Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93914.t1 | XP_013455261.1 | 99 | 512 | 5 | 0 | 1 | 512 | 107 | 618 | 4.40E-290 | 1006.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93914.t1 | Q291H5 | 55.8 | 373 | 156 | 2 | 5 | 370 | 130 | 500 | 1.7e-117 | 424.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93914.t1 | A0A072UHZ4 | 99.0 | 512 | 5 | 0 | 1 | 512 | 107 | 618 | 3.2e-290 | 1006.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene93914 | 0.813255 | 2.81E-51 | -1.69E-46 |
| MS.gene049255 | MS.gene93914 | 0.802506 | 5.43E-49 | -1.69E-46 |
| MS.gene049341 | MS.gene93914 | 0.834158 | 3.52E-56 | -1.69E-46 |
| MS.gene049824 | MS.gene93914 | 0.837474 | 5.09E-57 | -1.69E-46 |
| MS.gene049825 | MS.gene93914 | 0.803486 | 3.41E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene93914 | 0.804937 | 1.70E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene93914 | 0.803718 | 3.05E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene93914 | 0.811029 | 8.59E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene93914 | 0.811703 | 6.13E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene93914 | 0.802531 | 5.37E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene93914 | 0.82416 | 9.38E-54 | -1.69E-46 |
| MS.gene05157 | MS.gene93914 | 0.802559 | 5.30E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene93914 | 0.800197 | 1.61E-48 | -1.69E-46 |
| MS.gene052133 | MS.gene93914 | 0.813586 | 2.38E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene93914 | 0.808939 | 2.42E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene93914 | 0.801213 | 1.00E-48 | -1.69E-46 |
| MS.gene052947 | MS.gene93914 | 0.819778 | 9.71E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene93914 | 0.803712 | 3.06E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene93914 | 0.812412 | 4.30E-51 | -1.69E-46 |
| MS.gene053599 | MS.gene93914 | 0.800951 | 1.13E-48 | -1.69E-46 |
| MS.gene05462 | MS.gene93914 | 0.827708 | 1.35E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene93914 | 0.837476 | 5.08E-57 | -1.69E-46 |
| MS.gene055466 | MS.gene93914 | 0.831777 | 1.38E-55 | -1.69E-46 |
| MS.gene055468 | MS.gene93914 | 0.829843 | 4.10E-55 | -1.69E-46 |
| MS.gene055469 | MS.gene93914 | 0.816498 | 5.36E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene93914 | 0.823959 | 1.05E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene93914 | -0.815511 | 8.90E-52 | -1.69E-46 |
| MS.gene055890 | MS.gene93914 | 0.802817 | 4.69E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene93914 | 0.819674 | 1.03E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene93914 | -0.815364 | 9.60E-52 | -1.69E-46 |
| MS.gene057057 | MS.gene93914 | 0.823169 | 1.60E-53 | -1.69E-46 |
| MS.gene058084 | MS.gene93914 | 0.804383 | 2.22E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene93914 | 0.839925 | 1.18E-57 | -1.69E-46 |
| MS.gene060194 | MS.gene93914 | 0.805698 | 1.18E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene93914 | 0.850793 | 1.35E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93914 | MS.gene025347 | PPI |
| MS.gene93914 | MS.gene36348 | PPI |
| MS.gene93914 | MS.gene062116 | PPI |
| MS.gene36347 | MS.gene93914 | PPI |
| MS.gene93914 | MS.gene85342 | PPI |
| MS.gene93914 | MS.gene76530 | PPI |
| MS.gene93914 | MS.gene069865 | PPI |
| MS.gene93914 | MS.gene070139 | PPI |
| MS.gene93914 | MS.gene85146 | PPI |
| MS.gene85145 | MS.gene93914 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93914.t1 | MTR_4g033210 | 99.023 | 512 | 5 | 0 | 1 | 512 | 107 | 618 | 0.0 | 1046 |
| MS.gene93914.t1 | MTR_5g021230 | 24.939 | 413 | 240 | 12 | 15 | 369 | 186 | 586 | 1.29e-26 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93914.t1 | AT1G72090 | 67.647 | 510 | 135 | 5 | 1 | 509 | 119 | 599 | 0.0 | 701 |
| MS.gene93914.t1 | AT4G36390 | 24.823 | 423 | 246 | 14 | 7 | 369 | 207 | 617 | 2.76e-25 | 110 |
Find 103 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTTGATAAGGCTCTTT+TGG | 0.133036 | 4.3:-66915283 | MS.gene93914:CDS |
| CCAATTAATGTTGGTTGTTT+AGG | 0.201753 | 4.3:-66918955 | MS.gene93914:CDS |
| CCTAAACAACCAACATTAAT+TGG | 0.244538 | 4.3:+66918955 | None:intergenic |
| AAGGCAAAGTGGAAAGAATT+TGG | 0.247160 | 4.3:-66916446 | MS.gene93914:CDS |
| GTCTTAGGTTTAGTGTTCTT+TGG | 0.248640 | 4.3:-66915215 | MS.gene93914:CDS |
| TTGCTTTATTAGTTTGTCTT+AGG | 0.260565 | 4.3:-66915230 | MS.gene93914:CDS |
| CTTCTCTTCACCACATTACT+TGG | 0.264756 | 4.3:+66916522 | None:intergenic |
| TTCAAGTGCTCAAGGATAAA+AGG | 0.293438 | 4.3:+66918313 | None:intergenic |
| GATATAATATGTGGATTTCC+AGG | 0.335774 | 4.3:-66918042 | MS.gene93914:intron |
| TTCCCACAAGCACAAGATTC+TGG | 0.347283 | 4.3:+66915504 | None:intergenic |
| TTCTGAGATTTCACAAGTCT+TGG | 0.354694 | 4.3:+66915530 | None:intergenic |
| ACCTGCGGCAAGAATGAAAA+AGG | 0.355796 | 4.3:-66916547 | MS.gene93914:CDS |
