Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98076.t1 | XP_003614127.2 | 88.6 | 668 | 36 | 4 | 1 | 632 | 1 | 664 | 3.70E-307 | 1063.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98076.t1 | Q5UNY4 | 34.4 | 372 | 207 | 10 | 256 | 607 | 135 | 489 | 1.3e-53 | 212.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98076.t1 | G7JY31 | 88.6 | 668 | 36 | 4 | 1 | 632 | 1 | 664 | 2.7e-307 | 1063.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050381 | MS.gene98076 | 0.838077 | 3.56E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene98076 | -0.809338 | 1.99E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene98076 | -0.809884 | 1.52E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene98076 | 0.825528 | 4.46E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene98076 | 0.828354 | 9.42E-55 | -1.69E-46 |
| MS.gene051138 | MS.gene98076 | 0.80466 | 1.94E-49 | -1.69E-46 |
| MS.gene05141 | MS.gene98076 | 0.805469 | 1.31E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene98076 | 0.810385 | 1.18E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene98076 | 0.801398 | 9.18E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene98076 | 0.807323 | 5.35E-50 | -1.69E-46 |
| MS.gene053488 | MS.gene98076 | 0.837679 | 4.51E-57 | -1.69E-46 |
| MS.gene053561 | MS.gene98076 | 0.833366 | 5.56E-56 | -1.69E-46 |
| MS.gene054706 | MS.gene98076 | 0.814582 | 1.43E-51 | -1.69E-46 |
| MS.gene054707 | MS.gene98076 | 0.827446 | 1.56E-54 | -1.69E-46 |
| MS.gene054708 | MS.gene98076 | 0.897618 | 1.18E-76 | -1.69E-46 |
| MS.gene055111 | MS.gene98076 | 0.805436 | 1.34E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene98076 | 0.84227 | 2.87E-58 | -1.69E-46 |
| MS.gene055154 | MS.gene98076 | 0.819172 | 1.34E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene98076 | -0.800838 | 1.19E-48 | -1.69E-46 |
| MS.gene055577 | MS.gene98076 | -0.800403 | 1.46E-48 | -1.69E-46 |
| MS.gene056224 | MS.gene98076 | 0.814132 | 1.80E-51 | -1.69E-46 |
| MS.gene057014 | MS.gene98076 | 0.800083 | 1.70E-48 | -1.69E-46 |
| MS.gene058093 | MS.gene98076 | 0.804674 | 1.93E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene98076 | 0.805024 | 1.63E-49 | -1.69E-46 |
| MS.gene058840 | MS.gene98076 | 0.829291 | 5.59E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene98076 | -0.814473 | 1.51E-51 | -1.69E-46 |
| MS.gene059223 | MS.gene98076 | 0.806671 | 7.34E-50 | -1.69E-46 |
| MS.gene059682 | MS.gene98076 | 0.8089 | 2.47E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene98076 | -0.802149 | 6.43E-49 | -1.69E-46 |
| MS.gene060205 | MS.gene98076 | 0.811351 | 7.31E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene98076 | -0.807808 | 4.22E-50 | -1.69E-46 |
| MS.gene060578 | MS.gene98076 | 0.803377 | 3.59E-49 | -1.69E-46 |
| MS.gene06074 | MS.gene98076 | 0.823356 | 1.45E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98076.t1 | MTR_5g045160 | 88.024 | 668 | 40 | 5 | 1 | 632 | 1 | 664 | 0.0 | 1130 |
| MS.gene98076.t1 | MTR_6g445440 | 78.431 | 663 | 85 | 6 | 1 | 632 | 1 | 636 | 0.0 | 1023 |
| MS.gene98076.t1 | MTR_3g103410 | 67.872 | 719 | 127 | 8 | 3 | 632 | 4 | 707 | 0.0 | 927 |
| MS.gene98076.t1 | MTR_5g045130 | 84.843 | 508 | 65 | 4 | 127 | 632 | 2 | 499 | 0.0 | 882 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98076.t1 | AT5G13210 | 55.716 | 691 | 229 | 9 | 1 | 632 | 1 | 673 | 0.0 | 751 |
| MS.gene98076.t1 | AT5G43400 | 52.814 | 693 | 228 | 9 | 1 | 632 | 1 | 655 | 0.0 | 705 |
| MS.gene98076.t1 | AT5G43390 | 51.515 | 693 | 220 | 10 | 2 | 632 | 5 | 643 | 0.0 | 672 |
| MS.gene98076.t1 | AT3G24780 | 54.146 | 615 | 192 | 7 | 55 | 597 | 107 | 703 | 0.0 | 652 |
Find 208 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCTCTCCTTAATAAATA+AGG | 0.185322 | 5.4:+35909374 | None:intergenic |
| GTTTGAGCGGTGGTGGGGTT+AGG | 0.193047 | 5.4:+35909905 | None:intergenic |
| CATCAGCCCCTTATTTATTA+AGG | 0.194807 | 5.4:-35909382 | MS.gene98076:CDS |
| ATCATGAAGAAACTTGAAAT+TGG | 0.206773 | 5.4:+35909142 | None:intergenic |
| TTCCTCTCCTTAATAAATAA+GGG | 0.272728 | 5.4:+35909375 | None:intergenic |
| GAATCTGCTGACATTGTTCT+TGG | 0.284328 | 5.4:-35908079 | MS.gene98076:CDS |
