Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89378.t1 | XP_013447791.1 | 98.2 | 225 | 4 | 0 | 1 | 225 | 68 | 292 | 5.10E-126 | 460.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89378.t1 | Q9ZW82 | 72.5 | 229 | 59 | 2 | 1 | 225 | 93 | 321 | 1.6e-96 | 353.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89378.t1 | A0A072TVC4 | 98.2 | 225 | 4 | 0 | 1 | 225 | 68 | 292 | 3.7e-126 | 460.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene89378 | 0.810103 | 1.36E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene89378 | 0.807455 | 5.01E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene89378 | 0.854371 | 1.29E-61 | -1.69E-46 |
| MS.gene050085 | MS.gene89378 | 0.803095 | 4.11E-49 | -1.69E-46 |
| MS.gene050213 | MS.gene89378 | 0.820239 | 7.62E-53 | -1.69E-46 |
| MS.gene050359 | MS.gene89378 | 0.811202 | 7.88E-51 | -1.69E-46 |
| MS.gene050414 | MS.gene89378 | 0.80001 | 1.76E-48 | -1.69E-46 |
| MS.gene050646 | MS.gene89378 | 0.803389 | 3.57E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene89378 | 0.846426 | 2.19E-59 | -1.69E-46 |
| MS.gene050941 | MS.gene89378 | 0.824143 | 9.47E-54 | -1.69E-46 |
| MS.gene051003 | MS.gene89378 | 0.821982 | 3.02E-53 | -1.69E-46 |
| MS.gene051184 | MS.gene89378 | 0.815595 | 8.53E-52 | -1.69E-46 |
| MS.gene051234 | MS.gene89378 | 0.808254 | 3.39E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene89378 | 0.812637 | 3.83E-51 | -1.69E-46 |
| MS.gene052016 | MS.gene89378 | 0.833131 | 6.36E-56 | -1.69E-46 |
| MS.gene052296 | MS.gene89378 | 0.810745 | 9.90E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene89378 | 0.814553 | 1.45E-51 | -1.69E-46 |
| MS.gene052342 | MS.gene89378 | 0.838058 | 3.60E-57 | -1.69E-46 |
| MS.gene052463 | MS.gene89378 | 0.815765 | 7.82E-52 | -1.69E-46 |
| MS.gene053143 | MS.gene89378 | 0.80964 | 1.71E-50 | -1.69E-46 |
| MS.gene053726 | MS.gene89378 | 0.828079 | 1.10E-54 | -1.69E-46 |
| MS.gene053786 | MS.gene89378 | 0.807591 | 4.69E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene89378 | 0.810349 | 1.20E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene89378 | 0.817176 | 3.78E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene89378 | 0.823176 | 1.59E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene89378 | 0.805573 | 1.25E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene89378 | 0.836067 | 1.16E-56 | -1.69E-46 |
| MS.gene057890 | MS.gene89378 | -0.80355 | 3.30E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene89378 | 0.809308 | 2.02E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene89378 | 0.816422 | 5.58E-52 | -1.69E-46 |
| MS.gene059170 | MS.gene89378 | 0.845359 | 4.27E-59 | -1.69E-46 |
