTGATTTAATAT+AGG | - | chr1.3:43501581-43501600 | MS.gene81745:CDS | 20.0% |
| !!! | GGTAAGATTTTATTAAAAAG+TGG | + | chr1.3:43498408-43498427 | None:intergenic | 20.0% |
| !!! | TGTTTCAAATTTTAAAGGAA+CGG | + | chr1.3:43499880-43499899 | None:intergenic | 20.0% |
| !!! | TTTTTAATAGAATCGTTTAC+AGG | - | chr1.3:43500704-43500723 | MS.gene81745:intron | 20.0% |
| ! | AAATAAAAGCAGTGTAGAAT+TGG | + | chr1.3:43499488-43499507 | None:intergenic | 25.0% |
| ! | AAGATTAAAGTTATTGGTGT+AGG | - | chr1.3:43497298-43497317 | MS.gene81745:intron | 25.0% |
| ! | ACATGAATACAAGAAGTAAA+CGG | - | chr1.3:43498823-43498842 | MS.gene81745:intron | 25.0% |
| ! | ATCAGAATTATGAGTATGAA+TGG | + | chr1.3:43501712-43501731 | None:intergenic | 25.0% |
| ! | CAAAAGTAGAAAAATTGTCT+TGG | - | chr1.3:43498344-43498363 | MS.gene81745:intron | 25.0% |
| ! | CCAAAAATTAAATTAGCACT+AGG | + | chr1.3:43500768-43500787 | None:intergenic | 25.0% |
| ! | CTAAAAAACAACAAAGAGAT+GGG | + | chr1.3:43499844-43499863 | None:intergenic | 25.0% |
| ! | GAAAAAAAAAAAGAACAGCA+TGG | + | chr1.3:43499822-43499841 | None:intergenic | 25.0% |
| ! | GAAATCAGTATGTACTATTT+AGG | - | chr1.3:43500307-43500326 | MS.gene81745:intron | 25.0% |
| ! | GTGAATGAATTAAATCCATA+TGG | - | chr1.3:43501537-43501556 | MS.gene81745:CDS | 25.0% |
| ! | TAGTACAAAAGATCAAATAG+CGG | - | chr1.3:43497837-43497856 | MS.gene81745:intron | 25.0% |
| ! | TGCTAAACACTATTATAACT+AGG | + | chr1.3:43500997-43501016 | None:intergenic | 25.0% |
| ! | TTCACAGAAAAGTAAAACTA+TGG | + | chr1.3:43500568-43500587 | None:intergenic | 25.0% |
| !! | ATTAGTTTCCTTTAAAGACA+AGG | - | chr1.3:43498193-43498212 | MS.gene81745:intron | 25.0% |
| !! | CAAGACAATTTTTCTACTTT+TGG | + | chr1.3:43498346-43498365 | None:intergenic | 25.0% |
| !! | CAATTAGTATGAATTTTCTG+TGG | - | chr1.3:43500483-43500502 | MS.gene81745:intron | 25.0% |
| !! | CACGATGTTTCAAATTTTAA+AGG | + | chr1.3:43499885-43499904 | None:intergenic | 25.0% |
| !! | CTTTTCTCTGAATATTACTT+GGG | + | chr1.3:43501223-43501242 | None:intergenic | 25.0% |
| !! | GGAGTTTTCTTAGTATTTAT+CGG | - | chr1.3:43497634-43497653 | MS.gene81745:intron | 25.0% |
| !! | TTAGTTTCCTTTAAAGACAA+GGG | - | chr1.3:43498194-43498213 | MS.gene81745:intron | 25.0% |
| !!! | ATTTTGTTTAGCTGGTATTT+GGG | - | chr1.3:43501308-43501327 | MS.gene81745:intron | 25.0% |
| !!! | CCTAGTGCTAATTTAATTTT+TGG | - | chr1.3:43500765-43500784 | MS.gene81745:intron | 25.0% |
| !!! | CTTTAAAATTTGAAACATCG+TGG | - | chr1.3:43499883-43499902 | MS.gene81745:CDS | 25.0% |
| !!! | TATTTTGTTTAGCTGGTATT+TGG | - | chr1.3:43501307-43501326 | MS.gene81745:intron | 25.0% |
| AAAGATAATGCATGAACAAC+AGG | + | chr1.3:43499282-43499301 | None:intergenic | 30.0% | |
| AATTATGAGTATGAATGGCA+TGG | + | chr1.3:43501707-43501726 | None:intergenic | 30.0% | |
| ACAAGTGTATAAAGATCAGT+AGG | - | chr1.3:43501069-43501088 | MS.gene81745:intron | 30.0% | |
| AGCATAACATTAATTGCAAC+CGG | - | chr1.3:43501606-43501625 | MS.gene81745:CDS | 30.0% | |
| AGCTACTATATGACATCATT+GGG | + | chr1.3:43497792-43497811 | None:intergenic | 30.0% | |
| AGTTATCAGTAGTTCAATCA+AGG | + | chr1.3:43497937-43497956 | None:intergenic | 30.0% | |
| ATTAAAGTTATTGGTGTAGG+AGG | - | chr1.3:43497301-43497320 | MS.gene81745:intron | 30.0% | |