| CTGATGGAGTTAAAGAAATA+TGG | 0.362385 | 4.3:-66918651 | MS.gene93914:CDS |
| TTGCCTTCCATCCCAGAGTA+TGG | 0.378724 | 4.3:+66916462 | None:intergenic |
| CTGAACTGGCACATGCAAAA+AGG | 0.379014 | 4.3:+66918252 | None:intergenic |
| CAAAGACATTTGTCAATTCA+CGG | 0.382984 | 4.3:+66916496 | None:intergenic |
| CTGGAAGGGATCAGCATTGT+AGG | 0.383351 | 4.3:-66919237 | MS.gene93914:CDS |
| GAATCATTCACGCCATACTC+TGG | 0.389654 | 4.3:-66916474 | MS.gene93914:CDS |
| AGCTGGTAATTCTGCTACTA+AGG | 0.395120 | 4.3:+66918375 | None:intergenic |
| AAAGGAAGAATCTGCACAAA+AGG | 0.397088 | 4.3:-66915368 | MS.gene93914:CDS |
| GTTGTAGAGGAGACTTTAAA+AGG | 0.399227 | 4.3:-66919186 | MS.gene93914:CDS |
| ACCTTAACTGAGCTTGTGCC+GGG | 0.402416 | 4.3:-66918081 | MS.gene93914:CDS |
| TACAGTGTCCCTTGAATTGT+CGG | 0.404396 | 4.3:+66915443 | None:intergenic |
| CCTTCCCACAGATGTTATCT+TGG | 0.407575 | 4.3:+66915662 | None:intergenic |
| AGATTTCACAAGTCTTGGTT+TGG | 0.413329 | 4.3:+66915535 | None:intergenic |
| CAACAACGCGATCAATTTGC+TGG | 0.415734 | 4.3:+66919211 | None:intergenic |
| AAGCGCTGGCAATGTCTTAC+GGG | 0.416449 | 4.3:+66919143 | None:intergenic |
| AAGAAAGGAGCATGAGAAAG+TGG | 0.418448 | 4.3:-66915308 | MS.gene93914:CDS |
| AATAAACCACTAGTTGTTGC+TGG | 0.419430 | 4.3:-66919294 | MS.gene93914:CDS |
| CAAGCGCTGGCAATGTCTTA+CGG | 0.420275 | 4.3:+66919142 | None:intergenic |
| ACTAAGGCATTCAATAAAGT+TGG | 0.424272 | 4.3:+66918391 | None:intergenic |
| CCCCGGCACAAGCTCAGTTA+AGG | 0.435890 | 4.3:+66918080 | None:intergenic |
| AGCATAGTGCTTGCATCAGC+TGG | 0.438177 | 4.3:+66918358 | None:intergenic |
| TTGAGAAGACCGACAATTCA+AGG | 0.440687 | 4.3:-66915452 | MS.gene93914:CDS |
| AAAGTGGGACTTTGTTGATA+AGG | 0.441838 | 4.3:-66915292 | MS.gene93914:CDS |
| CAATAAAGCTTTGAACAAAC+AGG | 0.443124 | 4.3:-66915592 | MS.gene93914:CDS |
| TTGGATGGATACTGAGGAAA+AGG | 0.450909 | 4.3:-66915386 | MS.gene93914:CDS |
| TTGCATGTGCCAGTTCAGTC+TGG | 0.452847 | 4.3:-66918247 | MS.gene93914:CDS |
| TCACATCTCGACTTCCTTGA+GGG | 0.467101 | 4.3:+66919265 | None:intergenic |
| AGTGAAGATACCGGAGCATA+TGG | 0.472936 | 4.3:-66918622 | MS.gene93914:intron |
| TACCTTAACTGAGCTTGTGC+CGG | 0.473023 | 4.3:-66918082 | MS.gene93914:CDS |
| ATGGATACCATCATAACAAA+AGG | 0.483104 | 4.3:-66919327 | MS.gene93914:CDS |
| GAACTTCCAAGCATATCATC+TGG | 0.486695 | 4.3:+66915693 | None:intergenic |
| GCATCACTTCCAGACTGAAC+TGG | 0.492471 | 4.3:+66918238 | None:intergenic |
| GCAAGCACTATGCTGCGTAT+TGG | 0.495273 | 4.3:-66918349 | MS.gene93914:CDS |
| GATCTGATCTAAAGCAAGAA+AGG | 0.497761 | 4.3:-66915323 | MS.gene93914:CDS |
| CTGAAGGTTGGTCATACAAA+GGG | 0.500724 | 4.3:-66915741 | MS.gene93914:intron |
| CTCAAGGATAAAAGGTGGAT+TGG | 0.509294 | 4.3:+66918321 | None:intergenic |
| TTCACATCTCGACTTCCTTG+AGG | 0.511443 | 4.3:+66919264 | None:intergenic |
| GAGCCAGAATCTTGTGCTTG+TGG | 0.516083 | 4.3:-66915507 | MS.gene93914:CDS |
| AGCCAGAATCTTGTGCTTGT+GGG | 0.517247 | 4.3:-66915506 | MS.gene93914:CDS |
| TGCAACTGATGGAGTTCACT+TGG | 0.521540 | 4.3:-66916412 | MS.gene93914:intron |
| ATTGCCACTGATATAATATG+TGG | 0.524293 | 4.3:-66918051 | MS.gene93914:CDS |
| AATCATTCACGCCATACTCT+GGG | 0.529461 | 4.3:-66916473 | MS.gene93914:CDS |
| AAGTCGAGATGTGAAAGAGC+TGG | 0.532706 | 4.3:-66919256 | MS.gene93914:CDS |
| ATTACTGATATTGCAACTGA+TGG | 0.536300 | 4.3:-66916423 | MS.gene93914:CDS |
| GAACAAACAGGTTCCTACTC+AGG | 0.537765 | 4.3:-66915580 | MS.gene93914:CDS |
| CTTTAAAAGGTCACGAAGTG+AGG | 0.543654 | 4.3:-66919173 | MS.gene93914:CDS |
| ATTGCTCCAGATGATATGCT+TGG | 0.546633 | 4.3:-66915699 | MS.gene93914:CDS |
| CTATCTCTTTCAAGTGCTCA+AGG | 0.546786 | 4.3:+66918305 | None:intergenic |
| TATCTATTGTGTAACTCCCT+AGG | 0.546949 | 4.3:+66918893 | None:intergenic |
| TTTGAATTCATACCTTTGGA+AGG | 0.548972 | 4.3:+66919118 | None:intergenic |
| AGTTTGCTCAAAATCTTCAT+CGG | 0.549560 | 4.3:+66917644 | None:intergenic |
| ATTTGTTTGGATGGATACTG+AGG | 0.551888 | 4.3:-66915392 | MS.gene93914:CDS |
| GTAGAAAGTGAACTTGCCTC+AGG | 0.554829 | 4.3:-66915345 | MS.gene93914:CDS |
| CTCTGGGATGGAAGGCAAAG+TGG | 0.556380 | 4.3:-66916457 | MS.gene93914:CDS |
| GAGATTCTTCCAATTAATGT+TGG | 0.562618 | 4.3:-66918964 | MS.gene93914:CDS |
| ACCTTTGGAAGGTCAAGCGC+TGG | 0.564190 | 4.3:+66919129 | None:intergenic |
| AAGGAAGAATCTGCACAAAA+GGG | 0.564610 | 4.3:-66915367 | MS.gene93914:CDS |
| GTTGCTGGCTGTGTCCCTCA+AGG | 0.566523 | 4.3:-66919279 | MS.gene93914:CDS |
| ACGCCATACTCTGGGATGGA+AGG | 0.569239 | 4.3:-66916465 | MS.gene93914:CDS |
| GTAAAATCTGTGGTATCTGA+TGG | 0.573159 | 4.3:-66918667 | MS.gene93914:CDS |
| CGAGATGTGAAAGAGCTGGA+AGG | 0.575668 | 4.3:-66919252 | MS.gene93914:CDS |
| TCAGTGGCAATCTGCATCCC+CGG | 0.575983 | 4.3:+66918063 | None:intergenic |
| TTAGAAATTACCATATGCTC+CGG | 0.576298 | 4.3:+66918612 | None:intergenic |
| TATGCTTGGAAGTTCAGCTC+TGG | 0.580362 | 4.3:-66915685 | MS.gene93914:CDS |
| AAACATGCTCGAGGTCACCT+AGG | 0.587931 | 4.3:-66918910 | MS.gene93914:CDS |
