Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90885.t1 | XP_003592832.1 | 87.4 | 437 | 45 | 7 | 3 | 435 | 4 | 434 | 1.00E-202 | 716.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90885.t1 | G7IAZ7 | 87.4 | 437 | 45 | 7 | 3 | 435 | 4 | 434 | 7.2e-203 | 716.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene90885 | 0.815097 | 1.10E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene90885 | 0.816051 | 6.75E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene90885 | 0.80608 | 9.78E-50 | -1.69E-46 |
| MS.gene049865 | MS.gene90885 | 0.802973 | 4.35E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene90885 | 0.80102 | 1.10E-48 | -1.69E-46 |
| MS.gene050904 | MS.gene90885 | 0.828404 | 9.16E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene90885 | 0.81442 | 1.55E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene90885 | 0.836965 | 6.87E-57 | -1.69E-46 |
| MS.gene052503 | MS.gene90885 | 0.808267 | 3.37E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene90885 | 0.810241 | 1.27E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene90885 | 0.812967 | 3.25E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene90885 | 0.828914 | 6.90E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene90885 | 0.80161 | 8.30E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene90885 | 0.804263 | 2.35E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene90885 | 0.810286 | 1.24E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene90885 | 0.813219 | 2.86E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene90885 | 0.834394 | 3.07E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene90885 | 0.80117 | 1.02E-48 | -1.69E-46 |
| MS.gene059023 | MS.gene90885 | 0.81958 | 1.08E-52 | -1.69E-46 |
| MS.gene05912 | MS.gene90885 | 0.826908 | 2.10E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene90885 | 0.836909 | 7.10E-57 | -1.69E-46 |
| MS.gene059837 | MS.gene90885 | 0.80958 | 1.76E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene90885 | 0.820152 | 7.98E-53 | -1.69E-46 |
| MS.gene060187 | MS.gene90885 | -0.82657 | 2.52E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene90885 | -0.800565 | 1.36E-48 | -1.69E-46 |
| MS.gene060703 | MS.gene90885 | 0.813982 | 1.94E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene90885 | 0.812108 | 5.00E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene90885 | 0.825167 | 5.43E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene90885 | 0.800224 | 1.59E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90885.t1 | MTR_1g116540 | 88.864 | 440 | 38 | 9 | 1 | 435 | 1 | 434 | 0.0 | 755 |
| MS.gene90885.t1 | MTR_1g116540 | 85.714 | 448 | 45 | 10 | 1 | 435 | 1 | 442 | 0.0 | 731 |
| MS.gene90885.t1 | MTR_1g116540 | 88.263 | 426 | 39 | 9 | 1 | 421 | 1 | 420 | 0.0 | 720 |
| MS.gene90885.t1 | MTR_1g116540 | 85.023 | 434 | 46 | 10 | 1 | 421 | 1 | 428 | 0.0 | 696 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90885.t1 | AT2G43235 | 50.857 | 350 | 158 | 5 | 76 | 420 | 96 | 436 | 2.16e-113 | 340 |
Find 115 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACTTCAGTTCATATTAA+TGG | 0.156695 | 1.1:+82078516 | MS.gene90885:CDS |
| CGTCAATTATGCAGAAATTC+TGG | 0.263143 | 1.1:+82078289 | MS.gene90885:CDS |
| CGACTAACCATCTCCATTTC+AGG | 0.280124 | 1.1:-82079910 | None:intergenic |
| AGAGGTGGTGGTGCTGTGAA+TGG | 0.296250 | 1.1:-82077139 | None:intergenic |
| TATTGTTTGAATTGGTTTCT+AGG | 0.296767 | 1.1:+82077010 | MS.gene90885:CDS |
| TGTATTCATCTTGTTCAGTT+AGG | 0.309416 | 1.1:-82077284 | None:intergenic |
| AAGCACCTTATGTTTCTCTT+TGG | 0.310733 | 1.1:+82079967 | MS.gene90885:CDS |
| TGAAACGAATTGACGAATAT+TGG | 0.311467 | 1.1:-82076842 | None:intergenic |
| CTACAATAAGGGTATTATTA+TGG | 0.313025 | 1.1:+82077062 | MS.gene90885:CDS |
| AAACGCATCTACCTACAATA+AGG | 0.333004 | 1.1:+82077050 | MS.gene90885:CDS |
| GTGATGGTGGTGGTAGTAGT+AGG | 0.342276 | 1.1:-82076757 | None:intergenic |
| CCTTCCACCTTGCACTTCAT+AGG | 0.346159 | 1.1:+82076943 | MS.gene90885:CDS |
| CTGTTGAACCTACAACTATT+CGG | 0.355323 | 1.1:+82078323 | MS.gene90885:CDS |
| GGCAAACATGTTGATGCTTT+AGG | 0.356797 | 1.1:+82079141 | MS.gene90885:CDS |
| GATTCTCAACAATTCCTTGC+TGG | 0.359006 | 1.1:+82078543 | MS.gene90885:CDS |
| TGTTATGGTCAAGAGTGAAT+AGG | 0.360148 | 1.1:-82076897 | None:intergenic |
| GTTATGGTCAAGAGTGAATA+GGG | 0.363866 | 1.1:-82076896 | None:intergenic |
| ATTAATAGTTGGCCACCATT+TGG | 0.367825 | 1.1:-82077232 | None:intergenic |
| GAGGTGGTGGTGCTGTGAAT+GGG | 0.368704 | 1.1:-82077138 | None:intergenic |
| TTCAAAGACCGCTTAATTGA+CGG | 0.375232 | 1.1:-82077165 | None:intergenic |