| ATTGGTTAAGCAGTTAAAAC+GGG | + | chr1.3:43498429-43498448 | None:intergenic | 30.0% | |
| CAAAATATGAAAAGGAAACC+TGG | + | chr1.3:43500000-43500019 | None:intergenic | 30.0% | |
| CAATTGTGATAGAGAAAAGA+TGG | - | chr1.3:43498539-43498558 | MS.gene81745:intron | 30.0% | |
| CATATGGAATATGATCAACA+TGG | - | chr1.3:43501553-43501572 | MS.gene81745:CDS | 30.0% | |
| CATGTTGATCATATTCCATA+TGG | + | chr1.3:43501555-43501574 | None:intergenic | 30.0% | |
| CCAAGTAATATTCAGAGAAA+AGG | - | chr1.3:43501221-43501240 | MS.gene81745:intron | 30.0% | |
| CCAGCTAAACAAAATATAAC+CGG | + | chr1.3:43501303-43501322 | None:intergenic | 30.0% | |
| CCTGATTTCTTAAAGAAGAA+AGG | - | chr1.3:43501836-43501855 | MS.gene81745:CDS | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | chr1.3:43498736-43498755 | MS.gene81745:intron | 30.0% | |
| GATTTGAATTATACCTGTAG+TGG | + | chr1.3:43501663-43501682 | None:intergenic | 30.0% | |
| GCTAAAAAACAACAAAGAGA+TGG | + | chr1.3:43499845-43499864 | None:intergenic | 30.0% | |
| TAAATATTAAAATGGCCTGG+TGG | - | chr1.3:43500165-43500184 | MS.gene81745:intron | 30.0% | |
| TAGAGAAAAGATGGAATGAA+AGG | - | chr1.3:43498548-43498567 | MS.gene81745:intron | 30.0% | |
| TAGCTACTATATGACATCAT+TGG | + | chr1.3:43497793-43497812 | None:intergenic | 30.0% | |
| TAGTGAGAGTAATTACAATC+AGG | - | chr1.3:43497273-43497292 | MS.gene81745:CDS | 30.0% | |
| TATGGAAGACATTATTCCAA+TGG | + | chr1.3:43500453-43500472 | None:intergenic | 30.0% | |
| TCAAATTTAATAGACAAGGG+TGG | + | chr1.3:43499938-43499957 | None:intergenic | 30.0% | |
| TCTATACCAATATCCAGTAA+AGG | + | chr1.3:43499689-43499708 | None:intergenic | 30.0% | |
| TCTGTCTATTAAACTCATCA+TGG | - | chr1.3:43500653-43500672 | MS.gene81745:intron | 30.0% | |
| TCTTATAGTCATGTATCCAT+TGG | - | chr1.3:43500434-43500453 | MS.gene81745:intron | 30.0% | |
| TTCGTCCTTCAAATGAAAAA+GGG | + | chr1.3:43499049-43499068 | None:intergenic | 30.0% | |
| TTTCGTCCTTCAAATGAAAA+AGG | + | chr1.3:43499050-43499069 | None:intergenic | 30.0% | |
| ! | AATGTCCTTTTATCACTCTA+TGG | - | chr1.3:43501188-43501207 | MS.gene81745:intron | 30.0% |
| ! | CAGGTTTCCTTTTCATATTT+TGG | - | chr1.3:43499998-43500017 | MS.gene81745:CDS | 30.0% |
| ! | CATTGGTTAAGCAGTTAAAA+CGG | + | chr1.3:43498430-43498449 | None:intergenic | 30.0% |
| ! | CCTTTCTTCTTTAAGAAATC+AGG | + | chr1.3:43501839-43501858 | None:intergenic | 30.0% |
| ! | CCTTTTCTCTGAATATTACT+TGG | + | chr1.3:43501224-43501243 | None:intergenic | 30.0% |
| ! | TGAATATTACTTGGGTTTTG+TGG | + | chr1.3:43501215-43501234 | None:intergenic | 30.0% |
| !! | TCAAATTTTAAAGGAACGGA+GGG | + | chr1.3:43499876-43499895 | None:intergenic | 30.0% |
| !! | TTCAAATTTTAAAGGAACGG+AGG | + | chr1.3:43499877-43499896 | None:intergenic | 30.0% |
| !! | TTTTGTTTAGCTGGTATTTG+GGG | - | chr1.3:43501309-43501328 | MS.gene81745:intron | 30.0% |
| !!! | AATATTTTTTTGGTGGTGTC+CGG | + | chr1.3:43498770-43498789 | None:intergenic | 30.0% |
| !!! | GACATTTTTTGTGTGTTCAA+GGG | - | chr1.3:43499621-43499640 | MS.gene81745:CDS | 30.0% |
| !!! | TGACATTTTTTGTGTGTTCA+AGG | - | chr1.3:43499620-43499639 | MS.gene81745:CDS | 30.0% |
| AAACTAGAACTACCCTTTCT+CGG | + | chr1.3:43497217-43497236 | None:intergenic | 35.0% | |
| AAATCAACATTTACCATCCC+AGG | + | chr1.3:43499359-43499378 | None:intergenic | 35.0% | |