| AAATCAGTCTTGCTGCTAAA+TGG | 0.287484 | 5.4:-35909049 | MS.gene98076:CDS |
| GCTTCTATGCTGCCGCTCTA+TGG | 0.294484 | 5.4:-35909583 | MS.gene98076:CDS |
| TGAAGATGAAGATTTCCTTT+TGG | 0.296212 | 5.4:+35909403 | None:intergenic |
| CTTCTCCTTATAAAACTTCA+TGG | 0.297463 | 5.4:+35908788 | None:intergenic |
| CTTGCTGTGTGTGATGTGTC+TGG | 0.301225 | 5.4:-35908570 | MS.gene98076:CDS |
| ATATGCGATCAAACACCTTC+TGG | 0.312936 | 5.4:+35908355 | None:intergenic |
| GAGTTGCCTGAGGTGTTTAT+TGG | 0.349776 | 5.4:-35908858 | MS.gene98076:CDS |
| GGGGTTTGATTCCTTACAAT+AGG | 0.355708 | 5.4:-35908824 | MS.gene98076:CDS |
| ATCAAGCGTCTGCAAACTCT+TGG | 0.365158 | 5.4:-35908254 | MS.gene98076:CDS |
| TCAACCCCATCGGTGGGTTT+CGG | 0.365837 | 5.4:+35909801 | None:intergenic |
| TTTGAGCGGTGGTGGGGTTA+GGG | 0.367381 | 5.4:+35909906 | None:intergenic |
| AGGAGGCGCATTATGCTTAT+AGG | 0.369882 | 5.4:-35908932 | MS.gene98076:CDS |
| AGTGGTGGTTTGAGCGGTGG+TGG | 0.373276 | 5.4:+35909898 | None:intergenic |
| TGTTTATTGGTGCTAATCAA+TGG | 0.374653 | 5.4:-35908845 | MS.gene98076:CDS |
| ATCGGTGGGTTTCGGTTCCT+TGG | 0.379910 | 5.4:+35909809 | None:intergenic |
| GCAGCTTCCATGGCTTCTAC+AGG | 0.387857 | 5.4:+35908036 | None:intergenic |
| CCTAGTGATTGCTTGGTAAT+CGG | 0.388642 | 5.4:+35908227 | None:intergenic |
| GGAGAGGTTTGAGAAGTACT+TGG | 0.389397 | 5.4:-35908748 | MS.gene98076:CDS |
| AGAAGACGATAGAGGATCTC+AGG | 0.394537 | 5.4:+35909485 | None:intergenic |
| GCCATGGAAGCTGCCATCGC+TGG | 0.399741 | 5.4:-35908027 | MS.gene98076:CDS |
| GTGTGTAGCATTGGGGTTGT+TGG | 0.401844 | 5.4:-35908520 | MS.gene98076:CDS |
| GTTTGTGAGGAACATGGATT+GGG | 0.401906 | 5.4:-35908394 | MS.gene98076:CDS |
| AGCATAGAAGCCTTCTTTGT+TGG | 0.404217 | 5.4:+35909595 | None:intergenic |
| GGGTTTGATTCCTTACAATA+GGG | 0.405295 | 5.4:-35908823 | MS.gene98076:CDS |
| GAAGGTGTTTGATCGCATAT+TGG | 0.405938 | 5.4:-35908352 | MS.gene98076:CDS |
| CGATGTCTTCGTCGATCAAA+TGG | 0.407547 | 5.4:-35909852 | MS.gene98076:CDS |
| GGAGGCGCATTATGCTTATA+GGG | 0.411872 | 5.4:-35908931 | MS.gene98076:CDS |
| GTTTATTGGTGCTAATCAAT+GGG | 0.412509 | 5.4:-35908844 | MS.gene98076:CDS |
| GGAAGCTGCTCATGCTTTGA+AGG | 0.418248 | 5.4:-35909219 | MS.gene98076:CDS |
| ATCGACGAAGACATCGTTAG+TGG | 0.418636 | 5.4:+35909859 | None:intergenic |
| CTTTCTGAGTGGATGGCACC+GGG | 0.421088 | 5.4:+35908130 | None:intergenic |
| GAGTGGAGGGAAAGGAAATC+TGG | 0.423211 | 5.4:-35909428 | MS.gene98076:CDS |
| CACAACTAGTTTCTGATACT+CGG | 0.428515 | 5.4:+35908002 | None:intergenic |
| GTGGTGGTTTGAGCGGTGGT+GGG | 0.429659 | 5.4:+35909899 | None:intergenic |
| TATACTTCCTAGTGATTGCT+TGG | 0.431774 | 5.4:+35908220 | None:intergenic |
| AGTTTGTGAGGAACATGGAT+TGG | 0.432352 | 5.4:-35908395 | MS.gene98076:CDS |
| ATGGAGGTGTGTGTAGCATT+GGG | 0.432777 | 5.4:-35908528 | MS.gene98076:CDS |
| TTACAATAGGGTTGCTTCTG+TGG | 0.434673 | 5.4:-35908811 | MS.gene98076:CDS |
| CCGTTGACTCTTCCTTTGAT+CGG | 0.435307 | 5.4:-35909019 | MS.gene98076:CDS |
| TCATGAAGAAACTTGAAATT+GGG | 0.436482 | 5.4:+35909143 | None:intergenic |
| ACTAGGAAGTATAGAAAGAA+AGG | 0.441720 | 5.4:-35908210 | MS.gene98076:CDS |
| GCCAGCGATGGCAGCTTCCA+TGG | 0.443302 | 5.4:+35908026 | None:intergenic |
| GATTTGAGAGTGTAGATCTC+AGG | 0.445904 | 5.4:+35909932 | None:intergenic |
| GTTCCTCACAAACTTTGTCT+TGG | 0.445968 | 5.4:+35908404 | None:intergenic |
| GTTCCTTCCCTCGCTGACTT+TGG | 0.447504 | 5.4:-35909524 | MS.gene98076:CDS |
| GGGAAGGAACATTGGAAGCT+AGG | 0.450762 | 5.4:+35909537 | None:intergenic |
| ATCGTTAGTGGTTGTGGTGG+TGG | 0.457444 | 5.4:+35909871 | None:intergenic |
| ACAACTAGTTTCTGATACTC+GGG | 0.457651 | 5.4:+35908003 | None:intergenic |
| TGTGGTGGTGGTTTGAGTGG+TGG | 0.462615 | 5.4:+35909883 | None:intergenic |
| AGAGGTGGCAGCGAGAGTTA+AGG | 0.468057 | 5.4:-35909249 | MS.gene98076:CDS |
| CGTTGATGATTTGCTCAAGA+AGG | 0.468757 | 5.4:-35908610 | MS.gene98076:CDS |
| CCTTTCTGAGTGGATGGCAC+CGG | 0.470831 | 5.4:+35908129 | None:intergenic |
| TATGGAGGTGTGTGTAGCAT+TGG | 0.471438 | 5.4:-35908529 | MS.gene98076:CDS |
| ATAGGGTTCGTGATCGTTTG+AGG | 0.471872 | 5.4:-35908914 | MS.gene98076:CDS |
| GAAGACATCGTTAGTGGTTG+TGG | 0.479010 | 5.4:+35909865 | None:intergenic |
| GCCACTCCTTTCTGAGTGGA+TGG | 0.483109 | 5.4:+35908123 | None:intergenic |