| GATAAGCATGGTTGTGGAAA+TGG | 0.383399 | 1.1:-82076655 | None:intergenic |
| TTTGAGGGTATTGTTTGAAT+TGG | 0.385299 | 1.1:+82077002 | MS.gene90885:CDS |
| TGTCTCCTTGCAGCCTGAAA+TGG | 0.390978 | 1.1:+82079897 | MS.gene90885:intron |
| TTAATAGTTGGCCACCATTT+GGG | 0.399245 | 1.1:-82077231 | None:intergenic |
| CATAATAATACCCTTATTGT+AGG | 0.403671 | 1.1:-82077061 | None:intergenic |
| ATTTCCTCCCGAGGAATCTT+CGG | 0.417407 | 1.1:+82079197 | MS.gene90885:CDS |
| GCATTGGGATTATTAATAGT+TGG | 0.418090 | 1.1:-82077243 | None:intergenic |
| CTCAAAGGAAATTGCCCAAA+TGG | 0.421635 | 1.1:+82077217 | MS.gene90885:CDS |
| TGCAAGAGAAGCTCTTGGTT+TGG | 0.423356 | 1.1:+82080020 | MS.gene90885:CDS |
| ATCGCGGTATGCCTCTTTGC+CGG | 0.429399 | 1.1:-82076866 | None:intergenic |
| TGTTGAACCTACAACTATTC+GGG | 0.435983 | 1.1:+82078324 | MS.gene90885:CDS |
| ATTCTCAACAATTCCTTGCT+GGG | 0.439822 | 1.1:+82078544 | MS.gene90885:CDS |
| TGAAATGGAGATGGTTAGTC+GGG | 0.443445 | 1.1:+82079912 | MS.gene90885:CDS |
| AGGTGGTGGTGCTGTGAATG+GGG | 0.448259 | 1.1:-82077137 | None:intergenic |
| TTTGAGTTTATTGTGGCGTT+TGG | 0.448751 | 1.1:-82076725 | None:intergenic |
| ATATCAAAAGCATTGGCATT+GGG | 0.459121 | 1.1:-82077258 | None:intergenic |
| GGTGGAAAAGAGGTGGTTGT+TGG | 0.463264 | 1.1:+82077105 | MS.gene90885:CDS |
| AACGCATCTACCTACAATAA+GGG | 0.465536 | 1.1:+82077051 | MS.gene90885:CDS |
| ATTCGTCAATTCGTTTCATC+CGG | 0.474810 | 1.1:+82076847 | MS.gene90885:CDS |
| GGTGGTGGTGCTGTGAATGG+GGG | 0.474937 | 1.1:-82077136 | None:intergenic |
| CAAAGATATGCCTTCTTCTA+CGG | 0.476956 | 1.1:+82079172 | MS.gene90885:CDS |
| GACTAACTTGAATGATATCA+TGG | 0.480760 | 1.1:-82077801 | None:intergenic |
| TATGTTGTCTTCAAGTTGAC+CGG | 0.481031 | 1.1:-82080782 | None:intergenic |
| TTATTATGGTGCGGAGAGAC+AGG | 0.482055 | 1.1:+82077076 | MS.gene90885:CDS |
| CAAAACAGAAAAGGCAATGA+TGG | 0.486059 | 1.1:-82076983 | None:intergenic |
| AAGGAGTCCCGAATAGTTGT+AGG | 0.489624 | 1.1:-82078331 | None:intergenic |
| GCTGGGTTTGCTGAAAACAT+TGG | 0.494387 | 1.1:+82078561 | MS.gene90885:CDS |
| AGCAATTATCGACAGTAGAA+TGG | 0.497896 | 1.1:+82077759 | MS.gene90885:intron |
| GGAAGAAGCGGAGACGAGGC+GGG | 0.504022 | 1.1:-82076677 | None:intergenic |
| CAGAGAGTTTGAGTTTATTG+TGG | 0.507204 | 1.1:-82076732 | None:intergenic |
| AATTGACGGCGCAGAGGTGG+TGG | 0.508350 | 1.1:-82077151 | None:intergenic |
| TTGACGAATATTGGAATCAA+AGG | 0.510004 | 1.1:-82076833 | None:intergenic |
| TTCGAGCTTGTGTTCAGAGA+AGG | 0.512806 | 1.1:-82076782 | None:intergenic |
| CATATCAAAAGCATTGGCAT+TGG | 0.512854 | 1.1:-82077259 | None:intergenic |
| CAATACCCTCAAAACAGAAA+AGG | 0.514129 | 1.1:-82076992 | None:intergenic |
| GGAACAGACCGAAGATTCCT+CGG | 0.515504 | 1.1:-82079205 | None:intergenic |
| GTGGTGGTGCTGTGAATGGG+GGG | 0.518589 | 1.1:-82077135 | None:intergenic |
| TTCAGAGAAGGTGGTGATGG+TGG | 0.525379 | 1.1:-82076770 | None:intergenic |
| CTGAACAAGATGAATACAAG+AGG | 0.525744 | 1.1:+82077289 | MS.gene90885:CDS |
| AGGCGGGATAAGCATGGTTG+TGG | 0.526418 | 1.1:-82076661 | None:intergenic |
| TGATGGTGGTGGTAGTAGTA+GGG | 0.530138 | 1.1:-82076756 | None:intergenic |
| CAGGAGTCTCGGTGGAAAAG+AGG | 0.530256 | 1.1:+82077095 | MS.gene90885:CDS |
| CGAATATTGGAATCAAAGGA+AGG | 0.534213 | 1.1:-82076829 | None:intergenic |
| ATTAACTGATGCTCGATACA+AGG | 0.536295 | 1.1:-82078350 | None:intergenic |
| GGGATTGCAAGAGAAGCTCT+TGG | 0.537168 | 1.1:+82080015 | MS.gene90885:CDS |
| TGGTTTCTAGGTTTGCGTCA+TGG | 0.542864 | 1.1:+82077022 | MS.gene90885:CDS |
| CATTCTCAACATTATTGTAC+CGG | 0.549375 | 1.1:+82080763 | MS.gene90885:CDS |
| TATTGTGGCGTTTGGTGCGG+CGG | 0.549812 | 1.1:-82076717 | None:intergenic |
| AGAGAAGGTGGTGATGGTGG+TGG | 0.551976 | 1.1:-82076767 | None:intergenic |
| TTTGCAGTGAGGACAGTCAC+GGG | 0.552218 | 1.1:+82079995 | MS.gene90885:CDS |
| ATAAGGAAATTGTGTCTCAA+AGG | 0.558092 | 1.1:+82077202 | MS.gene90885:CDS |
| TAGGTCCATATCAAAAGCAT+TGG | 0.559057 | 1.1:-82077265 | None:intergenic |
| GCGGCGACTGCGACGTACAA+AGG | 0.562134 | 1.1:-82076698 | None:intergenic |
| CTGAAATGGAGATGGTTAGT+CGG | 0.564106 | 1.1:+82079911 | MS.gene90885:CDS |
| TGAACTGAAGTAGAGTAAGT+TGG | 0.565051 | 1.1:-82078507 | None:intergenic |
| CAAAAGACAAGAGCGTGTGC+GGG | 0.565606 | 1.1:-82078631 | None:intergenic |
| CAAAGGAAGAAGCGGAGACG+AGG | 0.566667 | 1.1:-82076681 | None:intergenic |
| GTGTTCAGAGAAGGTGGTGA+TGG | 0.568282 | 1.1:-82076773 | None:intergenic |
| TTCAGTTCATATTAATGGCG+AGG | 0.571469 | 1.1:+82078521 | MS.gene90885:CDS |
| GATGCTTACAGACTCGTTCG+AGG | 0.571898 | 1.1:+82077312 | MS.gene90885:CDS |
| GCAAAAGACAAGAGCGTGTG+CGG | 0.572608 | 1.1:-82078632 | None:intergenic |
| CTTAATTGACGGCGCAGAGG+TGG | 0.584478 | 1.1:-82077154 | None:intergenic |
