AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054707


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054707.t1 MTR_5g045160 88.789 669 52 4 1 651 1 664 0.0 1157
MS.gene054707.t1 MTR_6g445440 83.896 652 88 4 1 651 1 636 0.0 1095
MS.gene054707.t1 MTR_3g103410 70.932 719 124 5 3 651 4 707 0.0 1005
MS.gene054707.t1 MTR_5g045130 86.056 502 59 2 157 651 2 499 0.0 883
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054707.t1 AT5G13210 58.884 681 242 6 1 651 1 673 0.0 809
MS.gene054707.t1 AT5G43400 56.975 681 237 9 1 651 1 655 0.0 771
MS.gene054707.t1 AT5G43390 55.769 676 236 9 2 651 5 643 0.0 739
MS.gene054707.t1 AT3G24780 57.990 607 200 5 55 616 107 703 0.0 724

Find 201 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGGTGGTGAGTGGATTT+TGG 0.203979 5.3:+32731994 None:intergenic
ATCATGAAGAAACTTGAAAT+TGG 0.206773 5.3:+32731512 None:intergenic
TCATGAGATTATAGGGTCTT+TGG 0.221619 5.3:-32731046 MS.gene054707:CDS
GTGTTAGTGGTGGTAGGGTT+AGG 0.222334 5.3:+32732239 None:intergenic
GCCTCAGCTTCATGTGATTC+AGG 0.257750 5.3:-32730809 MS.gene054707:CDS
GAATCTGCTGACATTGTTCT+TGG 0.268467 5.3:-32730446 MS.gene054707:CDS
TTGCTTCCTCATGAGATTAT+AGG 0.271882 5.3:-32731054 MS.gene054707:CDS
AAATCAGTCTTGCTGCTAAA+TGG 0.287484 5.3:-32731419 MS.gene054707:CDS
TCAACCCCATCGATGGGTTT+TGG 0.288529 5.3:+32732135 None:intergenic
CCCTTCTTTGTCAGACTTAC+CGG 0.294979 5.3:+32731938 None:intergenic
GATGTGTCTGGGAGCATGTC+TGG 0.302383 5.3:-32730925 MS.gene054707:CDS
GTCTGTGGCATTGGGGTTGT+TGG 0.311302 5.3:-32730887 MS.gene054707:CDS
ATATGCGATCAAACACCTTC+TGG 0.312936 5.3:+32730722 None:intergenic
GGTTCTACGCCGCTGCTCTA+TGG 0.315868 5.3:-32731917 MS.gene054707:CDS
GAATTGCCTGAGGTGTTTAT+TGG 0.320710 5.3:-32731228 MS.gene054707:CDS
ATGGAGGTGTCTGTGGCATT+GGG 0.321729 5.3:-32730895 MS.gene054707:CDS
TATGGAGGTGTCTGTGGCAT+TGG 0.327031 5.3:-32730896 MS.gene054707:CDS
CTTGCAGTGTGTGATGTGTC+TGG 0.344032 5.3:-32730937 MS.gene054707:CDS
GGGATTTGATTCCTTACAAT+AGG 0.344162 5.3:-32731194 MS.gene054707:CDS
TGCTTCCTCATGAGATTATA+GGG 0.353445 5.3:-32731053 MS.gene054707:CDS
CTGTGCCTCAGATAGTCTTT+TGG 0.356529 5.3:-32730543 MS.gene054707:CDS
CCATGGTTCCTCACTCAATT+CGG 0.357198 5.3:+32730861 None:intergenic
CATGAGATTATAGGGTCTTT+GGG 0.360120 5.3:-32731045 MS.gene054707:CDS
AGAAGACGGTAGAGGATCTC+AGG 0.360575 5.3:+32731819 None:intergenic
TGTTAGTGGTGGTAGGGTTA+GGG 0.364081 5.3:+32732240 None:intergenic
ATCAAGCGTCTGCAAACTCT+TGG 0.365158 5.3:-32730621 MS.gene054707:CDS
GACACAGTTCGTGAGGGATA+TGG 0.369160 5.3:-32730767 MS.gene054707:CDS
AGGAGGCGCATTATGCTTAT+AGG 0.369882 5.3:-32731302 MS.gene054707:CDS
TGTTTATTGGTTCTAATCAA+TGG 0.370352 5.3:-32731215 MS.gene054707:CDS
GTCAGCGAGGGAAGGAATAT+TGG 0.378142 5.3:+32731863 None:intergenic
GTTGATGATTTGCTTAAGAA+AGG 0.386144 5.3:-32730976 MS.gene054707:CDS
GCAGCTTCCATGGCTTCTAC+AGG 0.387857 5.3:+32730403 None:intergenic
CCTAGTGATTGCTTGGTAAT+CGG 0.388642 5.3:+32730594 None:intergenic
GGAGAGGTTTGAGAAGTACT+TGG 0.389397 5.3:-32731118 MS.gene054707:CDS
GCCATGGAAGCTGCCATCGC+TGG 0.399741 5.3:-32730394 MS.gene054707:CDS
ATCGACTAAGACATCGTTAG+TGG 0.402645 5.3:+32732193 None:intergenic
GGATTTGATTCCTTACAATA+GGG 0.403530 5.3:-32731193 MS.gene054707:CDS
GAAGGTGTTTGATCGCATAT+TGG 0.405938 5.3:-32730719 MS.gene054707:CDS
GGAGGCGCATTATGCTTATA+GGG 0.411872 5.3:-32731301 MS.gene054707:CDS
CTTTCTGAGTGGATGGCACC+GGG 0.421088 5.3:+32730497 None:intergenic
GTTTATTGGTTCTAATCAAT+GGG 0.421188 5.3:-32731214 MS.gene054707:CDS
GGTTTGAGCGGTGGTGTTAG+TGG 0.421910 5.3:+32732226 None:intergenic
GAGTGGAGGGAAAGGAAATC+TGG 0.423211 5.3:-32731762 MS.gene054707:CDS
AAATCAAAATCAAAATCAAA+AGG 0.423267 5.3:+32731711 None:intergenic
GTTCGTGAGGGATATGGATT+GGG 0.423720 5.3:-32730761 MS.gene054707:CDS
CACAACTAGTTTCTGATACT+CGG 0.428515 5.3:+32730369 None:intergenic
CCGTTGACTCTTCCTTTGAT+CGG 0.435307 5.3:-32731389 MS.gene054707:CDS
TCATGAAGAAACTTGAAATT+GGG 0.436482 5.3:+32731513 None:intergenic
GCCAGCGATGGCAGCTTCCA+TGG 0.443302 5.3:+32730393 None:intergenic
GGTGGCCAACTTCAATTCTC+TGG 0.445519 5.3:-32732165 MS.gene054707:CDS
GATTTGAGAGTGTAGATCTC+AGG 0.445904 5.3:+32732266 None:intergenic
CTTCGTGGTGTTCGTGGTAC+CGG 0.445975 5.3:-32731957 MS.gene054707:CDS
TTCTCTGTCAACCCCATCGA+TGG 0.448198 5.3:+32732128 None:intergenic
GGGAAGGAATATTGGTAGCT+AGG 0.448466 5.3:+32731871 None:intergenic