| TCGCGTTGTTGAAGTTGTAG+AGG | 0.590773 | 4.3:-66919199 | MS.gene93914:CDS |
| CCAGATCACACACCTGGTCG+AGG | 0.591497 | 4.3:+66917567 | None:intergenic |
| GAGATGTGAAAGAGCTGGAA+GGG | 0.591544 | 4.3:-66919251 | MS.gene93914:CDS |
| TGAGAAGACCGACAATTCAA+GGG | 0.600489 | 4.3:-66915451 | MS.gene93914:CDS |
| CTGGCCAAGATAACATCTGT+GGG | 0.605676 | 4.3:-66915666 | MS.gene93914:CDS |
| AAGTGCTCAAGGATAAAAGG+TGG | 0.609787 | 4.3:+66918316 | None:intergenic |
| AGATAACATCTGTGGGAAGG+TGG | 0.611853 | 4.3:-66915659 | MS.gene93914:CDS |
| AACATGCTCGAGGTCACCTA+GGG | 0.613729 | 4.3:-66918909 | MS.gene93914:CDS |
| ATTCACGCCATACTCTGGGA+TGG | 0.613962 | 4.3:-66916469 | MS.gene93914:CDS |
| AGAAAGGAGCATGAGAAAGT+GGG | 0.617963 | 4.3:-66915307 | MS.gene93914:CDS |
| GCTGAAGGTTGGTCATACAA+AGG | 0.618455 | 4.3:-66915742 | MS.gene93914:intron |
| AGAGAAGACATATCCTGAGT+AGG | 0.619463 | 4.3:+66915567 | None:intergenic |
| TTGCTTTAGATCAGATCCTG+AGG | 0.623187 | 4.3:+66915329 | None:intergenic |
| AAATCCACATATTATATCAG+TGG | 0.624202 | 4.3:+66918047 | None:intergenic |
| CCAAGATAACATCTGTGGGA+AGG | 0.625892 | 4.3:-66915662 | MS.gene93914:CDS |
| TCTGGCCAAGATAACATCTG+TGG | 0.625993 | 4.3:-66915667 | MS.gene93914:CDS |
| GCACTTGAAAGAGATAGCAG+AGG | 0.626453 | 4.3:-66918299 | MS.gene93914:CDS |
| ACACAGCCAGCAACAACTAG+TGG | 0.634478 | 4.3:+66919288 | None:intergenic |
| TGGCTGAGCAGTGAAGATAC+CGG | 0.637316 | 4.3:-66918631 | MS.gene93914:CDS |
| GCCAGCGCTTGACCTTCCAA+AGG | 0.638812 | 4.3:-66919130 | MS.gene93914:intron |
| ATGAATCGAGAATATACTGT+GGG | 0.644518 | 4.3:-66918126 | MS.gene93914:CDS |
| CCTTAACTGAGCTTGTGCCG+GGG | 0.671188 | 4.3:-66918080 | MS.gene93914:CDS |
| TGCAAGACAAAACATGCTCG+AGG | 0.679994 | 4.3:-66918919 | MS.gene93914:CDS |
| GGTTGGGCGTGTAAAATCTG+TGG | 0.710077 | 4.3:-66918677 | MS.gene93914:CDS |
| AATGAATCGAGAATATACTG+TGG | 0.719912 | 4.3:-66918127 | MS.gene93914:CDS |
| AAAATGAATAGGGACACCTG+CGG | 0.776532 | 4.3:-66916562 | MS.gene93914:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATTCCATTAATATT+AGG | - | chr4.3:66918193-66918212 | MS.gene93914:intron | 10.0% |
| !! | ATATTAATGAAAAAATGAAT+AGG | - | chr4.3:66917960-66917979 | MS.gene93914:intron | 10.0% |
| !! | ATTAAATAACATAATACATA+TGG | + | chr4.3:66915486-66915505 | None:intergenic | 10.0% |
| !! | TATTAATGAAAAAATGAATA+GGG | - | chr4.3:66917961-66917980 | MS.gene93914:intron | 10.0% |
| !!! | ATAAACATTTTTCTAATTTT+TGG | - | chr4.3:66917416-66917435 | MS.gene93914:intron | 10.0% |
| !!! | TTGTTTTTTGTTTTTTTTTT+TGG | - | chr4.3:66917124-66917143 | MS.gene93914:intron | 10.0% |
| !! | TAATATAATGCATTCATTTA+TGG | - | chr4.3:66918738-66918757 | MS.gene93914:intron | 15.0% |
| !!! | AAATCATAACTTCATTTTTT+AGG | - | chr4.3:66917005-66917024 | MS.gene93914:intron | 15.0% |
| !!! | ATTTTTTTTCTTGCAATAAA+AGG | - | chr4.3:66917169-66917188 | MS.gene93914:intron | 15.0% |
| !!! | CAAAATAACAAAAATTTGTT+TGG | - | chr4.3:66919128-66919147 | MS.gene93914:intron | 15.0% |
| !!! | CTTGTCATTTATTATTATAT+TGG | + | chr4.3:66916670-66916689 | None:intergenic | 15.0% |
| !!! | TTTTATTGCAAGAAAAAAAA+TGG | + | chr4.3:66917170-66917189 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTTTTTTTGGA+AGG | - | chr4.3:66917128-66917147 | MS.gene93914:intron | 15.0% |
| !!! | TTTTTTTTCTTGCAATAAAA+GGG | - | chr4.3:66917170-66917189 | MS.gene93914:intron | 15.0% |
| !! | AAAGTTTAGAAACAAATAAC+TGG | + | chr4.3:66918348-66918367 | None:intergenic | 20.0% |
| !! | AACTGATGAAATCTTATAAT+TGG | - | chr4.3:66916692-66916711 | MS.gene93914:intron | 20.0% |
| !! | ACTGATGAAATCTTATAATT+GGG | - | chr4.3:66916693-66916712 | MS.gene93914:intron | 20.0% |
| !! | ATGTATGAACAAAATATCTA+CGG | - | chr4.3:66918527-66918546 | MS.gene93914:intron | 20.0% |
| !! | ATTGATATAGATAATCTAGA+TGG | - | chr4.3:66916806-66916825 | MS.gene93914:intron | 20.0% |
| !! | CATATGGTAATTTCTAATAT+TGG | - | chr4.3:66915927-66915946 | MS.gene93914:intron | 20.0% |
| !! | GTTGTATCATTAACAAAAAA+AGG | + | chr4.3:66917466-66917485 | None:intergenic | 20.0% |
| !! | TTAATTCTATGTGTAACAAA+TGG | - | chr4.3:66916552-66916571 | MS.gene93914:CDS | 20.0% |
| !!! | ATAACAAAAATTTGTTTGGA+TGG | - | chr4.3:66919132-66919151 | MS.gene93914:CDS | 20.0% |
| !!! | TATGATAGTATTTTTTAGTC+AGG | + | chr4.3:66917399-66917418 | None:intergenic | 20.0% |
| !!! | TTTTTGTTATTTTGATTCTG+TGG | + | chr4.3:66919122-66919141 | None:intergenic | 20.0% |
| ! | AAATCCACATATTATATCAG+TGG | + | chr4.3:66916489-66916508 | None:intergenic | 25.0% |
| ! | ATATTGTCAGTTTGAAGATA+AGG | + | chr4.3:66917944-66917963 | None:intergenic | 25.0% |
| ! | ATCACATGATTAAAATGATC+TGG | - | chr4.3:66916782-66916801 | MS.gene93914:intron | 25.0% |
| ! | CTGATGAAATCTTATAATTG+GGG | - | chr4.3:66916694-66916713 | MS.gene93914:intron | 25.0% |
| ! | GTAGATATTGAATCATGATT+TGG | - | chr4.3:66918156-66918175 | MS.gene93914:intron | 25.0% |
| ! | TATTAATTCATCACTAATGC+AGG | - | chr4.3:66915835-66915854 | MS.gene93914:intron | 25.0% |