| AACTTGAATGATATCATGGT+CGG | 0.586857 | 1.1:-82077797 | None:intergenic |
| AGGAAGAAGCGGAGACGAGG+CGG | 0.588432 | 1.1:-82076678 | None:intergenic |
| GAGCTTGTGTTCAGAGAAGG+TGG | 0.588582 | 1.1:-82076779 | None:intergenic |
| GAGGAAATATCCGTAGAAGA+AGG | 0.589817 | 1.1:-82079182 | None:intergenic |
| CTTGCAGCCTGAAATGGAGA+TGG | 0.589877 | 1.1:+82079903 | MS.gene90885:intron |
| CTTTACCAAAGAGAAACATA+AGG | 0.591688 | 1.1:-82079972 | None:intergenic |
| GTGCGGAGAGACAGGAGTCT+CGG | 0.603273 | 1.1:+82077084 | MS.gene90885:CDS |
| TTATAGGCATTGGAAATGCA+AGG | 0.604747 | 1.1:+82079120 | MS.gene90885:intron |
| CCTATGAAGTGCAAGGTGGA+AGG | 0.605754 | 1.1:-82076943 | None:intergenic |
| GAACAGACCGAAGATTCCTC+GGG | 0.606284 | 1.1:-82079204 | None:intergenic |
| GAAGATTGTGAGGTCTATGA+CGG | 0.607214 | 1.1:-82076806 | None:intergenic |
| GTTTGCAGTGAGGACAGTCA+CGG | 0.610114 | 1.1:+82079994 | MS.gene90885:CDS |
| AGCTGCAGACACAATTGTTG+CGG | 0.612752 | 1.1:-82078601 | None:intergenic |
| ATTCGTTTCATCCGGCAAAG+AGG | 0.619371 | 1.1:+82076855 | MS.gene90885:CDS |
| GAATATTGGAATCAAAGGAA+GGG | 0.626660 | 1.1:-82076828 | None:intergenic |
| AAAGGAAATTGCCCAAATGG+TGG | 0.626680 | 1.1:+82077220 | MS.gene90885:CDS |
| TCTACGGATATTTCCTCCCG+AGG | 0.628715 | 1.1:+82079188 | MS.gene90885:CDS |
| CCGCTTAATTGACGGCGCAG+AGG | 0.630008 | 1.1:-82077157 | None:intergenic |
| CAAAGGAAGGGAAGATTGTG+AGG | 0.632587 | 1.1:-82076816 | None:intergenic |
| GAGACGAGGCGGGATAAGCA+TGG | 0.633362 | 1.1:-82076667 | None:intergenic |
| TGAAGTTCCTATGAAGTGCA+AGG | 0.638935 | 1.1:-82076950 | None:intergenic |
| CCTCTGCGCCGTCAATTAAG+CGG | 0.643562 | 1.1:+82077157 | MS.gene90885:CDS |
| TGAACAAGATGAATACAAGA+GGG | 0.644744 | 1.1:+82077290 | MS.gene90885:CDS |
| GCGACGTACAAAGGAAGAAG+CGG | 0.648097 | 1.1:-82076689 | None:intergenic |
| GTTTATTGTGGCGTTTGGTG+CGG | 0.654882 | 1.1:-82076720 | None:intergenic |
| GAGTCTCGGTGGAAAAGAGG+TGG | 0.656446 | 1.1:+82077098 | MS.gene90885:CDS |
| CTTTGGTAAAGTTTGCAGTG+AGG | 0.666887 | 1.1:+82079984 | MS.gene90885:CDS |
| CGGAGAGACAGGAGTCTCGG+TGG | 0.667945 | 1.1:+82077087 | MS.gene90885:CDS |
| ATAAGGGTATTATTATGGTG+CGG | 0.682812 | 1.1:+82077067 | MS.gene90885:CDS |
| CAGACCGAAGATTCCTCGGG+AGG | 0.694458 | 1.1:-82079201 | None:intergenic |
| TGAATAGGGTCTGTAAATCG+CGG | 0.700229 | 1.1:-82076882 | None:intergenic |
| AGTTCCTATGAAGTGCAAGG+TGG | 0.710148 | 1.1:-82076947 | None:intergenic |
| GAAATGGAGATGGTTAGTCG+GGG | 0.713332 | 1.1:+82079913 | MS.gene90885:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATTAAAAATATCTAAAA+TGG | - | chr1.1:82079437-82079456 | None:intergenic | 10.0% |
| !! | CAATTAGTATATTTATTAAA+AGG | - | chr1.1:82078051-82078070 | None:intergenic | 10.0% |
| !! | GAAGAATAATAATAATAATA+AGG | + | chr1.1:82077185-82077204 | MS.gene90885:CDS | 10.0% |
| !!! | AAATCATTTTCTATAATAAA+TGG | + | chr1.1:82078211-82078230 | MS.gene90885:intron | 10.0% |
| !!! | CTTTTAATAAATATACTAAT+TGG | + | chr1.1:82078049-82078068 | MS.gene90885:intron | 10.0% |
| !! | AAATATTCATACAAAAAAAG+TGG | - | chr1.1:82079271-82079290 | None:intergenic | 15.0% |
| !! | AATATTCATACAAAAAAAGT+GGG | - | chr1.1:82079270-82079289 | None:intergenic | 15.0% |
| !! | TATTTGCAAATTATTGTTTA+AGG | - | chr1.1:82079229-82079248 | None:intergenic | 15.0% |
| !! | TTAAATATGAACAAATTTCA+AGG | + | chr1.1:82078870-82078889 | MS.gene90885:intron | 15.0% |
| !! | TTATCCTTTATTATTAACAA+CGG | + | chr1.1:82079355-82079374 | MS.gene90885:intron | 15.0% |
| !!! | TATTAAAAGGAATTAAGTTT+TGG | - | chr1.1:82078038-82078057 | None:intergenic | 15.0% |
| !!! | TTTTTGGTTTTTTCAATTAT+AGG | + | chr1.1:82079104-82079123 | MS.gene90885:intron | 15.0% |
| !! | AAAAATTCAAACATCAAAGA+AGG | - | chr1.1:82080703-82080722 | None:intergenic | 20.0% |
| !! | AATAATAAAGGATAACTATG+AGG | - | chr1.1:82079350-82079369 | None:intergenic | 20.0% |
| !! | AATACTCCATTAAAATTCAT+GGG | + | chr1.1:82079081-82079100 | MS.gene90885:intron | 20.0% |
| !! | ACAACATTTAAGAAAGATTT+AGG | - | chr1.1:82078830-82078849 | None:intergenic | 20.0% |
| !! | ATAAATAAAATCATGATCGT+TGG | - | chr1.1:82080524-82080543 | None:intergenic | 20.0% |
| !! | TAAATAAAATCATGATCGTT+GGG | - | chr1.1:82080523-82080542 | None:intergenic | 20.0% |
| !! | TAATTCTTTATGCATAAATG+AGG | + | chr1.1:82079498-82079517 | MS.gene90885:intron | 20.0% |
| !! | TTACTCTTAATCTTATTATC+TGG | + | chr1.1:82078672-82078691 | MS.gene90885:intron | 20.0% |
| !! | TTCAATAGCTAATTAATCTA+AGG | - | chr1.1:82077851-82077870 | None:intergenic | 20.0% |
| !!! | AAAGAAAACGTTTGAAATTT+CGG | + | chr1.1:82079635-82079654 | MS.gene90885:intron | 20.0% |
| !!! | ACTATTAAGGTTTTTATGAA+GGG | + | chr1.1:82080267-82080286 | MS.gene90885:intron | 20.0% |