ATTCCTTCCCTCGCTGACTT+TGG 0.449943 5.3:-32731858 MS.gene054707:CDS
ACTAGGAAGTATAGCGAGAA+AGG 0.454566 5.3:-32730577 MS.gene054707:CDS
GAGCATGTCTGGGACTCCTA+TGG 0.455047 5.3:-32730914 MS.gene054707:CDS
ACAACTAGTTTCTGATACTC+GGG 0.457651 5.3:+32730370 None:intergenic
CGATGTCTTAGTCGATCAAA+TGG 0.462259 5.3:-32732186 MS.gene054707:CDS
GCGGTGGTGTTAGTGGTGGT+AGG 0.463470 5.3:+32732233 None:intergenic
TGTAACCTTCGTGGTGTTCG+TGG 0.465043 5.3:-32731963 MS.gene054707:CDS
AATCAAAATCAAAATCAAAA+GGG 0.469877 5.3:+32731712 None:intergenic
CCTTTCTGAGTGGATGGCAC+CGG 0.470831 5.3:+32730496 None:intergenic
ATAGGGTTCGTGATCGTTTG+AGG 0.471872 5.3:-32731284 MS.gene054707:CDS
TCACCAACGTTTCTCTCTAC+TGG 0.473200 5.3:-32732101 MS.gene054707:CDS
TATACTTCCTAGTGATTGCT+TGG 0.477986 5.3:+32730587 None:intergenic
TGCCAAGAGGATCTTCCCTT+GGG 0.479061 5.3:-32731343 MS.gene054707:CDS
TTGCCAAGAGGATCTTCCCT+TGG 0.480374 5.3:-32731344 MS.gene054707:CDS
AAAGGAGTGGCGCTGGTAAG+TGG 0.484002 5.3:-32730478 MS.gene054707:CDS
AGGAGGATCAGATGATTAAG+AGG 0.485373 5.3:-32730672 MS.gene054707:CDS
AGAAGGAAGAGTGGAGGGAA+AGG 0.487853 5.3:-32731770 MS.gene054707:CDS
TACTTGGAGGATGTGAAGGC+AGG 0.488941 5.3:-32731102 MS.gene054707:CDS
ATCCCTCACGAACTGTGTCT+TGG 0.489557 5.3:+32730771 None:intergenic
GTAATAACCTTCCCTTTCCA+TGG 0.491644 5.3:+32730844 None:intergenic
ATGTGTCTGGGAGCATGTCT+GGG 0.495012 5.3:-32730924 MS.gene054707:CDS
GTATCAGAAACTAGTTGTGC+TGG 0.495109 5.3:-32730365 MS.gene054707:CDS
ATCGTTAGTGGTTGTTGTGG+AGG 0.501932 5.3:+32732205 None:intergenic
CCTCAGCTTCATGTGATTCA+GGG 0.504209 5.3:-32730808 MS.gene054707:CDS
AGTTCGTGAGGGATATGGAT+TGG 0.508853 5.3:-32730762 MS.gene054707:CDS
GGATGGAGATGGTGGAGAAG+TGG 0.510289 5.3:-32731022 MS.gene054707:CDS
GGAATATGAAGGTGTGGAGG+AGG 0.511393 5.3:-32731319 MS.gene054707:CDS
ACAGAAGCCACCCTATTGTA+AGG 0.513119 5.3:+32731183 None:intergenic
CTGATACTCGGGGCCAGCGA+TGG 0.513732 5.3:+32730381 None:intergenic
TCAAGCGTCTGCAAACTCTT+GGG 0.514244 5.3:-32730620 MS.gene054707:CDS
GGAAGGAATATTGGTAGCTA+GGG 0.519851 5.3:+32731872 None:intergenic
CTCCCAAGGGAAGATCCTCT+TGG 0.520806 5.3:+32731341 None:intergenic
CAGCTTCCATGGCTTCTACA+GGG 0.521562 5.3:+32730404 None:intergenic
GAGGTTTGAGAAGTACTTGG+AGG 0.521875 5.3:-32731115 MS.gene054707:CDS
AGCAACCAAAACCCATCGAT+GGG 0.523034 5.3:-32732140 MS.gene054707:CDS
CACTCAGAAAGGAGTGGCGC+TGG 0.524221 5.3:-32730485 MS.gene054707:CDS
ATATTGGATGTGGCTGTCAA+TGG 0.529469 5.3:-32730703 MS.gene054707:CDS
AAGTATAGCGAGAAAGGGTA+TGG 0.530567 5.3:-32730571 MS.gene054707:CDS
AGTGTCTCAGAAGGAGTGTC+GGG 0.531841 5.3:+32732044 None:intergenic
GCCACTCCTTTCTGAGTGGA+TGG 0.533051 5.3:+32730490 None:intergenic
TTGCAGTGTGTGATGTGTCT+GGG 0.534674 5.3:-32730936 MS.gene054707:CDS
ACCGGTAAGTCTGACAAAGA+AGG 0.537460 5.3:-32731939 MS.gene054707:CDS
CTTCAGAACCTTCGAGAAGA+CGG 0.540737 5.3:+32731805 None:intergenic
GACATCGTTAGTGGTTGTTG+TGG 0.541165 5.3:+32732202 None:intergenic
AGAGGTGGCAGCGAGAGATA+AGG 0.547672 5.3:-32731619 MS.gene054707:CDS
GACTCCTATGGAGGTGTCTG+TGG 0.550102 5.3:-32730902 MS.gene054707:CDS
TCGAGAGACTCAAACTAGCT+TGG 0.552185 5.3:-32732019 MS.gene054707:CDS
AAACTCGTCTGTAACCTTCG+TGG 0.553124 5.3:-32731972 MS.gene054707:CDS
GATCTTCGTGTTCCGTGACA+TGG 0.553679 5.3:-32730650 MS.gene054707:CDS
TGAGTGAGGAACCATGGAAA+GGG 0.555980 5.3:-32730855 MS.gene054707:CDS
AACCTTCGAGAAGACGGTAG+AGG 0.559476 5.3:+32731811 None:intergenic
TATTGGATGTGGCTGTCAAT+GGG 0.560043 5.3:-32730702 MS.gene054707:CDS
GCTTGCCAGAGAATTGAAGT+TGG 0.563939 5.3:+32732160 None:intergenic
CCGATTACCAAGCAATCACT+AGG 0.565104 5.3:-32730594 MS.gene054707:CDS
CTAGGAAGTATAGCGAGAAA+GGG 0.566439 5.3:-32730576 MS.gene054707:CDS
ATGAGATTATAGGGTCTTTG+GGG 0.568462 5.3:-32731044 MS.gene054707:CDS
TCTCTGTCAACCCCATCGAT+GGG 0.569197 5.3:+32732129 None:intergenic
AAGCAACCAAAACCCATCGA+TGG 0.569203 5.3:-32732141 MS.gene054707:CDS
GAAGACGGTAGAGGATCTCA+GGG 0.570432 5.3:+32731820 None:intergenic
ATCCTCTACCGTCTTCTCGA+AGG 0.571604 5.3:-32731813 MS.gene054707:CDS
CCGGTGCCATCCACTCAGAA+AGG 0.571959 5.3:-32730496 MS.gene054707:CDS
CCCTGAATCACATGAAGCTG+AGG 0.572263 5.3:+32730808 None:intergenic
ACACCTTCATATTCCTCCCA+AGG 0.573102 5.3:+32731327 None:intergenic
GTTTGATCGCATATTGGATG+TGG 0.574432 5.3:-32730713 MS.gene054707:CDS
AAGGAGTGGCGCTGGTAAGT+GGG 0.577776 5.3:-32730477 MS.gene054707:CDS
