Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92355.t1 | AES93571.2 | 88.2 | 638 | 24 | 3 | 2 | 589 | 5 | 641 | 1.6e-309 | 1071.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92355.t1 | Q6JDV7 | 54.2 | 677 | 232 | 12 | 8 | 627 | 16 | 671 | 5.4e-176 | 619.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92355.t1 | G7K0W3 | 88.2 | 638 | 24 | 3 | 2 | 589 | 5 | 641 | 1.1e-309 | 1071.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene92355 | 0.813979 | 1.95E-51 | -1.69E-46 |
| MS.gene049404 | MS.gene92355 | 0.814146 | 1.79E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene92355 | 0.815977 | 7.01E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene92355 | 0.825334 | 4.96E-54 | -1.69E-46 |
| MS.gene050759 | MS.gene92355 | 0.850578 | 1.55E-60 | -1.69E-46 |
| MS.gene050807 | MS.gene92355 | 0.80709 | 5.99E-50 | -1.69E-46 |
| MS.gene050826 | MS.gene92355 | 0.807591 | 4.69E-50 | -1.69E-46 |
| MS.gene050962 | MS.gene92355 | 0.842287 | 2.84E-58 | -1.69E-46 |
| MS.gene051198 | MS.gene92355 | 0.824668 | 7.12E-54 | -1.69E-46 |
| MS.gene051279 | MS.gene92355 | 0.832094 | 1.15E-55 | -1.69E-46 |
| MS.gene051800 | MS.gene92355 | 0.814397 | 1.57E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene92355 | 0.814891 | 1.22E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene92355 | 0.826619 | 2.46E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene92355 | 0.80994 | 1.48E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene92355 | 0.807344 | 5.29E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene92355 | 0.805941 | 1.05E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene92355 | 0.808803 | 2.59E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene92355 | 0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene05415 | MS.gene92355 | 0.82305 | 1.71E-53 | -1.69E-46 |
| MS.gene054236 | MS.gene92355 | 0.807534 | 4.82E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene92355 | 0.821014 | 5.06E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene92355 | 0.813321 | 2.72E-51 | -1.69E-46 |
| MS.gene054576 | MS.gene92355 | 0.802731 | 4.88E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene92355 | 0.812455 | 4.20E-51 | -1.69E-46 |
| MS.gene055227 | MS.gene92355 | 0.802625 | 5.13E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene92355 | 0.803195 | 3.92E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene92355 | 0.851797 | 7.02E-61 | -1.69E-46 |
| MS.gene05604 | MS.gene92355 | 0.818444 | 1.95E-52 | -1.69E-46 |
| MS.gene056162 | MS.gene92355 | 0.806722 | 7.17E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene92355 | 0.814302 | 1.65E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene92355 | 0.806729 | 7.14E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene92355 | 0.802988 | 4.32E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene92355 | 0.827412 | 1.59E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene92355 | 0.807436 | 5.06E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene92355 | 0.81782 | 2.70E-52 | -1.69E-46 |
| MS.gene060122 | MS.gene92355 | -0.802714 | 4.92E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene92355 | -0.803221 | 3.87E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene92355 | 0.808002 | 3.84E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene92355 | 0.814186 | 1.75E-51 | -1.69E-46 |
| MS.gene060373 | MS.gene92355 | 0.813761 | 2.17E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene92355 | 0.875385 | 3.21E-68 | -1.69E-46 |
| MS.gene060802 | MS.gene92355 | 0.809996 | 1.44E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92355 | MS.gene047859 | PPI |
| MS.gene92355 | MS.gene26467 | PPI |
| MS.gene059370 | MS.gene92355 | PPI |
| MS.gene26468 | MS.gene92355 | PPI |
| MS.gene059369 | MS.gene92355 | PPI |
| MS.gene92355 | MS.gene059371 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92355.t1 | MTR_5g005030 | 87.578 | 644 | 29 | 3 | 2 | 595 | 5 | 647 | 0.0 | 1135 |
| MS.gene92355.t1 | MTR_5g005040 | 71.698 | 106 | 28 | 1 | 592 | 695 | 85 | 190 | 4.54e-43 | 158 |
| MS.gene92355.t1 | MTR_5g004960 | 32.770 | 296 | 181 | 8 | 47 | 332 | 370 | 657 | 1.66e-33 | 139 |
| MS.gene92355.t1 | MTR_5g004960 | 32.770 | 296 | 181 | 8 | 47 | 332 | 370 | 657 | 1.77e-33 | 139 |
| MS.gene92355.t1 | MTR_5g004960 | 32.770 | 296 | 181 | 8 | 47 | 332 | 370 | 657 | 2.19e-33 | 139 |
| MS.gene92355.t1 | MTR_1g106210 | 56.250 | 112 | 43 | 2 | 592 | 698 | 88 | 198 | 3.05e-25 | 106 |
| MS.gene92355.t1 | MTR_4g094755 | 29.714 | 175 | 113 | 3 | 163 | 329 | 191 | 363 | 4.62e-13 | 73.2 |
| MS.gene92355.t1 | MTR_4g094755 | 29.714 | 175 | 113 | 3 | 163 | 329 | 191 | 363 | 7.84e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92355.t1 | AT1G49980 | 58.033 | 610 | 189 | 9 | 8 | 561 | 16 | 614 | 0.0 | 655 |
| MS.gene92355.t1 | AT1G49980 | 56.672 | 637 | 208 | 10 | 8 | 588 | 16 | 640 | 0.0 | 655 |
| MS.gene92355.t1 | AT1G49980 | 56.672 | 637 | 208 | 10 | 8 | 588 | 16 | 640 | 0.0 | 655 |
| MS.gene92355.t1 | AT1G49980 | 58.033 | 610 | 189 | 9 | 8 | 561 | 16 | 614 | 0.0 | 654 |
| MS.gene92355.t1 | AT1G49980 | 58.033 | 610 | 189 | 9 | 8 | 561 | 16 | 614 | 0.0 | 654 |
| MS.gene92355.t1 | AT1G49980 | 58.033 | 610 | 189 | 9 | 8 | 561 | 16 | 614 | 0.0 | 654 |
| MS.gene92355.t1 | AT1G49980 | 58.033 | 610 | 189 | 9 | 8 | 561 | 16 | 614 | 0.0 | 654 |
| MS.gene92355.t1 | AT1G49980 | 58.700 | 477 | 169 | 8 | 97 | 561 | 1 | 461 | 2.12e-174 | 511 |
| MS.gene92355.t1 | AT1G49980 | 58.898 | 472 | 176 | 8 | 97 | 561 | 1 | 461 | 2.17e-174 | 511 |
| MS.gene92355.t1 | AT5G44750 | 29.231 | 390 | 227 | 14 | 49 | 406 | 376 | 748 | 2.15e-32 | 135 |
| MS.gene92355.t1 | AT5G44750 | 29.188 | 394 | 226 | 15 | 49 | 406 | 376 | 752 | 8.97e-32 | 134 |
| MS.gene92355.t1 | AT5G44740 | 28.134 | 359 | 178 | 10 | 45 | 329 | 11 | 363 | 1.72e-25 | 112 |
| MS.gene92355.t1 | AT5G44740 | 30.857 | 175 | 111 | 3 | 163 | 329 | 107 | 279 | 3.95e-14 | 76.6 |
| MS.gene92355.t1 | AT5G44740 | 30.857 | 175 | 111 | 3 | 163 | 329 | 124 | 296 | 5.23e-14 | 76.3 |
Find 141 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTCCTTTCTTTCCTTTC+TGG | 0.035527 | 5.1:+318213 | None:intergenic |
| TTTATACAGGCCAGGAAATT+TGG | 0.195002 | 5.1:-323336 | MS.gene92355:intron |
| TTTAAGTAACCCTATGTTAA+AGG | 0.210169 | 5.1:-323483 | MS.gene92355:CDS |
| TACTCTGTGGGTTTAGGTTT+GGG | 0.229231 | 5.1:-321559 | MS.gene92355:CDS |
| CACATTCAGCAGAGGTTATC+TGG | 0.234143 | 5.1:-317806 | MS.gene92355:CDS |
| CTCGCGACCTTTCAAGGATT+TGG | 0.266763 | 5.1:-323547 | MS.gene92355:CDS |
| CAGTGAATGTACAGAGGTTC+TGG | 0.275216 | 5.1:-320098 | MS.gene92355:CDS |
| GCTTCAGTCCCTGCTGATTT+AGG | 0.275310 | 5.1:-317784 | MS.gene92355:CDS |
| GGAGTTCGTTCTGCCATGCC+TGG | 0.295650 | 5.1:-323315 | MS.gene92355:CDS |
| TTACTCTGTGGGTTTAGGTT+TGG | 0.301255 | 5.1:-321560 | MS.gene92355:CDS |
| GCAAAATGATTTGATAGTTT+AGG | 0.305032 | 5.1:+317652 | None:intergenic |
| CCTGTTTCAGTACGATTAAT+AGG | 0.312775 | 5.1:-320751 | MS.gene92355:intron |
| AAGAAGGTTCCAGTGGATTC+AGG | 0.316867 | 5.1:-318276 | MS.gene92355:CDS |