| TTGCTGTGTGTGATGTGTCT+GGG | 0.483780 | 5.4:-35908569 | MS.gene98076:CDS |
| GCCTCAGCTTCATGTGATTG+AGG | 0.484160 | 5.4:-35908442 | MS.gene98076:CDS |
| AGGAGGATCAGATGATTAAG+AGG | 0.485373 | 5.4:-35908305 | MS.gene98076:CDS |
| AGAAAGAAGAGTGGAGGGAA+AGG | 0.487853 | 5.4:-35909436 | MS.gene98076:CDS |
| AAGTATAGAAAGAAAGGGTA+TGG | 0.487906 | 5.4:-35908204 | MS.gene98076:CDS |
| TACTTGGAGGATGTGAAGGC+AGG | 0.488941 | 5.4:-35908732 | MS.gene98076:CDS |
| GTAATAACCTTCCCTTTCCA+TGG | 0.491644 | 5.4:+35908477 | None:intergenic |
| GGTTGTGGTGGTGGTTTGAG+TGG | 0.492287 | 5.4:+35909880 | None:intergenic |
| GTATCAGAAACTAGTTGTGC+TGG | 0.495109 | 5.4:-35907998 | MS.gene98076:CDS |
| AATGCTACACACACCTCCAT+AGG | 0.501130 | 5.4:+35908531 | None:intergenic |
| GAGTATGCATGGGACCCCTA+TGG | 0.506823 | 5.4:-35908547 | MS.gene98076:CDS |
| GGAAGGTTATTACTTTCAGC+AGG | 0.508350 | 5.4:-35908467 | MS.gene98076:CDS |
| ACAGAAGCAACCCTATTGTA+AGG | 0.510787 | 5.4:+35908813 | None:intergenic |
| GGAATATGAAGGTGTGGAGG+AGG | 0.511393 | 5.4:-35908949 | MS.gene98076:CDS |
| CCTCAGCTTCATGTGATTGA+GGG | 0.511737 | 5.4:-35908441 | MS.gene98076:CDS |
| CTGATACTCGGGGCCAGCGA+TGG | 0.513732 | 5.4:+35908014 | None:intergenic |
| CACTCAGAAAGGAGTGGCAC+TGG | 0.513905 | 5.4:-35908118 | MS.gene98076:CDS |
| TCAAGCGTCTGCAAACTCTT+GGG | 0.514244 | 5.4:-35908253 | MS.gene98076:CDS |
| TGCCAAGAGGATCTTCCCTC+GGG | 0.516133 | 5.4:-35908973 | MS.gene98076:CDS |
| ATTATAGAGTCTTTGCGTGA+TGG | 0.519156 | 5.4:-35908669 | MS.gene98076:CDS |
| CTCCCGAGGGAAGATCCTCT+TGG | 0.520806 | 5.4:+35908971 | None:intergenic |
| CAGCTTCCATGGCTTCTACA+GGG | 0.521562 | 5.4:+35908037 | None:intergenic |
| GAGGTTTGAGAAGTACTTGG+AGG | 0.521875 | 5.4:-35908745 | MS.gene98076:CDS |
| GGAAGGAACATTGGAAGCTA+GGG | 0.522147 | 5.4:+35909538 | None:intergenic |
| CAAGGATAGCAAAGGGTGGA+AGG | 0.524789 | 5.4:-35909300 | MS.gene98076:CDS |
| ATATTGGATGTGGCTGTCAA+TGG | 0.529469 | 5.4:-35908336 | MS.gene98076:CDS |
| TCACCAACGTTTCTCTCCAC+TGG | 0.531788 | 5.4:-35909767 | MS.gene98076:CDS |
| AGTGTTTCAGAAGGAGTGTC+GGG | 0.531841 | 5.4:+35909710 | None:intergenic |
| ATGCTACACACACCTCCATA+GGG | 0.534414 | 5.4:+35908532 | None:intergenic |
| TTGAGTGGTGGTTTGAGCGG+TGG | 0.535032 | 5.4:+35909895 | None:intergenic |
| GTTGATGATTTGCTCAAGAA+GGG | 0.536020 | 5.4:-35908609 | MS.gene98076:CDS |
| AAAGGAAATCTGGATCCAAA+AGG | 0.541013 | 5.4:-35909418 | MS.gene98076:CDS |
| GATGTGTCTGGGAGTATGCA+TGG | 0.541073 | 5.4:-35908558 | MS.gene98076:CDS |
| ACCGGCAAGTCCAACAAAGA+AGG | 0.544742 | 5.4:-35909605 | MS.gene98076:intron |
| TGGTGGTTTGAGCGGTGGTG+GGG | 0.546051 | 5.4:+35909900 | None:intergenic |
| GCCCCTTATTTATTAAGGAG+AGG | 0.548529 | 5.4:-35909377 | MS.gene98076:CDS |
| GTCAGCGAGGGAAGGAACAT+TGG | 0.548818 | 5.4:+35909529 | None:intergenic |
| AAAGGAGTGGCACTGGTAAG+TGG | 0.549583 | 5.4:-35908111 | MS.gene98076:CDS |
| GACAAAGTTTGTGAGGAACA+TGG | 0.551414 | 5.4:-35908400 | MS.gene98076:CDS |
| CCTTGGAAGAGAATTGAAGT+TGG | 0.551483 | 5.4:+35909826 | None:intergenic |
| TTGCCAAGAGGATCTTCCCT+CGG | 0.551799 | 5.4:-35908974 | MS.gene98076:CDS |
| AGCGAGAGTTAAGGCTCAGA+AGG | 0.552664 | 5.4:-35909240 | MS.gene98076:CDS |
| AACCTTCGAGAAGACGATAG+AGG | 0.553075 | 5.4:+35909477 | None:intergenic |
| TCCTCTCCTTAATAAATAAG+GGG | 0.553117 | 5.4:+35909376 | None:intergenic |
| TGAACGAGGAACCATGGAAA+GGG | 0.554458 | 5.4:-35908488 | MS.gene98076:CDS |
| CCAACTTCAATTCTCTTCCA+AGG | 0.557082 | 5.4:-35909826 | MS.gene98076:CDS |
| TATTGGATGTGGCTGTCAAT+GGG | 0.560043 | 5.4:-35908335 | MS.gene98076:CDS |
| ATGCTTTGAAGGAAGAGAAG+AGG | 0.561707 | 5.4:-35909208 | MS.gene98076:CDS |
| TGTTGTTGTAGTTCTTGTTG+TGG | 0.562180 | 5.4:+35909330 | None:intergenic |
| CCGATTACCAAGCAATCACT+AGG | 0.565104 | 5.4:-35908227 | MS.gene98076:CDS |
| GGAAGAGAAGAGGATTGCCT+TGG | 0.568272 | 5.4:-35909198 | MS.gene98076:CDS |
| CCCTCAATCACATGAAGCTG+AGG | 0.568852 | 5.4:+35908441 | None:intergenic |
| GGGAAGACTACTATTTCTGC+TGG | 0.570304 | 5.4:-35908711 | MS.gene98076:CDS |
| ATCCTCTATCGTCTTCTCGA+AGG | 0.571604 | 5.4:-35909479 | MS.gene98076:CDS |
| CCGGTGCCATCCACTCAGAA+AGG | 0.571959 | 5.4:-35908129 | MS.gene98076:CDS |