GGGAAGACTACTATTGCTGC+TGG 0.579975 5.3:-32731081 MS.gene054707:CDS
CGGTGGTGTTAGTGGTGGTA+GGG 0.581199 5.3:+32732234 None:intergenic
TGGAGGTGTCTGTGGCATTG+GGG 0.582479 5.3:-32730894 MS.gene054707:CDS
GAGAGACTCGAAGGCCACCC+CGG 0.584902 5.3:-32730515 MS.gene054707:CDS
TAACCAAAGTCAGCGAGGGA+AGG 0.585924 5.3:+32731855 None:intergenic
AATGCCACAGACACCTCCAT+AGG 0.586105 5.3:+32730898 None:intergenic
AGGGAAGATCCTCTTGGCAA+TGG 0.586959 5.3:+32731347 None:intergenic
TTCCCTTGGGAGGAATATGA+AGG 0.588989 5.3:-32731330 MS.gene054707:CDS
GAGTGTCTCAGAAGGAGTGT+CGG 0.590014 5.3:+32732043 None:intergenic
CATGTCTGGGACTCCTATGG+AGG 0.590641 5.3:-32730911 MS.gene054707:CDS
ATCAAAATCAAAATCAAAAG+GGG 0.592135 5.3:+32731713 None:intergenic
TGAAGTTCGCAAAACGCAGA+AGG 0.593546 5.3:-32731787 MS.gene054707:CDS
TTGAGTGAGGAACCATGGAA+AGG 0.593836 5.3:-32730856 MS.gene054707:CDS
CCGGTAAGTCTGACAAAGAA+GGG 0.594633 5.3:-32731938 MS.gene054707:CDS
TATAAGCCCTGTAGAAGCCA+TGG 0.596604 5.3:-32730410 MS.gene054707:CDS
CTCAGCTTCATGTGATTCAG+GGG 0.597407 5.3:-32730807 MS.gene054707:CDS
TTGAGAGTGTAGATCTCAGG+TGG 0.598107 5.3:+32732269 None:intergenic
TCAAAGGAAGAGTCAACGGA+AGG 0.598171 5.3:+32731393 None:intergenic
TTTGATTCCTTACAATAGGG+TGG 0.598708 5.3:-32731190 MS.gene054707:CDS
ACATTGTTCTTGGATAATGA+AGG 0.599605 5.3:-32730436 MS.gene054707:CDS
TTGGAATCTGAGAGACTCGA+AGG 0.600799 5.3:-32730524 MS.gene054707:CDS
TTAGAACCAATAAACACCTC+AGG 0.602489 5.3:+32731222 None:intergenic
GAAGTACTTGGAGGATGTGA+AGG 0.604063 5.3:-32731106 MS.gene054707:CDS
ACTTGGAGGATGTGAAGGCA+GGG 0.604217 5.3:-32731101 MS.gene054707:CDS
TGTGTTGGTGCCGTTGAGGA+AGG 0.604572 5.3:-32731256 MS.gene054707:CDS
CTCTCGACGAGTGTCTCAGA+AGG 0.605004 5.3:+32732035 None:intergenic
CAAGAGGATCTTCCCTTGGG+AGG 0.606223 5.3:-32731340 MS.gene054707:CDS
CCGAATTGAGTGAGGAACCA+TGG 0.607067 5.3:-32730861 MS.gene054707:CDS
GAGAAGTGGCTGAGTTGCAG+TGG 0.607162 5.3:-32731008 MS.gene054707:CDS
AACGCAGAAGGAAGAGTGGA+GGG 0.607854 5.3:-32731775 MS.gene054707:CDS
CCGATCAAAGGAAGAGTCAA+CGG 0.608539 5.3:+32731389 None:intergenic
TGGAAGAAGAAATCAAGACA+TGG 0.609649 5.3:+32732074 None:intergenic
GGTTGTTGTGGAGGTTTGAG+CGG 0.610193 5.3:+32732214 None:intergenic
AGGTGGGCCAACGAGAGTGA+CGG 0.610407 5.3:+32732286 None:intergenic
CAGCGCCACTCCTTTCTGAG+TGG 0.610539 5.3:+32730486 None:intergenic
CACCTTCATATTCCTCCCAA+GGG 0.611175 5.3:+32731328 None:intergenic
ATGGCCGCCGTCACTCTCGT+TGG 0.612849 5.3:-32732293 MS.gene054707:CDS
TGTTGTGGAGGTTTGAGCGG+TGG 0.615236 5.3:+32732217 None:intergenic
AGATTCCAAAAGACTATCTG+AGG 0.615433 5.3:+32730538 None:intergenic
CTGAGTGGATGGCACCGGGG+TGG 0.616153 5.3:+32730501 None:intergenic
AAACGCAGAAGGAAGAGTGG+AGG 0.617951 5.3:-32731776 MS.gene054707:CDS
TAACAGCGTTGACCGATCAA+AGG 0.617986 5.3:+32731377 None:intergenic
GGCTGTCAATGGGAATCTCA+AGG 0.621591 5.3:-32730692 MS.gene054707:CDS
GGTGCCGTTGAGGAAGGTGT+TGG 0.622773 5.3:-32731250 MS.gene054707:CDS
TTGAGCGGTGGTGTTAGTGG+TGG 0.625189 5.3:+32732229 None:intergenic
AGACTTCATCAAGACTGAAG+AGG 0.626501 5.3:-32731637 MS.gene054707:CDS
AATTCCAACACCTTCCTCAA+CGG 0.628014 5.3:+32731246 None:intergenic
CTTCATCAAGACTGAAGAGG+TGG 0.631113 5.3:-32731634 MS.gene054707:CDS
TTGGGAGGAATATGAAGGTG+TGG 0.633554 5.3:-32731325 MS.gene054707:CDS
GTCCAAGACACAGTTCGTGA+GGG 0.639286 5.3:-32730773 MS.gene054707:CDS
AAAGACCCTATAATCTCATG+AGG 0.640006 5.3:+32731048 None:intergenic
CTTGATCAAACTCCATGTCA+CGG 0.640660 5.3:+32730638 None:intergenic
TTCGTGAGGGATATGGATTG+GGG 0.640869 5.3:-32730760 MS.gene054707:CDS
GAAGTAACCAAAGTCAGCGA+GGG 0.641029 5.3:+32731851 None:intergenic
AGTCCAAGACACAGTTCGTG+AGG 0.643681 5.3:-32730774 MS.gene054707:CDS
GGAGGAATATGAAGGTGTGG+AGG 0.643817 5.3:-32731322 MS.gene054707:CDS
TCGTTTGAGGAAAGATGTGT+TGG 0.647723 5.3:-32731271 MS.gene054707:CDS
GCCATCCACTCAGAAAGGAG+TGG 0.648100 5.3:-32730491 MS.gene054707:CDS
TGAGGAACCATGGAAAGGGA+AGG 0.648812 5.3:-32730851 MS.gene054707:CDS
GCAAAACGCAGAAGGAAGAG+TGG 0.649001 5.3:-32731779 MS.gene054707:CDS
TTCATGAAACCATAGAGCAG+CGG 0.650549 5.3:+32731908 None:intergenic
GGAAGAAGAAATCAAGACAT+GGG 0.651030 5.3:+32732075 None:intergenic
AAGGAGTGTCGGGAACAACA+TGG 0.651711 5.3:+32732054 None:intergenic
AAGATGTGTTGGTGCCGTTG+AGG 0.652976 5.3:-32731260 MS.gene054707:CDS
CAAAGGAAGAGTCAACGGAA+GGG 0.653236 5.3:+32731394 None:intergenic