| ! | TCCATTAATATTAGGATTTG+TGG | - | chr4.3:66918201-66918220 | MS.gene93914:intron | 25.0% |
| ! | TGTTACACATAGAATTAAGA+AGG | + | chr4.3:66916550-66916569 | None:intergenic | 25.0% |
| ! | TTAGTAACTATTCAAAAGGA+AGG | + | chr4.3:66917340-66917359 | None:intergenic | 25.0% |
| ! | TTTGTTCAAATAATTGCCAT+CGG | - | chr4.3:66917611-66917630 | MS.gene93914:CDS | 25.0% |
| !! | ACAGTATTTGAGACTTTAAT+TGG | - | chr4.3:66918403-66918422 | MS.gene93914:CDS | 25.0% |
| !! | AGAACTTGTATTCTTTTATG+AGG | + | chr4.3:66916920-66916939 | None:intergenic | 25.0% |
| !! | ATTTTCCATACAAAATGAAC+AGG | + | chr4.3:66915453-66915472 | None:intergenic | 25.0% |
| !! | TAATTCCTGTTCATTTTGTA+TGG | - | chr4.3:66915445-66915464 | MS.gene93914:CDS | 25.0% |
| !! | TATTTGAGACTTTAATTGGT+TGG | - | chr4.3:66918407-66918426 | MS.gene93914:CDS | 25.0% |
| !! | TATTTTGTTCATACATCCAA+CGG | + | chr4.3:66918523-66918542 | None:intergenic | 25.0% |
| !!! | AATGTTTTGATGTTGAGTTT+AGG | - | chr4.3:66916057-66916076 | MS.gene93914:intron | 25.0% |
| !!! | AATTTTTTCTTCAATGCTGA+AGG | - | chr4.3:66918776-66918795 | MS.gene93914:intron | 25.0% |
| !!! | AGATTTTCCTTTTGTTATGA+TGG | + | chr4.3:66915216-66915235 | None:intergenic | 25.0% |
| !!! | GAGTTTAGGTTTTATATCAA+TGG | - | chr4.3:66916071-66916090 | MS.gene93914:intron | 25.0% |
| !!! | TCATACTAACAGTTATTTCT+TGG | - | chr4.3:66916850-66916869 | MS.gene93914:intron | 25.0% |
| !!! | TTGCTTTATTAGTTTGTCTT+AGG | - | chr4.3:66919303-66919322 | MS.gene93914:CDS | 25.0% |
| !!! | TTTTTTTGGAAGGAAGATTT+AGG | - | chr4.3:66917138-66917157 | MS.gene93914:intron | 25.0% |
| AAGCTACTATGATAGTTTAG+AGG | - | chr4.3:66917048-66917067 | MS.gene93914:intron | 30.0% | |
| AATGAATCGAGAATATACTG+TGG | - | chr4.3:66916406-66916425 | MS.gene93914:intron | 30.0% | |
| ATGAATCGAGAATATACTGT+GGG | - | chr4.3:66916407-66916426 | MS.gene93914:intron | 30.0% | |
| ATGGATACCATCATAACAAA+AGG | - | chr4.3:66915206-66915225 | MS.gene93914:CDS | 30.0% | |
| ATGTATATGCACTAGTCAAA+AGG | + | chr4.3:66916016-66916035 | None:intergenic | 30.0% | |
| ATTACTGATATTGCAACTGA+TGG | - | chr4.3:66918110-66918129 | MS.gene93914:CDS | 30.0% | |
| ATTGCCACTGATATAATATG+TGG | - | chr4.3:66916482-66916501 | MS.gene93914:CDS | 30.0% | |
| CAAAGACATTTGTCAATTCA+CGG | + | chr4.3:66918040-66918059 | None:intergenic | 30.0% | |
| CAAGTTTGAATTCATACCTT+TGG | + | chr4.3:66915422-66915441 | None:intergenic | 30.0% | |
| CCACTTAGTAACTATTCAAA+AGG | + | chr4.3:66917344-66917363 | None:intergenic | 30.0% | |
| CCTAAACAACCAACATTAAT+TGG | + | chr4.3:66915581-66915600 | None:intergenic | 30.0% | |
| CTCTTGAATTTGTGAATAAG+AGG | - | chr4.3:66916589-66916608 | MS.gene93914:intron | 30.0% | |
| CTGATGGAGTTAAAGAAATA+TGG | - | chr4.3:66915882-66915901 | MS.gene93914:intron | 30.0% | |
| GAAAAACCCTTACAATACTA+TGG | - | chr4.3:66916336-66916355 | MS.gene93914:intron | 30.0% | |
| GAGATTCTTCCAATTAATGT+TGG | - | chr4.3:66915569-66915588 | MS.gene93914:CDS | 30.0% | |
| GATATAATATGTGGATTTCC+AGG | - | chr4.3:66916491-66916510 | MS.gene93914:CDS | 30.0% | |
| GCCACAAATCCTAATATTAA+TGG | + | chr4.3:66918205-66918224 | None:intergenic | 30.0% | |
| GGGTTTCAACAAAATAATCA+CGG | + | chr4.3:66918230-66918249 | None:intergenic | 30.0% | |
| GTGATGAATTAATAGATGTG+AGG | + | chr4.3:66915829-66915848 | None:intergenic | 30.0% | |
| TAACTATTCAAAAGGAAGGA+TGG | + | chr4.3:66917336-66917355 | None:intergenic | 30.0% | |
| TCTTATTCGTAAGCTATTTG+AGG | - | chr4.3:66917724-66917743 | MS.gene93914:intron | 30.0% | |
| TGCCTAATATTAAGTCATGT+CGG | + | chr4.3:66917219-66917238 | None:intergenic | 30.0% | |
| TGTATATGCACTAGTCAAAA+GGG | + | chr4.3:66916015-66916034 | None:intergenic | 30.0% | |
| TGTTGAGAAAAAAGAAAGAG+AGG | - | chr4.3:66918611-66918630 | MS.gene93914:intron | 30.0% | |
| TTAGAAATTACCATATGCTC+CGG | + | chr4.3:66915924-66915943 | None:intergenic | 30.0% | |
| TTGTTCAAATAATTGCCATC+GGG | - | chr4.3:66917612-66917631 | MS.gene93914:CDS | 30.0% | |
| TTTGAATTCATACCTTTGGA+AGG | + | chr4.3:66915418-66915437 | None:intergenic | 30.0% | |
| ! | ACTAAGGCATTCAATAAAGT+TGG | + | chr4.3:66916145-66916164 | None:intergenic | 30.0% |
| ! | AGTTTGCTCAAAATCTTCAT+CGG | + | chr4.3:66916892-66916911 | None:intergenic | 30.0% |
| ! | CCAATTAATGTTGGTTGTTT+AGG | - | chr4.3:66915578-66915597 | MS.gene93914:CDS | 30.0% |
| ! | CCTTTTGAATAGTTACTAAG+TGG | - | chr4.3:66917341-66917360 | MS.gene93914:intron | 30.0% |
| ! | CTTAGATCATGATGTTTTAC+AGG | - | chr4.3:66916097-66916116 | MS.gene93914:intron | 30.0% |
| ! | TCACTACTAAAGTACTTACA+AGG | + | chr4.3:66915667-66915686 | None:intergenic | 30.0% |
| ! | TTTTGCATAACCTAATTGCT+TGG | + | chr4.3:66916039-66916058 | None:intergenic | 30.0% |
| !! | AATTTGCTGTTCATATGCTA+AGG | - | chr4.3:66917572-66917591 | MS.gene93914:intron | 30.0% |
| !! | CAATAAAGCTTTGAACAAAC+AGG | - | chr4.3:66918941-66918960 | MS.gene93914:CDS | 30.0% |