| ATGGCCTCCGTCACTCTCGT+TGG | 0.573884 | 5.4:-35909959 | MS.gene98076:CDS |
| TGTTGTAGTTCTTGTTGTGG+TGG | 0.574406 | 5.4:+35909333 | None:intergenic |
| GTTTGATCGCATATTGGATG+TGG | 0.574432 | 5.4:-35908346 | MS.gene98076:CDS |
| GGTTTGAGTGGTGGTTTGAG+CGG | 0.575667 | 5.4:+35909892 | None:intergenic |
| CTAGGAAGTATAGAAAGAAA+GGG | 0.575902 | 5.4:-35908209 | MS.gene98076:CDS |
| AGGAACCGAAACCCACCGAT+GGG | 0.578305 | 5.4:-35909806 | MS.gene98076:CDS |
| CAGTGCCACTCCTTTCTGAG+TGG | 0.580391 | 5.4:+35908119 | None:intergenic |
| GAGAGACTCGAAGGCCACCC+CGG | 0.584902 | 5.4:-35908148 | MS.gene98076:CDS |
| AGGGAAGATCCTCTTGGCAA+TGG | 0.584939 | 5.4:+35908977 | None:intergenic |
| GAAGACGATAGAGGATCTCA+GGG | 0.585178 | 5.4:+35909486 | None:intergenic |
| TTGGAATCTGAGAGACTCGA+AGG | 0.585593 | 5.4:-35908157 | MS.gene98076:CDS |
| GATCTTTGTCTTTAGTGACA+TGG | 0.587705 | 5.4:-35908283 | MS.gene98076:CDS |
| TTTCAGTCAACCCCATCGGT+GGG | 0.587798 | 5.4:+35909795 | None:intergenic |
| TTGAACGAGGAACCATGGAA+AGG | 0.588133 | 5.4:-35908489 | MS.gene98076:CDS |
| AGACTCCATCGTGACTAAAG+AGG | 0.589624 | 5.4:-35909267 | MS.gene98076:CDS |
| ATCAACAAGCTTCTTAGCCA+AGG | 0.589866 | 5.4:+35909181 | None:intergenic |
| GAGTGTTTCAGAAGGAGTGT+CGG | 0.590014 | 5.4:+35909709 | None:intergenic |
| AAACGCAGAAAGAAGAGTGG+AGG | 0.590903 | 5.4:-35909442 | MS.gene98076:CDS |
| TTCCCTCGGGAGGAATATGA+AGG | 0.591428 | 5.4:-35908960 | MS.gene98076:CDS |
| TAACCAAAGTCAGCGAGGGA+AGG | 0.592742 | 5.4:+35909521 | None:intergenic |
| AAGGAACCGAAACCCACCGA+TGG | 0.593324 | 5.4:-35909807 | MS.gene98076:CDS |
| TATAAGCCCTGTAGAAGCCA+TGG | 0.596604 | 5.4:-35908043 | MS.gene98076:CDS |
| TTGAGAGTGTAGATCTCAGG+TGG | 0.598107 | 5.4:+35909935 | None:intergenic |
| TCAAAGGAAGAGTCAACGGA+AGG | 0.598171 | 5.4:+35909023 | None:intergenic |
| CTCAGCTTCATGTGATTGAG+GGG | 0.599232 | 5.4:-35908440 | MS.gene98076:CDS |
| ACATTGTTCTTGGATAATGA+AGG | 0.599605 | 5.4:-35908069 | MS.gene98076:CDS |
| TTTATTGGTGCTAATCAATG+GGG | 0.599749 | 5.4:-35908843 | MS.gene98076:CDS |
| TTTGTGAGGAACATGGATTG+GGG | 0.600633 | 5.4:-35908393 | MS.gene98076:CDS |
| CTGAATTGAACGAGGAACCA+TGG | 0.603342 | 5.4:-35908494 | MS.gene98076:CDS |
| GAAGTACTTGGAGGATGTGA+AGG | 0.604063 | 5.4:-35908736 | MS.gene98076:CDS |
| ACTTGGAGGATGTGAAGGCA+GGG | 0.604217 | 5.4:-35908731 | MS.gene98076:CDS |
| AGGTGGGCCAACGAGAGTGA+CGG | 0.604540 | 5.4:+35909952 | None:intergenic |
| TGTGTTGGTGCCGTTGAGGA+AGG | 0.604572 | 5.4:-35908886 | MS.gene98076:CDS |
| GTGAAGTGGCTGAGTTGCAG+TGG | 0.607162 | 5.4:-35908641 | MS.gene98076:CDS |
| CCGATCAAAGGAAGAGTCAA+CGG | 0.608539 | 5.4:+35909019 | None:intergenic |
| GGTGCCGTTGAGGAAGGTGT+TGG | 0.609929 | 5.4:-35908880 | MS.gene98076:CDS |
| GAGTCTTTGCGTGATGGAGA+TGG | 0.610505 | 5.4:-35908663 | MS.gene98076:CDS |
| CACCTTCATATTCCTCCCGA+GGG | 0.610961 | 5.4:+35908958 | None:intergenic |
| AAGGATAGCAAAGGGTGGAA+GGG | 0.614229 | 5.4:-35909299 | MS.gene98076:CDS |
| ATGTGTCTGGGAGTATGCAT+GGG | 0.615466 | 5.4:-35908557 | MS.gene98076:CDS |
| CTGAGTGGATGGCACCGGGG+TGG | 0.616153 | 5.4:+35908134 | None:intergenic |
| CTACAACAACAAGGACGTCA+AGG | 0.616279 | 5.4:-35909318 | MS.gene98076:CDS |
| TAACAGCGTTGACCGATCAA+AGG | 0.617986 | 5.4:+35909007 | None:intergenic |
| CTCTCGACGAGTGTTTCAGA+AGG | 0.618816 | 5.4:+35909701 | None:intergenic |
| AAGGACGTCAAGGATAGCAA+AGG | 0.618970 | 5.4:-35909308 | MS.gene98076:CDS |
| TGCTCAAGAAGGGAAAGATG+AGG | 0.619614 | 5.4:-35908599 | MS.gene98076:CDS |
| GGCTGTCAATGGGAATCTCA+AGG | 0.621591 | 5.4:-35908325 | MS.gene98076:CDS |
| ACACCTTCATATTCCTCCCG+AGG | 0.626089 | 5.4:+35908957 | None:intergenic |
| AACGCAGAAAGAAGAGTGGA+GGG | 0.626310 | 5.4:-35909441 | MS.gene98076:CDS |
| TTAGCACCAATAAACACCTC+AGG | 0.626398 | 5.4:+35908852 | None:intergenic |
| AACTCCAACACCTTCCTCAA+CGG | 0.630137 | 5.4:+35908876 | None:intergenic |
| AGGACGTCAAGGATAGCAAA+GGG | 0.630210 | 5.4:-35909307 | MS.gene98076:CDS |
| TTGTGAGGAACATGGATTGG+GGG | 0.639683 | 5.4:-35908392 | MS.gene98076:CDS |
| GAAGTAACCAAAGTCAGCGA+GGG | 0.641029 | 5.4:+35909517 | None:intergenic |
| CAAGAGGATCTTCCCTCGGG+AGG | 0.641432 | 5.4:-35908970 | MS.gene98076:CDS |
| CAACAAGAACTACAACAACA+AGG | 0.642561 | 5.4:-35909327 | MS.gene98076:CDS |