GTTGGTGTCCGAATTGAGTG+AGG 0.654872 5.3:-32730869 MS.gene054707:CDS
TGGGCCAACGAGAGTGACGG+CGG 0.663912 5.3:+32732289 None:intergenic
GATGAACACTGATTTCCAGA+AGG 0.669878 5.3:-32730737 MS.gene054707:CDS
TGAGATTATAGGGTCTTTGG+GGG 0.673539 5.3:-32731043 MS.gene054707:CDS
TGTCTTAGTCGATCAAATGG+TGG 0.681041 5.3:-32732183 MS.gene054707:CDS
TCAGCTTCATGTGATTCAGG+GGG 0.686603 5.3:-32730806 MS.gene054707:CDS
TGAAGTAACCAAAGTCAGCG+AGG 0.688387 5.3:+32731850 None:intergenic
TGAGAGTGTAGATCTCAGGT+GGG 0.694001 5.3:+32732270 None:intergenic
TTTCTGAGTGGATGGCACCG+GGG 0.698885 5.3:+32730498 None:intergenic
CAACTAGTTTCTGATACTCG+GGG 0.701259 5.3:+32730371 None:intergenic
CGGTACCACGAACACCACGA+AGG 0.704527 5.3:+32731958 None:intergenic
GAAGGTGTTGGAATTGCCTG+AGG 0.709397 5.3:-32731238 MS.gene054707:CDS
GCAACCAAAACCCATCGATG+GGG 0.709625 5.3:-32732139 MS.gene054707:CDS
TATGTGAGACCATTGCCAAG+AGG 0.711412 5.3:-32731356 MS.gene054707:CDS
TTACCAGTAGAGAGAAACGT+TGG 0.717379 5.3:+32732098 None:intergenic
TCGTGAGGGATATGGATTGG+GGG 0.737160 5.3:-32730759 MS.gene054707:CDS
TGTCAATGGGAATCTCAAGG+AGG 0.758838 5.3:-32730689 MS.gene054707:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAAAATCAAAATCAAA+AGG + chr5.3:32730945-32730964 None:intergenic 15.0%
!! AATCAAAATCAAAATCAAAA+GGG + chr5.3:32730944-32730963 None:intergenic 15.0%
!!! TTGATTTTGATTTTGATTTT+AGG - chr5.3:32730946-32730965 MS.gene054707:CDS 15.0%
!! ATCAAAATCAAAATCAAAAG+GGG + chr5.3:32730943-32730962 None:intergenic 20.0%
!!! TATTGATGAAGATTTTCTTT+TGG + chr5.3:32730919-32730938 None:intergenic 20.0%
! ATCATGAAGAAACTTGAAAT+TGG + chr5.3:32731144-32731163 None:intergenic 25.0%
! TCATGAAGAAACTTGAAATT+GGG + chr5.3:32731143-32731162 None:intergenic 25.0%
!!! GTTTATTGGTTCTAATCAAT+GGG - chr5.3:32731439-32731458 MS.gene054707:CDS 25.0%
!!! TGTAGCAATGAAGTTTTATA+AGG - chr5.3:32731490-32731509 MS.gene054707:CDS 25.0%
!!! TGTTTATTGGTTCTAATCAA+TGG - chr5.3:32731438-32731457 MS.gene054707:CDS 25.0%
!!! TTTGATTTTGATTTTAGGAG+AGG - chr5.3:32730951-32730970 MS.gene054707:CDS 25.0%
ACATTGTTCTTGGATAATGA+AGG - chr5.3:32732217-32732236 MS.gene054707:CDS 30.0%
GGATTTGATTCCTTACAATA+GGG - chr5.3:32731460-32731479 MS.gene054707:CDS 30.0%
!! GTTGATGATTTGCTTAAGAA+AGG - chr5.3:32731677-32731696 MS.gene054707:CDS 30.0%
!! TTTTGCTGATTGTTTGAAGA+AGG - chr5.3:32731178-32731197 MS.gene054707:CDS 30.0%
!!! ATCTCGAGTTTTTGAAATCT+GGG - chr5.3:32731201-32731220 MS.gene054707:CDS 30.0%
!!! CTTTCTTGTTTTTGTTGTTG+TGG + chr5.3:32730998-32731017 None:intergenic 30.0%
!!! GAAGTTTTTGAAGCATGATA+AGG - chr5.3:32731514-32731533 MS.gene054707:CDS 30.0%
AAAGACCCTATAATCTCATG+AGG + chr5.3:32731608-32731627 None:intergenic 35.0%
AAATCAGTCTTGCTGCTAAA+TGG - chr5.3:32731234-32731253 MS.gene054707:CDS 35.0%
AGATTCCAAAAGACTATCTG+AGG + chr5.3:32732118-32732137 None:intergenic 35.0%
ATGAGATTATAGGGTCTTTG+GGG - chr5.3:32731609-32731628 MS.gene054707:CDS 35.0%
CATGAGATTATAGGGTCTTT+GGG - chr5.3:32731608-32731627 MS.gene054707:CDS 35.0%
GGAAGAAGAAATCAAGACAT+GGG + chr5.3:32730581-32730600 None:intergenic 35.0%
GGGATTTGATTCCTTACAAT+AGG - chr5.3:32731459-32731478 MS.gene054707:CDS 35.0%
TATACTTCCTAGTGATTGCT+TGG + chr5.3:32732069-32732088 None:intergenic 35.0%
TCATGAGATTATAGGGTCTT+TGG - chr5.3:32731607-32731626 MS.gene054707:CDS 35.0%
TGCTTCCTCATGAGATTATA+GGG - chr5.3:32731600-32731619 MS.gene054707:CDS 35.0%
TGGAAGAAGAAATCAAGACA+TGG + chr5.3:32730582-32730601 None:intergenic 35.0%
TTAGAACCAATAAACACCTC+AGG + chr5.3:32731434-32731453 None:intergenic 35.0%
TTGCTTCCTCATGAGATTAT+AGG - chr5.3:32731599-32731618 MS.gene054707:CDS 35.0%
TTTGATTCCTTACAATAGGG+TGG - chr5.3:32731463-32731482 MS.gene054707:CDS 35.0%
! AAGGTTACAGACGAGTTTTA+GGG + chr5.3:32730679-32730698 None:intergenic 35.0%
! ACAACTAGTTTCTGATACTC+GGG + chr5.3:32732286-32732305 None:intergenic 35.0%
! CACAACTAGTTTCTGATACT+CGG + chr5.3:32732287-32732306 None:intergenic 35.0%
!! ATATTGGTAGCTAGGGTTTT+AGG + chr5.3:32730777-32730796 None:intergenic 35.0%
!! TATTGGTAGCTAGGGTTTTA+GGG + chr5.3:32730776-32730795 None:intergenic 35.0%
!!! GATCTCGAGTTTTTGAAATC+TGG - chr5.3:32731200-32731219 MS.gene054707:CDS 35.0%
!!! TTTTGAAGCATGATAAGGAG+AGG - chr5.3:32731519-32731538 MS.gene054707:CDS 35.0%
AAGTATAGCGAGAAAGGGTA+TGG - chr5.3:32732082-32732101 MS.gene054707:CDS 40.0%