| AATCAACATTTACCATCCCA+GGG | + | chr1.3:43499358-43499377 | None:intergenic | 35.0% | |
| AATTCCTTCTTGTGCTTGAA+TGG | + | chr1.3:43499078-43499097 | None:intergenic | 35.0% | |
| ACTGGATATTGGTATAGAGA+GGG | - | chr1.3:43499691-43499710 | MS.gene81745:intron | 35.0% | |
| ATAAAGATCAGTAGGTAGCT+CGG | - | chr1.3:43501077-43501096 | MS.gene81745:intron | 35.0% | |
| ATTCAGAGAAAAGGACCAAA+CGG | - | chr1.3:43501230-43501249 | MS.gene81745:intron | 35.0% | |
| ATTGCACAATTCATAAACGG+TGG | + | chr1.3:43500924-43500943 | None:intergenic | 35.0% | |
| CAATACCTCGTTATACAGTA+GGG | - | chr1.3:43497995-43498014 | MS.gene81745:intron | 35.0% | |
| CAGGCGAAGATTAAAGTTAT+TGG | - | chr1.3:43497292-43497311 | MS.gene81745:CDS | 35.0% | |
| CCAATTATCTTCTTCTCCTA+GGG | + | chr1.3:43500966-43500985 | None:intergenic | 35.0% | |
| CCACATGCCAAAATATGAAA+AGG | + | chr1.3:43500008-43500027 | None:intergenic | 35.0% | |
| GTAATAGATCCTTCACTTAC+TGG | - | chr1.3:43500792-43500811 | MS.gene81745:intron | 35.0% | |
| TAATAGACAAGGGTGGATAT+AGG | + | chr1.3:43499931-43499950 | None:intergenic | 35.0% | |
| TACTGGATATTGGTATAGAG+AGG | - | chr1.3:43499690-43499709 | MS.gene81745:intron | 35.0% | |
| TCGTCCTTCAAATGAAAAAG+GGG | + | chr1.3:43499048-43499067 | None:intergenic | 35.0% | |
| TGCTGATATTCGAGCTATAA+TGG | - | chr1.3:43499379-43499398 | MS.gene81745:CDS | 35.0% | |
| TGTGCAATTTACAGCATTTC+CGG | - | chr1.3:43500936-43500955 | MS.gene81745:intron | 35.0% | |
| TGTTGATCCCTTGTCTTTAA+AGG | + | chr1.3:43498204-43498223 | None:intergenic | 35.0% | |
| TTCAAATGTTGCTGTGAAGT+AGG | + | chr1.3:43497885-43497904 | None:intergenic | 35.0% | |
| TTGCACAATTCATAAACGGT+GGG | + | chr1.3:43500923-43500942 | None:intergenic | 35.0% | |
| TTGGAGCTAATACTTGTTTG+AGG | - | chr1.3:43500612-43500631 | MS.gene81745:intron | 35.0% | |
| TTTGCAACACCAGCAATAAT+CGG | + | chr1.3:43498990-43499009 | None:intergenic | 35.0% | |
| ! | AATTTGAAACATCGTGGTAC+TGG | - | chr1.3:43499889-43499908 | MS.gene81745:CDS | 35.0% |
| ! | ATTTGAAACATCGTGGTACT+GGG | - | chr1.3:43499890-43499909 | MS.gene81745:CDS | 35.0% |
| ! | GCAGTTAATAGCTTGTCATT+TGG | + | chr1.3:43499140-43499159 | None:intergenic | 35.0% |
| ! | TAAAATGAACTTTTGCAGGC+TGG | - | chr1.3:43498933-43498952 | MS.gene81745:intron | 35.0% |
| ! | TTGCAAACTTCGACTTTTGT+TGG | - | chr1.3:43500593-43500612 | MS.gene81745:intron | 35.0% |
| !! | AGAAAGGGTAGTTCTAGTTT+GGG | - | chr1.3:43497217-43497236 | MS.gene81745:CDS | 35.0% |
| !! | CCGGTTATATTTTGTTTAGC+TGG | - | chr1.3:43501300-43501319 | MS.gene81745:intron | 35.0% |
| !!! | ATATTTTTTTGGTGGTGTCC+GGG | + | chr1.3:43498769-43498788 | None:intergenic | 35.0% |
| !!! | CCTTTTCATATTTTGGCATG+TGG | - | chr1.3:43500005-43500024 | MS.gene81745:CDS | 35.0% |
| AAAGTTATTGGTGTAGGAGG+TGG | - | chr1.3:43497304-43497323 | MS.gene81745:intron | 40.0% | |
| AGATATATCCCCTAAGCTCT+CGG | + | chr1.3:43497254-43497273 | None:intergenic | 40.0% | |
| AGATCCATTCAAGCACAAGA+AGG | - | chr1.3:43499071-43499090 | MS.gene81745:intron | 40.0% | |
| AGATTGAATGCTTCCGTTAC+AGG | + | chr1.3:43499179-43499198 | None:intergenic | 40.0% | |
| AGTAGATGAAAGACTCGTGT+AGG | - | chr1.3:43498513-43498532 | MS.gene81745:intron | 40.0% | |