| AGTCCAAGACAAAGTTTGTG+AGG | 0.642724 | 5.4:-35908407 | MS.gene98076:CDS |
| TGGGCCAACGAGAGTGACGG+AGG | 0.645125 | 5.4:+35909955 | None:intergenic |
| TCGGGAGGAATATGAAGGTG+TGG | 0.645333 | 5.4:-35908955 | MS.gene98076:CDS |
| GGAAGAAGAAATCGAGACAA+GGG | 0.645821 | 5.4:+35909741 | None:intergenic |
| TGGAGGTGTGTGTAGCATTG+GGG | 0.646940 | 5.4:-35908527 | MS.gene98076:CDS |
| TCGTTTGAGGAAAGATGTGT+TGG | 0.647723 | 5.4:-35908901 | MS.gene98076:CDS |
| GAAGGTGTTGGAGTTGCCTG+AGG | 0.648237 | 5.4:-35908868 | MS.gene98076:CDS |
| AAGGAGTGTCGGGAACAACA+TGG | 0.651711 | 5.4:+35909720 | None:intergenic |
| AAGATGTGTTGGTGCCGTTG+AGG | 0.652976 | 5.4:-35908890 | MS.gene98076:CDS |
| CAAAGGAAGAGTCAACGGAA+GGG | 0.653236 | 5.4:+35909024 | None:intergenic |
| CTCCATCGTGACTAAAGAGG+TGG | 0.653770 | 5.4:-35909264 | MS.gene98076:CDS |
| CGAGGAACCATGGAAAGGGA+AGG | 0.654288 | 5.4:-35908484 | MS.gene98076:CDS |
| TATGCATGGGACCCCTATGG+AGG | 0.657200 | 5.4:-35908544 | MS.gene98076:CDS |
| GACATCGTTAGTGGTTGTGG+TGG | 0.658761 | 5.4:+35909868 | None:intergenic |
| TGGAAGAAGAAATCGAGACA+AGG | 0.663800 | 5.4:+35909740 | None:intergenic |
| TGCCACCTCTTTAGTCACGA+TGG | 0.667412 | 5.4:+35909262 | None:intergenic |
| GCGTGATGGAGATGGTGAAG+TGG | 0.668727 | 5.4:-35908655 | MS.gene98076:CDS |
| GATGAACACTGATTTCCAGA+AGG | 0.669878 | 5.4:-35908370 | MS.gene98076:CDS |
| AAAGACTCTATAATCTCGTG+AGG | 0.670125 | 5.4:+35908678 | None:intergenic |
| ATCGAGACAAGGGTTACCAG+TGG | 0.673142 | 5.4:+35909751 | None:intergenic |
| TCAGCTTCATGTGATTGAGG+GGG | 0.673206 | 5.4:-35908439 | MS.gene98076:CDS |
| GCAAAACGCAGAAAGAAGAG+TGG | 0.675176 | 5.4:-35909445 | MS.gene98076:CDS |
| GCCATCCACTCAGAAAGGAG+TGG | 0.675952 | 5.4:-35908124 | MS.gene98076:CDS |
| GGAGGAATATGAAGGTGTGG+AGG | 0.684289 | 5.4:-35908952 | MS.gene98076:CDS |
| TGAAGTAACCAAAGTCAGCG+AGG | 0.688387 | 5.4:+35909516 | None:intergenic |
| TGCTACACACACCTCCATAG+GGG | 0.689495 | 5.4:+35908533 | None:intergenic |
| TTACCAGTGGAGAGAAACGT+TGG | 0.690822 | 5.4:+35909764 | None:intergenic |
| TGAGAGTGTAGATCTCAGGT+GGG | 0.694001 | 5.4:+35909936 | None:intergenic |
| ACGTCAAGGATAGCAAAGGG+TGG | 0.698236 | 5.4:-35909304 | MS.gene98076:CDS |
| TTTCTGAGTGGATGGCACCG+GGG | 0.698885 | 5.4:+35908131 | None:intergenic |
| CAACTAGTTTCTGATACTCG+GGG | 0.701259 | 5.4:+35908004 | None:intergenic |
| TATGTGAGACCATTGCCAAG+AGG | 0.711412 | 5.4:-35908986 | MS.gene98076:CDS |
| GGAACCGAAACCCACCGATG+GGG | 0.722058 | 5.4:-35909805 | MS.gene98076:CDS |
| GTTGGTGTCTGAATTGAACG+AGG | 0.758083 | 5.4:-35908502 | MS.gene98076:CDS |
| TGTCAATGGGAATCTCAAGG+AGG | 0.758838 | 5.4:-35908322 | MS.gene98076:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATCATGAAGAAACTTGAAAT+TGG | + | chr5.4:35908813-35908832 | None:intergenic | 25.0% |
| ! | ATTCCTCTCCTTAATAAATA+AGG | + | chr5.4:35908581-35908600 | None:intergenic | 25.0% |
| ! | TCATGAAGAAACTTGAAATT+GGG | + | chr5.4:35908812-35908831 | None:intergenic | 25.0% |
| ! | TTCCTCTCCTTAATAAATAA+GGG | + | chr5.4:35908580-35908599 | None:intergenic | 25.0% |
| AAGTATAGAAAGAAAGGGTA+TGG | - | chr5.4:35909748-35909767 | MS.gene98076:CDS | 30.0% | |
| ACATTGTTCTTGGATAATGA+AGG | - | chr5.4:35909883-35909902 | MS.gene98076:CDS | 30.0% | |
| AGATTCCAAAAAACTATCTG+AGG | + | chr5.4:35909784-35909803 | None:intergenic | 30.0% | |
| CTTCTCCTTATAAAACTTCA+TGG | + | chr5.4:35909167-35909186 | None:intergenic | 30.0% | |
| TCCTCTCCTTAATAAATAAG+GGG | + | chr5.4:35908579-35908598 | None:intergenic | 30.0% | |
| ! | ACTAGGAAGTATAGAAAGAA+AGG | - | chr5.4:35909742-35909761 | MS.gene98076:CDS | 30.0% |
| ! | ATTTTCATGAAACCATAGAG+CGG | + | chr5.4:35908384-35908403 | None:intergenic | 30.0% |
| ! | CTAGGAAGTATAGAAAGAAA+GGG | - | chr5.4:35909743-35909762 | MS.gene98076:CDS | 30.0% |
| ! | TGAAGATGAAGATTTCCTTT+TGG | + | chr5.4:35908552-35908571 | None:intergenic | 30.0% |
| !! | GTTTATTGGTGCTAATCAAT+GGG | - | chr5.4:35909108-35909127 | MS.gene98076:CDS | 30.0% |
| !! | TGTTTATTGGTGCTAATCAA+TGG | - | chr5.4:35909107-35909126 | MS.gene98076:CDS | 30.0% |
| !! | TTTATTGGTGCTAATCAATG+GGG | - | chr5.4:35909109-35909128 | MS.gene98076:CDS | 30.0% |
| !! | TTTTGCTGATTGTTTGAAGA+AGG | - | chr5.4:35908847-35908866 | MS.gene98076:CDS | 30.0% |