| ATTACAAATTTCATTACTTC+AGG | 0.328953 | 5.1:-320504 | MS.gene92355:CDS |
| GACGAAGGAAACCTCATAAT+TGG | 0.339849 | 5.1:+323418 | None:intergenic |
| GAAGAAGCAACTCGGCAAAA+TGG | 0.357055 | 5.1:+319888 | None:intergenic |
| ATCATTTCCTGACAAGAATT+AGG | 0.357770 | 5.1:+320001 | None:intergenic |
| CCTATTAATCGTACTGAAAC+AGG | 0.360995 | 5.1:+320751 | None:intergenic |
| TCATCTGCAAATTGCTTCTC+AGG | 0.361982 | 5.1:+318156 | None:intergenic |
| CGAGGAAAAGACCTGCATTC+AGG | 0.364495 | 5.1:-318302 | MS.gene92355:CDS |
| GGTAAAACATACTGTCCATT+TGG | 0.365773 | 5.1:+322163 | None:intergenic |
| ATTCTCCCCAAGCAAGATTT+CGG | 0.366592 | 5.1:-321528 | MS.gene92355:CDS |
| AAGCTTCTCGCGACCTTTCA+AGG | 0.369769 | 5.1:-323553 | MS.gene92355:CDS |
| CACTAAACTGTGATACTCTA+AGG | 0.372191 | 5.1:+320568 | None:intergenic |
| TGACAGTTGTTTCATTCAAC+AGG | 0.373638 | 5.1:+317827 | None:intergenic |
| GAATTTCATCGCTGGTAGTC+TGG | 0.379435 | 5.1:-323093 | MS.gene92355:CDS |
| GTATACTTGTTGAAATCAAC+TGG | 0.388510 | 5.1:+323252 | None:intergenic |
| TGCCGAGTTGCTTCTTCAAA+AGG | 0.397139 | 5.1:-319882 | MS.gene92355:CDS |
| TTTCTGGACGATGGTTAAAC+TGG | 0.397629 | 5.1:+318229 | None:intergenic |
| TTAAGTAACCCTATGTTAAA+GGG | 0.398161 | 5.1:-323482 | MS.gene92355:CDS |
| CTAATCTCCTGGAGGATGAT+AGG | 0.398223 | 5.1:-320024 | MS.gene92355:CDS |
| ATTGGCCTGCCCTTTAACAT+AGG | 0.399508 | 5.1:+323473 | None:intergenic |
| TACAGTGATTTGACCAGAAA+AGG | 0.401634 | 5.1:-323225 | MS.gene92355:intron |
| AGAACGAACTCCAAATTTCC+TGG | 0.407264 | 5.1:+323326 | None:intergenic |
| GATATCCACTGCCAATTATG+AGG | 0.408271 | 5.1:-323429 | MS.gene92355:intron |
| GATTTGGTTACATGTAGATA+TGG | 0.415193 | 5.1:-323531 | MS.gene92355:CDS |
| GAAACTGATCTTTCCCTTGA+CGG | 0.420296 | 5.1:-320417 | MS.gene92355:CDS |
| AGACTACCAGCGATGAAATT+CGG | 0.430802 | 5.1:+323095 | None:intergenic |
| ACCTTCTTCTTCCTGAATGC+AGG | 0.431352 | 5.1:+318291 | None:intergenic |
| ATGTGAGCAGATGCTGGATA+AGG | 0.432320 | 5.1:-321883 | MS.gene92355:CDS |
| TTACTTCAGGAGAAGCCAAT+TGG | 0.434213 | 5.1:-320491 | MS.gene92355:CDS |
| TCCTGTCCGCCTAAATCAGC+AGG | 0.437301 | 5.1:+317775 | None:intergenic |
| ATAACAGCCAAGCGGTCATT+TGG | 0.439647 | 5.1:+322142 | None:intergenic |
| AATCTTTCCTCAACAAAACT+TGG | 0.440500 | 5.1:+319926 | None:intergenic |
| AAGCAGCAATCCATACCATT+TGG | 0.442071 | 5.1:-318184 | MS.gene92355:CDS |
| GAGTTCGTTCTGCCATGCCT+GGG | 0.453647 | 5.1:-323314 | MS.gene92355:CDS |
| CTGGGATCAACTTCTTTCCA+AGG | 0.459075 | 5.1:-320079 | MS.gene92355:CDS |
| TATATATTGTACCTTTGAAT+CGG | 0.462105 | 5.1:+319830 | None:intergenic |
| AACAAATGATTACCATCAAA+AGG | 0.462445 | 5.1:+320363 | None:intergenic |
| TTTGAAATTAGCTTTCCCTT+TGG | 0.466327 | 5.1:-317752 | MS.gene92355:CDS |
| CCCTGCTGATTTAGGCGGAC+AGG | 0.473035 | 5.1:-317776 | MS.gene92355:CDS |
| ATTTGCTTTGTCTATTGAAT+CGG | 0.473853 | 5.1:+319671 | None:intergenic |
| TCTTTCCAAGGGCAGTTTGA+GGG | 0.475133 | 5.1:-320067 | MS.gene92355:CDS |
| ATAGTCTTCTGTGTAGGATC+AGG | 0.476314 | 5.1:+320525 | None:intergenic |
| TGATAGGCCTAATTCTTGTC+AGG | 0.480794 | 5.1:-320008 | MS.gene92355:CDS |
| GCTTCTCAGGTCTGTCCAAA+TGG | 0.486070 | 5.1:+318169 | None:intergenic |
| ACCGAATCGCTTACTTGCTA+AGG | 0.488096 | 5.1:-322861 | MS.gene92355:intron |
| ATGCAACAGCGCTTCATCCT+CGG | 0.489046 | 5.1:+321471 | None:intergenic |
| TTTCTTTCCTTTCTGGACGA+TGG | 0.493241 | 5.1:+318220 | None:intergenic |
| TGATAAAAGAATTCTTGAAC+TGG | 0.493707 | 5.1:-323576 | MS.gene92355:CDS |
| CTTTCCTCAACAAAACTTGG+AGG | 0.498930 | 5.1:+319929 | None:intergenic |
| TGTGAGCAGATGCTGGATAA+GGG | 0.498978 | 5.1:-321882 | MS.gene92355:CDS |
| TTGGCCTGCCCTTTAACATA+GGG | 0.499608 | 5.1:+323474 | None:intergenic |
| GAATAACGGGTCTAATCTCC+TGG | 0.502177 | 5.1:-320035 | MS.gene92355:CDS |
| CTCAAACAGACCTTTCTGAT+AGG | 0.502889 | 5.1:+322100 | None:intergenic |
| TCAGGTCTGTCCAAATGGTA+TGG | 0.502962 | 5.1:+318174 | None:intergenic |
| AAGCACATGTGAGCAGATGC+TGG | 0.504634 | 5.1:-321889 | MS.gene92355:CDS |
| CACTAGCGCGAAAGCAGGAA+TGG | 0.504927 | 5.1:-323876 | MS.gene92355:CDS |
| ATTACCAAAGCTCCACTCTT+CGG | 0.505152 | 5.1:-320332 | MS.gene92355:CDS |
| AACAGACCTTTCTGATAGGA+AGG | 0.506790 | 5.1:+322104 | None:intergenic |
| TTCTTTCCAAGGGCAGTTTG+AGG | 0.508910 | 5.1:-320068 | MS.gene92355:CDS |
| ATCTGTGTGCCTACCGTCAA+GGG | 0.510405 | 5.1:+320404 | None:intergenic |
| TTTGTAATAGTCTTCTGTGT+AGG | 0.512750 | 5.1:+320519 | None:intergenic |
| TGCAAACTTCAGTTATATCA+AGG | 0.516821 | 5.1:+323060 | None:intergenic |
| AGTGAATGTACAGAGGTTCT+GGG | 0.525641 | 5.1:-320097 | MS.gene92355:CDS |
| ACCTTAGCAAGTAAGCGATT+CGG | 0.530222 | 5.1:+322860 | None:intergenic |
| ACTGGTCTCACATGTAGTGC+TGG | 0.531695 | 5.1:-322890 | MS.gene92355:CDS |
| CCATGCCTGGGTTTATTGCA+CGG | 0.534158 | 5.1:-323302 | MS.gene92355:CDS |
| AGCGCAGAGTGGTCTGCAGT+TGG | 0.535364 | 5.1:-317697 | MS.gene92355:CDS |
| ACTGGAACAAAGATTAACTC+TGG | 0.536947 | 5.1:+323270 | None:intergenic |
| CATGTAACCAAATCCTTGAA+AGG | 0.537054 | 5.1:+323540 | None:intergenic |
| ATTCTAATTTCAAAGCCAAA+GGG | 0.538073 | 5.1:+317737 | None:intergenic |
| AATTCTAATTTCAAAGCCAA+AGG | 0.538917 | 5.1:+317736 | None:intergenic |
| GATCTCTAGCATGCTGATGA+TGG | 0.541217 | 5.1:+317849 | None:intergenic |
| GGAAATGATAATGTTGTGGT+TGG | 0.541962 | 5.1:-319987 | MS.gene92355:CDS |
| TTTGAATCGGAACAGATGCT+TGG | 0.545838 | 5.1:+319843 | None:intergenic |
| AATTAGGCCTATCATCCTCC+AGG | 0.548855 | 5.1:+320017 | None:intergenic |
| GACATGGTGCCAACAGCCAT+TGG | 0.549036 | 5.1:+323455 | None:intergenic |
| ATCGTCCAGAAAGGAAAGAA+AGG | 0.549142 | 5.1:-318218 | MS.gene92355:CDS |
| AAGCATCTGTTCCGATTCAA+AGG | 0.554546 | 5.1:-319841 | MS.gene92355:intron |
| GACCACTCTGCGCTAAATGA+AGG | 0.554793 | 5.1:+317706 | None:intergenic |
| TCCACTCTTCGGAAAACTGA+TGG | 0.556851 | 5.1:-320321 | MS.gene92355:CDS |
| TATGTTAAAGGGCAGGCCAA+TGG | 0.557242 | 5.1:-323471 | MS.gene92355:CDS |
| GTAACCCTATGTTAAAGGGC+AGG | 0.561428 | 5.1:-323478 | MS.gene92355:CDS |
| GGGTTTAGGTTTGGGAAAGA+CGG | 0.563053 | 5.1:-321551 | MS.gene92355:CDS |
| GTTTACACTAGCGCGAAAGC+AGG | 0.568256 | 5.1:-323881 | MS.gene92355:CDS |
| AGTTTAACCATCGTCCAGAA+AGG | 0.569518 | 5.1:-318227 | MS.gene92355:CDS |
| GGAAACCTCATAATTGGCAG+TGG | 0.570621 | 5.1:+323424 | None:intergenic |
| GAAAACTGATGGTGCAGAGA+AGG | 0.570685 | 5.1:-320310 | MS.gene92355:intron |
| CTTAGAGTATCACAGTTTAG+TGG | 0.571256 | 5.1:-320567 | MS.gene92355:CDS |
| AGATGACAGAGCACCCTACA+AGG | 0.575060 | 5.1:-318139 | MS.gene92355:CDS |
| ATCCTCCCTTCCTATCAGAA+AGG | 0.575436 | 5.1:-322110 | MS.gene92355:intron |
| CTGATCTTTCCCTTGACGGT+AGG | 0.579399 | 5.1:-320413 | MS.gene92355:CDS |
| TCCAGAAAGGAAAGAAAGGA+AGG | 0.579868 | 5.1:-318214 | MS.gene92355:CDS |
| TTAACGTCTCCTGAATCCAC+TGG | 0.581023 | 5.1:+318267 | None:intergenic |
| TGGGATCAACTTCTTTCCAA+GGG | 0.581757 | 5.1:-320078 | MS.gene92355:CDS |
| ACCTGCATTCAGGAAGAAGA+AGG | 0.582202 | 5.1:-318292 | MS.gene92355:CDS |
| AGCGCGAAAGCAGGAATGGA+AGG | 0.585360 | 5.1:-323872 | MS.gene92355:CDS |
| TCAGACATAAACAAGCCAAA+TGG | 0.586732 | 5.1:-322178 | MS.gene92355:CDS |