| MS.gene06010 | MS.gene89378 | 0.826452 | 2.69E-54 | -1.69E-46 |
| MS.gene060563 | MS.gene89378 | 0.80741 | 5.12E-50 | -1.69E-46 |
| MS.gene060870 | MS.gene89378 | 0.807051 | 6.10E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene89378 | 0.830611 | 2.66E-55 | -1.69E-46 |
| MS.gene061006 | MS.gene89378 | 0.816127 | 6.49E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene89378 | 0.851704 | 7.46E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 44 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGATGAGGCTAAATTAT+AGG | 0.245605 | 7.1:-87872241 | MS.gene89378:CDS |
| CTTAGAAGTTCTTGATAGTT+TGG | 0.247944 | 7.1:+87872689 | None:intergenic |
| GTTTGATGAACTTGAGTTCC+TGG | 0.312165 | 7.1:+87872542 | None:intergenic |
| AAAGGACCATATTGAGCAAT+AGG | 0.387063 | 7.1:+87872329 | None:intergenic |
| AATGAACCTATTGCTCAATA+TGG | 0.391955 | 7.1:-87872335 | MS.gene89378:CDS |
| ACTATTGAAGACTATCAATA+TGG | 0.403357 | 7.1:-87872275 | MS.gene89378:CDS |
| ATAACTCTTCAAAGCCTTTG+AGG | 0.406915 | 7.1:-87872385 | MS.gene89378:CDS |
| CCTTTGAGGTTTGTGCTCAT+TGG | 0.408779 | 7.1:-87872371 | MS.gene89378:CDS |
| AAGGTGATGGACTTAGTGTT+TGG | 0.411445 | 7.1:-87872412 | MS.gene89378:CDS |
| AGTGATAGCAGGAGAATCAA+TGG | 0.413770 | 7.1:-87872624 | MS.gene89378:CDS |
| TCATTTGCATACATAATTGA+AGG | 0.440817 | 7.1:-87872500 | MS.gene89378:CDS |
| CTTGAGTGAAAACAATGATA+TGG | 0.447295 | 7.1:+87872432 | None:intergenic |
| TTGAGGTTTGTGCTCATTGG+TGG | 0.448207 | 7.1:-87872368 | MS.gene89378:CDS |
| AATCAGAACTGGTGATGTTC+AGG | 0.449423 | 7.1:-87873442 | MS.gene89378:intron |
| CTTGATTTCACCATGATGCC+AGG | 0.451578 | 7.1:-87872560 | MS.gene89378:CDS |
| TGAGCAATAGGTTCATTCAA+TGG | 0.465412 | 7.1:+87872341 | None:intergenic |
| CCTTGTGGCCAGCAAAATCT+TGG | 0.466878 | 7.1:+87873469 | None:intergenic |
| ACAAAATTCATCACCAATTG+TGG | 0.472578 | 7.1:-87872459 | MS.gene89378:CDS |
| TTTGTGCAGTGGATGACTGC+AGG | 0.482155 | 7.1:-87873314 | MS.gene89378:intron |
| CACAAGGGTACAATCAGAAC+TGG | 0.492820 | 7.1:-87873453 | MS.gene89378:CDS |
| AAAACAATGGACTGCAATTG+TGG | 0.498536 | 7.1:-87873253 | MS.gene89378:CDS |
| GACTATCAATATGGTAGGAA+TGG | 0.507862 | 7.1:-87872266 | MS.gene89378:CDS |
| CTGGCATCATGGTGAAATCA+AGG | 0.508793 | 7.1:+87872561 | None:intergenic |
| GATTGTGTATTCATGACAAA+AGG | 0.515755 | 7.1:+87872311 | None:intergenic |
| GTTGGTGTTCTTGTGTAGAC+AGG | 0.520089 | 7.1:+87872590 | None:intergenic |
| GTGATAGCAGGAGAATCAAT+GGG | 0.534226 | 7.1:-87872623 | MS.gene89378:CDS |
| ATGATATGGTGAGCCACAAT+TGG | 0.536674 | 7.1:+87872446 | None:intergenic |
| GCAAATGAATTCCATGACTC+AGG | 0.546190 | 7.1:+87872515 | None:intergenic |