| !!! | ATCTCGAGTTTTTGAAATCT+GGG | - | chr5.4:35908870-35908889 | MS.gene98076:CDS | 30.0% |
| !!! | GAAGTTTTTGAAGCATGATA+AGG | - | chr5.4:35909183-35909202 | MS.gene98076:CDS | 30.0% |
| AAAGACTCTATAATCTCGTG+AGG | + | chr5.4:35909277-35909296 | None:intergenic | 35.0% | |
| AAAGGAAATCTGGATCCAAA+AGG | - | chr5.4:35908534-35908553 | MS.gene98076:CDS | 35.0% | |
| AAATCAGTCTTGCTGCTAAA+TGG | - | chr5.4:35908903-35908922 | MS.gene98076:CDS | 35.0% | |
| ATTATAGAGTCTTTGCGTGA+TGG | - | chr5.4:35909283-35909302 | MS.gene98076:CDS | 35.0% | |
| CAACAAGAACTACAACAACA+AGG | - | chr5.4:35908625-35908644 | MS.gene98076:CDS | 35.0% | |
| GATCTTTGTCTTTAGTGACA+TGG | - | chr5.4:35909669-35909688 | MS.gene98076:intron | 35.0% | |
| GGGTTTGATTCCTTACAATA+GGG | - | chr5.4:35909129-35909148 | MS.gene98076:CDS | 35.0% | |
| TATACTTCCTAGTGATTGCT+TGG | + | chr5.4:35909735-35909754 | None:intergenic | 35.0% | |
| TGTTGTTGTAGTTCTTGTTG+TGG | + | chr5.4:35908625-35908644 | None:intergenic | 35.0% | |
| ! | ACAACTAGTTTCTGATACTC+GGG | + | chr5.4:35909952-35909971 | None:intergenic | 35.0% |
| ! | CACAACTAGTTTCTGATACT+CGG | + | chr5.4:35909953-35909972 | None:intergenic | 35.0% |
| ! | CATCAGCCCCTTATTTATTA+AGG | - | chr5.4:35908570-35908589 | MS.gene98076:CDS | 35.0% |
| !! | GTTGATGATTTGCTCAAGAA+GGG | - | chr5.4:35909343-35909362 | MS.gene98076:CDS | 35.0% |
| !! | TGTGGCCATGAAGTTTTATA+AGG | - | chr5.4:35909159-35909178 | MS.gene98076:CDS | 35.0% |
| !!! | GATCTCGAGTTTTTGAAATC+TGG | - | chr5.4:35908869-35908888 | MS.gene98076:CDS | 35.0% |
| !!! | TTTTGAAGCATGATAAGGAG+AGG | - | chr5.4:35909188-35909207 | MS.gene98076:CDS | 35.0% |
| ACAGAAGCAACCCTATTGTA+AGG | + | chr5.4:35909142-35909161 | None:intergenic | 40.0% | |
| AGCATAGAAGCCTTCTTTGT+TGG | + | chr5.4:35908360-35908379 | None:intergenic | 40.0% | |
| AGGAGGATCAGATGATTAAG+AGG | - | chr5.4:35909647-35909666 | MS.gene98076:intron | 40.0% | |
| AGTCCAAGACAAAGTTTGTG+AGG | - | chr5.4:35909545-35909564 | MS.gene98076:CDS | 40.0% | |
| AGTTTGTGAGGAACATGGAT+TGG | - | chr5.4:35909557-35909576 | MS.gene98076:CDS | 40.0% | |
| ATATGCGATCAAACACCTTC+TGG | + | chr5.4:35909600-35909619 | None:intergenic | 40.0% | |
| ATATTGGATGTGGCTGTCAA+TGG | - | chr5.4:35909616-35909635 | MS.gene98076:intron | 40.0% | |
| ATCAACAAGCTTCTTAGCCA+AGG | + | chr5.4:35908774-35908793 | None:intergenic | 40.0% | |
| CCAACTTCAATTCTCTTCCA+AGG | - | chr5.4:35908126-35908145 | MS.gene98076:CDS | 40.0% | |
| CCTTGGAAGAGAATTGAAGT+TGG | + | chr5.4:35908129-35908148 | None:intergenic | 40.0% | |
| GAATCTGCTGACATTGTTCT+TGG | - | chr5.4:35909873-35909892 | MS.gene98076:CDS | 40.0% | |
| GACAAAGTTTGTGAGGAACA+TGG | - | chr5.4:35909552-35909571 | MS.gene98076:CDS | 40.0% | |
| GGAAGAAGAAATCGAGACAA+GGG | + | chr5.4:35908214-35908233 | None:intergenic | 40.0% | |
| GGAAGGTTATTACTTTCAGC+AGG | - | chr5.4:35909485-35909504 | MS.gene98076:CDS | 40.0% | |
| GGGGTTTGATTCCTTACAAT+AGG | - | chr5.4:35909128-35909147 | MS.gene98076:CDS | 40.0% | |
| GTAATAACCTTCCCTTTCCA+TGG | + | chr5.4:35909478-35909497 | None:intergenic | 40.0% | |
| GTATCAGAAACTAGTTGTGC+TGG | - | chr5.4:35909954-35909973 | MS.gene98076:CDS | 40.0% | |
| GTTCCTCACAAACTTTGTCT+TGG | + | chr5.4:35909551-35909570 | None:intergenic | 40.0% | |
| GTTTGATCGCATATTGGATG+TGG | - | chr5.4:35909606-35909625 | MS.gene98076:intron | 40.0% | |
| GTTTGTGAGGAACATGGATT+GGG | - | chr5.4:35909558-35909577 | MS.gene98076:CDS | 40.0% | |
| TATTGGATGTGGCTGTCAAT+GGG | - | chr5.4:35909617-35909636 | MS.gene98076:intron | 40.0% | |
| TCGTTTGAGGAAAGATGTGT+TGG | - | chr5.4:35909051-35909070 | MS.gene98076:CDS | 40.0% | |
| TGGAAGAAGAAATCGAGACA+AGG | + | chr5.4:35908215-35908234 | None:intergenic | 40.0% | |
| TTACAATAGGGTTGCTTCTG+TGG | - | chr5.4:35909141-35909160 | MS.gene98076:CDS | 40.0% | |
| TTAGCACCAATAAACACCTC+AGG | + | chr5.4:35909103-35909122 | None:intergenic | 40.0% | |
| ! | ACATTGGAAGCTAGGGTTTT+AGG | + | chr5.4:35908410-35908429 | None:intergenic | 40.0% |
| ! | ATGTTTTCAGTCAACCCCAT+CGG | + | chr5.4:35908164-35908183 | None:intergenic | 40.0% |
| ! | CAACTAGTTTCTGATACTCG+GGG | + | chr5.4:35909951-35909970 | None:intergenic | 40.0% |