| !!! | GTTATAATTTTGATGTTCAT+GGG | + | chr1.1:82080492-82080511 | MS.gene90885:intron | 20.0% |
| !!! | TACTATTAAGGTTTTTATGA+AGG | + | chr1.1:82080266-82080285 | MS.gene90885:intron | 20.0% |
| !!! | TGTTATAATTTTGATGTTCA+TGG | + | chr1.1:82080491-82080510 | MS.gene90885:intron | 20.0% |
| ! | AAACTTGACCATTTAAGTAA+TGG | - | chr1.1:82080409-82080428 | None:intergenic | 25.0% |
| ! | AACTCCGTTGTTAATAATAA+AGG | - | chr1.1:82079362-82079381 | None:intergenic | 25.0% |
| ! | AATTGAAAGATAATTGTAGC+TGG | + | chr1.1:82080109-82080128 | MS.gene90885:intron | 25.0% |
| ! | AATTGAGAAACTTTAATGAG+TGG | - | chr1.1:82079577-82079596 | None:intergenic | 25.0% |
| ! | ACTCAAATGAAAGAATTAGA+TGG | + | chr1.1:82078913-82078932 | MS.gene90885:intron | 25.0% |
| ! | ATGAATGAATGAATGAATGA+AGG | - | chr1.1:82077358-82077377 | None:intergenic | 25.0% |
| ! | ATTGCTATACATGTTTGAAA+TGG | + | chr1.1:82079746-82079765 | MS.gene90885:intron | 25.0% |
| ! | CATAATAATACCCTTATTGT+AGG | - | chr1.1:82077064-82077083 | None:intergenic | 25.0% |
| ! | CTCAAATGAAAGAATTAGAT+GGG | + | chr1.1:82078914-82078933 | MS.gene90885:intron | 25.0% |
| ! | CTCTCTAATTGTACTTATTT+GGG | + | chr1.1:82079873-82079892 | MS.gene90885:intron | 25.0% |
| ! | GAATACTCCATTAAAATTCA+TGG | + | chr1.1:82079080-82079099 | MS.gene90885:intron | 25.0% |
| ! | GAGGATTAGATTAAAGAATT+GGG | - | chr1.1:82080726-82080745 | None:intergenic | 25.0% |
| ! | GTAAAAATGCTTTAGTACAA+TGG | + | chr1.1:82080560-82080579 | MS.gene90885:intron | 25.0% |
| ! | TAACATCTAAGAGAGTAAAT+TGG | - | chr1.1:82077480-82077499 | None:intergenic | 25.0% |
| ! | TAAGGATGAAGTAAATGAAT+GGG | - | chr1.1:82077833-82077852 | None:intergenic | 25.0% |
| ! | TAGATGTGATGATACTATTA+AGG | + | chr1.1:82080254-82080273 | MS.gene90885:intron | 25.0% |
| ! | TATAGAGAACAAAACACATT+GGG | + | chr1.1:82079687-82079706 | MS.gene90885:intron | 25.0% |
| ! | TCTACTTCAGTTCATATTAA+TGG | + | chr1.1:82078516-82078535 | MS.gene90885:CDS | 25.0% |
| ! | TCTCTAATTGTACTTATTTG+GGG | + | chr1.1:82079874-82079893 | MS.gene90885:intron | 25.0% |
| ! | TGAAAATTTCTCATGTTAGT+TGG | - | chr1.1:82077503-82077522 | None:intergenic | 25.0% |
| ! | TGAATGAATGAATGAATGAA+GGG | - | chr1.1:82077357-82077376 | None:intergenic | 25.0% |
| !! | AAATGATGACTCTTTTGTTA+TGG | - | chr1.1:82076915-82076934 | None:intergenic | 25.0% |
| !! | AAGAAAACGTTTGAAATTTC+GGG | + | chr1.1:82079636-82079655 | MS.gene90885:intron | 25.0% |
| !! | ATGTGGAAATTTTCTTTTTC+AGG | - | chr1.1:82080234-82080253 | None:intergenic | 25.0% |
| !! | CAAAAACCCATGAATTTTAA+TGG | - | chr1.1:82079090-82079109 | None:intergenic | 25.0% |
| !! | CAAGGTTATATTTTCTATGA+TGG | + | chr1.1:82078888-82078907 | MS.gene90885:intron | 25.0% |
| !! | CATTAAAATTCATGGGTTTT+TGG | + | chr1.1:82079088-82079107 | MS.gene90885:intron | 25.0% |
| !! | TAAGTTGCAAGTTGAATTAA+AGG | - | chr1.1:82077725-82077744 | None:intergenic | 25.0% |
| !! | TATTGTTTGAATTGGTTTCT+AGG | + | chr1.1:82077010-82077029 | MS.gene90885:CDS | 25.0% |
| !!! | ATAAGCATTAGATGTTGTTT+TGG | + | chr1.1:82079782-82079801 | MS.gene90885:intron | 25.0% |
| !!! | CTACAATAAGGGTATTATTA+TGG | + | chr1.1:82077062-82077081 | MS.gene90885:CDS | 25.0% |
| !!! | GTTTTTTCAATTATAGGCAT+TGG | + | chr1.1:82079110-82079129 | MS.gene90885:intron | 25.0% |
| AAATCATAAATCAGCAGACA+AGG | - | chr1.1:82079837-82079856 | None:intergenic | 30.0% | |
| AACTTGAATGATATCATGGT+CGG | - | chr1.1:82077800-82077819 | None:intergenic | 30.0% | |
| AAGGATGAAGTAAATGAATG+GGG | - | chr1.1:82077832-82077851 | None:intergenic | 30.0% | |
| AATGAGGAGTAAATACTTTC+TGG | + | chr1.1:82079514-82079533 | MS.gene90885:intron | 30.0% | |
| ACATCTAATGCTTATCTCTA+TGG | - | chr1.1:82079777-82079796 | None:intergenic | 30.0% | |
| ATAAGGAAATTGTGTCTCAA+AGG | + | chr1.1:82077202-82077221 | MS.gene90885:CDS | 30.0% | |
| ATGAGGAGTAAATACTTTCT+GGG | + | chr1.1:82079515-82079534 | MS.gene90885:intron | 30.0% | |
| CAATTTAGAGAGCTTACAAT+TGG | - | chr1.1:82078957-82078976 | None:intergenic | 30.0% | |
| CATTCTCAACATTATTGTAC+CGG | + | chr1.1:82080763-82080782 | MS.gene90885:CDS | 30.0% | |
| CTAAGGATGAAGTAAATGAA+TGG | - | chr1.1:82077834-82077853 | None:intergenic | 30.0% | |
| CTTCCTAGAAAAAGAGTAAT+CGG | - | chr1.1:82079042-82079061 | None:intergenic | 30.0% | |
| CTTGTCTTGTCTTGTATTAT+AGG | + | chr1.1:82077653-82077672 | MS.gene90885:intron | 30.0% | |
| CTTTACCAAAGAGAAACATA+AGG | - | chr1.1:82079975-82079994 | None:intergenic | 30.0% | |
| GAATATTGGAATCAAAGGAA+GGG | - | chr1.1:82076831-82076850 | None:intergenic | 30.0% | |
| GACTAACTTGAATGATATCA+TGG | - | chr1.1:82077804-82077823 | None:intergenic | 30.0% | |