| ATCAAACTATTCCTGAGTCA+TGG | 0.547660 | 7.1:-87872526 | MS.gene89378:CDS |
| CAGTTCTGATTGTACCCTTG+TGG | 0.562943 | 7.1:+87873454 | None:intergenic |
| TTGTGCAGTGGATGACTGCA+GGG | 0.569971 | 7.1:-87873313 | MS.gene89378:intron |
| TTGAAGACTATCAATATGGT+AGG | 0.576598 | 7.1:-87872271 | MS.gene89378:CDS |
| GTTGAAGTGAGAGTGATAGC+AGG | 0.579971 | 7.1:-87872635 | MS.gene89378:CDS |
| GCATACATAATTGAAGGAGA+AGG | 0.591101 | 7.1:-87872494 | MS.gene89378:CDS |
| CTAAGTGAGAACATACCATC+GGG | 0.591270 | 7.1:-87872671 | MS.gene89378:CDS |
| GCAGTGGATGACTGCAGGGA+GGG | 0.592783 | 7.1:-87873309 | MS.gene89378:intron |
| AACTTGAGTTCCTGGCATCA+TGG | 0.595280 | 7.1:+87872550 | None:intergenic |
| CAGTGGATGACTGCAGGGAG+GGG | 0.597592 | 7.1:-87873308 | MS.gene89378:CDS |
| CATGGTGAAATCAAGGAACA+TGG | 0.604059 | 7.1:+87872568 | None:intergenic |
| CCAATGAGCACAAACCTCAA+AGG | 0.613431 | 7.1:+87872371 | None:intergenic |
| TCTAAGTGAGAACATACCAT+CGG | 0.619506 | 7.1:-87872672 | MS.gene89378:CDS |
| TGCAGTGGATGACTGCAGGG+AGG | 0.648962 | 7.1:-87873310 | MS.gene89378:intron |
| GACAGTCAGCTACATGCTAG+AGG | 0.657626 | 7.1:-87873726 | MS.gene89378:intron |
| GTGAAATCAAGGAACATGGT+TGG | 0.672435 | 7.1:+87872572 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAATCTATAATCTAT+AGG | - | chr7.1:87873092-87873111 | MS.gene89378:intron | 10.0% |
| !! | ATTATAATCTATAATCTATA+GGG | - | chr7.1:87873093-87873112 | MS.gene89378:intron | 10.0% |
| !! | TATACTAAAATTGATTAACT+AGG | + | chr7.1:87872842-87872861 | None:intergenic | 15.0% |
| !!! | GCAATTAATTTATTTTCTTT+AGG | - | chr7.1:87872346-87872365 | MS.gene89378:CDS | 15.0% |
| !! | AAAAACATAAGAAGCTTAAA+TGG | - | chr7.1:87872589-87872608 | MS.gene89378:CDS | 20.0% |
| !! | AATGCAATATATATAGTGTA+AGG | - | chr7.1:87872955-87872974 | MS.gene89378:intron | 20.0% |
| !! | AGATTTAGACTTCTTAAATA+AGG | + | chr7.1:87872915-87872934 | None:intergenic | 20.0% |
| !! | CTATATATATTGCATTACAT+TGG | + | chr7.1:87872951-87872970 | None:intergenic | 20.0% |
| !! | GTAAAAATAATGACCTTAAT+CGG | + | chr7.1:87873211-87873230 | None:intergenic | 20.0% |
| !! | TAATCTATAGGGATAAAAAT+TGG | - | chr7.1:87873104-87873123 | MS.gene89378:intron | 20.0% |
| !!! | TTATGATCAATTAGTGTTTT+TGG | + | chr7.1:87872559-87872578 | None:intergenic | 20.0% |
| ! | ACTATTGAAGACTATCAATA+TGG | - | chr7.1:87873690-87873709 | MS.gene89378:intron | 25.0% |
| ! | ATAAGAAGCTTAAATGGAAT+TGG | - | chr7.1:87872595-87872614 | MS.gene89378:CDS | 25.0% |
| ! | ATATATGTTATGTCTAGTGT+CGG | - | chr7.1:87872383-87872402 | MS.gene89378:CDS | 25.0% |
| ! | TCATTTGCATACATAATTGA+AGG | - | chr7.1:87873465-87873484 | MS.gene89378:CDS | 25.0% |
| !! | CTTAATCGGTTCAATAATAA+CGG | + | chr7.1:87873197-87873216 | None:intergenic | 25.0% |