| ! | CCTAGTGATTGCTTGGTAAT+CGG | + | chr5.4:35909728-35909747 | None:intergenic | 40.0% |
| ! | GATTTGAGAGTGTAGATCTC+AGG | + | chr5.4:35908023-35908042 | None:intergenic | 40.0% |
| ! | GCCCCTTATTTATTAAGGAG+AGG | - | chr5.4:35908575-35908594 | MS.gene98076:CDS | 40.0% |
| ! | TGTTGTAGTTCTTGTTGTGG+TGG | + | chr5.4:35908622-35908641 | None:intergenic | 40.0% |
| ! | TTTGTGAGGAACATGGATTG+GGG | - | chr5.4:35909559-35909578 | MS.gene98076:CDS | 40.0% |
| !! | AGCAGCAAGACTGATTTTTG+TGG | + | chr5.4:35908900-35908919 | None:intergenic | 40.0% |
| !! | ATGCTTTGAAGGAAGAGAAG+AGG | - | chr5.4:35908744-35908763 | MS.gene98076:CDS | 40.0% |
| !! | CGTTGATGATTTGCTCAAGA+AGG | - | chr5.4:35909342-35909361 | MS.gene98076:CDS | 40.0% |
| !! | GAAGGTGTTTGATCGCATAT+TGG | - | chr5.4:35909600-35909619 | MS.gene98076:intron | 40.0% |
| !! | GATGAACACTGATTTCCAGA+AGG | - | chr5.4:35909582-35909601 | MS.gene98076:CDS | 40.0% |
| !! | GCAGCAAGACTGATTTTTGT+GGG | + | chr5.4:35908899-35908918 | None:intergenic | 40.0% |
| !!! | CTGTGCCTCAGATAGTTTTT+TGG | - | chr5.4:35909776-35909795 | MS.gene98076:CDS | 40.0% |
| AAACGCAGAAAGAAGAGTGG+AGG | - | chr5.4:35908510-35908529 | MS.gene98076:CDS | 45.0% | |
| AACCTTCGAGAAGACGATAG+AGG | + | chr5.4:35908478-35908497 | None:intergenic | 45.0% | |
| AACGCAGAAAGAAGAGTGGA+GGG | - | chr5.4:35908511-35908530 | MS.gene98076:CDS | 45.0% | |
| AACTCCAACACCTTCCTCAA+CGG | + | chr5.4:35909079-35909098 | None:intergenic | 45.0% | |
| AAGGACGTCAAGGATAGCAA+AGG | - | chr5.4:35908644-35908663 | MS.gene98076:CDS | 45.0% | |
| AAGGATAGCAAAGGGTGGAA+GGG | - | chr5.4:35908653-35908672 | MS.gene98076:CDS | 45.0% | |
| AATGCTACACACACCTCCAT+AGG | + | chr5.4:35909424-35909443 | None:intergenic | 45.0% | |
| AGAAAGAAGAGTGGAGGGAA+AGG | - | chr5.4:35908516-35908535 | MS.gene98076:CDS | 45.0% | |
| AGAAGACGATAGAGGATCTC+AGG | + | chr5.4:35908470-35908489 | None:intergenic | 45.0% | |
| AGACTCCATCGTGACTAAAG+AGG | - | chr5.4:35908685-35908704 | MS.gene98076:CDS | 45.0% | |
| AGGACGTCAAGGATAGCAAA+GGG | - | chr5.4:35908645-35908664 | MS.gene98076:CDS | 45.0% | |
| ATAGGGTTCGTGATCGTTTG+AGG | - | chr5.4:35909038-35909057 | MS.gene98076:CDS | 45.0% | |
| ATCAAGCGTCTGCAAACTCT+TGG | - | chr5.4:35909698-35909717 | MS.gene98076:intron | 45.0% | |
| ATCCTCTATCGTCTTCTCGA+AGG | - | chr5.4:35908473-35908492 | MS.gene98076:CDS | 45.0% | |
| ATCGACGAAGACATCGTTAG+TGG | + | chr5.4:35908096-35908115 | None:intergenic | 45.0% | |
| ATGCTACACACACCTCCATA+GGG | + | chr5.4:35909423-35909442 | None:intergenic | 45.0% | |
| CAAAGGAAGAGTCAACGGAA+GGG | + | chr5.4:35908931-35908950 | None:intergenic | 45.0% | |
| CCGATCAAAGGAAGAGTCAA+CGG | + | chr5.4:35908936-35908955 | None:intergenic | 45.0% | |
| CCGATTACCAAGCAATCACT+AGG | - | chr5.4:35909725-35909744 | MS.gene98076:CDS | 45.0% | |
| CCTCAGCTTCATGTGATTGA+GGG | - | chr5.4:35909511-35909530 | MS.gene98076:CDS | 45.0% | |
| CGATGTCTTCGTCGATCAAA+TGG | - | chr5.4:35908100-35908119 | MS.gene98076:CDS | 45.0% | |
| CTACAACAACAAGGACGTCA+AGG | - | chr5.4:35908634-35908653 | MS.gene98076:CDS | 45.0% | |
| CTCAGCTTCATGTGATTGAG+GGG | - | chr5.4:35909512-35909531 | MS.gene98076:CDS | 45.0% | |
| CTGAATTGAACGAGGAACCA+TGG | - | chr5.4:35909458-35909477 | MS.gene98076:CDS | 45.0% | |
| GAAGACATCGTTAGTGGTTG+TGG | + | chr5.4:35908090-35908109 | None:intergenic | 45.0% | |
| GAAGACGATAGAGGATCTCA+GGG | + | chr5.4:35908469-35908488 | None:intergenic | 45.0% | |
| GAAGTAACCAAAGTCAGCGA+GGG | + | chr5.4:35908438-35908457 | None:intergenic | 45.0% | |
| GAGGTTACAGACGAGTTTGA+GGG | + | chr5.4:35908312-35908331 | None:intergenic | 45.0% | |
| GCAAAACGCAGAAAGAAGAG+TGG | - | chr5.4:35908507-35908526 | MS.gene98076:CDS | 45.0% | |
| GGAAGGAACATTGGAAGCTA+GGG | + | chr5.4:35908417-35908436 | None:intergenic | 45.0% | |
| TATAAGCCCTGTAGAAGCCA+TGG | - | chr5.4:35909909-35909928 | MS.gene98076:CDS | 45.0% | |
| TATGTGAGACCATTGCCAAG+AGG | - | chr5.4:35908966-35908985 | MS.gene98076:CDS | 45.0% | |
| TCAAAGGAAGAGTCAACGGA+AGG | + | chr5.4:35908932-35908951 | None:intergenic | 45.0% | |
| TCAAGCGTCTGCAAACTCTT+GGG | - | chr5.4:35909699-35909718 | MS.gene98076:intron | 45.0% | |