| GCATTGGGATTATTAATAGT+TGG | - | chr1.1:82077246-82077265 | None:intergenic | 30.0% | |
| GCTCTCTAATTGTACTTATT+TGG | + | chr1.1:82079872-82079891 | MS.gene90885:intron | 30.0% | |
| GGAGGATTAGATTAAAGAAT+TGG | - | chr1.1:82080727-82080746 | None:intergenic | 30.0% | |
| GGTTTGAACCATTACTTAAA+TGG | + | chr1.1:82080398-82080417 | MS.gene90885:intron | 30.0% | |
| GTAAAGAGCAATTCTTTACA+TGG | + | chr1.1:82080582-82080601 | MS.gene90885:intron | 30.0% | |
| GTATAGAGAACAAAACACAT+TGG | + | chr1.1:82079686-82079705 | MS.gene90885:intron | 30.0% | |
| GTTCTTGGCTATTAGATATT+TGG | + | chr1.1:82079397-82079416 | MS.gene90885:intron | 30.0% | |
| TAAGCTCTCTAAATTGATCA+GGG | + | chr1.1:82078961-82078980 | MS.gene90885:intron | 30.0% | |
| TAGTATCATCACATCTAATG+TGG | - | chr1.1:82080251-82080270 | None:intergenic | 30.0% | |
| TCAACATCAAAGTAAACATG+AGG | - | chr1.1:82077415-82077434 | None:intergenic | 30.0% | |
| TCTATATCTACACAAAACCA+CGG | - | chr1.1:82078092-82078111 | None:intergenic | 30.0% | |
| TGAAACGAATTGACGAATAT+TGG | - | chr1.1:82076845-82076864 | None:intergenic | 30.0% | |
| TGAACAAGATGAATACAAGA+GGG | + | chr1.1:82077290-82077309 | MS.gene90885:CDS | 30.0% | |
| TGTAACTACTAGCATTCTAA+AGG | + | chr1.1:82078739-82078758 | MS.gene90885:intron | 30.0% | |
| TGTATTCATCTTGTTCAGTT+AGG | - | chr1.1:82077287-82077306 | None:intergenic | 30.0% | |
| TGTTCTCTTTATTCCTTACT+CGG | + | chr1.1:82079297-82079316 | MS.gene90885:intron | 30.0% | |
| TTAATGAGTGGTTATACAGA+TGG | - | chr1.1:82079565-82079584 | None:intergenic | 30.0% | |
| TTGACGAATATTGGAATCAA+AGG | - | chr1.1:82076836-82076855 | None:intergenic | 30.0% | |
| ! | AGAAAACGTTTGAAATTTCG+GGG | + | chr1.1:82079637-82079656 | MS.gene90885:intron | 30.0% |
| ! | AGGCAGTTTATATTTTCACT+CGG | + | chr1.1:82078759-82078778 | MS.gene90885:intron | 30.0% |
| ! | CATTTAAGTTACACACTTTC+AGG | - | chr1.1:82079003-82079022 | None:intergenic | 30.0% |
| ! | TAATGATTTGTCTTTCACTC+CGG | + | chr1.1:82079450-82079469 | MS.gene90885:intron | 30.0% |
| ! | TTTTGTTCTCTATACTACAG+AGG | - | chr1.1:82079681-82079700 | None:intergenic | 30.0% |
| !! | AATCTTGTCTTTTAGCCTTT+GGG | + | chr1.1:82078696-82078715 | MS.gene90885:intron | 30.0% |
| !! | AGTTGTCTTGTGTTATTTCT+TGG | + | chr1.1:82080669-82080688 | MS.gene90885:intron | 30.0% |
| !! | ATAAGGGTATTATTATGGTG+CGG | + | chr1.1:82077067-82077086 | MS.gene90885:CDS | 30.0% |
| !! | ATACTATGAAGTTCTGAATG+AGG | + | chr1.1:82080375-82080394 | MS.gene90885:intron | 30.0% |
| !! | ATATCAAAAGCATTGGCATT+GGG | - | chr1.1:82077261-82077280 | None:intergenic | 30.0% |
| !! | ATTTTAATGGAGTATTCACG+TGG | - | chr1.1:82079077-82079096 | None:intergenic | 30.0% |
| !! | CTGAAAGAGTATTTGAACAT+TGG | + | chr1.1:82080344-82080363 | MS.gene90885:intron | 30.0% |
| !! | TAATCTTGTCTTTTAGCCTT+TGG | + | chr1.1:82078695-82078714 | MS.gene90885:intron | 30.0% |
| !! | TACTATGAAGTTCTGAATGA+GGG | + | chr1.1:82080376-82080395 | MS.gene90885:intron | 30.0% |
| !! | TTTGAGGGTATTGTTTGAAT+TGG | + | chr1.1:82077002-82077021 | MS.gene90885:CDS | 30.0% |
| !! | TTTTAATGGAGTATTCACGT+GGG | - | chr1.1:82079076-82079095 | None:intergenic | 30.0% |
| !!! | GGAAATTTTCTTTTTCAGGA+GGG | - | chr1.1:82080230-82080249 | None:intergenic | 30.0% |
| !!! | TACTGACGTGAAAGTTTTTT+TGG | + | chr1.1:82078247-82078266 | MS.gene90885:intron | 30.0% |
| !!! | TGGAAATTTTCTTTTTCAGG+AGG | - | chr1.1:82080231-82080250 | None:intergenic | 30.0% |
| AAACGCATCTACCTACAATA+AGG | + | chr1.1:82077050-82077069 | MS.gene90885:CDS | 35.0% | |
| AAATCCTATCATACCGAGTA+AGG | - | chr1.1:82079313-82079332 | None:intergenic | 35.0% | |
| AACGCATCTACCTACAATAA+GGG | + | chr1.1:82077051-82077070 | MS.gene90885:CDS | 35.0% | |
| AAGCACCTTATGTTTCTCTT+TGG | + | chr1.1:82079967-82079986 | MS.gene90885:CDS | 35.0% | |
| ACAATCTAGTAGAAACCCAA+AGG | - | chr1.1:82078714-82078733 | None:intergenic | 35.0% | |
| ACATGAGAGTTGAAAGTAAG+AGG | - | chr1.1:82077581-82077600 | None:intergenic | 35.0% | |
| ACCATTTATGTCAGTGTTCT+TGG | + | chr1.1:82079382-82079401 | MS.gene90885:intron | 35.0% | |
| ACGAGTGAATTTACGTTTAC+CGG | - | chr1.1:82079472-82079491 | None:intergenic | 35.0% | |
| AGAGTATAGTAAAGGACCAA+AGG | - | chr1.1:82077946-82077965 | None:intergenic | 35.0% | |
| AGCAATTATCGACAGTAGAA+TGG | + | chr1.1:82077759-82077778 | MS.gene90885:intron | 35.0% | |
| AGTGCAAGATCTGCAAAATA+GGG | - | chr1.1:82080060-82080079 | None:intergenic | 35.0% | |
| ATTAACTGATGCTCGATACA+AGG | - | chr1.1:82078353-82078372 | None:intergenic | 35.0% | |
| ATTAATAGTTGGCCACCATT+TGG | - | chr1.1:82077235-82077254 | None:intergenic | 35.0% | |
| ATTCGTCAATTCGTTTCATC+CGG | + | chr1.1:82076847-82076866 | MS.gene90885:CDS | 35.0% | |