| !! | GCTTACAATAAACTTTTTCC+TGG | + | chr4.3:66918280-66918299 | None:intergenic | 30.0% |
| !! | TTTGTTGATAAGGCTCTTTT+GGG | - | chr4.3:66919251-66919270 | MS.gene93914:CDS | 30.0% |
| !!! | CTTTCTTTTTTCTCAACAAG+AGG | + | chr4.3:66918609-66918628 | None:intergenic | 30.0% |
| !!! | TTATCATGCTTTTTTACCGT+TGG | - | chr4.3:66918504-66918523 | MS.gene93914:intron | 30.0% |
| AAAAACATTGTGCGACTATC+GGG | + | chr4.3:66918377-66918396 | None:intergenic | 35.0% | |
| AAAAGAAAGAGAGGTTGTGA+TGG | - | chr4.3:66918620-66918639 | MS.gene93914:intron | 35.0% | |
| AAAGAAAGAGAGGTTGTGAT+GGG | - | chr4.3:66918621-66918640 | MS.gene93914:intron | 35.0% | |
| AAAGGAAGAATCTGCACAAA+AGG | - | chr4.3:66919165-66919184 | MS.gene93914:CDS | 35.0% | |
| AAAGTGGGACTTTGTTGATA+AGG | - | chr4.3:66919241-66919260 | MS.gene93914:CDS | 35.0% | |
| AACCCTTACAATACTATGGA+TGG | - | chr4.3:66916340-66916359 | MS.gene93914:intron | 35.0% | |
| AAGGAAGAATCTGCACAAAA+GGG | - | chr4.3:66919166-66919185 | MS.gene93914:CDS | 35.0% | |
| AAGGCAAAGTGGAAAGAATT+TGG | - | chr4.3:66918087-66918106 | MS.gene93914:CDS | 35.0% | |
| AATAAACCACTAGTTGTTGC+TGG | - | chr4.3:66915239-66915258 | MS.gene93914:CDS | 35.0% | |
| AATGAATGCAAGATAACCTC+TGG | + | chr4.3:66917909-66917928 | None:intergenic | 35.0% | |
| AATTCATCACTAATGCAGGT+TGG | - | chr4.3:66915839-66915858 | MS.gene93914:intron | 35.0% | |
| ACAATAGCACCTAGAAAAAG+TGG | + | chr4.3:66917275-66917294 | None:intergenic | 35.0% | |
| ACTATGATAGTTTAGAGGCA+GGG | - | chr4.3:66917053-66917072 | MS.gene93914:intron | 35.0% | |
| AGATTTCACAAGTCTTGGTT+TGG | + | chr4.3:66919001-66919020 | None:intergenic | 35.0% | |
| ATAAGCATCTTACACAAAGG+GGG | + | chr4.3:66917885-66917904 | None:intergenic | 35.0% | |
| ATATTCTCGATTCATTGCCT+GGG | + | chr4.3:66916402-66916421 | None:intergenic | 35.0% | |
| ATTAAGACTATGCACTAACC+TGG | + | chr4.3:66916512-66916531 | None:intergenic | 35.0% | |
| ATTCATCACTAATGCAGGTT+GGG | - | chr4.3:66915840-66915859 | MS.gene93914:intron | 35.0% | |
| ATTTGTTTGGATGGATACTG+AGG | - | chr4.3:66919141-66919160 | MS.gene93914:CDS | 35.0% | |
| CACCATCCATAGTATTGTAA+GGG | + | chr4.3:66916345-66916364 | None:intergenic | 35.0% | |
| CACCGACATGACTTAATATT+AGG | - | chr4.3:66917214-66917233 | MS.gene93914:intron | 35.0% | |
| CATAAGCATCTTACACAAAG+GGG | + | chr4.3:66917886-66917905 | None:intergenic | 35.0% | |
| CTAATATTAAGTCATGTCGG+TGG | + | chr4.3:66917216-66917235 | None:intergenic | 35.0% | |
| GAAAAACATTGTGCGACTAT+CGG | + | chr4.3:66918378-66918397 | None:intergenic | 35.0% | |
| GAAAAAGGTTCCAAGTAATG+TGG | - | chr4.3:66918001-66918020 | MS.gene93914:intron | 35.0% | |
| GCAGGTTCATGACAATTAAA+GGG | + | chr4.3:66918250-66918269 | None:intergenic | 35.0% | |
| GCATAAGCATCTTACACAAA+GGG | + | chr4.3:66917887-66917906 | None:intergenic | 35.0% | |
| GCATATACATCCAAGCAATT+AGG | - | chr4.3:66916026-66916045 | MS.gene93914:intron | 35.0% | |
| GGGTGCTCCAAATAAATTTA+AGG | - | chr4.3:66917190-66917209 | MS.gene93914:intron | 35.0% | |
| GTAAAATCTGTGGTATCTGA+TGG | - | chr4.3:66915866-66915885 | MS.gene93914:intron | 35.0% | |
| GTCTTAGGTTTAGTGTTCTT+TGG | - | chr4.3:66919318-66919337 | MS.gene93914:CDS | 35.0% | |
| GTTGTAGAGGAGACTTTAAA+AGG | - | chr4.3:66915347-66915366 | MS.gene93914:CDS | 35.0% | |
| TACTATGATAGTTTAGAGGC+AGG | - | chr4.3:66917052-66917071 | MS.gene93914:intron | 35.0% | |
| TATATTCTCGATTCATTGCC+TGG | + | chr4.3:66916403-66916422 | None:intergenic | 35.0% | |
| TATCTATTGTGTAACTCCCT+AGG | + | chr4.3:66915643-66915662 | None:intergenic | 35.0% | |
| TCACCATCCATAGTATTGTA+AGG | + | chr4.3:66916346-66916365 | None:intergenic | 35.0% | |
| TGCAAAAAGGAGTAAACACA+TGG | + | chr4.3:66916271-66916290 | None:intergenic | 35.0% | |
| TTAATATTCACTACCTCCCA+TGG | - | chr4.3:66918575-66918594 | MS.gene93914:intron | 35.0% | |
| TTCAAGTGCTCAAGGATAAA+AGG | + | chr4.3:66916223-66916242 | None:intergenic | 35.0% | |
| TTCTTTCTCACCTGTTACAA+AGG | + | chr4.3:66915539-66915558 | None:intergenic | 35.0% | |
| TTGTAAGTGTACTCAAACAC+TGG | - | chr4.3:66917796-66917815 | MS.gene93914:intron | 35.0% | |
| ! | AAGAGATAGCAGAGGTTTTA+CGG | - | chr4.3:66916242-66916261 | MS.gene93914:intron | 35.0% |
| ! | GATCTGATCTAAAGCAAGAA+AGG | - | chr4.3:66919210-66919229 | MS.gene93914:CDS | 35.0% |
| ! | TCGGTGGCCTTAAATTTATT+TGG | + | chr4.3:66917200-66917219 | None:intergenic | 35.0% |
| ! | TTTTCTTCAATGCTGAAGGT+TGG | - | chr4.3:66918780-66918799 | MS.gene93914:intron | 35.0% |
| !! | CTTTGTTGATAAGGCTCTTT+TGG | - | chr4.3:66919250-66919269 | MS.gene93914:CDS | 35.0% |
| !! | GCCTACTCACTTGTTATAAA+GGG | - | chr4.3:66917297-66917316 | MS.gene93914:intron | 35.0% |
| !! | TAAACTTTTTCCTGGCACTT+AGG | + | chr4.3:66918272-66918291 | None:intergenic | 35.0% |
| !! | TGCCTACTCACTTGTTATAA+AGG | - | chr4.3:66917296-66917315 | MS.gene93914:intron | 35.0% |
| !! | TTCTGAGATTTCACAAGTCT+TGG | + | chr4.3:66919006-66919025 | None:intergenic | 35.0% |