| TCTCACATGTAGTGCTGGAG+TGG | 0.588105 | 5.1:-322885 | MS.gene92355:CDS |
| GATCTGTGTGCCTACCGTCA+AGG | 0.594862 | 5.1:+320403 | None:intergenic |
| AAGGGCAGGCCAATGGCTGT+TGG | 0.602052 | 5.1:-323464 | MS.gene92355:CDS |
| TCAGTCCCTGCTGATTTAGG+CGG | 0.603040 | 5.1:-317781 | MS.gene92355:CDS |
| TATGATCCGAATTTCATCGC+TGG | 0.611918 | 5.1:-323101 | MS.gene92355:CDS |
| TGCCTTCATTTAGCGCAGAG+TGG | 0.612055 | 5.1:-317708 | MS.gene92355:CDS |
| AGAAAGGAAAGAAAGGAAGG+AGG | 0.614792 | 5.1:-318211 | MS.gene92355:CDS |
| GTCAGGAAATGATAATGTTG+TGG | 0.616151 | 5.1:-319991 | MS.gene92355:CDS |
| GACTATAAATGTTCACTCTG+TGG | 0.619008 | 5.1:-319962 | MS.gene92355:CDS |
| GACCTTTCTGATAGGAAGGG+AGG | 0.620126 | 5.1:+322108 | None:intergenic |
| GTCGGCGTTTATGAAGAGAC+TGG | 0.621129 | 5.1:-322908 | MS.gene92355:CDS |
| CCGTGCAATAAACCCAGGCA+TGG | 0.621698 | 5.1:+323302 | None:intergenic |
| AGCTTCCGTGCAATAAACCC+AGG | 0.632231 | 5.1:+323297 | None:intergenic |
| CAGGAAGAAGAAGGTTCCAG+TGG | 0.642614 | 5.1:-318283 | MS.gene92355:CDS |
| ACAGACCTTTCTGATAGGAA+GGG | 0.643641 | 5.1:+322105 | None:intergenic |
| TGGGAAGCGATGATAATCGA+TGG | 0.648696 | 5.1:-323919 | MS.gene92355:CDS |
| GGCAGTGGATATCATAGACA+TGG | 0.648981 | 5.1:+323439 | None:intergenic |
| CTGTATCAGCGACAAAGTCG+TGG | 0.657275 | 5.1:+320439 | None:intergenic |
| ATTGCTCAAGAAATCAGAGT+CGG | 0.667415 | 5.1:-322926 | MS.gene92355:CDS |
| CAGTTTAGTGGACAAAAGTG+TGG | 0.667576 | 5.1:-320555 | MS.gene92355:CDS |
| CCTGTCCGCCTAAATCAGCA+GGG | 0.682258 | 5.1:+317776 | None:intergenic |
| GGAAAAGTATCAGCAATGAG+AGG | 0.686628 | 5.1:-321507 | MS.gene92355:CDS |
| TATACATCTCACAGACAAGG+TGG | 0.687957 | 5.1:-318360 | MS.gene92355:CDS |
| CAACAGCGCTTCATCCTCGG+TGG | 0.690052 | 5.1:+321474 | None:intergenic |
| ACAACTGTCACATTCAGCAG+AGG | 0.705530 | 5.1:-317814 | MS.gene92355:CDS |
| TAACGGGTCTAATCTCCTGG+AGG | 0.717537 | 5.1:-320032 | MS.gene92355:CDS |
| TGAAAGTCATAACAGCCAAG+CGG | 0.719674 | 5.1:+322134 | None:intergenic |
| GATTATACATCTCACAGACA+AGG | 0.721311 | 5.1:-318363 | MS.gene92355:CDS |
| ACAATCAACCTCCTACCTCG+AGG | 0.722277 | 5.1:-318320 | MS.gene92355:CDS |
| TAACCACAGTGAATGTACAG+AGG | 0.737996 | 5.1:-320104 | MS.gene92355:CDS |
| TGATAGTGTTGACAGATTGG+GGG | 0.759194 | 5.1:-321957 | MS.gene92355:intron |
| GAACCTCTGTACATTCACTG+TGG | 0.779512 | 5.1:+320101 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATAACTTCTTAATTT+AGG | - | chr5.1:317922-317941 | MS.gene92355:intron | 10.0% |
| !! | ATAATTTCTATTTGTAATTA+TGG | - | chr5.1:322196-322215 | MS.gene92355:intron | 10.0% |
| !! | ATTAATAACTTCTTAATTTA+GGG | - | chr5.1:317923-317942 | MS.gene92355:intron | 10.0% |
| !! | ATTATGATAAGATAAATTAT+TGG | - | chr5.1:320550-320569 | MS.gene92355:CDS | 10.0% |
| !! | CAAAAATCAATAAATTAATA+AGG | + | chr5.1:322605-322624 | None:intergenic | 10.0% |
| !! | CAGTTAATTTATAAAATTAT+TGG | - | chr5.1:319513-319532 | MS.gene92355:intron | 10.0% |
| !!! | CAATAATTTTATAAATTAAC+TGG | + | chr5.1:319515-319534 | None:intergenic | 10.0% |
| !! | AAAATTATATAAAAGGTAAC+TGG | + | chr5.1:319022-319041 | None:intergenic | 15.0% |
| !! | GGCTAAAAAAATTATATAAA+AGG | + | chr5.1:319029-319048 | None:intergenic | 15.0% |
| !!! | AAAAAAAATAATACCTTTTC+TGG | + | chr5.1:318359-318378 | None:intergenic | 15.0% |
| !!! | AATTTATTGATTTTTGTGAT+GGG | - | chr5.1:322609-322628 | MS.gene92355:intron | 15.0% |
| !!! | TAATTTATTGATTTTTGTGA+TGG | - | chr5.1:322608-322627 | MS.gene92355:intron | 15.0% |
| !!! | TCATTTTCTAAAAGAAATAT+CGG | - | chr5.1:322840-322859 | MS.gene92355:intron | 15.0% |
| !!! | TTTTTAAATGAAATACATTG+AGG | - | chr5.1:318862-318881 | MS.gene92355:intron | 15.0% |
| !! | ACAATTGCAAAAAAAATAGT+GGG | - | chr5.1:321786-321805 | MS.gene92355:intron | 20.0% |
| !! | AGATTATTAGCCAATAATAA+CGG | + | chr5.1:322036-322055 | None:intergenic | 20.0% |
| !! | ATTACAAATTTCATTACTTC+AGG | - | chr5.1:321064-321083 | MS.gene92355:intron | 20.0% |
| !! | ATTTACTAGATAACACTAAA+AGG | - | chr5.1:319112-319131 | MS.gene92355:intron | 20.0% |
| !! | CAAACAAATAGAATAAGTTT+AGG | + | chr5.1:322527-322546 | None:intergenic | 20.0% |
| !! | CATGATAAAATGAAAAAAAC+TGG | + | chr5.1:318945-318964 | None:intergenic | 20.0% |
| !! | CCAAAAATAAAACAAGTTAA+CGG | + | chr5.1:320852-320871 | None:intergenic | 20.0% |
| !! | CTAACAAAAAAATGATCAAT+GGG | + | chr5.1:321964-321983 | None:intergenic | 20.0% |
| !! | TACAATTGCAAAAAAAATAG+TGG | - | chr5.1:321785-321804 | MS.gene92355:intron | 20.0% |
| !! | TATATATTGTACCTTTGAAT+CGG | + | chr5.1:321741-321760 | None:intergenic | 20.0% |
| !! | TCATTTATCACATTATCAAA+AGG | - | chr5.1:317860-317879 | MS.gene92355:intron | 20.0% |
| !! | TTTAATATAATCACATGTGT+CGG | + | chr5.1:322815-322834 | None:intergenic | 20.0% |
| !! | TTTACTAGATAACACTAAAA+GGG | - | chr5.1:319113-319132 | MS.gene92355:intron | 20.0% |
| !!! | AAAAATGATGGAAAACAAAA+AGG | - | chr5.1:322955-322974 | MS.gene92355:intron | 20.0% |
| !!! | AAAAGAACTATTTTTCCAAT+TGG | + | chr5.1:321095-321114 | None:intergenic | 20.0% |
| !!! | AAAATCCTTCTTTTAACATA+TGG | - | chr5.1:319957-319976 | MS.gene92355:CDS | 20.0% |
| !!! | AAAATGATGGAAAACAAAAA+GGG | - | chr5.1:322956-322975 | MS.gene92355:intron | 20.0% |
| !!! | AGCTTTGTGTTAAAATATAT+AGG | - | chr5.1:319149-319168 | MS.gene92355:intron | 20.0% |
| !!! | ATTGAAAATTTGAAATCTAC+CGG | + | chr5.1:320173-320192 | None:intergenic | 20.0% |
| !!! | ATTTATTGATTTTTGTGATG+GGG | - | chr5.1:322610-322629 | MS.gene92355:intron | 20.0% |
| !!! | ATTTTTAAAGGGAAAAAAAG+AGG | + | chr5.1:318611-318630 | None:intergenic | 20.0% |
| !!! | CATTGATCATTTTTTTGTTA+GGG | - | chr5.1:321963-321982 | MS.gene92355:intron | 20.0% |
| !!! | CTACATATTCCATTTTTAAA+GGG | + | chr5.1:318622-318641 | None:intergenic | 20.0% |
| !!! | GAACATTTTTTTTATCTTTC+TGG | - | chr5.1:319827-319846 | MS.gene92355:intron | 20.0% |
| !!! | TCTACATATTCCATTTTTAA+AGG | + | chr5.1:318623-318642 | None:intergenic | 20.0% |
| !!! | TCTTTTTTTCCCTTTAAAAA+TGG | - | chr5.1:318610-318629 | MS.gene92355:intron | 20.0% |
| !!! | TTTATTTTTGGCAATTAAGA+TGG | - | chr5.1:320861-320880 | MS.gene92355:intron | 20.0% |
| !!! | TTTTTTCAGCATCATTTAAA+TGG | - | chr5.1:319774-319793 | MS.gene92355:intron | 20.0% |
| ! | AAAATAGAGAAACTCATTGA+GGG | - | chr5.1:322247-322266 | MS.gene92355:intron | 25.0% |
| ! | AAATACACAATCTATAGGTT+CGG | - | chr5.1:320710-320729 | MS.gene92355:intron | 25.0% |
| ! | AAATGCCATATGTTAAAAGA+AGG | + | chr5.1:319965-319984 | None:intergenic | 25.0% |
| ! | AACAAATGATTACCATCAAA+AGG | + | chr5.1:321208-321227 | None:intergenic | 25.0% |
| ! | AAGAGGTTTAATACATTTGA+AGG | + | chr5.1:318594-318613 | None:intergenic | 25.0% |
| ! | AATAAAAAGAAAACACCAAG+TGG | + | chr5.1:318843-318862 | None:intergenic | 25.0% |
| ! | AATGTGTAAGTTATCCAAAT+TGG | + | chr5.1:319090-319109 | None:intergenic | 25.0% |
| ! | AATTAGTAATGCGTAAACAT+TGG | + | chr5.1:321386-321405 | None:intergenic | 25.0% |
| ! | AATTCTAATTTCAAAGCCAA+AGG | + | chr5.1:323835-323854 | None:intergenic | 25.0% |
| ! | AGTTCGAAATTGTGAATAAA+AGG | + | chr5.1:322358-322377 | None:intergenic | 25.0% |