| ATTCTACTGTCGATAATTGC+TGG | - | chr1.1:82077760-82077779 | None:intergenic | 35.0% | |
| ATTCTCAACAATTCCTTGCT+GGG | + | chr1.1:82078544-82078563 | MS.gene90885:CDS | 35.0% | |
| CAAAACAGAAAAGGCAATGA+TGG | - | chr1.1:82076986-82077005 | None:intergenic | 35.0% | |
| CAAAGATATGCCTTCTTCTA+CGG | + | chr1.1:82079172-82079191 | MS.gene90885:CDS | 35.0% | |
| CAATACCCTCAAAACAGAAA+AGG | - | chr1.1:82076995-82077014 | None:intergenic | 35.0% | |
| CAATCTTGACGATTTAAGCA+TGG | - | chr1.1:82080310-82080329 | None:intergenic | 35.0% | |
| CATCTAAGAGAGTAAATTGG+AGG | - | chr1.1:82077477-82077496 | None:intergenic | 35.0% | |
| CGAATATTGGAATCAAAGGA+AGG | - | chr1.1:82076832-82076851 | None:intergenic | 35.0% | |
| CGTCAATTATGCAGAAATTC+TGG | + | chr1.1:82078289-82078308 | MS.gene90885:CDS | 35.0% | |
| CTGAACAAGATGAATACAAG+AGG | + | chr1.1:82077289-82077308 | MS.gene90885:CDS | 35.0% | |
| CTGTTGAACCTACAACTATT+CGG | + | chr1.1:82078323-82078342 | MS.gene90885:CDS | 35.0% | |
| GAATGCGTCTACACAAATAA+AGG | - | chr1.1:82080748-82080767 | None:intergenic | 35.0% | |
| GAGTATAGTAAAGGACCAAA+GGG | - | chr1.1:82077945-82077964 | None:intergenic | 35.0% | |
| GTAAGCTCTCTAAATTGATC+AGG | + | chr1.1:82078960-82078979 | MS.gene90885:intron | 35.0% | |
| GTTATGGTCAAGAGTGAATA+GGG | - | chr1.1:82076899-82076918 | None:intergenic | 35.0% | |
| TAATGCTTATCTCTATGGAG+TGG | - | chr1.1:82079772-82079791 | None:intergenic | 35.0% | |
| TAGTGCAAGATCTGCAAAAT+AGG | - | chr1.1:82080061-82080080 | None:intergenic | 35.0% | |
| TATTCCTTACTCGGTATGAT+AGG | + | chr1.1:82079306-82079325 | MS.gene90885:intron | 35.0% | |
| TGAACTGAAGTAGAGTAAGT+TGG | - | chr1.1:82078510-82078529 | None:intergenic | 35.0% | |
| TGAGGAGTAAATACTTTCTG+GGG | + | chr1.1:82079516-82079535 | MS.gene90885:intron | 35.0% | |
| TGTTATGGTCAAGAGTGAAT+AGG | - | chr1.1:82076900-82076919 | None:intergenic | 35.0% | |
| TGTTGAACCTACAACTATTC+GGG | + | chr1.1:82078324-82078343 | MS.gene90885:CDS | 35.0% | |
| TTAATAGTTGGCCACCATTT+GGG | - | chr1.1:82077234-82077253 | None:intergenic | 35.0% | |
| TTACTCGGTATGATAGGATT+TGG | + | chr1.1:82079312-82079331 | MS.gene90885:intron | 35.0% | |
| TTCAAAGACCGCTTAATTGA+CGG | - | chr1.1:82077168-82077187 | None:intergenic | 35.0% | |
| TTCAGTTCATATTAATGGCG+AGG | + | chr1.1:82078521-82078540 | MS.gene90885:CDS | 35.0% | |
| ! | ATTTTCACTCGGAATACTGT+TGG | + | chr1.1:82078770-82078789 | MS.gene90885:intron | 35.0% |
| ! | CAATGCCAATGCTTTTGATA+TGG | + | chr1.1:82077260-82077279 | MS.gene90885:CDS | 35.0% |
| ! | CAGAGAGTTTGAGTTTATTG+TGG | - | chr1.1:82076735-82076754 | None:intergenic | 35.0% |
| ! | CTTTGATGTTGATTGAGTGA+AGG | + | chr1.1:82077423-82077442 | MS.gene90885:intron | 35.0% |
| ! | TAGGTCCATATCAAAAGCAT+TGG | - | chr1.1:82077268-82077287 | None:intergenic | 35.0% |
| ! | TCATTGCCTTTTCTGTTTTG+AGG | + | chr1.1:82076986-82077005 | MS.gene90885:CDS | 35.0% |
| ! | TTTCTGGGGAAATTTAGATG+AGG | + | chr1.1:82079530-82079549 | MS.gene90885:intron | 35.0% |
| ! | TTTGAGTTTATTGTGGCGTT+TGG | - | chr1.1:82076728-82076747 | None:intergenic | 35.0% |
| !! | ACTATGAAGTTCTGAATGAG+GGG | + | chr1.1:82080377-82080396 | MS.gene90885:intron | 35.0% |
| !! | CATATCAAAAGCATTGGCAT+TGG | - | chr1.1:82077262-82077281 | None:intergenic | 35.0% |
| !! | CATTGCCTTTTCTGTTTTGA+GGG | + | chr1.1:82076987-82077006 | MS.gene90885:CDS | 35.0% |
| !! | TATGTTGTCTTCAAGTTGAC+CGG | - | chr1.1:82080785-82080804 | None:intergenic | 35.0% |
| !! | TTATAGGCATTGGAAATGCA+AGG | + | chr1.1:82079120-82079139 | MS.gene90885:intron | 35.0% |
| !!! | AGATGTTGTTTTGGATGAGT+AGG | + | chr1.1:82079791-82079810 | MS.gene90885:intron | 35.0% |
| !!! | TTTTTCAGGAGGGTTAGTTA+CGG | - | chr1.1:82080220-82080239 | None:intergenic | 35.0% |
| AAAGGAAATTGCCCAAATGG+TGG | + | chr1.1:82077220-82077239 | MS.gene90885:CDS | 40.0% | |
| CCTAGAAAAAGAGTAATCGG+AGG | - | chr1.1:82079039-82079058 | None:intergenic | 40.0% | |
| CTCAAAGGAAATTGCCCAAA+TGG | + | chr1.1:82077217-82077236 | MS.gene90885:CDS | 40.0% | |
| CTGAAATGGAGATGGTTAGT+CGG | + | chr1.1:82079911-82079930 | MS.gene90885:CDS | 40.0% | |
| CTTTGGTAAAGTTTGCAGTG+AGG | + | chr1.1:82079984-82080003 | MS.gene90885:CDS | 40.0% | |
| GAAGATTGTGAGGTCTATGA+CGG | - | chr1.1:82076809-82076828 | None:intergenic | 40.0% | |
| GACAACTCACATGCAATCTT+TGG | - | chr1.1:82080656-82080675 | None:intergenic | 40.0% | |
| GAGGAAATATCCGTAGAAGA+AGG | - | chr1.1:82079185-82079204 | None:intergenic | 40.0% | |
| GATAAGCATGGTTGTGGAAA+TGG | - | chr1.1:82076658-82076677 | None:intergenic | 40.0% | |
| GATTCTCAACAATTCCTTGC+TGG | + | chr1.1:82078543-82078562 | MS.gene90885:CDS | 40.0% | |