AATTCCAACACCTTCCTCAA+CGG + chr5.3:32731410-32731429 None:intergenic 40.0%
AGACTTCATCAAGACTGAAG+AGG - chr5.3:32731016-32731035 MS.gene054707:CDS 40.0%
AGGAGGATCAGATGATTAAG+AGG - chr5.3:32731981-32732000 MS.gene054707:CDS 40.0%
ATATGCGATCAAACACCTTC+TGG + chr5.3:32731934-32731953 None:intergenic 40.0%
ATATTGGATGTGGCTGTCAA+TGG - chr5.3:32731950-32731969 MS.gene054707:CDS 40.0%
ATCGACTAAGACATCGTTAG+TGG + chr5.3:32730463-32730482 None:intergenic 40.0%
CGATGTCTTAGTCGATCAAA+TGG - chr5.3:32730467-32730486 MS.gene054707:CDS 40.0%
CTTGATCAAACTCCATGTCA+CGG + chr5.3:32732018-32732037 None:intergenic 40.0%
GAATCTGCTGACATTGTTCT+TGG - chr5.3:32732207-32732226 MS.gene054707:CDS 40.0%
GTAATAACCTTCCCTTTCCA+TGG + chr5.3:32731812-32731831 None:intergenic 40.0%
GTATCAGAAACTAGTTGTGC+TGG - chr5.3:32732288-32732307 MS.gene054707:CDS 40.0%
GTTTGATCGCATATTGGATG+TGG - chr5.3:32731940-32731959 MS.gene054707:CDS 40.0%
TATTGGATGTGGCTGTCAAT+GGG - chr5.3:32731951-32731970 MS.gene054707:CDS 40.0%
TCGTTTGAGGAAAGATGTGT+TGG - chr5.3:32731382-32731401 MS.gene054707:CDS 40.0%
TGAGATTATAGGGTCTTTGG+GGG - chr5.3:32731610-32731629 MS.gene054707:CDS 40.0%
TGTCTTAGTCGATCAAATGG+TGG - chr5.3:32730470-32730489 MS.gene054707:CDS 40.0%
TTACCAGTAGAGAGAAACGT+TGG + chr5.3:32730558-32730577 None:intergenic 40.0%
TTCATGAAACCATAGAGCAG+CGG + chr5.3:32730748-32730767 None:intergenic 40.0%
! ACTAGGAAGTATAGCGAGAA+AGG - chr5.3:32732076-32732095 MS.gene054707:CDS 40.0%
! CAACTAGTTTCTGATACTCG+GGG + chr5.3:32732285-32732304 None:intergenic 40.0%
! CCTAGTGATTGCTTGGTAAT+CGG + chr5.3:32732062-32732081 None:intergenic 40.0%
! CTAGGAAGTATAGCGAGAAA+GGG - chr5.3:32732077-32732096 MS.gene054707:CDS 40.0%
! GAAGGTTACAGACGAGTTTT+AGG + chr5.3:32730680-32730699 None:intergenic 40.0%
! GAATTGCCTGAGGTGTTTAT+TGG - chr5.3:32731425-32731444 MS.gene054707:CDS 40.0%
! GATTTGAGAGTGTAGATCTC+AGG + chr5.3:32730390-32730409 None:intergenic 40.0%
! GGAAGGAATATTGGTAGCTA+GGG + chr5.3:32730784-32730803 None:intergenic 40.0%
!! AGCAGCAAGACTGATTTTTG+TGG + chr5.3:32731231-32731250 None:intergenic 40.0%
!! GAAGGTGTTTGATCGCATAT+TGG - chr5.3:32731934-32731953 MS.gene054707:CDS 40.0%
!! GATGAACACTGATTTCCAGA+AGG - chr5.3:32731916-32731935 MS.gene054707:CDS 40.0%
!! GCAGCAAGACTGATTTTTGT+GGG + chr5.3:32731230-32731249 None:intergenic 40.0%
!!! ACGTTTTGAAGCAAGAGAAG+AGG - chr5.3:32731075-32731094 MS.gene054707:CDS 40.0%
AAACTCGTCTGTAACCTTCG+TGG - chr5.3:32730681-32730700 MS.gene054707:CDS 45.0%
AAGCAACCAAAACCCATCGA+TGG - chr5.3:32730512-32730531 MS.gene054707:CDS 45.0%
ACACCTTCATATTCCTCCCA+AGG + chr5.3:32731329-32731348 None:intergenic 45.0%
ACAGAAGCCACCCTATTGTA+AGG + chr5.3:32731473-32731492 None:intergenic 45.0%
ACCGGTAAGTCTGACAAAGA+AGG - chr5.3:32730714-32730733 MS.gene054707:CDS 45.0%
AGCAACCAAAACCCATCGAT+GGG - chr5.3:32730513-32730532 MS.gene054707:CDS 45.0%
AGTTCGTGAGGGATATGGAT+TGG - chr5.3:32731891-32731910 MS.gene054707:CDS 45.0%
ATAGGGTTCGTGATCGTTTG+AGG - chr5.3:32731369-32731388 MS.gene054707:CDS 45.0%
ATCAAGCGTCTGCAAACTCT+TGG - chr5.3:32732032-32732051 MS.gene054707:CDS 45.0%
ATCGTTAGTGGTTGTTGTGG+AGG + chr5.3:32730451-32730470 None:intergenic 45.0%
CAAAGGAAGAGTCAACGGAA+GGG + chr5.3:32731262-32731281 None:intergenic 45.0%
CACCTTCATATTCCTCCCAA+GGG + chr5.3:32731328-32731347 None:intergenic 45.0%
CCATGGTTCCTCACTCAATT+CGG + chr5.3:32731795-32731814 None:intergenic 45.0%
CCCTTCTTTGTCAGACTTAC+CGG + chr5.3:32730718-32730737 None:intergenic 45.0%
CCGATCAAAGGAAGAGTCAA+CGG + chr5.3:32731267-32731286 None:intergenic 45.0%
CCGATTACCAAGCAATCACT+AGG - chr5.3:32732059-32732078 MS.gene054707:CDS 45.0%
CCGGTAAGTCTGACAAAGAA+GGG - chr5.3:32730715-32730734 MS.gene054707:CDS 45.0%
CCTCAGCTTCATGTGATTCA+GGG - chr5.3:32731845-32731864 MS.gene054707:CDS 45.0%
CTCAGCTTCATGTGATTCAG+GGG - chr5.3:32731846-32731865 MS.gene054707:CDS 45.0%
CTTCAGAACCTTCGAGAAGA+CGG + chr5.3:32730851-32730870 None:intergenic 45.0%
CTTCATCAAGACTGAAGAGG+TGG - chr5.3:32731019-32731038 MS.gene054707:CDS 45.0%
GAAGTAACCAAAGTCAGCGA+GGG + chr5.3:32730805-32730824 None:intergenic 45.0%
GACATCGTTAGTGGTTGTTG+TGG + chr5.3:32730454-32730473 None:intergenic 45.0%
GCTTGCCAGAGAATTGAAGT+TGG + chr5.3:32730496-32730515 None:intergenic 45.0%
GTTCGTGAGGGATATGGATT+GGG - chr5.3:32731892-32731911 MS.gene054707:CDS 45.0%