| ! | ATCGCTACTTAGAAAAATAA+GGG | + | chr5.1:321302-321321 | None:intergenic | 25.0% |
| ! | ATGTGTAAGTTATCCAAATT+GGG | + | chr5.1:319089-319108 | None:intergenic | 25.0% |
| ! | ATTATATAACTCAAAAGCTG+AGG | - | chr5.1:323049-323068 | MS.gene92355:CDS | 25.0% |
| ! | ATTCTAATTTCAAAGCCAAA+GGG | + | chr5.1:323834-323853 | None:intergenic | 25.0% |
| ! | ATTGTTTATGAAATGAGCAA+AGG | - | chr5.1:317744-317763 | MS.gene92355:CDS | 25.0% |
| ! | ATTTGCTTTGTCTATTGAAT+CGG | + | chr5.1:321900-321919 | None:intergenic | 25.0% |
| ! | CAACAACAAGAAGTAAATAA+AGG | - | chr5.1:322408-322427 | MS.gene92355:intron | 25.0% |
| ! | CAGTTATTGTTTATCTTTCA+GGG | - | chr5.1:320143-320162 | MS.gene92355:intron | 25.0% |
| ! | CCTAACAAAAAAATGATCAA+TGG | + | chr5.1:321965-321984 | None:intergenic | 25.0% |
| ! | CGATTCAAGCTTATAATATA+TGG | + | chr5.1:318175-318194 | None:intergenic | 25.0% |
| ! | CTAAGAAATACACAATCTAT+AGG | - | chr5.1:320705-320724 | MS.gene92355:intron | 25.0% |
| ! | TAAAATAGAGAAACTCATTG+AGG | - | chr5.1:322246-322265 | MS.gene92355:intron | 25.0% |
| ! | TAAATGAAATACATTGAGGA+AGG | - | chr5.1:318866-318885 | MS.gene92355:intron | 25.0% |
| ! | TATCGCTACTTAGAAAAATA+AGG | + | chr5.1:321303-321322 | None:intergenic | 25.0% |
| ! | TCAGTTATTGTTTATCTTTC+AGG | - | chr5.1:320142-320161 | MS.gene92355:intron | 25.0% |
| ! | TGAGTTATACATGTAAACAT+GGG | + | chr5.1:323643-323662 | None:intergenic | 25.0% |
| ! | TGATAAAAGAATTCTTGAAC+TGG | - | chr5.1:317992-318011 | MS.gene92355:intron | 25.0% |
| ! | TGGAAAACAGAAAATCATAA+AGG | + | chr5.1:318925-318944 | None:intergenic | 25.0% |
| ! | TTAAGTAACCCTATGTTAAA+GGG | - | chr5.1:318086-318105 | MS.gene92355:intron | 25.0% |
| ! | TTACTAGATAACACTAAAAG+GGG | - | chr5.1:319114-319133 | MS.gene92355:intron | 25.0% |
| ! | TTTAAGTAACCCTATGTTAA+AGG | - | chr5.1:318085-318104 | MS.gene92355:intron | 25.0% |
| ! | TTTATTCAAACAGACTCAAA+GGG | - | chr5.1:322318-322337 | MS.gene92355:intron | 25.0% |
| ! | TTTGTATAAAGACGTTGTTA+AGG | - | chr5.1:323596-323615 | MS.gene92355:intron | 25.0% |
| !! | AATATTTTCAGAATGAGGAA+CGG | - | chr5.1:317772-317791 | MS.gene92355:CDS | 25.0% |
| !! | AGATATACAGGTAAAAGTTT+TGG | + | chr5.1:319050-319069 | None:intergenic | 25.0% |
| !! | ATAAGATAAATTATTGGCCT+GGG | - | chr5.1:320556-320575 | MS.gene92355:CDS | 25.0% |
| !! | ATCCAAATATTTTCAGAATG+AGG | - | chr5.1:317767-317786 | MS.gene92355:CDS | 25.0% |
| !! | GCAAAATGATTTGATAGTTT+AGG | + | chr5.1:323919-323938 | None:intergenic | 25.0% |
| !! | GTAAGTTTAGCTTCATATAA+AGG | - | chr5.1:319877-319896 | MS.gene92355:CDS | 25.0% |
| !! | GTTTTTCCTTTAATTACTGA+TGG | - | chr5.1:318407-318426 | MS.gene92355:CDS | 25.0% |
| !! | TATCAAATCATTTTGCTTGA+GGG | - | chr5.1:323923-323942 | MS.gene92355:CDS | 25.0% |
| !! | TATGTTTATGTCTTTGAAAG+AGG | - | chr5.1:319566-319585 | MS.gene92355:intron | 25.0% |
| !! | TGATAATGTGATAAATGAGA+GGG | + | chr5.1:317858-317877 | None:intergenic | 25.0% |
| !! | TGTCTCTGATTTTTATATTC+TGG | - | chr5.1:318385-318404 | MS.gene92355:CDS | 25.0% |
| !! | TTCCTCATTCTGAAAATATT+TGG | + | chr5.1:317772-317791 | None:intergenic | 25.0% |
| !! | TTGACAAAGAAAAAGTACAA+AGG | - | chr5.1:317721-317740 | MS.gene92355:CDS | 25.0% |
| !! | TTTTATTCAAACAGACTCAA+AGG | - | chr5.1:322317-322336 | MS.gene92355:intron | 25.0% |
| !!! | CCATTGATCATTTTTTTGTT+AGG | - | chr5.1:321962-321981 | MS.gene92355:intron | 25.0% |
| !!! | CCGTTAACTTGTTTTATTTT+TGG | - | chr5.1:320849-320868 | MS.gene92355:intron | 25.0% |
| !!! | TATTTTTTTCTTCTCCTCTT+AGG | - | chr5.1:320977-320996 | MS.gene92355:intron | 25.0% |
| !!! | TCAGCTTTTGAGTTATATAA+TGG | + | chr5.1:323050-323069 | None:intergenic | 25.0% |
| !!! | TTGATAATGTGATAAATGAG+AGG | + | chr5.1:317859-317878 | None:intergenic | 25.0% |
| AAGCTACCATCAGTAATTAA+AGG | + | chr5.1:318416-318435 | None:intergenic | 30.0% | |
| AATCTTTCCTCAACAAAACT+TGG | + | chr5.1:321645-321664 | None:intergenic | 30.0% | |
| AATGACATCATGTAATCACA+TGG | + | chr5.1:322707-322726 | None:intergenic | 30.0% | |
| ACGATTGATATCTTAATGAG+TGG | + | chr5.1:322494-322513 | None:intergenic | 30.0% | |
| AGCTTATAATATATGGACGA+AGG | + | chr5.1:318168-318187 | None:intergenic | 30.0% | |
| AGGGAAAAAATGTGAATAAC+GGG | - | chr5.1:321520-321539 | MS.gene92355:CDS | 30.0% | |
| ATCATTTCCTGACAAGAATT+AGG | + | chr5.1:321570-321589 | None:intergenic | 30.0% | |
| ATGACATCATGTAATCACAT+GGG | + | chr5.1:322706-322725 | None:intergenic | 30.0% | |
| ATTAACTGGCAAGATGAAAT+TGG | + | chr5.1:319501-319520 | None:intergenic | 30.0% | |
| ATTGTAAAAACCACGACAAA+TGG | + | chr5.1:321771-321790 | None:intergenic | 30.0% | |
| CATGTTTACATGTATAACTC+AGG | - | chr5.1:323642-323661 | MS.gene92355:intron | 30.0% | |
| CTAATAATGAACGATACTGT+TGG | - | chr5.1:322929-322948 | MS.gene92355:CDS | 30.0% | |
| CTGAGTTATACATGTAAACA+TGG | + | chr5.1:323644-323663 | None:intergenic | 30.0% | |
| CTGTCAGATTAAAATTGCAA+TGG | - | chr5.1:318565-318584 | MS.gene92355:intron | 30.0% | |
| GAGGGAAAAAATGTGAATAA+CGG | - | chr5.1:321519-321538 | MS.gene92355:CDS | 30.0% | |
| GAGTTATACATGTAAACATG+GGG | + | chr5.1:323642-323661 | None:intergenic | 30.0% | |
| GATAAGATAAATTATTGGCC+TGG | - | chr5.1:320555-320574 | MS.gene92355:CDS | 30.0% | |
| GGGAAATGAAATACTTAGTT+GGG | + | chr5.1:323622-323641 | None:intergenic | 30.0% | |
| TAGCATTTGCAAGAGAAATA+TGG | + | chr5.1:320688-320707 | None:intergenic | 30.0% | |
| TCTTAATGAGTGGTTATGTT+AGG | + | chr5.1:322484-322503 | None:intergenic | 30.0% | |
| TGCAAACTTCAGTTATATCA+AGG | + | chr5.1:318511-318530 | None:intergenic | 30.0% | |
| TGTAGCATAAACTCAACATA+TGG | - | chr5.1:322010-322029 | MS.gene92355:intron | 30.0% | |
| TGTGTACAATTAAGACAATG+CGG | + | chr5.1:322163-322182 | None:intergenic | 30.0% | |
| TTATTCAAACAGACTCAAAG+GGG | - | chr5.1:322319-322338 | MS.gene92355:intron | 30.0% | |
| TTTGTAATAGTCTTCTGTGT+AGG | + | chr5.1:321052-321071 | None:intergenic | 30.0% | |
| ! | ATCTCCTTTTGTCTTTATAC+AGG | - | chr5.1:318219-318238 | MS.gene92355:CDS | 30.0% |
| ! | ATGCCTTTAATAGAAAGTGT+TGG | + | chr5.1:322652-322671 | None:intergenic | 30.0% |
| ! | CTATCAAATCATTTTGCTTG+AGG | - | chr5.1:323922-323941 | MS.gene92355:CDS | 30.0% |
| ! | GAATAGTCTTGCTTTAATTC+AGG | + | chr5.1:322274-322293 | None:intergenic | 30.0% |
| ! | GAATTCTTTTATCAGCAATC+TGG | + | chr5.1:317986-318005 | None:intergenic | 30.0% |
| ! | GATTTGGTTACATGTAGATA+TGG | - | chr5.1:318037-318056 | MS.gene92355:intron | 30.0% |
| ! | GTATACTTGTTGAAATCAAC+TGG | + | chr5.1:318319-318338 | None:intergenic | 30.0% |
| ! | TGTTGTTGATTGAGATATAC+AGG | + | chr5.1:319062-319081 | None:intergenic | 30.0% |
| ! | TTTCTATTAAAGGCATGTCT+CGG | - | chr5.1:322656-322675 | MS.gene92355:intron | 30.0% |
| !! | ATTGATAGTGTTGACAGATT+GGG | - | chr5.1:319609-319628 | MS.gene92355:intron | 30.0% |
| !! | CGTATTTTGAAGGAAGTTTT+TGG | - | chr5.1:319653-319672 | MS.gene92355:intron | 30.0% |
| !! | GAAGAGATAAATTTGTTGGA+AGG | - | chr5.1:323526-323545 | MS.gene92355:CDS | 30.0% |
| !! | TTTGAAATTAGCTTTCCCTT+TGG | - | chr5.1:323816-323835 | MS.gene92355:intron | 30.0% |