| GCCAAGAACACTGACATAAA+TGG | - | chr1.1:82079386-82079405 | None:intergenic | 40.0% | |
| GCTACCTAGCAGTAAAGAAA+GGG | - | chr1.1:82078428-82078447 | None:intergenic | 40.0% | |
| GCTGTGGTAGAGTATAGTAA+AGG | - | chr1.1:82077954-82077973 | None:intergenic | 40.0% | |
| GGCAAACATGTTGATGCTTT+AGG | + | chr1.1:82079141-82079160 | MS.gene90885:CDS | 40.0% | |
| TATCTTCTATGCTGTAGCTG+TGG | - | chr1.1:82077970-82077989 | None:intergenic | 40.0% | |
| TGAAGTTCCTATGAAGTGCA+AGG | - | chr1.1:82076953-82076972 | None:intergenic | 40.0% | |
| TGAATAGGGTCTGTAAATCG+CGG | - | chr1.1:82076885-82076904 | None:intergenic | 40.0% | |
| TGCGTCTACACAAATAAAGG+AGG | - | chr1.1:82080745-82080764 | None:intergenic | 40.0% | |
| TGCTACCTAGCAGTAAAGAA+AGG | - | chr1.1:82078429-82078448 | None:intergenic | 40.0% | |
| TTGAAATTTCGGGGAAGTGA+CGG | + | chr1.1:82079646-82079665 | MS.gene90885:intron | 40.0% | |
| ! | ATCTGCAAAATAGGGTTAGC+AGG | - | chr1.1:82080052-82080071 | None:intergenic | 40.0% |
| ! | ATGGTCGGATATGTCTTTTG+CGG | - | chr1.1:82077785-82077804 | None:intergenic | 40.0% |
| ! | CATAAAGATACTTGCTACCG+TGG | + | chr1.1:82078072-82078091 | MS.gene90885:intron | 40.0% |
| ! | CCTCCGATTACTCTTTTTCT+AGG | + | chr1.1:82079036-82079055 | MS.gene90885:intron | 40.0% |
| ! | CTCTTGTCTTTTGCAGACTT+GGG | + | chr1.1:82078641-82078660 | MS.gene90885:CDS | 40.0% |
| ! | TGAAATGGAGATGGTTAGTC+GGG | + | chr1.1:82079912-82079931 | MS.gene90885:CDS | 40.0% |
| !! | GTTTTGGATGAGTAGGTAGA+GGG | + | chr1.1:82079798-82079817 | MS.gene90885:intron | 40.0% |
| !! | TGTTTTGGATGAGTAGGTAG+AGG | + | chr1.1:82079797-82079816 | MS.gene90885:intron | 40.0% |
| !!! | TTGTTTTAGATGCTTGCAGC+AGG | + | chr1.1:82078374-82078393 | MS.gene90885:CDS | 40.0% |
| AAGGAGTCCCGAATAGTTGT+AGG | - | chr1.1:82078334-82078353 | None:intergenic | 45.0% | |
| AGCTGCAGACACAATTGTTG+CGG | - | chr1.1:82078604-82078623 | None:intergenic | 45.0% | |
| AGTTCCTATGAAGTGCAAGG+TGG | - | chr1.1:82076950-82076969 | None:intergenic | 45.0% | |
| ATTCGTTTCATCCGGCAAAG+AGG | + | chr1.1:82076855-82076874 | MS.gene90885:CDS | 45.0% | |
| ATTTCCTCCCGAGGAATCTT+CGG | + | chr1.1:82079197-82079216 | MS.gene90885:CDS | 45.0% | |
| CAAAGGAAGGGAAGATTGTG+AGG | - | chr1.1:82076819-82076838 | None:intergenic | 45.0% | |
| CGACTAACCATCTCCATTTC+AGG | - | chr1.1:82079913-82079932 | None:intergenic | 45.0% | |
| CTATGCAGTTGCACTAACTC+AGG | - | chr1.1:82078005-82078024 | None:intergenic | 45.0% | |
| GAGATATCTTTCACGCCCTT+TGG | + | chr1.1:82077927-82077946 | MS.gene90885:intron | 45.0% | |
| GTGTCCCTTTCTTTACTGCT+AGG | + | chr1.1:82078421-82078440 | MS.gene90885:intron | 45.0% | |
| TGCAAGAGAAGCTCTTGGTT+TGG | + | chr1.1:82080020-82080039 | MS.gene90885:CDS | 45.0% | |
| TTATTATGGTGCGGAGAGAC+AGG | + | chr1.1:82077076-82077095 | MS.gene90885:CDS | 45.0% | |
| TTCGAGCTTGTGTTCAGAGA+AGG | - | chr1.1:82076785-82076804 | None:intergenic | 45.0% | |
| ! | GAAATGGAGATGGTTAGTCG+GGG | + | chr1.1:82079913-82079932 | MS.gene90885:CDS | 45.0% |
| ! | GCTCTTGTCTTTTGCAGACT+TGG | + | chr1.1:82078640-82078659 | MS.gene90885:CDS | 45.0% |
| ! | GTTTATTGTGGCGTTTGGTG+CGG | - | chr1.1:82076723-82076742 | None:intergenic | 45.0% |
| ! | TGGTTTCTAGGTTTGCGTCA+TGG | + | chr1.1:82077022-82077041 | MS.gene90885:CDS | 45.0% |
| ! | TGTTTTCAGCAAACCCAGCA+AGG | - | chr1.1:82078560-82078579 | None:intergenic | 45.0% |
| ! | TTGCGGCACGAACATTTTCA+AGG | - | chr1.1:82078587-82078606 | None:intergenic | 45.0% |
| !! | GCTGGGTTTGCTGAAAACAT+TGG | + | chr1.1:82078561-82078580 | MS.gene90885:CDS | 45.0% |
| !! | TGATGGTGGTGGTAGTAGTA+GGG | - | chr1.1:82076759-82076778 | None:intergenic | 45.0% |
| AAAGAAAGGGACACAGACGC+AGG | - | chr1.1:82078415-82078434 | None:intergenic | 50.0% | |
| CATCTCCATTTCAGGCTGCA+AGG | - | chr1.1:82079905-82079924 | None:intergenic | 50.0% | |
| CCTATGAAGTGCAAGGTGGA+AGG | - | chr1.1:82076946-82076965 | None:intergenic | 50.0% | |
| CCTTCCACCTTGCACTTCAT+AGG | + | chr1.1:82076943-82076962 | MS.gene90885:CDS | 50.0% | |
| CTTGCAGCCTGAAATGGAGA+TGG | + | chr1.1:82079903-82079922 | MS.gene90885:intron | 50.0% | |
| GAACAGACCGAAGATTCCTC+GGG | - | chr1.1:82079207-82079226 | None:intergenic | 50.0% | |
| GAGCTTGTGTTCAGAGAAGG+TGG | - | chr1.1:82076782-82076801 | None:intergenic | 50.0% | |
| GATGCTTACAGACTCGTTCG+AGG | + | chr1.1:82077312-82077331 | MS.gene90885:CDS | 50.0% | |
| GCGACGTACAAAGGAAGAAG+CGG | - | chr1.1:82076692-82076711 | None:intergenic | 50.0% | |
| GGAACAGACCGAAGATTCCT+CGG | - | chr1.1:82079208-82079227 | None:intergenic | 50.0% | |
| GGGATTGCAAGAGAAGCTCT+TGG | + | chr1.1:82080015-82080034 | MS.gene90885:CDS | 50.0% | |