TATAAGCCCTGTAGAAGCCA+TGG - chr5.3:32732243-32732262 MS.gene054707:CDS 45.0%
TATGTGAGACCATTGCCAAG+AGG - chr5.3:32731297-32731316 MS.gene054707:CDS 45.0%
TCAAAGGAAGAGTCAACGGA+AGG + chr5.3:32731263-32731282 None:intergenic 45.0%
TCAAGCGTCTGCAAACTCTT+GGG - chr5.3:32732033-32732052 MS.gene054707:CDS 45.0%
TCACCAACGTTTCTCTCTAC+TGG - chr5.3:32730552-32730571 MS.gene054707:CDS 45.0%
TCAGCTTCATGTGATTCAGG+GGG - chr5.3:32731847-32731866 MS.gene054707:CDS 45.0%
TCGAGAGACTCAAACTAGCT+TGG - chr5.3:32730634-32730653 MS.gene054707:CDS 45.0%
TGAAGTAACCAAAGTCAGCG+AGG + chr5.3:32730806-32730825 None:intergenic 45.0%
TGAAGTTCGCAAAACGCAGA+AGG - chr5.3:32730866-32730885 MS.gene054707:CDS 45.0%
TGAGTGAGGAACCATGGAAA+GGG - chr5.3:32731798-32731817 MS.gene054707:CDS 45.0%
TGTCAATGGGAATCTCAAGG+AGG - chr5.3:32731964-32731983 MS.gene054707:CDS 45.0%
TGTTAGTGGTGGTAGGGTTA+GGG + chr5.3:32730416-32730435 None:intergenic 45.0%
TTCCCTTGGGAGGAATATGA+AGG - chr5.3:32731323-32731342 MS.gene054707:CDS 45.0%
TTGAGTGAGGAACCATGGAA+AGG - chr5.3:32731797-32731816 MS.gene054707:CDS 45.0%
TTGCAGTGTGTGATGTGTCT+GGG - chr5.3:32731717-32731736 MS.gene054707:CDS 45.0%
TTGGAATCTGAGAGACTCGA+AGG - chr5.3:32732129-32732148 MS.gene054707:CDS 45.0%
TTGGGAGGAATATGAAGGTG+TGG - chr5.3:32731328-32731347 MS.gene054707:CDS 45.0%
! AGGAGGCGCATTATGCTTAT+AGG - chr5.3:32731351-32731370 MS.gene054707:CDS 45.0%
! ATTATAGGGTCTTTGGGGGA+TGG - chr5.3:32731614-32731633 MS.gene054707:CDS 45.0%
! CTGTGCCTCAGATAGTCTTT+TGG - chr5.3:32732110-32732129 MS.gene054707:CDS 45.0%
! GAAGTACTTGGAGGATGTGA+AGG - chr5.3:32731547-32731566 MS.gene054707:CDS 45.0%
! GGAGGCGCATTATGCTTATA+GGG - chr5.3:32731352-32731371 MS.gene054707:CDS 45.0%
! GGGAAGGAATATTGGTAGCT+AGG + chr5.3:32730785-32730804 None:intergenic 45.0%
! TGAGAGTGTAGATCTCAGGT+GGG + chr5.3:32730386-32730405 None:intergenic 45.0%
! TTCGTGAGGGATATGGATTG+GGG - chr5.3:32731893-32731912 MS.gene054707:CDS 45.0%
! TTGAGAGTGTAGATCTCAGG+TGG + chr5.3:32730387-32730406 None:intergenic 45.0%
!! CCGTTGACTCTTCCTTTGAT+CGG - chr5.3:32731264-32731283 MS.gene054707:CDS 45.0%
!! GAGGTTTGAGAAGTACTTGG+AGG - chr5.3:32731538-32731557 MS.gene054707:CDS 45.0%
!! GGAGAGGTTTGAGAAGTACT+TGG - chr5.3:32731535-32731554 MS.gene054707:CDS 45.0%
!! TAACAGCGTTGACCGATCAA+AGG + chr5.3:32731279-32731298 None:intergenic 45.0%
!! TAGGGTGGTGAGTGGATTTT+GGG + chr5.3:32730661-32730680 None:intergenic 45.0%
!! TTAGGGTGGTGAGTGGATTT+TGG + chr5.3:32730662-32730681 None:intergenic 45.0%
!!! GTTACAGACGAGTTTTAGGG+TGG + chr5.3:32730676-32730695 None:intergenic 45.0%
AAACGCAGAAGGAAGAGTGG+AGG - chr5.3:32730877-32730896 MS.gene054707:CDS 50.0%
AACCTTCGAGAAGACGGTAG+AGG + chr5.3:32730845-32730864 None:intergenic 50.0%
AACGCAGAAGGAAGAGTGGA+GGG - chr5.3:32730878-32730897 MS.gene054707:CDS 50.0%
AATGCCACAGACACCTCCAT+AGG + chr5.3:32731758-32731777 None:intergenic 50.0%
ACTTGGAGGATGTGAAGGCA+GGG - chr5.3:32731552-32731571 MS.gene054707:CDS 50.0%
AGAAGACGGTAGAGGATCTC+AGG + chr5.3:32730837-32730856 None:intergenic 50.0%
AGAAGGAAGAGTGGAGGGAA+AGG - chr5.3:32730883-32730902 MS.gene054707:CDS 50.0%
AGGGAAGATCCTCTTGGCAA+TGG + chr5.3:32731309-32731328 None:intergenic 50.0%
AGTCCAAGACACAGTTCGTG+AGG - chr5.3:32731879-32731898 MS.gene054707:CDS 50.0%
ATCCCTCACGAACTGTGTCT+TGG + chr5.3:32731885-32731904 None:intergenic 50.0%
ATCCTCTACCGTCTTCTCGA+AGG - chr5.3:32730840-32730859 MS.gene054707:CDS 50.0%
CAGCTTCCATGGCTTCTACA+GGG + chr5.3:32732252-32732271 None:intergenic 50.0%
CCCTGAATCACATGAAGCTG+AGG + chr5.3:32731848-32731867 None:intergenic 50.0%
CCGAATTGAGTGAGGAACCA+TGG - chr5.3:32731792-32731811 MS.gene054707:CDS 50.0%
CTTGCAGTGTGTGATGTGTC+TGG - chr5.3:32731716-32731735 MS.gene054707:CDS 50.0%
GAAGACGGTAGAGGATCTCA+GGG + chr5.3:32730836-32730855 None:intergenic 50.0%
GACACAGTTCGTGAGGGATA+TGG - chr5.3:32731886-32731905 MS.gene054707:CDS 50.0%
GAGTGGAGGGAAAGGAAATC+TGG - chr5.3:32730891-32730910 MS.gene054707:CDS 50.0%
GATCTTCGTGTTCCGTGACA+TGG - chr5.3:32732003-32732022 MS.gene054707:CDS 50.0%
GCAAAACGCAGAAGGAAGAG+TGG - chr5.3:32730874-32730893 MS.gene054707:CDS 50.0%
GCAACCAAAACCCATCGATG+GGG - chr5.3:32730514-32730533 MS.gene054707:CDS 50.0%
GCCTCAGCTTCATGTGATTC+AGG - chr5.3:32731844-32731863 MS.gene054707:CDS 50.0%
GGCTGTCAATGGGAATCTCA+AGG - chr5.3:32731961-32731980 MS.gene054707:CDS 50.0%