| !!! | GCAGATTTTTTTTACTCTGT+GGG | - | chr5.1:319997-320016 | MS.gene92355:CDS | 30.0% |
| !!! | TGCAGATTTTTTTTACTCTG+TGG | - | chr5.1:319996-320015 | MS.gene92355:CDS | 30.0% |
| !!! | TTTTTTTACTCTGTGGGTTT+AGG | - | chr5.1:320003-320022 | MS.gene92355:CDS | 30.0% |
| AAAAGGTAACTGGCACAATT+AGG | + | chr5.1:319012-319031 | None:intergenic | 35.0% | |
| AAAGCAAGACTATTCGAACA+AGG | - | chr5.1:322279-322298 | MS.gene92355:intron | 35.0% | |
| AACAAATTTATCTCTTCCCC+TGG | + | chr5.1:323523-323542 | None:intergenic | 35.0% | |
| AACCACATACAATGCAAAAC+AGG | + | chr5.1:319192-319211 | None:intergenic | 35.0% | |
| AAGCAAGACTATTCGAACAA+GGG | - | chr5.1:322280-322299 | MS.gene92355:intron | 35.0% | |
| AATGAGTGGTTATGTTAGGT+AGG | + | chr5.1:322480-322499 | None:intergenic | 35.0% | |
| ACCACATACAATGCAAAACA+GGG | + | chr5.1:319191-319210 | None:intergenic | 35.0% | |
| ACCCATATGGGAAATATGTT+TGG | + | chr5.1:318749-318768 | None:intergenic | 35.0% | |
| ACCCTACAAGGATAAAAACT+GGG | - | chr5.1:323441-323460 | MS.gene92355:CDS | 35.0% | |
| ACTAGCAAATGTAACCCATA+TGG | + | chr5.1:318762-318781 | None:intergenic | 35.0% | |
| ACTGGAACAAAGATTAACTC+TGG | + | chr5.1:318301-318320 | None:intergenic | 35.0% | |
| AGAAAAATAAGGGTGGAGAA+TGG | + | chr5.1:321292-321311 | None:intergenic | 35.0% | |
| AGCGCTGTTGCATAAAAAAT+TGG | - | chr5.1:320107-320126 | MS.gene92355:CDS | 35.0% | |
| AGGGGAAGAGATAAATTTGT+TGG | - | chr5.1:323522-323541 | MS.gene92355:CDS | 35.0% | |
| ATAACACTAAAAGGGGTGAT+TGG | - | chr5.1:319121-319140 | MS.gene92355:intron | 35.0% | |
| ATCCACAGATATGCAAAAAG+AGG | - | chr5.1:320434-320453 | MS.gene92355:CDS | 35.0% | |
| ATGAGTGGTTATGTTAGGTA+GGG | + | chr5.1:322479-322498 | None:intergenic | 35.0% | |
| ATTGCAGTTCATCAGTTTGA+AGG | - | chr5.1:320205-320224 | MS.gene92355:intron | 35.0% | |
| ATTGCTCAAGAAATCAGAGT+CGG | - | chr5.1:318642-318661 | MS.gene92355:intron | 35.0% | |
| CAACATATGGCCGTTATTAT+TGG | - | chr5.1:322023-322042 | MS.gene92355:intron | 35.0% | |
| CAATACATAGTTTCGCTTAG+AGG | + | chr5.1:322561-322580 | None:intergenic | 35.0% | |
| CACTAAACTGTGATACTCTA+AGG | + | chr5.1:321003-321022 | None:intergenic | 35.0% | |
| CATGTAACCAAATCCTTGAA+AGG | + | chr5.1:318031-318050 | None:intergenic | 35.0% | |
| CCTATTAATCGTACTGAAAC+AGG | + | chr5.1:320820-320839 | None:intergenic | 35.0% | |
| CCTGTTTCAGTACGATTAAT+AGG | - | chr5.1:320817-320836 | MS.gene92355:CDS | 35.0% | |
| CTAGCAAATGTAACCCATAT+GGG | + | chr5.1:318761-318780 | None:intergenic | 35.0% | |
| CTTACAAACATGCCAAATAC+TGG | + | chr5.1:319862-319881 | None:intergenic | 35.0% | |
| GACATCTCTTAAACAAGATC+TGG | + | chr5.1:322381-322400 | None:intergenic | 35.0% | |
| GACTATAAATGTTCACTCTG+TGG | - | chr5.1:321606-321625 | MS.gene92355:intron | 35.0% | |
| GAGATGTTAAGAGAGAATTG+AGG | + | chr5.1:318990-319009 | None:intergenic | 35.0% | |
| GATTATACATCTCACAGACA+AGG | - | chr5.1:323205-323224 | MS.gene92355:intron | 35.0% | |
| GCACCAACACTTTCTATTAA+AGG | - | chr5.1:322646-322665 | MS.gene92355:intron | 35.0% | |
| GCCAAACATATTTCCCATAT+GGG | - | chr5.1:318745-318764 | MS.gene92355:intron | 35.0% | |
| GCGCTGTTGCATAAAAAATT+GGG | - | chr5.1:320108-320127 | MS.gene92355:CDS | 35.0% | |
| GCTACTTAGAAAAATAAGGG+TGG | + | chr5.1:321299-321318 | None:intergenic | 35.0% | |
| GGAGTAATCAAAGCTTATGA+TGG | - | chr5.1:321984-322003 | MS.gene92355:intron | 35.0% | |
| GGGGAAATGAAATACTTAGT+TGG | + | chr5.1:323623-323642 | None:intergenic | 35.0% | |
| GGTAAAACATACTGTCCATT+TGG | + | chr5.1:319408-319427 | None:intergenic | 35.0% | |
| GTAATCAAAGCTTATGATGG+TGG | - | chr5.1:321987-322006 | MS.gene92355:intron | 35.0% | |
| GTCTCAGATTTAGTCAGTTT+AGG | - | chr5.1:320254-320273 | MS.gene92355:intron | 35.0% | |
| GTTATGCACCAACTTAAACA+AGG | + | chr5.1:320954-320973 | None:intergenic | 35.0% | |
| GTTTATCTTTCAGGGAATTC+CGG | - | chr5.1:320151-320170 | MS.gene92355:intron | 35.0% | |
| TAACACTAAAAGGGGTGATT+GGG | - | chr5.1:319122-319141 | MS.gene92355:intron | 35.0% | |
| TAATAAGGACATGAGCAGAA+TGG | + | chr5.1:322590-322609 | None:intergenic | 35.0% | |
| TACAGTGATTTGACCAGAAA+AGG | - | chr5.1:318343-318362 | MS.gene92355:CDS | 35.0% | |
| TACTGTTGGTGCAAAAATGA+TGG | - | chr5.1:322943-322962 | MS.gene92355:intron | 35.0% | |
| TAGTGATTGTTTGATCACCT+GGG | - | chr5.1:319313-319332 | MS.gene92355:intron | 35.0% | |
| TCAGACATAAACAAGCCAAA+TGG | - | chr5.1:319390-319409 | MS.gene92355:intron | 35.0% | |
| TCATAGTATGAAATTTCCCC+AGG | + | chr5.1:319333-319352 | None:intergenic | 35.0% | |
| TGATGGAAAACAAAAAGGGA+CGG | - | chr5.1:322960-322979 | MS.gene92355:intron | 35.0% | |
| TGCCAAACATATTTCCCATA+TGG | - | chr5.1:318744-318763 | MS.gene92355:intron | 35.0% | |
| TGGTTTCTACAACCAGTATT+TGG | - | chr5.1:319847-319866 | MS.gene92355:CDS | 35.0% | |
| TGTTAGGTAGGGAAGATTAA+CGG | + | chr5.1:322468-322487 | None:intergenic | 35.0% | |
| TTATGTCTGAGCAAACCTAT+AGG | + | chr5.1:319380-319399 | None:intergenic | 35.0% | |
| TTTATACAGGCCAGGAAATT+TGG | - | chr5.1:318232-318251 | MS.gene92355:CDS | 35.0% | |
| ! | ACTGAAAACTGCTTCTTTTG+AGG | - | chr5.1:320485-320504 | MS.gene92355:CDS | 35.0% |
| ! | ACTTTTCCGAAATCTTGCTT+GGG | + | chr5.1:320049-320068 | None:intergenic | 35.0% |
| ! | ATCCTCTTTTTGCATATCTG+TGG | + | chr5.1:320439-320458 | None:intergenic | 35.0% |
| ! | CAGCAATCGAATGATTGTTT+TGG | - | chr5.1:321344-321363 | MS.gene92355:intron | 35.0% |
| ! | CATGTGTTCCTTGTTTAAGT+TGG | - | chr5.1:320943-320962 | MS.gene92355:intron | 35.0% |
| ! | CTTAGAGTATCACAGTTTAG+TGG | - | chr5.1:321001-321020 | MS.gene92355:intron | 35.0% |
| ! | GGAAATGATAATGTTGTGGT+TGG | - | chr5.1:321581-321600 | MS.gene92355:intron | 35.0% |
| ! | GTAGCATGCATGAAGTTTTA+AGG | - | chr5.1:322131-322150 | MS.gene92355:CDS | 35.0% |
| ! | GTCAGGAAATGATAATGTTG+TGG | - | chr5.1:321577-321596 | MS.gene92355:intron | 35.0% |
| ! | TAATGAAGCTTTATCCACAG+AGG | + | chr5.1:320584-320603 | None:intergenic | 35.0% |
| ! | TACTTTTCCGAAATCTTGCT+TGG | + | chr5.1:320050-320069 | None:intergenic | 35.0% |
| ! | TCCCAGTTTTTATCCTTGTA+GGG | + | chr5.1:323445-323464 | None:intergenic | 35.0% |
| ! | TGACAGTTGTTTCATTCAAC+AGG | + | chr5.1:323744-323763 | None:intergenic | 35.0% |
| ! | TGACTTCACATTTTCTCGTA+AGG | - | chr5.1:321828-321847 | MS.gene92355:intron | 35.0% |
| ! | TGTATGAACATTAGTCTAGC+TGG | + | chr5.1:319800-319819 | None:intergenic | 35.0% |
| ! | TTCTCAGTTTGAGTTTCACT+AGG | + | chr5.1:323564-323583 | None:intergenic | 35.0% |
| ! | TTGACATTTTGCTCTCCTAT+AGG | - | chr5.1:319362-319381 | MS.gene92355:intron | 35.0% |
| !! | AAATATCGGTATTGACGTGT+TGG | - | chr5.1:322854-322873 | MS.gene92355:intron | 35.0% |
| !! | ATGATTTGTTCAAGTCCCTT+GGG | - | chr5.1:320622-320641 | MS.gene92355:intron | 35.0% |
| !! | ATTTTTGTGATGGGGATGTT+GGG | - | chr5.1:322618-322637 | MS.gene92355:intron | 35.0% |
| !! | GATAAATTTGTTGGAAGGCA+AGG | - | chr5.1:323531-323550 | MS.gene92355:CDS | 35.0% |
| !! | GATTGATAGTGTTGACAGAT+TGG | - | chr5.1:319608-319627 | MS.gene92355:intron | 35.0% |
| !! | GGTTACTGAACGTATTTTGA+AGG | - | chr5.1:319643-319662 | MS.gene92355:intron | 35.0% |