| GGTGGAAAAGAGGTGGTTGT+TGG | + | chr1.1:82077105-82077124 | MS.gene90885:CDS | 50.0% | |
| GTGTTCAGAGAAGGTGGTGA+TGG | - | chr1.1:82076776-82076795 | None:intergenic | 50.0% | |
| GTTTGCAGTGAGGACAGTCA+CGG | + | chr1.1:82079994-82080013 | MS.gene90885:CDS | 50.0% | |
| TCTACGGATATTTCCTCCCG+AGG | + | chr1.1:82079188-82079207 | MS.gene90885:CDS | 50.0% | |
| TGTCTCCTTGCAGCCTGAAA+TGG | + | chr1.1:82079897-82079916 | MS.gene90885:intron | 50.0% | |
| TTTGCAGTGAGGACAGTCAC+GGG | + | chr1.1:82079995-82080014 | MS.gene90885:CDS | 50.0% | |
| ! | CAAAAGACAAGAGCGTGTGC+GGG | - | chr1.1:82078634-82078653 | None:intergenic | 50.0% |
| ! | GCAAAAGACAAGAGCGTGTG+CGG | - | chr1.1:82078635-82078654 | None:intergenic | 50.0% |
| !! | GTGATGGTGGTGGTAGTAGT+AGG | - | chr1.1:82076760-82076779 | None:intergenic | 50.0% |
| !! | TTCAGAGAAGGTGGTGATGG+TGG | - | chr1.1:82076773-82076792 | None:intergenic | 50.0% |
| AGGCGGGATAAGCATGGTTG+TGG | - | chr1.1:82076664-82076683 | None:intergenic | 55.0% | |
| ATCGCGGTATGCCTCTTTGC+CGG | - | chr1.1:82076869-82076888 | None:intergenic | 55.0% | |
| CAAAGGAAGAAGCGGAGACG+AGG | - | chr1.1:82076684-82076703 | None:intergenic | 55.0% | |
| CAGGAGTCTCGGTGGAAAAG+AGG | + | chr1.1:82077095-82077114 | MS.gene90885:CDS | 55.0% | |
| CCTCTGCGCCGTCAATTAAG+CGG | + | chr1.1:82077157-82077176 | MS.gene90885:CDS | 55.0% | |
| CTTAATTGACGGCGCAGAGG+TGG | - | chr1.1:82077157-82077176 | None:intergenic | 55.0% | |
| GAGTCTCGGTGGAAAAGAGG+TGG | + | chr1.1:82077098-82077117 | MS.gene90885:CDS | 55.0% | |
| GCAGTTGCACTAACTCAGGC+AGG | - | chr1.1:82078001-82078020 | None:intergenic | 55.0% | |
| !! | AGAGAAGGTGGTGATGGTGG+TGG | - | chr1.1:82076770-82076789 | None:intergenic | 55.0% |
| !! | AGAGGTGGTGGTGCTGTGAA+TGG | - | chr1.1:82077142-82077161 | None:intergenic | 55.0% |
| !! | AGGTGGTGGTGCTGTGAATG+GGG | - | chr1.1:82077140-82077159 | None:intergenic | 55.0% |
| !! | GAGGTGGTGGTGCTGTGAAT+GGG | - | chr1.1:82077141-82077160 | None:intergenic | 55.0% |
| !! | TATTGTGGCGTTTGGTGCGG+CGG | - | chr1.1:82076720-82076739 | None:intergenic | 55.0% |
| AATTGACGGCGCAGAGGTGG+TGG | - | chr1.1:82077154-82077173 | None:intergenic | 60.0% | |
| AGGAAGAAGCGGAGACGAGG+CGG | - | chr1.1:82076681-82076700 | None:intergenic | 60.0% | |
| CAGACCGAAGATTCCTCGGG+AGG | - | chr1.1:82079204-82079223 | None:intergenic | 60.0% | |
| CCGCTTAATTGACGGCGCAG+AGG | - | chr1.1:82077160-82077179 | None:intergenic | 60.0% | |
| GAGACGAGGCGGGATAAGCA+TGG | - | chr1.1:82076670-82076689 | None:intergenic | 60.0% | |
| GTGCGGAGAGACAGGAGTCT+CGG | + | chr1.1:82077084-82077103 | MS.gene90885:CDS | 60.0% | |
| !! | GGTGGTGGTGCTGTGAATGG+GGG | - | chr1.1:82077139-82077158 | None:intergenic | 60.0% |
| !! | GTGGTGGTGCTGTGAATGGG+GGG | - | chr1.1:82077138-82077157 | None:intergenic | 60.0% |
| CGGAGAGACAGGAGTCTCGG+TGG | + | chr1.1:82077087-82077106 | MS.gene90885:CDS | 65.0% | |
| GCGGCGACTGCGACGTACAA+AGG | - | chr1.1:82076701-82076720 | None:intergenic | 65.0% | |
| GGAAGAAGCGGAGACGAGGC+GGG | - | chr1.1:82076680-82076699 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 82076631 | 82080813 | 82076631 | ID=MS.gene90885 |
| chr1.1 | mRNA | 82076631 | 82080813 | 82076631 | ID=MS.gene90885.t1;Parent=MS.gene90885 |
| chr1.1 | exon | 82076631 | 82077333 | 82076631 | ID=MS.gene90885.t1.exon1;Parent=MS.gene90885.t1 |
| chr1.1 | CDS | 82076631 | 82077333 | 82076631 | ID=cds.MS.gene90885.t1;Parent=MS.gene90885.t1 |
| chr1.1 | exon | 82077761 | 82077816 | 82077761 | ID=MS.gene90885.t1.exon2;Parent=MS.gene90885.t1 |
| chr1.1 | CDS | 82077761 | 82077816 | 82077761 | ID=cds.MS.gene90885.t1;Parent=MS.gene90885.t1 |
| chr1.1 | exon | 82078286 | 82078395 | 82078286 | ID=MS.gene90885.t1.exon3;Parent=MS.gene90885.t1 |
| chr1.1 | CDS | 82078286 | 82078395 | 82078286 | ID=cds.MS.gene90885.t1;Parent=MS.gene90885.t1 |
| chr1.1 | exon | 82078503 | 82078662 | 82078503 | ID=MS.gene90885.t1.exon4;Parent=MS.gene90885.t1 |
| chr1.1 | CDS | 82078503 | 82078662 | 82078503 | ID=cds.MS.gene90885.t1;Parent=MS.gene90885.t1 |
| chr1.1 | exon | 82079126 | 82079218 | 82079126 | ID=MS.gene90885.t1.exon5;Parent=MS.gene90885.t1 |
| chr1.1 | CDS | 82079126 | 82079218 | 82079126 | ID=cds.MS.gene90885.t1;Parent=MS.gene90885.t1 |
| chr1.1 | exon | 82079910 | 82080041 | 82079910 | ID=MS.gene90885.t1.exon6;Parent=MS.gene90885.t1 |
| chr1.1 | CDS | 82079910 | 82080041 | 82079910 | ID=cds.MS.gene90885.t1;Parent=MS.gene90885.t1 |
| chr1.1 | exon | 82080760 | 82080813 | 82080760 | ID=MS.gene90885.t1.exon7;Parent=MS.gene90885.t1 |
| chr1.1 | CDS | 82080760 | 82080813 | 82080760 | ID=cds.MS.gene90885.t1;Parent=MS.gene90885.t1 |
| Gene Sequence |
| Protein sequence |