GGGAAGACTACTATTGCTGC+TGG - chr5.3:32731572-32731591 MS.gene054707:CDS 50.0%
GGTGGCCAACTTCAATTCTC+TGG - chr5.3:32730488-32730507 MS.gene054707:CDS 50.0%
GGTTGTTGTGGAGGTTTGAG+CGG + chr5.3:32730442-32730461 None:intergenic 50.0%
GTCAGCGAGGGAAGGAATAT+TGG + chr5.3:32730793-32730812 None:intergenic 50.0%
GTCCAAGACACAGTTCGTGA+GGG - chr5.3:32731880-32731899 MS.gene054707:CDS 50.0%
GTGTTAGTGGTGGTAGGGTT+AGG + chr5.3:32730417-32730436 None:intergenic 50.0%
TAACCAAAGTCAGCGAGGGA+AGG + chr5.3:32730801-32730820 None:intergenic 50.0%
TACTTGGAGGATGTGAAGGC+AGG - chr5.3:32731551-32731570 MS.gene054707:CDS 50.0%
TCTCTGTCAACCCCATCGAT+GGG + chr5.3:32730527-32730546 None:intergenic 50.0%
TGAGGAACCATGGAAAGGGA+AGG - chr5.3:32731802-32731821 MS.gene054707:CDS 50.0%
TGCCAAGAGGATCTTCCCTT+GGG - chr5.3:32731310-32731329 MS.gene054707:CDS 50.0%
TGTAACCTTCGTGGTGTTCG+TGG - chr5.3:32730690-32730709 MS.gene054707:CDS 50.0%
TTCTCTGTCAACCCCATCGA+TGG + chr5.3:32730528-32730547 None:intergenic 50.0%
TTGCCAAGAGGATCTTCCCT+TGG - chr5.3:32731309-32731328 MS.gene054707:CDS 50.0%
! ATGTGTCTGGGAGCATGTCT+GGG - chr5.3:32731729-32731748 MS.gene054707:CDS 50.0%
! GAGTGTCTCAGAAGGAGTGT+CGG + chr5.3:32730613-32730632 None:intergenic 50.0%
! GGAATATGAAGGTGTGGAGG+AGG - chr5.3:32731334-32731353 MS.gene054707:CDS 50.0%
! GGAGGAATATGAAGGTGTGG+AGG - chr5.3:32731331-32731350 MS.gene054707:CDS 50.0%
! GTTGGTGTCCGAATTGAGTG+AGG - chr5.3:32731784-32731803 MS.gene054707:CDS 50.0%
!! AAGATGTGTTGGTGCCGTTG+AGG - chr5.3:32731393-32731412 MS.gene054707:CDS 50.0%
!! AAGGAGTGTCGGGAACAACA+TGG + chr5.3:32730602-32730621 None:intergenic 50.0%
!! AGTGTCTCAGAAGGAGTGTC+GGG + chr5.3:32730612-32730631 None:intergenic 50.0%
!! ATGGAGGTGTCTGTGGCATT+GGG - chr5.3:32731758-32731777 MS.gene054707:CDS 50.0%
!! ATTCCTTCCCTCGCTGACTT+TGG - chr5.3:32730795-32730814 MS.gene054707:CDS 50.0%
!! GAAGGTGTTGGAATTGCCTG+AGG - chr5.3:32731415-32731434 MS.gene054707:CDS 50.0%
!! TATGGAGGTGTCTGTGGCAT+TGG - chr5.3:32731757-32731776 MS.gene054707:CDS 50.0%
!! TCAACCCCATCGATGGGTTT+TGG + chr5.3:32730521-32730540 None:intergenic 50.0%
!! TCGTGAGGGATATGGATTGG+GGG - chr5.3:32731894-32731913 MS.gene054707:CDS 50.0%
!!! ACGAGTTTTAGGGTGGTGAG+TGG + chr5.3:32730669-32730688 None:intergenic 50.0%
AGAGGTGGCAGCGAGAGATA+AGG - chr5.3:32731034-32731053 MS.gene054707:CDS 55.0%
CAAGAGGATCTTCCCTTGGG+AGG - chr5.3:32731313-32731332 MS.gene054707:CDS 55.0%
CCTTTCTGAGTGGATGGCAC+CGG + chr5.3:32732160-32732179 None:intergenic 55.0%
CTCCCAAGGGAAGATCCTCT+TGG + chr5.3:32731315-32731334 None:intergenic 55.0%
CTCTCGACGAGTGTCTCAGA+AGG + chr5.3:32730621-32730640 None:intergenic 55.0%
CTTCGTGGTGTTCGTGGTAC+CGG - chr5.3:32730696-32730715 MS.gene054707:CDS 55.0%
CTTTCTGAGTGGATGGCACC+GGG + chr5.3:32732159-32732178 None:intergenic 55.0%
GAGAAGTGGCTGAGTTGCAG+TGG - chr5.3:32731645-32731664 MS.gene054707:CDS 55.0%
GCAGCTTCCATGGCTTCTAC+AGG + chr5.3:32732253-32732272 None:intergenic 55.0%
GCCACTCCTTTCTGAGTGGA+TGG + chr5.3:32732166-32732185 None:intergenic 55.0%
GCCATCCACTCAGAAAGGAG+TGG - chr5.3:32732162-32732181 MS.gene054707:CDS 55.0%
TGTTGTGGAGGTTTGAGCGG+TGG + chr5.3:32730439-32730458 None:intergenic 55.0%
TTTCTGAGTGGATGGCACCG+GGG + chr5.3:32732158-32732177 None:intergenic 55.0%
! CATGTCTGGGACTCCTATGG+AGG - chr5.3:32731742-32731761 MS.gene054707:CDS 55.0%
! CGGTGGTGTTAGTGGTGGTA+GGG + chr5.3:32730422-32730441 None:intergenic 55.0%
! GAGCATGTCTGGGACTCCTA+TGG - chr5.3:32731739-32731758 MS.gene054707:CDS 55.0%
! GATGTGTCTGGGAGCATGTC+TGG - chr5.3:32731728-32731747 MS.gene054707:CDS 55.0%
! GGTTTGAGCGGTGGTGTTAG+TGG + chr5.3:32730430-32730449 None:intergenic 55.0%
! GTCTGTGGCATTGGGGTTGT+TGG - chr5.3:32731766-32731785 MS.gene054707:CDS 55.0%
! TCTTTGGGGGATGGAGATGG+TGG - chr5.3:32731623-32731642 MS.gene054707:CDS 55.0%
! TTGAGCGGTGGTGTTAGTGG+TGG + chr5.3:32730427-32730446 None:intergenic 55.0%
!! AAAGGAGTGGCGCTGGTAAG+TGG - chr5.3:32732175-32732194 MS.gene054707:CDS 55.0%
!! AAGGAGTGGCGCTGGTAAGT+GGG - chr5.3:32732176-32732195 MS.gene054707:CDS 55.0%
!! GACTCCTATGGAGGTGTCTG+TGG - chr5.3:32731751-32731770 MS.gene054707:CDS 55.0%
!! GGATGGAGATGGTGGAGAAG+TGG - chr5.3:32731631-32731650 MS.gene054707:CDS 55.0%
!! TGGAGGTGTCTGTGGCATTG+GGG - chr5.3:32731759-32731778 MS.gene054707:CDS 55.0%
!! TGTGTTGGTGCCGTTGAGGA+AGG - chr5.3:32731397-32731416 MS.gene054707:CDS 55.0%