| !!! | CTTTCAGTTCCACTTTTTCT+AGG | - | chr4.3:66917263-66917282 | MS.gene93914:intron | 35.0% |
| !!! | GTTATTTCTTGGCCTTTTTC+AGG | - | chr4.3:66916861-66916880 | MS.gene93914:intron | 35.0% |
| !!! | TTTTAGGATGAAACTGATGC+AGG | - | chr4.3:66917021-66917040 | MS.gene93914:intron | 35.0% |
| AAAATGAATAGGGACACCTG+CGG | - | chr4.3:66917971-66917990 | MS.gene93914:intron | 40.0% | |
| AAGTGCTCAAGGATAAAAGG+TGG | + | chr4.3:66916220-66916239 | None:intergenic | 40.0% | |
| AATCATTCACGCCATACTCT+GGG | - | chr4.3:66918060-66918079 | MS.gene93914:CDS | 40.0% | |
| ACAGTCACTCACCAAATAGA+GGG | + | chr4.3:66918673-66918692 | None:intergenic | 40.0% | |
| ACCTAAGATAGCGAGATTAG+GGG | + | chr4.3:66917513-66917532 | None:intergenic | 40.0% | |
| AGAAGTCACATGTTCAGAGT+AGG | + | chr4.3:66918715-66918734 | None:intergenic | 40.0% | |
| AGAGAAGACATATCCTGAGT+AGG | + | chr4.3:66918969-66918988 | None:intergenic | 40.0% | |
| AGCTGGTAATTCTGCTACTA+AGG | + | chr4.3:66916161-66916180 | None:intergenic | 40.0% | |
| ATTGCCTGGGATATTCAGAT+TGG | + | chr4.3:66916389-66916408 | None:intergenic | 40.0% | |
| ATTGCTCCAGATGATATGCT+TGG | - | chr4.3:66918834-66918853 | MS.gene93914:intron | 40.0% | |
| CACCTAAGATAGCGAGATTA+GGG | + | chr4.3:66917514-66917533 | None:intergenic | 40.0% | |
| CACCTGTTACAAAGGTTGAA+AGG | + | chr4.3:66915531-66915550 | None:intergenic | 40.0% | |
| CAGACCATCCAAATTCTATC+GGG | + | chr4.3:66917645-66917664 | None:intergenic | 40.0% | |
| CCAGACCATCCAAATTCTAT+CGG | + | chr4.3:66917646-66917665 | None:intergenic | 40.0% | |
| CTCAAGGATAAAAGGTGGAT+TGG | + | chr4.3:66916215-66916234 | None:intergenic | 40.0% | |
| CTTCTCTTCACCACATTACT+TGG | + | chr4.3:66918014-66918033 | None:intergenic | 40.0% | |
| GAACTTCCAAGCATATCATC+TGG | + | chr4.3:66918843-66918862 | None:intergenic | 40.0% | |
| GAGATTAGGGGAGGAAAAAA+AGG | + | chr4.3:66917501-66917520 | None:intergenic | 40.0% | |
| GCCCTTTATAACAAGTGAGT+AGG | + | chr4.3:66917301-66917320 | None:intergenic | 40.0% | |
| GGCAGGTTCATGACAATTAA+AGG | + | chr4.3:66918251-66918270 | None:intergenic | 40.0% | |
| GGCATAAGCATCTTACACAA+AGG | + | chr4.3:66917888-66917907 | None:intergenic | 40.0% | |
| TACAGTGTCCCTTGAATTGT+CGG | + | chr4.3:66919093-66919112 | None:intergenic | 40.0% | |
| TACTCTGAACATGTGACTTC+TGG | - | chr4.3:66918714-66918733 | MS.gene93914:intron | 40.0% | |
| TCACATGTGTGTGATATGTG+AGG | + | chr4.3:66915791-66915810 | None:intergenic | 40.0% | |
| TCACCTAAGATAGCGAGATT+AGG | + | chr4.3:66917515-66917534 | None:intergenic | 40.0% | |
| TGAGAAGACCGACAATTCAA+GGG | - | chr4.3:66919082-66919101 | MS.gene93914:intron | 40.0% | |
| TGCCTTTCAACCTTTGTAAC+AGG | - | chr4.3:66915526-66915545 | MS.gene93914:CDS | 40.0% | |
| TTGACCAATCTGAATATCCC+AGG | - | chr4.3:66916382-66916401 | MS.gene93914:intron | 40.0% | |
| TTGAGAAGACCGACAATTCA+AGG | - | chr4.3:66919081-66919100 | MS.gene93914:intron | 40.0% | |
| TTGGATGGATACTGAGGAAA+AGG | - | chr4.3:66919147-66919166 | MS.gene93914:CDS | 40.0% | |
| ! | AAGAAAGGAGCATGAGAAAG+TGG | - | chr4.3:66919225-66919244 | MS.gene93914:CDS | 40.0% |
| ! | AGAAAGGAGCATGAGAAAGT+GGG | - | chr4.3:66919226-66919245 | MS.gene93914:CDS | 40.0% |
| ! | CTATCTCTTTCAAGTGCTCA+AGG | + | chr4.3:66916231-66916250 | None:intergenic | 40.0% |
| ! | CTGAAGGTTGGTCATACAAA+GGG | - | chr4.3:66918792-66918811 | MS.gene93914:intron | 40.0% |
| ! | CTTTAAAAGGTCACGAAGTG+AGG | - | chr4.3:66915360-66915379 | MS.gene93914:CDS | 40.0% |
| ! | TCACAATTTTATCCTCGACC+AGG | - | chr4.3:66916954-66916973 | MS.gene93914:intron | 40.0% |
| ! | TGTTTTACAGGTCGTGACAT+TGG | - | chr4.3:66916109-66916128 | MS.gene93914:intron | 40.0% |
| !! | TCATCGGTTTCACCTGAAAA+AGG | + | chr4.3:66916876-66916895 | None:intergenic | 40.0% |
| AAGGCCCGATAGAATTTGGA+TGG | - | chr4.3:66917638-66917657 | MS.gene93914:CDS | 45.0% | |
| AAGTCGAGATGTGAAAGAGC+TGG | - | chr4.3:66915277-66915296 | MS.gene93914:CDS | 45.0% | |
| AATAATTGCCATCGGGCCAA+AGG | - | chr4.3:66917619-66917638 | MS.gene93914:CDS | 45.0% | |
| ACCAAATAGAGGGTGGTGTA+GGG | + | chr4.3:66918663-66918682 | None:intergenic | 45.0% | |
| ACCTGCGGCAAGAATGAAAA+AGG | - | chr4.3:66917986-66918005 | MS.gene93914:intron | 45.0% | |
| AGATAACATCTGTGGGAAGG+TGG | - | chr4.3:66918874-66918893 | MS.gene93914:intron | 45.0% | |
| AGCCAGAATCTTGTGCTTGT+GGG | - | chr4.3:66919027-66919046 | MS.gene93914:intron | 45.0% | |
| AGTGAAGATACCGGAGCATA+TGG | - | chr4.3:66915911-66915930 | MS.gene93914:intron | 45.0% | |
| CAACAACGCGATCAATTTGC+TGG | + | chr4.3:66915325-66915344 | None:intergenic | 45.0% | |
| CACAGTCACTCACCAAATAG+AGG | + | chr4.3:66918674-66918693 | None:intergenic | 45.0% | |
| CCAAGATAACATCTGTGGGA+AGG | - | chr4.3:66918871-66918890 | MS.gene93914:intron | 45.0% | |
| CCGATAGAATTTGGATGGTC+TGG | - | chr4.3:66917643-66917662 | MS.gene93914:CDS | 45.0% | |
| CCTCACATTTCACACACATG+CGG | - | chr4.3:66915750-66915769 | MS.gene93914:intron | 45.0% | |