| ATGAGTATGAATGGCATGGA+TGG | + | chr1.3:43501703-43501722 | None:intergenic | 40.0% | |
| ATGATAGAGAGTTCGATGCA+TGG | - | chr1.3:43497349-43497368 | MS.gene81745:intron | 40.0% | |
| ATTCATAAACGGTGGGATAG+TGG | + | chr1.3:43500916-43500935 | None:intergenic | 40.0% | |
| ATTGAATGCTTCCGTTACAG+GGG | + | chr1.3:43499177-43499196 | None:intergenic | 40.0% | |
| ATTGTCCCTACTGTATAACG+AGG | + | chr1.3:43498003-43498022 | None:intergenic | 40.0% | |
| ATTGTGTGGAACATAACTGG+TGG | - | chr1.3:43499722-43499741 | MS.gene81745:intron | 40.0% | |
| CAGTCTCCTTTACTGGATAT+TGG | - | chr1.3:43499680-43499699 | MS.gene81745:CDS | 40.0% | |
| CATCGAAATGATTCGATCTC+TGG | - | chr1.3:43501116-43501135 | MS.gene81745:intron | 40.0% | |
| CCCTAGGAGAAGAAGATAAT+TGG | - | chr1.3:43500963-43500982 | MS.gene81745:intron | 40.0% | |
| CGAGTGCTTTATGCTATGTT+AGG | - | chr1.3:43497972-43497991 | MS.gene81745:intron | 40.0% | |
| CTTACTTGACCAGTAAGTGA+AGG | + | chr1.3:43500804-43500823 | None:intergenic | 40.0% | |
| GATTGAATGCTTCCGTTACA+GGG | + | chr1.3:43499178-43499197 | None:intergenic | 40.0% | |
| GCAATACCTCGTTATACAGT+AGG | - | chr1.3:43497994-43498013 | MS.gene81745:intron | 40.0% | |
| GCACAGCTGAAACATATACT+TGG | + | chr1.3:43499799-43499818 | None:intergenic | 40.0% | |
| GCCAATTATCTTCTTCTCCT+AGG | + | chr1.3:43500967-43500986 | None:intergenic | 40.0% | |
| GCTGATGATATTCTTCGACA+GGG | - | chr1.3:43499200-43499219 | MS.gene81745:intron | 40.0% | |
| GGAATTGTGTGGAACATAAC+TGG | - | chr1.3:43499719-43499738 | MS.gene81745:intron | 40.0% | |
| GTAGATGAAAGACTCGTGTA+GGG | - | chr1.3:43498514-43498533 | MS.gene81745:intron | 40.0% | |
| GTGCAATTTACAGCATTTCC+GGG | - | chr1.3:43500937-43500956 | MS.gene81745:intron | 40.0% | |
| GTGGTCCATAGAGTGATAAA+AGG | + | chr1.3:43501196-43501215 | None:intergenic | 40.0% | |
| GTGTGTTCAAGGGAAAACAA+GGG | - | chr1.3:43499631-43499650 | MS.gene81745:CDS | 40.0% | |
| TATACTCTTCTCATGAAGCC+AGG | - | chr1.3:43499979-43499998 | MS.gene81745:CDS | 40.0% | |
| TATATGCAAGGTTCAAACCC+CGG | - | chr1.3:43498748-43498767 | MS.gene81745:intron | 40.0% | |
| TGCTATTCAGTCTCCTTTAC+TGG | - | chr1.3:43499673-43499692 | MS.gene81745:CDS | 40.0% | |
| TGCTGATGATATTCTTCGAC+AGG | - | chr1.3:43499199-43499218 | MS.gene81745:intron | 40.0% | |
| TGTGTGTTCAAGGGAAAACA+AGG | - | chr1.3:43499630-43499649 | MS.gene81745:CDS | 40.0% | |
| TTCTCAATCTACCCCTGTAA+CGG | - | chr1.3:43499163-43499182 | MS.gene81745:intron | 40.0% | |
| TTGTGTGGAACATAACTGGT+GGG | - | chr1.3:43499723-43499742 | MS.gene81745:intron | 40.0% | |
| ! | AGGCTCTTTTCTGCAATTGT+TGG | - | chr1.3:43499538-43499557 | MS.gene81745:intron | 40.0% |
| ! | ATCTGACTTTGTTTGAGGTG+AGG | - | chr1.3:43499750-43499769 | MS.gene81745:intron | 40.0% |
| ! | CAATGGGTATACTGACTGTT+GGG | - | chr1.3:43499012-43499031 | MS.gene81745:intron | 40.0% |
| ! | GAGTGATCTGACTTTGTTTG+AGG | - | chr1.3:43499745-43499764 | MS.gene81745:intron | 40.0% |
| ! | GGTGTTTCTTTTAGTAGTGC+AGG | - | chr1.3:43498153-43498172 | MS.gene81745:intron | 40.0% |
| ! | GTTTCTTTTAGTAGTGCAGG+AGG | - | chr1.3:43498156-43498175 | MS.gene81745:intron | 40.0% |
| ! | TCAATGGGTATACTGACTGT+TGG | - | chr1.3:43499011-43499030 | MS.gene81745:intron | 40.0% |
| ! | TCTGACTTTGTTTGAGGTGA+GGG | - | chr1.3:43499751-43499770 | MS.gene81745:intron | 40.0% |