AGGTGGGCCAACGAGAGTGA+CGG + chr5.3:32730370-32730389 None:intergenic 60.0%
CACTCAGAAAGGAGTGGCGC+TGG - chr5.3:32732168-32732187 MS.gene054707:CDS 60.0%
CAGCGCCACTCCTTTCTGAG+TGG + chr5.3:32732170-32732189 None:intergenic 60.0%
CGGTACCACGAACACCACGA+AGG + chr5.3:32730698-32730717 None:intergenic 60.0%
GGTTCTACGCCGCTGCTCTA+TGG - chr5.3:32730736-32730755 MS.gene054707:CDS 60.0%
! GCGGTGGTGTTAGTGGTGGT+AGG + chr5.3:32730423-32730442 None:intergenic 60.0%
! GGGTCTTTGGGGGATGGAGA+TGG - chr5.3:32731620-32731639 MS.gene054707:CDS 60.0%
!! CCGGTGCCATCCACTCAGAA+AGG - chr5.3:32732157-32732176 MS.gene054707:CDS 60.0%
!! GGTGCCGTTGAGGAAGGTGT+TGG - chr5.3:32731403-32731422 MS.gene054707:CDS 60.0%
ATGGCCGCCGTCACTCTCGT+TGG - chr5.3:32730360-32730379 MS.gene054707:CDS 65.0%
CTGATACTCGGGGCCAGCGA+TGG + chr5.3:32732275-32732294 None:intergenic 65.0%
GAGAGACTCGAAGGCCACCC+CGG - chr5.3:32732138-32732157 MS.gene054707:CDS 65.0%
GCCAGCGATGGCAGCTTCCA+TGG + chr5.3:32732263-32732282 None:intergenic 65.0%
GCCATGGAAGCTGCCATCGC+TGG - chr5.3:32732259-32732278 MS.gene054707:CDS 65.0%
TGGGCCAACGAGAGTGACGG+CGG + chr5.3:32730367-32730386 None:intergenic 65.0%
! CTGAGTGGATGGCACCGGGG+TGG + chr5.3:32732155-32732174 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 32730360 32732315 32730360 ID=MS.gene054707
chr5.3 mRNA 32730360 32732315 32730360 ID=MS.gene054707.t1;Parent=MS.gene054707
chr5.3 exon 32730360 32732315 32730360 ID=MS.gene054707.t1.exon1;Parent=MS.gene054707.t1
chr5.3 CDS 32730360 32732315 32730360 ID=cds.MS.gene054707.t1;Parent=MS.gene054707.t1
Gene Sequence

>MS.gene054707

ATGGCCGCCGTCACTCTCGTTGGCCCACCTGAGATCTACACTCTCAAATCAAACCCTAACCCTACCACCACTAACACCACCGCTCAAACCTCCACAACAACCACTAACGATGTCTTAGTCGATCAAATGGTGGCCAACTTCAATTCTCTGGCAAGCAACCAAAACCCATCGATGGGGTTGACAGAGAACATGTCACCAACGTTTCTCTCTACTGGTAACCCATGTCTTGATTTCTTCTTCCATGTTGTTCCCGACACTCCTTCTGAGACACTCGTCGAGAGACTCAAACTAGCTTGGTCCCAAAATCCACTCACCACCCTAAAACTCGTCTGTAACCTTCGTGGTGTTCGTGGTACCGGTAAGTCTGACAAAGAAGGGTTCTACGCCGCTGCTCTATGGTTTCATGAAAATCACCCTAAAACCCTAGCTACCAATATTCCTTCCCTCGCTGACTTTGGTTACTTCAAAGATCTCCCTGAGATCCTCTACCGTCTTCTCGAAGGTTCTGAAGTTCGCAAAACGCAGAAGGAAGAGTGGAGGGAAAGGAAATCTGGATCCAAAAGAAAATCTTCATCAATAACCCCTTTTGATTTTGATTTTGATTTTAGGAGAGGAATAAATAAAAAACAGCGACACCACAACAACAAAAACAAGAAAGACTTCATCAAGACTGAAGAGGTGGCAGCGAGAGATAAGGCTCAGAAAGAAGCTGCTCACGTTTTGAAGCAAGAGAAGAGGATTGCATTAGCTAAGAAGCTTGTTGATCGTTACACTACTGATCCCAATTTCAAGTTTCTTCATGATTGTATCTCTGATCATTTTGCTGATTGTTTGAAGAAGGATCTCGAGTTTTTGAAATCTGGGTCGCCCACAAAAATCAGTCTTGCTGCTAAATGGTGCCCTTCCGTTGACTCTTCCTTTGATCGGTCAACGCTGTTATGTGAGACCATTGCCAAGAGGATCTTCCCTTGGGAGGAATATGAAGGTGTGGAGGAGGCGCATTATGCTTATAGGGTTCGTGATCGTTTGAGGAAAGATGTGTTGGTGCCGTTGAGGAAGGTGTTGGAATTGCCTGAGGTGTTTATTGGTTCTAATCAATGGGATTTGATTCCTTACAATAGGGTGGCTTCTGTAGCAATGAAGTTTTATAAGGAGAAGTTTTTGAAGCATGATAAGGAGAGGTTTGAGAAGTACTTGGAGGATGTGAAGGCAGGGAAGACTACTATTGCTGCTGGTGCTTTGCTTCCTCATGAGATTATAGGGTCTTTGGGGGATGGAGATGGTGGAGAAGTGGCTGAGTTGCAGTGGAAGAGAATTGTTGATGATTTGCTTAAGAAAGGAAAGATGAAAAATTGTCTTGCAGTGTGTGATGTGTCTGGGAGCATGTCTGGGACTCCTATGGAGGTGTCTGTGGCATTGGGGTTGTTGGTGTCCGAATTGAGTGAGGAACCATGGAAAGGGAAGGTTATTACTTTCAGTGCAGAGCCTCAGCTTCATGTGATTCAGGGGGATGATCTGAAGTCCAAGACACAGTTCGTGAGGGATATGGATTGGGGGATGAACACTGATTTCCAGAAGGTGTTTGATCGCATATTGGATGTGGCTGTCAATGGGAATCTCAAGGAGGATCAGATGATTAAGAGGATCTTCGTGTTCCGTGACATGGAGTTTGATCAAGCGTCTGCAAACTCTTGGGAGACCGATTACCAAGCAATCACTAGGAAGTATAGCGAGAAAGGGTATGGTTCAGCTGTGCCTCAGATAGTCTTTTGGAATCTGAGAGACTCGAAGGCCACCCCGGTGCCATCCACTCAGAAAGGAGTGGCGCTGGTAAGTGGGTTTTCAAAGAATCTGCTGACATTGTTCTTGGATAATGAAGGTGATATAAGCCCTGTAGAAGCCATGGAAGCTGCCATCGCTGGCCCCGAGTATCAGAAACTAGTTGTGCTGGATTGA

Protein sequence

>MS.gene054707.t1

MAAVTLVGPPEIYTLKSNPNPTTTNTTAQTSTTTTNDVLVDQMVANFNSLASNQNPSMGLTENMSPTFLSTGNPCLDFFFHVVPDTPSETLVERLKLAWSQNPLTTLKLVCNLRGVRGTGKSDKEGFYAAALWFHENHPKTLATNIPSLADFGYFKDLPEILYRLLEGSEVRKTQKEEWRERKSGSKRKSSSITPFDFDFDFRRGINKKQRHHNNKNKKDFIKTEEVAARDKAQKEAAHVLKQEKRIALAKKLVDRYTTDPNFKFLHDCISDHFADCLKKDLEFLKSGSPTKISLAAKWCPSVDSSFDRSTLLCETIAKRIFPWEEYEGVEEAHYAYRVRDRLRKDVLVPLRKVLELPEVFIGSNQWDLIPYNRVASVAMKFYKEKFLKHDKERFEKYLEDVKAGKTTIAAGALLPHEIIGSLGDGDGGEVAELQWKRIVDDLLKKGKMKNCLAVCDVSGSMSGTPMEVSVALGLLVSELSEEPWKGKVITFSAEPQLHVIQGDDLKSKTQFVRDMDWGMNTDFQKVFDRILDVAVNGNLKEDQMIKRIFVFRDMEFDQASANSWETDYQAITRKYSEKGYGSAVPQIVFWNLRDSKATPVPSTQKGVALVSGFSKNLLTLFLDNEGDISPVEAMEAAIAGPEYQKLVVLD