| CCTTCCCACAGATGTTATCT+TGG | + | chr4.3:66918874-66918893 | None:intergenic | 45.0% | |
| CTCACATTTCACACACATGC+GGG | - | chr4.3:66915751-66915770 | MS.gene93914:intron | 45.0% | |
| CTGAACTGGCACATGCAAAA+AGG | + | chr4.3:66916284-66916303 | None:intergenic | 45.0% | |
| CTGATGGAGTTCACTTGGTA+AGG | - | chr4.3:66918126-66918145 | MS.gene93914:CDS | 45.0% | |
| CTGGCCAAGATAACATCTGT+GGG | - | chr4.3:66918867-66918886 | MS.gene93914:intron | 45.0% | |
| GAACAAACAGGTTCCTACTC+AGG | - | chr4.3:66918953-66918972 | MS.gene93914:CDS | 45.0% | |
| GAATCATTCACGCCATACTC+TGG | - | chr4.3:66918059-66918078 | MS.gene93914:CDS | 45.0% | |
| GAGATGTGAAAGAGCTGGAA+GGG | - | chr4.3:66915282-66915301 | MS.gene93914:CDS | 45.0% | |
| GCACTTGAAAGAGATAGCAG+AGG | - | chr4.3:66916234-66916253 | MS.gene93914:intron | 45.0% | |
| GTGCGCAAATTTGTGCAAGA+GGG | + | chr4.3:66915717-66915736 | None:intergenic | 45.0% | |
| GTGTAAGATGCTTATGCCAG+AGG | - | chr4.3:66917890-66917909 | MS.gene93914:intron | 45.0% | |
| GTTCTCCAATAGCATAGCCA+TGG | - | chr4.3:66918434-66918453 | MS.gene93914:intron | 45.0% | |
| TAAGATAGCGAGATTAGGGG+AGG | + | chr4.3:66917510-66917529 | None:intergenic | 45.0% | |
| TACCTTAACTGAGCTTGTGC+CGG | - | chr4.3:66916451-66916470 | MS.gene93914:CDS | 45.0% | |
| TATGCTTGGAAGTTCAGCTC+TGG | - | chr4.3:66918848-66918867 | MS.gene93914:intron | 45.0% | |
| TCACATCTCGACTTCCTTGA+GGG | + | chr4.3:66915271-66915290 | None:intergenic | 45.0% | |
| TCCAAATTCTATCGGGCCTT+TGG | + | chr4.3:66917638-66917657 | None:intergenic | 45.0% | |
| TCCCCTAATCTCGCTATCTT+AGG | - | chr4.3:66917509-66917528 | MS.gene93914:intron | 45.0% | |
| TCGCGTTGTTGAAGTTGTAG+AGG | - | chr4.3:66915334-66915353 | MS.gene93914:CDS | 45.0% | |
| TCTGGCCAAGATAACATCTG+TGG | - | chr4.3:66918866-66918885 | MS.gene93914:intron | 45.0% | |
| TGCAACTGATGGAGTTCACT+TGG | - | chr4.3:66918121-66918140 | MS.gene93914:CDS | 45.0% | |
| TGCAAGACAAAACATGCTCG+AGG | - | chr4.3:66915614-66915633 | MS.gene93914:CDS | 45.0% | |
| TGTGCGCAAATTTGTGCAAG+AGG | + | chr4.3:66915718-66915737 | None:intergenic | 45.0% | |
| TGTTCATGCACAGAACCTAG+TGG | + | chr4.3:66917089-66917108 | None:intergenic | 45.0% | |
| TTCACATCTCGACTTCCTTG+AGG | + | chr4.3:66915272-66915291 | None:intergenic | 45.0% | |
| TTCCCACAAGCACAAGATTC+TGG | + | chr4.3:66919032-66919051 | None:intergenic | 45.0% | |
| ! | AGTTTAGAGGCAGGGTATCT+TGG | - | chr4.3:66917061-66917080 | MS.gene93914:intron | 45.0% |
| ! | GCTGAAGGTTGGTCATACAA+AGG | - | chr4.3:66918791-66918810 | MS.gene93914:intron | 45.0% |
| ! | TGGGAAGGTGGTCAGTTTTT+GGG | - | chr4.3:66918886-66918905 | MS.gene93914:intron | 45.0% |
| !! | ACCTTTTTCATTCTTGCCGC+AGG | + | chr4.3:66917990-66918009 | None:intergenic | 45.0% |
| !! | AGATTTTGACGCGCAGGTTA+AGG | - | chr4.3:66918552-66918571 | MS.gene93914:intron | 45.0% |
| !! | GTTGATAAGGCTCTTTTGGG+TGG | - | chr4.3:66919254-66919273 | MS.gene93914:CDS | 45.0% |
| !!! | TATGTTATTTAATTTAATTT+GGG | - | chr4.3:66915493-66915512 | MS.gene93914:CDS | 5.0% |
| !!! | TTATGTTATTTAATTTAATT+TGG | - | chr4.3:66915492-66915511 | MS.gene93914:CDS | 5.0% |
| AAACATGCTCGAGGTCACCT+AGG | - | chr4.3:66915623-66915642 | MS.gene93914:CDS | 50.0% | |
| AACATGCTCGAGGTCACCTA+GGG | - | chr4.3:66915624-66915643 | MS.gene93914:CDS | 50.0% | |
| ACACAGCCAGCAACAACTAG+TGG | + | chr4.3:66915248-66915267 | None:intergenic | 50.0% | |
| ACCTTAACTGAGCTTGTGCC+GGG | - | chr4.3:66916452-66916471 | MS.gene93914:CDS | 50.0% | |
| AGCATAGTGCTTGCATCAGC+TGG | + | chr4.3:66916178-66916197 | None:intergenic | 50.0% | |
| ATAGCATAGCCATGGTCTGG+AGG | - | chr4.3:66918442-66918461 | MS.gene93914:intron | 50.0% | |
| CACCAAATAGAGGGTGGTGT+AGG | + | chr4.3:66918664-66918683 | None:intergenic | 50.0% | |
| CCAATAGCATAGCCATGGTC+TGG | - | chr4.3:66918439-66918458 | MS.gene93914:intron | 50.0% | |
| CCAGACCATGGCTATGCTAT+TGG | + | chr4.3:66918442-66918461 | None:intergenic | 50.0% | |
| CCGCATGTGTGTGAAATGTG+AGG | + | chr4.3:66915753-66915772 | None:intergenic | 50.0% | |
| CGAGATGTGAAAGAGCTGGA+AGG | - | chr4.3:66915281-66915300 | MS.gene93914:CDS | 50.0% | |
| CTGGAAGGGATCAGCATTGT+AGG | - | chr4.3:66915296-66915315 | MS.gene93914:CDS | 50.0% | |
| GAGCCAGAATCTTGTGCTTG+TGG | - | chr4.3:66919026-66919045 | MS.gene93914:intron | 50.0% | |
| GCAAGCACTATGCTGCGTAT+TGG | - | chr4.3:66916184-66916203 | MS.gene93914:intron | 50.0% | |
| GCATCACTTCCAGACTGAAC+TGG | + | chr4.3:66916298-66916317 | None:intergenic | 50.0% | |
| GCCAAAGGCCCGATAGAATT+TGG | - | chr4.3:66917634-66917653 | MS.gene93914:CDS | 50.0% | |
| GGTTGGGCGTGTAAAATCTG+TGG | - | chr4.3:66915856-66915875 | MS.gene93914:intron | 50.0% | |
| GTCACTCACCAAATAGAGGG+TGG | + | chr4.3:66918670-66918689 | None:intergenic | 50.0% | |
| TAGCATAGCCATGGTCTGGA+GGG | - | chr4.3:66918443-66918462 | MS.gene93914:intron | 50.0% | |
| TCCCTACACCACCCTCTATT+TGG | - | chr4.3:66918659-66918678 | MS.gene93914:CDS | 50.0% | |