| !! | AATGCTGGTTCTTCACTGAT+GGG | - | chr1.3:43499404-43499423 | MS.gene81745:intron | 40.0% |
| !! | ACGACCCCTTTTTCATTTGA+AGG | - | chr1.3:43499041-43499060 | MS.gene81745:intron | 40.0% |
| !! | GAGAAAGGGTAGTTCTAGTT+TGG | - | chr1.3:43497216-43497235 | MS.gene81745:CDS | 40.0% |
| !!! | TATTTTTTTGGTGGTGTCCG+GGG | + | chr1.3:43498768-43498787 | None:intergenic | 40.0% |
| AAGCAGAGAGTCGATTGAAG+AGG | - | chr1.3:43497519-43497538 | MS.gene81745:intron | 45.0% | |
| AAGTAGGACTACAGGGCTAT+AGG | + | chr1.3:43497869-43497888 | None:intergenic | 45.0% | |
| ACATGAAGAGAAGCCACTAC+AGG | - | chr1.3:43501647-43501666 | MS.gene81745:CDS | 45.0% | |
| ACGGTGAATGTTCCGAGAAA+GGG | - | chr1.3:43497202-43497221 | MS.gene81745:CDS | 45.0% | |
| ACTACCATCATCAGAGAACG+AGG | + | chr1.3:43501804-43501823 | None:intergenic | 45.0% | |
| AGAAGTTATCTACGACCTCG+TGG | - | chr1.3:43500740-43500759 | MS.gene81745:intron | 45.0% | |
| AGGATTTGTCCGAGAGCTTA+GGG | - | chr1.3:43497242-43497261 | MS.gene81745:CDS | 45.0% | |
| ATGAATGGCATGGATGGAGA+GGG | + | chr1.3:43501697-43501716 | None:intergenic | 45.0% | |
| ATTGGTATAGAGAGGGCTAC+TGG | - | chr1.3:43499698-43499717 | MS.gene81745:intron | 45.0% | |
| CAGCATTCATTCCCATCTCA+GGG | + | chr1.3:43497492-43497511 | None:intergenic | 45.0% | |
| CATCAGTGAAGAACCAGCAT+TGG | + | chr1.3:43499405-43499424 | None:intergenic | 45.0% | |
| CTAAACTAGCCCACCCAAAT+TGG | + | chr1.3:43500250-43500269 | None:intergenic | 45.0% | |
| GTTCCAAACCAATCTGCAGA+CGG | + | chr1.3:43497441-43497460 | None:intergenic | 45.0% | |
| TATGAATGGCATGGATGGAG+AGG | + | chr1.3:43501698-43501717 | None:intergenic | 45.0% | |
| TCGATTGAAGAGGCGGTTTA+TGG | - | chr1.3:43497529-43497548 | MS.gene81745:intron | 45.0% | |
| TCTTGTACTGTGAGCTTCTC+CGG | - | chr1.3:43501281-43501300 | MS.gene81745:intron | 45.0% | |
| TGCTGTGAAGTAGGACTACA+GGG | + | chr1.3:43497876-43497895 | None:intergenic | 45.0% | |
| TTCCTCTTGACGCTTGAATC+CGG | + | chr1.3:43501628-43501647 | None:intergenic | 45.0% | |
| TTGCTGTGAAGTAGGACTAC+AGG | + | chr1.3:43497877-43497896 | None:intergenic | 45.0% | |
| ! | ATTTGGAACAGACGTGCTTG+CGG | - | chr1.3:43498863-43498882 | MS.gene81745:intron | 45.0% |
| ! | CGATGCATGGAGTTGAGTTT+TGG | - | chr1.3:43497362-43497381 | MS.gene81745:intron | 45.0% |
| ! | GAACTTTTGCAGGCTGGAAT+GGG | - | chr1.3:43498939-43498958 | MS.gene81745:intron | 45.0% |
| ! | TCAAAGAGCTCTAGTGAGAG+AGG | + | chr1.3:43497756-43497775 | None:intergenic | 45.0% |
| ! | TGAACTTTTGCAGGCTGGAA+TGG | - | chr1.3:43498938-43498957 | MS.gene81745:intron | 45.0% |
| ! | TTAAAATGGCCTGGTGGTGT+TGG | - | chr1.3:43500171-43500190 | MS.gene81745:intron | 45.0% |
| !! | ATGCTGGTTCTTCACTGATG+GGG | - | chr1.3:43499405-43499424 | MS.gene81745:intron | 45.0% |
| !! | ATTGGTTTGGAACTTACGCG+AGG | - | chr1.3:43497448-43497467 | MS.gene81745:intron | 45.0% |
| !! | CAATGCTGGTTCTTCACTGA+TGG | - | chr1.3:43499403-43499422 | MS.gene81745:intron | 45.0% |
| !! | GCTGGTGTTGCAAAGTCAAT+GGG | - | chr1.3:43498996-43499015 | MS.gene81745:intron | 45.0% |
| !! | TGCTGGTGTTGCAAAGTCAA+TGG | - | chr1.3:43498995-43499014 | MS.gene81745:intron | 45.0% |
| !!! | ATTAACATATATTTTAAAAA+AGG | + | chr1.3:43498478-43498497 | None:intergenic | 5.0% |