| !! | TACTTCTTGTTGTTGTGAGA+TGG | + | chr5.1:322403-322422 | None:intergenic | 35.0% |
| !! | TATGATTTGTTCAAGTCCCT+TGG | - | chr5.1:320621-320640 | MS.gene92355:intron | 35.0% |
| !! | TTCCTTTTGAAGAAGCAACT+CGG | + | chr5.1:321691-321710 | None:intergenic | 35.0% |
| !! | TTGATAGTGTTGACAGATTG+GGG | - | chr5.1:319610-319629 | MS.gene92355:intron | 35.0% |
| !!! | ATGATTGTTTTGGCTGATTG+AGG | - | chr5.1:321354-321373 | MS.gene92355:intron | 35.0% |
| !!! | CATGTTCGTTAGTTTTTCAG+AGG | - | chr5.1:318444-318463 | MS.gene92355:intron | 35.0% |
| AAACCACGACAAATGGTAAG+AGG | + | chr5.1:321764-321783 | None:intergenic | 40.0% | |
| AACAGACCTTTCTGATAGGA+AGG | + | chr5.1:319467-319486 | None:intergenic | 40.0% | |
| AAGCAGCAATCCATACCATT+TGG | - | chr5.1:323384-323403 | MS.gene92355:intron | 40.0% | |
| AAGCATCTGTTCCGATTCAA+AGG | - | chr5.1:321727-321746 | MS.gene92355:intron | 40.0% | |
| AAGTAACGCATGTGGATGTA+AGG | + | chr5.1:318811-318830 | None:intergenic | 40.0% | |
| AATCGTGTTTCTTCCAGTCA+GGG | - | chr5.1:321865-321884 | MS.gene92355:CDS | 40.0% | |
| ACAGACCTTTCTGATAGGAA+GGG | + | chr5.1:319466-319485 | None:intergenic | 40.0% | |
| ACATAACACATATCCCCCAA+GGG | + | chr5.1:320640-320659 | None:intergenic | 40.0% | |
| ACCTTAGCAAGTAAGCGATT+CGG | + | chr5.1:318711-318730 | None:intergenic | 40.0% | |
| ACTGCACTTGCACATTAATC+AGG | - | chr5.1:318891-318910 | MS.gene92355:intron | 40.0% | |
| AGAAAGGAAAGAAAGGAAGG+AGG | - | chr5.1:323357-323376 | MS.gene92355:intron | 40.0% | |
| AGAACGAACTCCAAATTTCC+TGG | + | chr5.1:318245-318264 | None:intergenic | 40.0% | |
| AGACTACCAGCGATGAAATT+CGG | + | chr5.1:318476-318495 | None:intergenic | 40.0% | |
| AGGGAAGATTAACGGTAAGT+CGG | + | chr5.1:322460-322479 | None:intergenic | 40.0% | |
| AGTGAATGTACAGAGGTTCT+GGG | - | chr5.1:321471-321490 | MS.gene92355:CDS | 40.0% | |
| AGTGATTGTTTGATCACCTG+GGG | - | chr5.1:319314-319333 | MS.gene92355:intron | 40.0% | |
| AGTTTAACCATCGTCCAGAA+AGG | - | chr5.1:323341-323360 | MS.gene92355:intron | 40.0% | |
| ATACCTCTTACCATTTGTCG+TGG | - | chr5.1:321758-321777 | MS.gene92355:intron | 40.0% | |
| ATAGTCTTCTGTGTAGGATC+AGG | + | chr5.1:321046-321065 | None:intergenic | 40.0% | |
| ATCGTCCAGAAAGGAAAGAA+AGG | - | chr5.1:323350-323369 | MS.gene92355:intron | 40.0% | |
| ATGCAAAAAGAGGATCTGCA+TGG | - | chr5.1:320444-320463 | MS.gene92355:CDS | 40.0% | |
| ATTACCAAAGCTCCACTCTT+CGG | - | chr5.1:321236-321255 | MS.gene92355:intron | 40.0% | |
| ATTCTCCCCAAGCAAGATTT+CGG | - | chr5.1:320040-320059 | MS.gene92355:CDS | 40.0% | |
| CAACCTGATAAATACAGCAG+AGG | + | chr5.1:321416-321435 | None:intergenic | 40.0% | |
| CACATACAACAGACATGACA+CGG | + | chr5.1:322883-322902 | None:intergenic | 40.0% | |
| CACCCTACAAGGATAAAAAC+TGG | - | chr5.1:323440-323459 | MS.gene92355:CDS | 40.0% | |
| CAGCAAGAACCCTCTTATAT+TGG | + | chr5.1:320896-320915 | None:intergenic | 40.0% | |
| CTCAAACAGACCTTTCTGAT+AGG | + | chr5.1:319471-319490 | None:intergenic | 40.0% | |
| CTCTGCTGTATTTATCAGGT+TGG | - | chr5.1:321414-321433 | MS.gene92355:intron | 40.0% | |
| CTGCAAACATAAGCTTTGCA+TGG | + | chr5.1:320395-320414 | None:intergenic | 40.0% | |
| CTGGCCTGTATAAAGACAAA+AGG | + | chr5.1:318226-318245 | None:intergenic | 40.0% | |
| CTTTCCTCAACAAAACTTGG+AGG | + | chr5.1:321642-321661 | None:intergenic | 40.0% | |
| GAAACTGATCTTTCCCTTGA+CGG | - | chr5.1:321151-321170 | MS.gene92355:CDS | 40.0% | |
| GAAAGACCTTCATTCACAGA+AGG | - | chr5.1:323142-323161 | MS.gene92355:intron | 40.0% | |
| GAAGCAAAAGTTGTCTCACA+AGG | - | chr5.1:321924-321943 | MS.gene92355:CDS | 40.0% | |
| GACGAAGGAAACCTCATAAT+TGG | + | chr5.1:318153-318172 | None:intergenic | 40.0% | |
| GATATCCACTGCCAATTATG+AGG | - | chr5.1:318139-318158 | MS.gene92355:CDS | 40.0% | |
| GCTTTGCATGGTTCATTTGT+TGG | + | chr5.1:320383-320402 | None:intergenic | 40.0% | |
| GGATAAAAACTGGGAGAATC+AGG | - | chr5.1:323450-323469 | MS.gene92355:CDS | 40.0% | |
| GTAGTGATTGTTTGATCACC+TGG | - | chr5.1:319312-319331 | MS.gene92355:intron | 40.0% | |
| GTGAAACTCAAACTGAGAAG+TGG | - | chr5.1:323565-323584 | MS.gene92355:CDS | 40.0% | |
| TAACCACAGTGAATGTACAG+AGG | - | chr5.1:321464-321483 | MS.gene92355:CDS | 40.0% | |
| TAATCGTGTTTCTTCCAGTC+AGG | - | chr5.1:321864-321883 | MS.gene92355:CDS | 40.0% | |
| TATACATCTCACAGACAAGG+TGG | - | chr5.1:323208-323227 | MS.gene92355:intron | 40.0% | |
| TATGATCCGAATTTCATCGC+TGG | - | chr5.1:318467-318486 | MS.gene92355:intron | 40.0% | |
| TATGTAACCTCTAAGCTGCT+AGG | - | chr5.1:322083-322102 | MS.gene92355:intron | 40.0% | |
| TCAACAACAGTTGCCCAATT+TGG | - | chr5.1:319073-319092 | MS.gene92355:intron | 40.0% | |
| TCATCTGCAAATTGCTTCTC+AGG | + | chr5.1:323415-323434 | None:intergenic | 40.0% | |
| TCCAGAAAGGAAAGAAAGGA+AGG | - | chr5.1:323354-323373 | MS.gene92355:intron | 40.0% | |
| TCCTCAAGGCCAATATAAGA+GGG | - | chr5.1:320884-320903 | MS.gene92355:intron | 40.0% | |
| TCCTTCCTTTCTTTCCTTTC+TGG | + | chr5.1:323358-323377 | None:intergenic | 40.0% | |
| TCTCTTCCTTCTGTGAATGA+AGG | + | chr5.1:323151-323170 | None:intergenic | 40.0% | |
| TGAAAGTCATAACAGCCAAG+CGG | + | chr5.1:319437-319456 | None:intergenic | 40.0% | |
| TGATAGGCCTAATTCTTGTC+AGG | - | chr5.1:321560-321579 | MS.gene92355:CDS | 40.0% | |
| TGCAAAAAGAGGATCTGCAT+GGG | - | chr5.1:320445-320464 | MS.gene92355:CDS | 40.0% | |
| TGCAAAGCTTATGTTTGCAG+CGG | - | chr5.1:320395-320414 | MS.gene92355:CDS | 40.0% | |
| TGGGATCAACTTCTTTCCAA+GGG | - | chr5.1:321490-321509 | MS.gene92355:CDS | 40.0% | |
| TGTCCTCTGCTGTATTTATC+AGG | - | chr5.1:321410-321429 | MS.gene92355:intron | 40.0% | |
| TTACTTCAGGAGAAGCCAAT+TGG | - | chr5.1:321077-321096 | MS.gene92355:intron | 40.0% | |
| TTCCCAAACATCAAGCTGAA+GGG | - | chr5.1:323120-323139 | MS.gene92355:intron | 40.0% | |
| TTCCCTTCAGCTTGATGTTT+GGG | + | chr5.1:323125-323144 | None:intergenic | 40.0% | |
| TTTCCCTTCAGCTTGATGTT+TGG | + | chr5.1:323126-323145 | None:intergenic | 40.0% | |
| TTTCTGGACGATGGTTAAAC+TGG | + | chr5.1:323342-323361 | None:intergenic | 40.0% | |
| TTTCTTTCCTTTCTGGACGA+TGG | + | chr5.1:323351-323370 | None:intergenic | 40.0% | |
| TTTGAATCGGAACAGATGCT+TGG | + | chr5.1:321728-321747 | None:intergenic | 40.0% | |
| ! | AGTTCTAATGCCGAAAATGG+AGG | - | chr5.1:322994-323013 | MS.gene92355:intron | 40.0% |
| ! | CAGGTTTTGCGTCAATAGAA+AGG | - | chr5.1:323469-323488 | MS.gene92355:CDS | 40.0% |
| ! | CAGTTTAGTGGACAAAAGTG+TGG | - | chr5.1:321013-321032 | MS.gene92355:intron | 40.0% |
| ! | CTCCCAGTTTTTATCCTTGT+AGG | + | chr5.1:323446-323465 | None:intergenic | 40.0% |
| ! | CTTTTCCGAAATCTTGCTTG+GGG | + | chr5.1:320048-320067 | None:intergenic | 40.0% |
| ! | CTTTTGTCTTTATACAGGCC+AGG | - | chr5.1:318224-318243 | MS.gene92355:CDS | 40.0% |
| ! | GATAGCAGAGATCCTTTTGA+TGG | - | chr5.1:321193-321212 | MS.gene92355:intron | 40.0% |
| ! | GTGAGACAACTTTTGCTTCT+TGG | + | chr5.1:321923-321942 | None:intergenic | 40.0% |
| ! | TACTCTGTGGGTTTAGGTTT+GGG | - | chr5.1:320009-320028 | MS.gene92355:CDS | 40.0% |
| ! | TCCATTTTCGGCATTAGAAC+TGG | + | chr5.1:322995-323014 | None:intergenic | 40.0% |