| !! | TCTAAAAAGTTTTGCATTGT+TGG | - | chr7.1:87872452-87872471 | MS.gene89378:CDS | 25.0% |
| !!! | ATGAAAAAAGTATTGTTGGA+AGG | + | chr7.1:87872871-87872890 | None:intergenic | 25.0% |
| !!! | CTTTGTTTAACTTTTGATTC+AGG | - | chr7.1:87873247-87873266 | MS.gene89378:CDS | 25.0% |
| !!! | GTGAATGAAAAAAGTATTGT+TGG | + | chr7.1:87872875-87872894 | None:intergenic | 25.0% |
| !!! | TCTTTTTCAATTCTTCTCTA+GGG | - | chr7.1:87873056-87873075 | MS.gene89378:intron | 25.0% |
| !!! | TGAAAAAAGTATTGTTGGAA+GGG | + | chr7.1:87872870-87872889 | None:intergenic | 25.0% |
| AATGAACCTATTGCTCAATA+TGG | - | chr7.1:87873630-87873649 | MS.gene89378:intron | 30.0% | |
| ACAAAATTCATCACCAATTG+TGG | - | chr7.1:87873506-87873525 | MS.gene89378:intron | 30.0% | |
| CGTTATTATTGAACCGATTA+AGG | - | chr7.1:87873195-87873214 | MS.gene89378:intron | 30.0% | |
| CTTGAGTGAAAACAATGATA+TGG | + | chr7.1:87873536-87873555 | None:intergenic | 30.0% | |
| GATTGTGTATTCATGACAAA+AGG | + | chr7.1:87873657-87873676 | None:intergenic | 30.0% | |
| GCTAAATTATAGGTCTCAAT+AGG | - | chr7.1:87873734-87873753 | MS.gene89378:CDS | 30.0% | |
| TTGAAGACTATCAATATGGT+AGG | - | chr7.1:87873694-87873713 | MS.gene89378:intron | 30.0% | |
| TTGAGATGAGGCTAAATTAT+AGG | - | chr7.1:87873724-87873743 | MS.gene89378:intron | 30.0% | |
| ! | CATATCATTGTTTTCACTCA+AGG | - | chr7.1:87873534-87873553 | MS.gene89378:intron | 30.0% |
| ! | CTTAGAAGTTCTTGATAGTT+TGG | + | chr7.1:87873279-87873298 | None:intergenic | 30.0% |
| ! | TTTTGCATTGTTGGAATTCA+GGG | - | chr7.1:87872461-87872480 | MS.gene89378:CDS | 30.0% |
| !! | GAAAAAAGTATTGTTGGAAG+GGG | + | chr7.1:87872869-87872888 | None:intergenic | 30.0% |
| !!! | GTCTTTTTCAATTCTTCTCT+AGG | - | chr7.1:87873055-87873074 | MS.gene89378:intron | 30.0% |
| AAAGGACCATATTGAGCAAT+AGG | + | chr7.1:87873639-87873658 | None:intergenic | 35.0% | |
| AACGGTTCAAAACTTTGTCA+TGG | + | chr7.1:87873179-87873198 | None:intergenic | 35.0% | |
| ATAACTCTTCAAAGCCTTTG+AGG | - | chr7.1:87873580-87873599 | MS.gene89378:intron | 35.0% | |
| ATCAAACTATTCCTGAGTCA+TGG | - | chr7.1:87873439-87873458 | MS.gene89378:intron | 35.0% | |
| CATGATGAACATTGGAAACA+CGG | + | chr7.1:87872304-87872323 | None:intergenic | 35.0% | |
| GACTATCAATATGGTAGGAA+TGG | - | chr7.1:87873699-87873718 | MS.gene89378:intron | 35.0% | |
| GCATACATAATTGAAGGAGA+AGG | - | chr7.1:87873471-87873490 | MS.gene89378:CDS | 35.0% | |
| GTCAGTATCATGATGAACAT+TGG | + | chr7.1:87872312-87872331 | None:intergenic | 35.0% | |
| TCTAAGTGAGAACATACCAT+CGG | - | chr7.1:87873293-87873312 | MS.gene89378:CDS | 35.0% | |
| TGAGCAATAGGTTCATTCAA+TGG | + | chr7.1:87873627-87873646 | None:intergenic | 35.0% | |