| !!! | TAATTTAAAAATCATATTTT+TGG | + | chr1.3:43500350-43500369 | None:intergenic | 5.0% |
| AACCGGATTCAAGCGTCAAG+AGG | - | chr1.3:43501623-43501642 | MS.gene81745:CDS | 50.0% | |
| AAGGCTGTCAGTGTTGTCGA+CGG | + | chr1.3:43497918-43497937 | None:intergenic | 50.0% | |
| AATTAGCACTAGGGTCCACG+AGG | + | chr1.3:43500758-43500777 | None:intergenic | 50.0% | |
| ACTTACTGAGTGCAGATCCC+TGG | - | chr1.3:43499338-43499357 | MS.gene81745:CDS | 50.0% | |
| AGAACGTTAACCAGTGCCCT+CGG | + | chr1.3:43498455-43498474 | None:intergenic | 50.0% | |
| AGACGGTTCTCAGGAAACAC+AGG | + | chr1.3:43497424-43497443 | None:intergenic | 50.0% | |
| AGAGGGCTACTGGAATTGTG+TGG | - | chr1.3:43499708-43499727 | MS.gene81745:intron | 50.0% | |
| AGCTCTTTGAGCTAGAAGCG+CGG | - | chr1.3:43497766-43497785 | MS.gene81745:intron | 50.0% | |
| ATGGATGGAGAGGGAATGAG+AGG | + | chr1.3:43501688-43501707 | None:intergenic | 50.0% | |
| ATGGGGATAGGAACTGCAAC+TGG | - | chr1.3:43499422-43499441 | MS.gene81745:intron | 50.0% | |
| CACGGTGAATGTTCCGAGAA+AGG | - | chr1.3:43497201-43497220 | MS.gene81745:CDS | 50.0% | |
| CAGAGAGTCGATTGAAGAGG+CGG | - | chr1.3:43497522-43497541 | MS.gene81745:intron | 50.0% | |
| CCATCATCAGAGAACGAGGA+AGG | + | chr1.3:43501800-43501819 | None:intergenic | 50.0% | |
| CCTTCCTCGTTCTCTGATGA+TGG | - | chr1.3:43501797-43501816 | MS.gene81745:CDS | 50.0% | |
| CGAGCTATAATGGCCAATGC+TGG | - | chr1.3:43499389-43499408 | MS.gene81745:CDS | 50.0% | |
| CTTACTGAGTGCAGATCCCT+GGG | - | chr1.3:43499339-43499358 | MS.gene81745:CDS | 50.0% | |
| CTTCTTCTCCTAGGGATACC+CGG | + | chr1.3:43500958-43500977 | None:intergenic | 50.0% | |
| GAGGATTTGTCCGAGAGCTT+AGG | - | chr1.3:43497241-43497260 | MS.gene81745:CDS | 50.0% | |
| GCAGCATTCATTCCCATCTC+AGG | + | chr1.3:43497493-43497512 | None:intergenic | 50.0% | |
| GGATTTGTCCGAGAGCTTAG+GGG | - | chr1.3:43497243-43497262 | MS.gene81745:CDS | 50.0% | |
| GGCGGTTTATGGAGCTGATA+TGG | - | chr1.3:43497540-43497559 | MS.gene81745:intron | 50.0% | |
| GGTTCTTCACTGATGGGGAT+AGG | - | chr1.3:43499410-43499429 | MS.gene81745:intron | 50.0% | |
| GTTATTGGTGTAGGAGGTGG+TGG | - | chr1.3:43497307-43497326 | MS.gene81745:intron | 50.0% | |
| TGAGCTTAGCTCAGTCGGTA+GGG | - | chr1.3:43498714-43498733 | MS.gene81745:intron | 50.0% | |
| TGGATGGAGAGGGAATGAGA+GGG | + | chr1.3:43501687-43501706 | None:intergenic | 50.0% | |
| TTGGAACTTACGCGAGGTCT+TGG | - | chr1.3:43497454-43497473 | MS.gene81745:intron | 50.0% | |
| ! | ACAGACTAGTCAGCTCACTC+AGG | - | chr1.3:43501745-43501764 | MS.gene81745:CDS | 50.0% |
| ! | CAGACTAGTCAGCTCACTCA+GGG | - | chr1.3:43501746-43501765 | MS.gene81745:CDS | 50.0% |
| ! | GAACCGTCTGCAGATTGGTT+TGG | - | chr1.3:43497435-43497454 | MS.gene81745:CDS | 50.0% |
| ! | GTGGTACTGGGAAGTTGCTA+GGG | - | chr1.3:43499902-43499921 | MS.gene81745:CDS | 50.0% |
| ! | TGGTACTGGGAAGTTGCTAG+GGG | - | chr1.3:43499903-43499922 | MS.gene81745:CDS | 50.0% |
| !! | GGGTAGTTCTAGTTTGGGTG+AGG | - | chr1.3:43497222-43497241 | MS.gene81745:CDS | 50.0% |
| AACGTTAACCAGTGCCCTCG+GGG | + | chr1.3:43498453-43498472 | None:intergenic | 55.0% | |
| AAGGACGCTCACGCTATCCT+AGG | - | chr1.3:43501855-43501874 | MS.gene81745:CDS | 55.0% | |