| ! | TCCCTGTTTTGCATTGTATG+TGG | - | chr5.1:319187-319206 | MS.gene92355:intron | 40.0% |
| ! | TGCGTCAATAGAAAGGCATA+GGG | - | chr5.1:323476-323495 | MS.gene92355:CDS | 40.0% |
| ! | TGTTTTACCAAATGACCGCT+TGG | - | chr5.1:319419-319438 | MS.gene92355:intron | 40.0% |
| ! | TTACTCTGTGGGTTTAGGTT+TGG | - | chr5.1:320008-320027 | MS.gene92355:CDS | 40.0% |
| ! | TTGCGTCAATAGAAAGGCAT+AGG | - | chr5.1:323475-323494 | MS.gene92355:CDS | 40.0% |
| !! | GATTTTTGTGATGGGGATGT+TGG | - | chr5.1:322617-322636 | MS.gene92355:intron | 40.0% |
| !! | GGAAAAGTATCAGCAATGAG+AGG | - | chr5.1:320061-320080 | MS.gene92355:CDS | 40.0% |
| !! | TGATAGTGTTGACAGATTGG+GGG | - | chr5.1:319611-319630 | MS.gene92355:intron | 40.0% |
| !! | TGATTTGTTCAAGTCCCTTG+GGG | - | chr5.1:320623-320642 | MS.gene92355:intron | 40.0% |
| !! | TGCAGTTTGTTACACATGCA+TGG | - | chr5.1:320278-320297 | MS.gene92355:intron | 40.0% |
| !!! | ACTTCCTCCAAGTTTTGTTG+AGG | - | chr5.1:321635-321654 | MS.gene92355:intron | 40.0% |
| !!! | CTTTTTTCTCAGTCAACAGC+AGG | - | chr5.1:319725-319744 | MS.gene92355:intron | 40.0% |
| AAGCGTAGAAGTAACGCATG+TGG | + | chr5.1:318819-318838 | None:intergenic | 45.0% | |
| AATTAGGCCTATCATCCTCC+AGG | + | chr5.1:321554-321573 | None:intergenic | 45.0% | |
| ACAACTGTCACATTCAGCAG+AGG | - | chr5.1:323754-323773 | MS.gene92355:intron | 45.0% | |
| ACCTGCATTCAGGAAGAAGA+AGG | - | chr5.1:323276-323295 | MS.gene92355:CDS | 45.0% | |
| ACCTTCTTCTTCCTGAATGC+AGG | + | chr5.1:323280-323299 | None:intergenic | 45.0% | |
| AGAAAGTCACTGTCGCAACT+AGG | + | chr5.1:319546-319565 | None:intergenic | 45.0% | |
| ATAACAGCCAAGCGGTCATT+TGG | + | chr5.1:319429-319448 | None:intergenic | 45.0% | |
| ATCCTCCCTTCCTATCAGAA+AGG | - | chr5.1:319458-319477 | MS.gene92355:intron | 45.0% | |
| ATGTGAGCAGATGCTGGATA+AGG | - | chr5.1:319685-319704 | MS.gene92355:CDS | 45.0% | |
| CACATAACACATATCCCCCA+AGG | + | chr5.1:320641-320660 | None:intergenic | 45.0% | |
| CACATTCAGCAGAGGTTATC+TGG | - | chr5.1:323762-323781 | MS.gene92355:intron | 45.0% | |
| CAGTGAATGTACAGAGGTTC+TGG | - | chr5.1:321470-321489 | MS.gene92355:CDS | 45.0% | |
| CATTGACACATGTCAGACAC+TGG | + | chr5.1:322780-322799 | None:intergenic | 45.0% | |
| CTAATCTCCTGGAGGATGAT+AGG | - | chr5.1:321544-321563 | MS.gene92355:CDS | 45.0% | |
| CTGGGATCAACTTCTTTCCA+AGG | - | chr5.1:321489-321508 | MS.gene92355:CDS | 45.0% | |
| CTTCCCAAACATCAAGCTGA+AGG | - | chr5.1:323119-323138 | MS.gene92355:intron | 45.0% | |
| CTTGGGGGATATGTGTTATG+TGG | - | chr5.1:320639-320658 | MS.gene92355:intron | 45.0% | |
| GAACCTCTGTACATTCACTG+TGG | + | chr5.1:321470-321489 | None:intergenic | 45.0% | |
| GAAGAAGCAACTCGGCAAAA+TGG | + | chr5.1:321683-321702 | None:intergenic | 45.0% | |
| GAATTTCATCGCTGGTAGTC+TGG | - | chr5.1:318475-318494 | MS.gene92355:intron | 45.0% | |
| GATCTCTAGCATGCTGATGA+TGG | + | chr5.1:323722-323741 | None:intergenic | 45.0% | |
| GCTCTAGCAGTGAGAGATTT+GGG | - | chr5.1:322109-322128 | MS.gene92355:intron | 45.0% | |
| GGAAACCTCATAATTGGCAG+TGG | + | chr5.1:318147-318166 | None:intergenic | 45.0% | |
| GGCAATTAAGATGGTCCTCA+AGG | - | chr5.1:320870-320889 | MS.gene92355:intron | 45.0% | |
| GGCAGTGGATATCATAGACA+TGG | + | chr5.1:318132-318151 | None:intergenic | 45.0% | |
| GTAACCCTATGTTAAAGGGC+AGG | - | chr5.1:318090-318109 | MS.gene92355:intron | 45.0% | |
| GTCCTCAAGGCCAATATAAG+AGG | - | chr5.1:320883-320902 | MS.gene92355:intron | 45.0% | |
| TATGTTAAAGGGCAGGCCAA+TGG | - | chr5.1:318097-318116 | MS.gene92355:intron | 45.0% | |
| TCAGGTCTGTCCAAATGGTA+TGG | + | chr5.1:323397-323416 | None:intergenic | 45.0% | |
| TCCACTCTTCGGAAAACTGA+TGG | - | chr5.1:321247-321266 | MS.gene92355:intron | 45.0% | |
| TCTTTCCAAGGGCAGTTTGA+GGG | - | chr5.1:321501-321520 | MS.gene92355:CDS | 45.0% | |
| TGCCGAGTTGCTTCTTCAAA+AGG | - | chr5.1:321686-321705 | MS.gene92355:intron | 45.0% | |
| TGCTCTAGCAGTGAGAGATT+TGG | - | chr5.1:322108-322127 | MS.gene92355:intron | 45.0% | |
| TGGAAAACAAAAAGGGACGG+CGG | - | chr5.1:322963-322982 | MS.gene92355:intron | 45.0% | |
| TGGGAAGCGATGATAATCGA+TGG | - | chr5.1:317649-317668 | MS.gene92355:CDS | 45.0% | |
| TGTGAGCAGATGCTGGATAA+GGG | - | chr5.1:319686-319705 | MS.gene92355:intron | 45.0% | |
| TTAACGTCTCCTGAATCCAC+TGG | + | chr5.1:323304-323323 | None:intergenic | 45.0% | |
| TTACTTCTACGCTTGCCACT+TGG | - | chr5.1:318825-318844 | MS.gene92355:intron | 45.0% | |
| TTCTTTCCAAGGGCAGTTTG+AGG | - | chr5.1:321500-321519 | MS.gene92355:CDS | 45.0% | |
| TTGGCCTGCCCTTTAACATA+GGG | + | chr5.1:318097-318116 | None:intergenic | 45.0% | |
| ! | AAACAGACTCAAAGGGGTGT+GGG | - | chr5.1:322325-322344 | MS.gene92355:intron | 45.0% |
| ! | AAGAAGGTTCCAGTGGATTC+AGG | - | chr5.1:323292-323311 | MS.gene92355:CDS | 45.0% |
| ! | ACCATCAGTTTTCCGAAGAG+TGG | + | chr5.1:321251-321270 | None:intergenic | 45.0% |
| ! | ACCGAATCGCTTACTTGCTA+AGG | - | chr5.1:318707-318726 | MS.gene92355:intron | 45.0% |
| ! | ATTGGCCTGCCCTTTAACAT+AGG | + | chr5.1:318098-318117 | None:intergenic | 45.0% |
| ! | GAAAACTGATGGTGCAGAGA+AGG | - | chr5.1:321258-321277 | MS.gene92355:intron | 45.0% |
| ! | GATTTGTTCAAGTCCCTTGG+GGG | - | chr5.1:320624-320643 | MS.gene92355:intron | 45.0% |
| ! | GCCAGTTCTAATGCCGAAAA+TGG | - | chr5.1:322991-323010 | MS.gene92355:intron | 45.0% |
| ! | GCGTCAATAGAAAGGCATAG+GGG | - | chr5.1:323477-323496 | MS.gene92355:CDS | 45.0% |
| ! | GGGTTTAGGTTTGGGAAAGA+CGG | - | chr5.1:320017-320036 | MS.gene92355:CDS | 45.0% |
| ! | TTTTCCGAAGAGTGGAGCTT+TGG | + | chr5.1:321243-321262 | None:intergenic | 45.0% |
| ! | TTTTTCCCTCAAACTGCCCT+TGG | + | chr5.1:321509-321528 | None:intergenic | 45.0% |
| !! | ACCCTCTTATATTGGCCTTG+AGG | + | chr5.1:320888-320907 | None:intergenic | 45.0% |
| !! | GAATAACGGGTCTAATCTCC+TGG | - | chr5.1:321533-321552 | MS.gene92355:CDS | 45.0% |
| !! | GTGATACTCTAAGGCCTAAG+AGG | + | chr5.1:320994-321013 | None:intergenic | 45.0% |
| !!! | TCATTTTTTTAAAATTTTAT+TGG | - | chr5.1:322722-322741 | MS.gene92355:intron | 5.0% |
| AAGCACATGTGAGCAGATGC+TGG | - | chr5.1:319679-319698 | MS.gene92355:CDS | 50.0% | |
| AAGCTTCTCGCGACCTTTCA+AGG | - | chr5.1:318015-318034 | MS.gene92355:intron | 50.0% | |
| ACAATCAACCTCCTACCTCG+AGG | - | chr5.1:323248-323267 | MS.gene92355:CDS | 50.0% | |
| AGCTGAGGAGAATCTGCACA+AGG | - | chr5.1:323064-323083 | MS.gene92355:CDS | 50.0% | |
| AGCTTCCGTGCAATAAACCC+AGG | + | chr5.1:318274-318293 | None:intergenic | 50.0% | |
| ATCTGTGTGCCTACCGTCAA+GGG | + | chr5.1:321167-321186 | None:intergenic | 50.0% | |
| ATGCAACAGCGCTTCATCCT+CGG | + | chr5.1:320100-320119 | None:intergenic | 50.0% | |
| ATGCTGGCAATGGCAATTCC+AGG | - | chr5.1:323502-323521 | MS.gene92355:CDS | 50.0% | |
| CAAACAGACTCAAAGGGGTG+TGG | - | chr5.1:322324-322343 | MS.gene92355:intron | 50.0% | |
| CAGGAAGAAGAAGGTTCCAG+TGG | - | chr5.1:323285-323304 | MS.gene92355:CDS | 50.0% | |
| CCATGCCTGGGTTTATTGCA+CGG | - | chr5.1:318266-318285 | MS.gene92355:CDS | 50.0% | |
| CGAGGAAAAGACCTGCATTC+AGG | - | chr5.1:323266-323285 | MS.gene92355:CDS | 50.0% | |
| CTCGCGACCTTTCAAGGATT+TGG | - | chr5.1:318021-318040 | MS.gene92355:intron | 50.0% | |