| ! | ATAACTCACCAAGATTTTGC+TGG | - | chr7.1:87872488-87872507 | MS.gene89378:CDS | 35.0% |
| ! | ATTGTTTTCACTCAAGGTGA+TGG | - | chr7.1:87873540-87873559 | MS.gene89378:intron | 35.0% |
| ! | GTTTTGCATTGTTGGAATTC+AGG | - | chr7.1:87872460-87872479 | MS.gene89378:CDS | 35.0% |
| !! | AAAACAATGGACTGCAATTG+TGG | - | chr7.1:87872712-87872731 | MS.gene89378:intron | 35.0% |
| !!! | ATCTGTCTTTTTTTGTGCAG+TGG | - | chr7.1:87872640-87872659 | MS.gene89378:CDS | 35.0% |
| !!! | ATTGAAGGAGAAGGTGTTTT+TGG | - | chr7.1:87873480-87873499 | MS.gene89378:CDS | 35.0% |
| AGTGATAGCAGGAGAATCAA+TGG | - | chr7.1:87873341-87873360 | MS.gene89378:intron | 40.0% | |
| ATACCATCGGGAGAAAAAGA+TGG | - | chr7.1:87873306-87873325 | MS.gene89378:CDS | 40.0% | |
| ATGATATGGTGAGCCACAAT+TGG | + | chr7.1:87873522-87873541 | None:intergenic | 40.0% | |
| CATGGTGAAATCAAGGAACA+TGG | + | chr7.1:87873400-87873419 | None:intergenic | 40.0% | |
| CCTGCAGAAGCAAAAAACAA+TGG | - | chr7.1:87872699-87872718 | MS.gene89378:CDS | 40.0% | |
| CTAAGTGAGAACATACCATC+GGG | - | chr7.1:87873294-87873313 | MS.gene89378:CDS | 40.0% | |
| GCAAATGAATTCCATGACTC+AGG | + | chr7.1:87873453-87873472 | None:intergenic | 40.0% | |
| GTGAAATCAAGGAACATGGT+TGG | + | chr7.1:87873396-87873415 | None:intergenic | 40.0% | |
| GTGATAGCAGGAGAATCAAT+GGG | - | chr7.1:87873342-87873361 | MS.gene89378:intron | 40.0% | |
| GTTTGATGAACTTGAGTTCC+TGG | + | chr7.1:87873426-87873445 | None:intergenic | 40.0% | |
| ! | AATCAGAACTGGTGATGTTC+AGG | - | chr7.1:87872523-87872542 | MS.gene89378:CDS | 40.0% |
| !! | AAGGTGATGGACTTAGTGTT+TGG | - | chr7.1:87873553-87873572 | MS.gene89378:intron | 40.0% |
| !!! | CCATTGTTTTTTGCTTCTGC+AGG | + | chr7.1:87872702-87872721 | None:intergenic | 40.0% |
| !!! | GTAGGAATGGTTTTGAGATG+AGG | - | chr7.1:87873712-87873731 | MS.gene89378:intron | 40.0% |
| AACTTGAGTTCCTGGCATCA+TGG | + | chr7.1:87873418-87873437 | None:intergenic | 45.0% | |
| ACATTGGAAACACGGAAGTG+TGG | + | chr7.1:87872296-87872315 | None:intergenic | 45.0% | |
| CCAATGAGCACAAACCTCAA+AGG | + | chr7.1:87873597-87873616 | None:intergenic | 45.0% | |
| CTGGCATCATGGTGAAATCA+AGG | + | chr7.1:87873407-87873426 | None:intergenic | 45.0% | |
| CTTGATTTCACCATGATGCC+AGG | - | chr7.1:87873405-87873424 | MS.gene89378:intron | 45.0% | |
| GTTGAAGTGAGAGTGATAGC+AGG | - | chr7.1:87873330-87873349 | MS.gene89378:intron | 45.0% | |
| TGCATTGTTGGAATTCAGGG+AGG | - | chr7.1:87872464-87872483 | MS.gene89378:CDS | 45.0% | |
| TTGAGGTTTGTGCTCATTGG+TGG | - | chr7.1:87873597-87873616 | MS.gene89378:intron | 45.0% | |
| ! | ACACCATCTTTTTCTCCCGA+TGG | + | chr7.1:87873312-87873331 | None:intergenic | 45.0% |