| ACCTTGGAGTATGCTCCCCA+AGG | - | chr1.3:43500200-43500219 | MS.gene81745:intron | 55.0% | |
| ACTGCTTAACCAATGCCCCG+AGG | - | chr1.3:43498435-43498454 | MS.gene81745:intron | 55.0% | |
| AGCTGGTGGTAACCCTGAGA+TGG | - | chr1.3:43497477-43497496 | MS.gene81745:intron | 55.0% | |
| AGGACGCTCACGCTATCCTA+GGG | - | chr1.3:43501856-43501875 | MS.gene81745:CDS | 55.0% | |
| AGGCTCGAACCAGAGACCTT+GGG | + | chr1.3:43500219-43500238 | None:intergenic | 55.0% | |
| AGTATGCTCCCCAAGGTCTC+TGG | - | chr1.3:43500207-43500226 | MS.gene81745:intron | 55.0% | |
| ATTCCTTAACCAGTGCCCCC+GGG | + | chr1.3:43498323-43498342 | None:intergenic | 55.0% | |
| CAGCATTTCCGGGTATCCCT+AGG | - | chr1.3:43500947-43500966 | MS.gene81745:intron | 55.0% | |
| CCAATCTGCAGACGGTTCTC+AGG | + | chr1.3:43497433-43497452 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+CGG | - | chr1.3:43498709-43498728 | MS.gene81745:intron | 55.0% | |
| CCTGAGAACCGTCTGCAGAT+TGG | - | chr1.3:43497430-43497449 | MS.gene81745:CDS | 55.0% | |
| CTGCTTAACCAATGCCCCGA+GGG | - | chr1.3:43498436-43498455 | MS.gene81745:intron | 55.0% | |
| GAACGTTAACCAGTGCCCTC+GGG | + | chr1.3:43498454-43498473 | None:intergenic | 55.0% | |
| GATTCCTTAACCAGTGCCCC+CGG | + | chr1.3:43498324-43498343 | None:intergenic | 55.0% | |
| GCTGGTGGTAACCCTGAGAT+GGG | - | chr1.3:43497478-43497497 | MS.gene81745:intron | 55.0% | |
| GGTGGTGCTCCGATTATTGC+TGG | - | chr1.3:43498978-43498997 | MS.gene81745:intron | 55.0% | |
| GTGAGCTTAGCTCAGTCGGT+AGG | - | chr1.3:43498713-43498732 | MS.gene81745:intron | 55.0% | |
| TAGAGGTGAGGCGAGTAGCA+CGG | - | chr1.3:43497183-43497202 | MS.gene81745:CDS | 55.0% | |
| TCTTGTTAACCAGTGCCCCG+GGG | - | chr1.3:43498304-43498323 | MS.gene81745:CDS | 55.0% | |
| ! | ACCTTGGGGAGCATACTCCA+AGG | + | chr1.3:43500204-43500223 | None:intergenic | 55.0% |
| ! | ATTCTTCGACAGGGCGTTCG+TGG | - | chr1.3:43499209-43499228 | MS.gene81745:intron | 55.0% |
| ! | CGTGGTACTGGGAAGTTGCT+AGG | - | chr1.3:43499901-43499920 | MS.gene81745:CDS | 55.0% |
| ! | CTTTTGCAGGCTGGAATGGG+TGG | - | chr1.3:43498942-43498961 | MS.gene81745:intron | 55.0% |
| ! | GTCTTGTTAACCAGTGCCCC+GGG | - | chr1.3:43498303-43498322 | MS.gene81745:CDS | 55.0% |
| !! | AGCCTCCTCGGTGCCAATTT+GGG | - | chr1.3:43500234-43500253 | MS.gene81745:intron | 55.0% |
| !! | AGGAGGTGGTGGATCTAACG+CGG | - | chr1.3:43497318-43497337 | MS.gene81745:intron | 55.0% |
| !! | GGTCTTGTTAACCAGTGCCC+CGG | - | chr1.3:43498302-43498321 | MS.gene81745:CDS | 55.0% |
| !! | GTGGTGTTGGCTTGAGACCT+TGG | - | chr1.3:43500184-43500203 | MS.gene81745:intron | 55.0% |
| !! | TCCTCGGTGCCAATTTGGGT+GGG | - | chr1.3:43500238-43500257 | MS.gene81745:intron | 55.0% |
| CCGACTGAGCTAAGCTCACG+AGG | + | chr1.3:43498712-43498731 | None:intergenic | 60.0% | |
| CTGAGTGCAGATCCCTGGGA+TGG | - | chr1.3:43499343-43499362 | MS.gene81745:CDS | 60.0% | |
| CTTACGCGAGGTCTTGGAGC+TGG | - | chr1.3:43497460-43497479 | MS.gene81745:intron | 60.0% | |
| CTTGTTAACCAGTGCCCCGG+GGG | - | chr1.3:43498305-43498324 | MS.gene81745:CDS | 60.0% | |
| GAGGCTCGAACCAGAGACCT+TGG | + | chr1.3:43500220-43500239 | None:intergenic | 60.0% | |
| GGCTCGAACCAGAGACCTTG+GGG | + | chr1.3:43500218-43500237 | None:intergenic | 60.0% | |
| GGTCTCAAGCCAACACCACC+AGG | + | chr1.3:43500183-43500202 | None:intergenic | 60.0% | |