| TGGCTGAGCAGTGAAGATAC+CGG | - | chr4.3:66915902-66915921 | MS.gene93914:intron | 50.0% | |
| TTGCATGTGCCAGTTCAGTC+TGG | - | chr4.3:66916286-66916305 | MS.gene93914:intron | 50.0% | |
| TTGCCTTCCATCCCAGAGTA+TGG | + | chr4.3:66918074-66918093 | None:intergenic | 50.0% | |
| ! | ATTCACGCCATACTCTGGGA+TGG | - | chr4.3:66918064-66918083 | MS.gene93914:CDS | 50.0% |
| ! | CTTTTTCCTGGCACTTAGGC+AGG | + | chr4.3:66918268-66918287 | None:intergenic | 50.0% |
| ! | GAAAGAGAGGTTGTGATGGG+AGG | - | chr4.3:66918624-66918643 | MS.gene93914:CDS | 50.0% |
| ! | GGGAAGGTGGTCAGTTTTTG+GGG | - | chr4.3:66918887-66918906 | MS.gene93914:intron | 50.0% |
| ! | GTGGGAAGGTGGTCAGTTTT+TGG | - | chr4.3:66918885-66918904 | MS.gene93914:intron | 50.0% |
| !! | AAGCGCTGGCAATGTCTTAC+GGG | + | chr4.3:66915393-66915412 | None:intergenic | 50.0% |
| !! | CAAGCGCTGGCAATGTCTTA+CGG | + | chr4.3:66915394-66915413 | None:intergenic | 50.0% |
| AACAAGAGGCCCTGAGACCA+TGG | + | chr4.3:66918595-66918614 | None:intergenic | 55.0% | |
| ACAAGAGGCCCTGAGACCAT+GGG | + | chr4.3:66918594-66918613 | None:intergenic | 55.0% | |
| CACTACCTCCCATGGTCTCA+GGG | - | chr4.3:66918583-66918602 | MS.gene93914:intron | 55.0% | |
| CATGAACCTGCCTAAGTGCC+AGG | - | chr4.3:66918259-66918278 | MS.gene93914:CDS | 55.0% | |
| CCTTAACTGAGCTTGTGCCG+GGG | - | chr4.3:66916453-66916472 | MS.gene93914:CDS | 55.0% | |
| GATGTGCCAGATCACACACC+TGG | + | chr4.3:66916975-66916994 | None:intergenic | 55.0% | |
| TCACTACCTCCCATGGTCTC+AGG | - | chr4.3:66918582-66918601 | MS.gene93914:intron | 55.0% | |
| TCAGTGGCAATCTGCATCCC+CGG | + | chr4.3:66916473-66916492 | None:intergenic | 55.0% | |
| ! | ACCTTTGGAAGGTCAAGCGC+TGG | + | chr4.3:66915407-66915426 | None:intergenic | 55.0% |
| ! | CAGGGTATCTTGGCTCCACT+AGG | - | chr4.3:66917071-66917090 | MS.gene93914:intron | 55.0% |
| !! | ACGCCATACTCTGGGATGGA+AGG | - | chr4.3:66918068-66918087 | MS.gene93914:CDS | 55.0% |
| !! | ACGGTCAGATTTTGACGCGC+AGG | - | chr4.3:66918546-66918565 | MS.gene93914:intron | 55.0% |
| !! | CTCTGGGATGGAAGGCAAAG+TGG | - | chr4.3:66918076-66918095 | MS.gene93914:CDS | 55.0% |
| !! | GAGGGTGCTGTCTAGGATGT+GGG | - | chr4.3:66918461-66918480 | MS.gene93914:intron | 55.0% |
| AGACAGCACCCTCCAGACCA+TGG | + | chr4.3:66918454-66918473 | None:intergenic | 60.0% | |
| CCAGATCACACACCTGGTCG+AGG | + | chr4.3:66916969-66916988 | None:intergenic | 60.0% | |
| CCCCGGCACAAGCTCAGTTA+AGG | + | chr4.3:66916456-66916475 | None:intergenic | 60.0% | |
| CCTCGACCAGGTGTGTGATC+TGG | - | chr4.3:66916966-66916985 | MS.gene93914:intron | 60.0% | |
| GCCAGCGCTTGACCTTCCAA+AGG | - | chr4.3:66915403-66915422 | MS.gene93914:CDS | 60.0% | |
| ! | GTTGCTGGCTGTGTCCCTCA+AGG | - | chr4.3:66915254-66915273 | MS.gene93914:CDS | 60.0% |
| !! | GGAGGGTGCTGTCTAGGATG+TGG | - | chr4.3:66918460-66918479 | MS.gene93914:intron | 60.0% |
| !! | TGGTCTGGAGGGTGCTGTCT+AGG | - | chr4.3:66918454-66918473 | MS.gene93914:intron | 60.0% |
| AGAGGCCCTGAGACCATGGG+AGG | + | chr4.3:66918591-66918610 | None:intergenic | 65.0% | |
| CTATCGGGCCTTTGGCCCGA+TGG | + | chr4.3:66917630-66917649 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 66915206 | 66919349 | 66915206 | ID=MS.gene93914 |
| chr4.3 | mRNA | 66915206 | 66919349 | 66915206 | ID=MS.gene93914.t1;Parent=MS.gene93914 |
| chr4.3 | exon | 66919131 | 66919349 | 66919131 | ID=MS.gene93914.t1.exon1;Parent=MS.gene93914.t1 |
| chr4.3 | CDS | 66919131 | 66919349 | 66919131 | ID=cds.MS.gene93914.t1;Parent=MS.gene93914.t1 |
| chr4.3 | exon | 66918888 | 66919007 | 66918888 | ID=MS.gene93914.t1.exon2;Parent=MS.gene93914.t1 |
| chr4.3 | CDS | 66918888 | 66919007 | 66918888 | ID=cds.MS.gene93914.t1;Parent=MS.gene93914.t1 |
| chr4.3 | exon | 66918623 | 66918698 | 66918623 | ID=MS.gene93914.t1.exon3;Parent=MS.gene93914.t1 |
| chr4.3 | CDS | 66918623 | 66918698 | 66918623 | ID=cds.MS.gene93914.t1;Parent=MS.gene93914.t1 |
| chr4.3 | exon | 66918228 | 66918436 | 66918228 | ID=MS.gene93914.t1.exon4;Parent=MS.gene93914.t1 |
| chr4.3 | CDS | 66918228 | 66918436 | 66918228 | ID=cds.MS.gene93914.t1;Parent=MS.gene93914.t1 |
| chr4.3 | exon | 66918043 | 66918151 | 66918043 | ID=MS.gene93914.t1.exon5;Parent=MS.gene93914.t1 |
| chr4.3 | CDS | 66918043 | 66918151 | 66918043 | ID=cds.MS.gene93914.t1;Parent=MS.gene93914.t1 |
| chr4.3 | exon | 66917580 | 66917672 | 66917580 | ID=MS.gene93914.t1.exon6;Parent=MS.gene93914.t1 |
| chr4.3 | CDS | 66917580 | 66917672 | 66917580 | ID=cds.MS.gene93914.t1;Parent=MS.gene93914.t1 |
| chr4.3 | exon | 66916413 | 66916573 | 66916413 | ID=MS.gene93914.t1.exon7;Parent=MS.gene93914.t1 |
| chr4.3 | CDS | 66916413 | 66916573 | 66916413 | ID=cds.MS.gene93914.t1;Parent=MS.gene93914.t1 |
| chr4.3 | exon | 66915206 | 66915757 | 66915206 | ID=MS.gene93914.t1.exon8;Parent=MS.gene93914.t1 |
| chr4.3 | CDS | 66915206 | 66915757 | 66915206 | ID=cds.MS.gene93914.t1;Parent=MS.gene93914.t1 |
| Gene Sequence |
| Protein sequence |