| ! | ACGGAAGTGTGGTACAAAGA+TGG | + | chr7.1:87872285-87872304 | None:intergenic | 45.0% |
| ! | AGAACTGGTGATGTTCAGGT+AGG | - | chr7.1:87872527-87872546 | MS.gene89378:CDS | 45.0% |
| ! | CAAGATTTTGCTGGCCACAA+GGG | - | chr7.1:87872497-87872516 | MS.gene89378:CDS | 45.0% |
| ! | CACAAGGGTACAATCAGAAC+TGG | - | chr7.1:87872512-87872531 | MS.gene89378:CDS | 45.0% |
| ! | CAGTTCTGATTGTACCCTTG+TGG | + | chr7.1:87872514-87872533 | None:intergenic | 45.0% |
| ! | GTTGGTGTTCTTGTGTAGAC+AGG | + | chr7.1:87873378-87873397 | None:intergenic | 45.0% |
| !! | CCTTTGAGGTTTGTGCTCAT+TGG | - | chr7.1:87873594-87873613 | MS.gene89378:intron | 45.0% |
| !! | CTATTATAATATAAAATATA+TGG | - | chr7.1:87873151-87873170 | MS.gene89378:intron | 5.0% |
| !!! | TGTATTTTTAATTATTTTAT+TGG | - | chr7.1:87872775-87872794 | MS.gene89378:intron | 5.0% |
| CCTTGTGGCCAGCAAAATCT+TGG | + | chr7.1:87872499-87872518 | None:intergenic | 50.0% | |
| GACAGTCAGCTACATGCTAG+AGG | - | chr7.1:87872239-87872258 | MS.gene89378:CDS | 50.0% | |
| TTGTGCAGTGGATGACTGCA+GGG | - | chr7.1:87872652-87872671 | MS.gene89378:CDS | 50.0% | |
| TTTGTGCAGTGGATGACTGC+AGG | - | chr7.1:87872651-87872670 | MS.gene89378:CDS | 50.0% | |
| ! | ACTGGTGATGTTCAGGTAGG+TGG | - | chr7.1:87872530-87872549 | MS.gene89378:CDS | 50.0% |
| ! | CCAAGATTTTGCTGGCCACA+AGG | - | chr7.1:87872496-87872515 | MS.gene89378:CDS | 50.0% |
| CAGTGGATGACTGCAGGGAG+GGG | - | chr7.1:87872657-87872676 | MS.gene89378:CDS | 60.0% | |
| GCAGTGGATGACTGCAGGGA+GGG | - | chr7.1:87872656-87872675 | MS.gene89378:CDS | 60.0% | |
| TGCAGTGGATGACTGCAGGG+AGG | - | chr7.1:87872655-87872674 | MS.gene89378:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 87872232 | 87873755 | 87872232 | ID=MS.gene89378 |
| chr7.1 | mRNA | 87872232 | 87873755 | 87872232 | ID=MS.gene89378.t1;Parent=MS.gene89378 |
| chr7.1 | exon | 87873727 | 87873755 | 87873727 | ID=MS.gene89378.t1.exon1;Parent=MS.gene89378.t1 |
| chr7.1 | CDS | 87873727 | 87873755 | 87873727 | ID=cds.MS.gene89378.t1;Parent=MS.gene89378.t1 |
| chr7.1 | exon | 87873443 | 87873505 | 87873443 | ID=MS.gene89378.t1.exon2;Parent=MS.gene89378.t1 |
| chr7.1 | CDS | 87873443 | 87873505 | 87873443 | ID=cds.MS.gene89378.t1;Parent=MS.gene89378.t1 |
| chr7.1 | exon | 87873227 | 87873327 | 87873227 | ID=MS.gene89378.t1.exon3;Parent=MS.gene89378.t1 |
| chr7.1 | CDS | 87873227 | 87873327 | 87873227 | ID=cds.MS.gene89378.t1;Parent=MS.gene89378.t1 |
| chr7.1 | exon | 87872232 | 87872718 | 87872232 | ID=MS.gene89378.t1.exon4;Parent=MS.gene89378.t1 |
| chr7.1 | CDS | 87872232 | 87872718 | 87872232 | ID=cds.MS.gene89378.t1;Parent=MS.gene89378.t1 |
| Gene Sequence |
| Protein sequence |