| TTCCTTAACCAGTGCCCCCG+GGG | + | chr1.3:43498322-43498341 | None:intergenic | 60.0% | |
| TTGCAGGCTGGAATGGGTGG+TGG | - | chr1.3:43498945-43498964 | MS.gene81745:intron | 60.0% | |
| ! | AATCGGAGCACCACCTGTGC+CGG | + | chr1.3:43498973-43498992 | None:intergenic | 60.0% |
| ! | CACCCAAATTGGCACCGAGG+AGG | + | chr1.3:43500239-43500258 | None:intergenic | 60.0% |
| ! | GTCTCTGGTTCGAGCCTCCT+CGG | - | chr1.3:43500222-43500241 | MS.gene81745:intron | 60.0% |
| !! | CTCCTCGGTGCCAATTTGGG+TGG | - | chr1.3:43500237-43500256 | MS.gene81745:intron | 60.0% |
| !! | GAGCCTCCTCGGTGCCAATT+TGG | - | chr1.3:43500233-43500252 | MS.gene81745:intron | 60.0% |
| !! | GCTGGAATGGGTGGTGGAAC+CGG | - | chr1.3:43498951-43498970 | MS.gene81745:intron | 60.0% |
| AACCAGTGCCCTCGGGGCAT+TGG | + | chr1.3:43498447-43498466 | None:intergenic | 65.0% | |
| ACGCGAGGTCTTGGAGCTGG+TGG | - | chr1.3:43497463-43497482 | MS.gene81745:intron | 65.0% | |
| GCCCACCCAAATTGGCACCG+AGG | + | chr1.3:43500242-43500261 | None:intergenic | 65.0% | |
| ! | AACCAATGCCCCGAGGGCAC+TGG | - | chr1.3:43498442-43498461 | MS.gene81745:intron | 65.0% |
| !! | ATGGGTGGTGGAACCGGCAC+AGG | - | chr1.3:43498957-43498976 | MS.gene81745:intron | 65.0% |
| !! | GGTGGTGGAACCGGCACAGG+TGG | - | chr1.3:43498960-43498979 | MS.gene81745:intron | 70.0% |
| !! | TGCCCCGGGGGCACTGGTTA+AGG | - | chr1.3:43498317-43498336 | MS.gene81745:intron | 70.0% |
| AACCAGTGCCCCCGGGGCAC+TGG | + | chr1.3:43498316-43498335 | None:intergenic | 75.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+TGG | - | chr1.3:43498311-43498330 | MS.gene81745:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 43497178 | 43501883 | 43497178 | ID=MS.gene81745 |
| chr1.3 | mRNA | 43497178 | 43501883 | 43497178 | ID=MS.gene81745.t1;Parent=MS.gene81745 |
| chr1.3 | exon | 43501488 | 43501883 | 43501488 | ID=MS.gene81745.t1.exon1;Parent=MS.gene81745.t1 |
| chr1.3 | CDS | 43501488 | 43501883 | 43501488 | ID=cds.MS.gene81745.t1;Parent=MS.gene81745.t1 |
| chr1.3 | exon | 43499811 | 43500110 | 43499811 | ID=MS.gene81745.t1.exon2;Parent=MS.gene81745.t1 |
| chr1.3 | CDS | 43499811 | 43500110 | 43499811 | ID=cds.MS.gene81745.t1;Parent=MS.gene81745.t1 |
| chr1.3 | exon | 43499618 | 43499708 | 43499618 | ID=MS.gene81745.t1.exon3;Parent=MS.gene81745.t1 |
| chr1.3 | CDS | 43499618 | 43499708 | 43499618 | ID=cds.MS.gene81745.t1;Parent=MS.gene81745.t1 |
| chr1.3 | exon | 43499295 | 43499419 | 43499295 | ID=MS.gene81745.t1.exon4;Parent=MS.gene81745.t1 |
| chr1.3 | CDS | 43499295 | 43499419 | 43499295 | ID=cds.MS.gene81745.t1;Parent=MS.gene81745.t1 |
| chr1.3 | exon | 43498243 | 43498335 | 43498243 | ID=MS.gene81745.t1.exon5;Parent=MS.gene81745.t1 |
| chr1.3 | CDS | 43498243 | 43498335 | 43498243 | ID=cds.MS.gene81745.t1;Parent=MS.gene81745.t1 |
| chr1.3 | exon | 43497393 | 43497458 | 43497393 | ID=MS.gene81745.t1.exon6;Parent=MS.gene81745.t1 |
| chr1.3 | CDS | 43497393 | 43497458 | 43497393 | ID=cds.MS.gene81745.t1;Parent=MS.gene81745.t1 |
| chr1.3 | exon | 43497178 | 43497312 | 43497178 | ID=MS.gene81745.t1.exon7;Parent=MS.gene81745.t1 |
| chr1.3 | CDS | 43497178 | 43497312 | 43497178 | ID=cds.MS.gene81745.t1;Parent=MS.gene81745.t1 |
| Gene Sequence |
| Protein sequence |