| CTGATCTTTCCCTTGACGGT+AGG | - | chr5.1:321155-321174 | MS.gene92355:CDS | 50.0% | |
| CTGTATCAGCGACAAAGTCG+TGG | + | chr5.1:321132-321151 | None:intergenic | 50.0% | |
| GACCACTCTGCGCTAAATGA+AGG | + | chr5.1:323865-323884 | None:intergenic | 50.0% | |
| GACCTTTCTGATAGGAAGGG+AGG | + | chr5.1:319463-319482 | None:intergenic | 50.0% | |
| GAGCAATCCTAGCAGCTTAG+AGG | + | chr5.1:322093-322112 | None:intergenic | 50.0% | |
| GCTTCTCAGGTCTGTCCAAA+TGG | + | chr5.1:323402-323421 | None:intergenic | 50.0% | |
| GGAGAATCTGCACAAGGATG+TGG | - | chr5.1:323070-323089 | MS.gene92355:CDS | 50.0% | |
| GGTGCAATGCATGAGACTGA+CGG | + | chr5.1:323029-323048 | None:intergenic | 50.0% | |
| GTCAGACACTGGACACAACA+TGG | + | chr5.1:322769-322788 | None:intergenic | 50.0% | |
| GTCGGCGTTTATGAAGAGAC+TGG | - | chr5.1:318660-318679 | MS.gene92355:intron | 50.0% | |
| GTTTACACTAGCGCGAAAGC+AGG | - | chr5.1:317687-317706 | MS.gene92355:CDS | 50.0% | |
| TGCCTTCATTTAGCGCAGAG+TGG | - | chr5.1:323860-323879 | MS.gene92355:CDS | 50.0% | |
| TGCTGGCAATGGCAATTCCA+GGG | - | chr5.1:323503-323522 | MS.gene92355:CDS | 50.0% | |
| ! | ACTGGTCTCACATGTAGTGC+TGG | - | chr5.1:318678-318697 | MS.gene92355:intron | 50.0% |
| ! | AGATGACAGAGCACCCTACA+AGG | - | chr5.1:323429-323448 | MS.gene92355:intron | 50.0% |
| ! | GAATGCAGGTCTTTTCCTCG+AGG | + | chr5.1:323266-323285 | None:intergenic | 50.0% |
| ! | GCGTCTGTGACCTCCATTTT+CGG | + | chr5.1:323007-323026 | None:intergenic | 50.0% |
| ! | TAACGGGTCTAATCTCCTGG+AGG | - | chr5.1:321536-321555 | MS.gene92355:CDS | 50.0% |
| ! | TCTCACATGTAGTGCTGGAG+TGG | - | chr5.1:318683-318702 | MS.gene92355:intron | 50.0% |
| ! | TGTTGACAGATTGGGGGCAT+CGG | - | chr5.1:319617-319636 | MS.gene92355:intron | 50.0% |
| ! | TTTGTGATGGGGATGTTGGG+CGG | - | chr5.1:322621-322640 | MS.gene92355:intron | 50.0% |
| !! | CTTTATCCACAGAGGTACCC+AGG | + | chr5.1:320576-320595 | None:intergenic | 50.0% |
| !! | GCTTCAGTCCCTGCTGATTT+AGG | - | chr5.1:323784-323803 | MS.gene92355:intron | 50.0% |
| !! | TCAGTCCCTGCTGATTTAGG+CGG | - | chr5.1:323787-323806 | MS.gene92355:intron | 50.0% |
| AGCGCGAAAGCAGGAATGGA+AGG | - | chr5.1:317696-317715 | MS.gene92355:CDS | 55.0% | |
| CACTAGCGCGAAAGCAGGAA+TGG | - | chr5.1:317692-317711 | MS.gene92355:CDS | 55.0% | |
| CATAGGGGCAATGCTGGCAA+TGG | - | chr5.1:323492-323511 | MS.gene92355:CDS | 55.0% | |
| CCGTGCAATAAACCCAGGCA+TGG | + | chr5.1:318269-318288 | None:intergenic | 55.0% | |
| CCTGTCCGCCTAAATCAGCA+GGG | + | chr5.1:323795-323814 | None:intergenic | 55.0% | |
| GAGTTCGTTCTGCCATGCCT+GGG | - | chr5.1:318254-318273 | MS.gene92355:CDS | 55.0% | |
| GATCTGTGTGCCTACCGTCA+AGG | + | chr5.1:321168-321187 | None:intergenic | 55.0% | |
| GCTGGCAATGGCAATTCCAG+GGG | - | chr5.1:323504-323523 | MS.gene92355:CDS | 55.0% | |
| TCCTGTCCGCCTAAATCAGC+AGG | + | chr5.1:323796-323815 | None:intergenic | 55.0% | |
| ! | GAAAGGCATAGGGGCAATGC+TGG | - | chr5.1:323486-323505 | MS.gene92355:CDS | 55.0% |
| ! | GACATGGTGCCAACAGCCAT+TGG | + | chr5.1:318116-318135 | None:intergenic | 55.0% |
| ! | GCAGGTCTTTTCCTCGAGGT+AGG | + | chr5.1:323262-323281 | None:intergenic | 55.0% |
| ! | GGTCTTTTCCTCGAGGTAGG+AGG | + | chr5.1:323259-323278 | None:intergenic | 55.0% |
| ! | TATTGGCCTGGGTACCTCTG+TGG | - | chr5.1:320567-320586 | MS.gene92355:CDS | 55.0% |
| !! | ACAGATTGGGGGCATCGGTA+AGG | - | chr5.1:319622-319641 | MS.gene92355:intron | 55.0% |
| AAGGGCAGGCCAATGGCTGT+TGG | - | chr5.1:318104-318123 | MS.gene92355:intron | 60.0% | |
| AGCGCAGAGTGGTCTGCAGT+TGG | - | chr5.1:323871-323890 | MS.gene92355:CDS | 60.0% | |
| CAACAGCGCTTCATCCTCGG+TGG | + | chr5.1:320097-320116 | None:intergenic | 60.0% | |
| GGAGTTCGTTCTGCCATGCC+TGG | - | chr5.1:318253-318272 | MS.gene92355:CDS | 60.0% | |
| ! | GAGGACGTTTTCTGCCACCG+AGG | - | chr5.1:320080-320099 | MS.gene92355:CDS | 60.0% |
| ! | TCGGTGCTTCTGACCCTGAC+TGG | + | chr5.1:321881-321900 | None:intergenic | 60.0% |
| !! | CCCTGCTGATTTAGGCGGAC+AGG | - | chr5.1:323792-323811 | MS.gene92355:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 317648 | 323942 | 317648 | ID=MS.gene92355 |
| chr5.1 | mRNA | 317648 | 323942 | 317648 | ID=MS.gene92355.t1;Parent=MS.gene92355 |
| chr5.1 | exon | 323856 | 323942 | 323856 | ID=MS.gene92355.t1.exon1;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 323856 | 323942 | 323856 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 323430 | 323603 | 323430 | ID=MS.gene92355.t1.exon2;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 323430 | 323603 | 323430 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 323226 | 323349 | 323226 | ID=MS.gene92355.t1.exon3;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 323226 | 323349 | 323226 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 323034 | 323134 | 323034 | ID=MS.gene92355.t1.exon4;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 323034 | 323134 | 323034 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 322862 | 322948 | 322862 | ID=MS.gene92355.t1.exon5;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 322862 | 322948 | 322862 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 322111 | 322206 | 322111 | ID=MS.gene92355.t1.exon6;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 322111 | 322206 | 322111 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 321844 | 321964 | 321844 | ID=MS.gene92355.t1.exon7;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 321844 | 321964 | 321844 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 321461 | 321589 | 321461 | ID=MS.gene92355.t1.exon8;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 321461 | 321589 | 321461 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 321084 | 321175 | 321084 | ID=MS.gene92355.t1.exon9;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 321084 | 321175 | 321084 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 320752 | 320863 | 320752 | ID=MS.gene92355.t1.exon10;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 320752 | 320863 | 320752 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 320311 | 320591 | 320311 | ID=MS.gene92355.t1.exon11;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 320311 | 320591 | 320311 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 319842 | 320158 | 319842 | ID=MS.gene92355.t1.exon12;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 319842 | 320158 | 319842 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 319658 | 319704 | 319658 | ID=MS.gene92355.t1.exon13;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 319658 | 319704 | 319658 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 318119 | 318429 | 318119 | ID=MS.gene92355.t1.exon14;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 318119 | 318429 | 318119 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| chr5.1 | exon | 317648 | 317878 | 317648 | ID=MS.gene92355.t1.exon15;Parent=MS.gene92355.t1 |
| chr5.1 | CDS | 317648 | 317878 | 317648 | ID=cds.MS.gene92355.t1;Parent=MS.gene92355.t1 |
| Gene Sequence |
| Protein sequence |