| TCAGCTTCATGTGATTGAGG+GGG | - | chr5.4:35909513-35909532 | MS.gene98076:CDS | 45.0% | |
| TGAACGAGGAACCATGGAAA+GGG | - | chr5.4:35909464-35909483 | MS.gene98076:CDS | 45.0% | |
| TGAAGTAACCAAAGTCAGCG+AGG | + | chr5.4:35908439-35908458 | None:intergenic | 45.0% | |
| TGCTCAAGAAGGGAAAGATG+AGG | - | chr5.4:35909353-35909372 | MS.gene98076:CDS | 45.0% | |
| TGTCAATGGGAATCTCAAGG+AGG | - | chr5.4:35909630-35909649 | MS.gene98076:intron | 45.0% | |
| TTACCAGTGGAGAGAAACGT+TGG | + | chr5.4:35908191-35908210 | None:intergenic | 45.0% | |
| TTGAACGAGGAACCATGGAA+AGG | - | chr5.4:35909463-35909482 | MS.gene98076:CDS | 45.0% | |
| TTGCTGTGTGTGATGTGTCT+GGG | - | chr5.4:35909383-35909402 | MS.gene98076:CDS | 45.0% | |
| TTGGAATCTGAGAGACTCGA+AGG | - | chr5.4:35909795-35909814 | MS.gene98076:CDS | 45.0% | |
| ! | AGGAGGCGCATTATGCTTAT+AGG | - | chr5.4:35909020-35909039 | MS.gene98076:CDS | 45.0% |
| ! | ATGGAGGTGTGTGTAGCATT+GGG | - | chr5.4:35909424-35909443 | MS.gene98076:CDS | 45.0% |
| ! | ATGTGTCTGGGAGTATGCAT+GGG | - | chr5.4:35909395-35909414 | MS.gene98076:CDS | 45.0% |
| ! | GAAGTACTTGGAGGATGTGA+AGG | - | chr5.4:35909216-35909235 | MS.gene98076:CDS | 45.0% |
| ! | GAGTGTTTCAGAAGGAGTGT+CGG | + | chr5.4:35908246-35908265 | None:intergenic | 45.0% |
| ! | GAGTTGCCTGAGGTGTTTAT+TGG | - | chr5.4:35909094-35909113 | MS.gene98076:CDS | 45.0% |
| ! | GGAGGCGCATTATGCTTATA+GGG | - | chr5.4:35909021-35909040 | MS.gene98076:CDS | 45.0% |
| ! | GTTGGTGTCTGAATTGAACG+AGG | - | chr5.4:35909450-35909469 | MS.gene98076:CDS | 45.0% |
| ! | TATGGAGGTGTGTGTAGCAT+TGG | - | chr5.4:35909423-35909442 | MS.gene98076:CDS | 45.0% |
| ! | TGAGAGTGTAGATCTCAGGT+GGG | + | chr5.4:35908019-35908038 | None:intergenic | 45.0% |
| ! | TTGAGAGTGTAGATCTCAGG+TGG | + | chr5.4:35908020-35908039 | None:intergenic | 45.0% |
| !! | AGTGTTTCAGAAGGAGTGTC+GGG | + | chr5.4:35908245-35908264 | None:intergenic | 45.0% |
| !! | CCGTTGACTCTTCCTTTGAT+CGG | - | chr5.4:35908933-35908952 | MS.gene98076:CDS | 45.0% |
| !! | GAGGTTTGAGAAGTACTTGG+AGG | - | chr5.4:35909207-35909226 | MS.gene98076:CDS | 45.0% |
| !! | GGAGAGGTTTGAGAAGTACT+TGG | - | chr5.4:35909204-35909223 | MS.gene98076:CDS | 45.0% |
| !! | GGGAAGACTACTATTTCTGC+TGG | - | chr5.4:35909241-35909260 | MS.gene98076:CDS | 45.0% |
| !! | TAACAGCGTTGACCGATCAA+AGG | + | chr5.4:35908948-35908967 | None:intergenic | 45.0% |
| !! | TTGTGAGGAACATGGATTGG+GGG | - | chr5.4:35909560-35909579 | MS.gene98076:CDS | 45.0% |
| AAACTCGTCTGTAACCTCCG+TGG | - | chr5.4:35908314-35908333 | MS.gene98076:CDS | 50.0% | |
| ACACCTTCATATTCCTCCCG+AGG | + | chr5.4:35908998-35909017 | None:intergenic | 50.0% | |
| ACCGGCAAGTCCAACAAAGA+AGG | - | chr5.4:35908347-35908366 | MS.gene98076:CDS | 50.0% | |
| ACGTCAAGGATAGCAAAGGG+TGG | - | chr5.4:35908648-35908667 | MS.gene98076:CDS | 50.0% | |
| ACTTGGAGGATGTGAAGGCA+GGG | - | chr5.4:35909221-35909240 | MS.gene98076:CDS | 50.0% | |
| AGCGAGAGTTAAGGCTCAGA+AGG | - | chr5.4:35908712-35908731 | MS.gene98076:CDS | 50.0% | |
| AGGGAAGATCCTCTTGGCAA+TGG | + | chr5.4:35908978-35908997 | None:intergenic | 50.0% | |
| ATCGAGACAAGGGTTACCAG+TGG | + | chr5.4:35908204-35908223 | None:intergenic | 50.0% | |
| ATCGTTAGTGGTTGTGGTGG+TGG | + | chr5.4:35908084-35908103 | None:intergenic | 50.0% | |
| CAAGGATAGCAAAGGGTGGA+AGG | - | chr5.4:35908652-35908671 | MS.gene98076:CDS | 50.0% | |
| CACCTTCATATTCCTCCCGA+GGG | + | chr5.4:35908997-35909016 | None:intergenic | 50.0% | |
| CAGCTTCCATGGCTTCTACA+GGG | + | chr5.4:35909918-35909937 | None:intergenic | 50.0% | |
| CCCTCAATCACATGAAGCTG+AGG | + | chr5.4:35909514-35909533 | None:intergenic | 50.0% | |
| CTCCATCGTGACTAAAGAGG+TGG | - | chr5.4:35908688-35908707 | MS.gene98076:CDS | 50.0% | |
| CTCTCGACGAGTGTTTCAGA+AGG | + | chr5.4:35908254-35908273 | None:intergenic | 50.0% | |
| GACATCGTTAGTGGTTGTGG+TGG | + | chr5.4:35908087-35908106 | None:intergenic | 50.0% | |
| GAGTGGAGGGAAAGGAAATC+TGG | - | chr5.4:35908524-35908543 | MS.gene98076:CDS | 50.0% | |
| GCCTCAGCTTCATGTGATTG+AGG | - | chr5.4:35909510-35909529 | MS.gene98076:CDS | 50.0% | |
| GCCTTCTTTGTTGGACTTGC+CGG | + | chr5.4:35908351-35908370 | None:intergenic | 50.0% | |
| GGAAGAGAAGAGGATTGCCT+TGG | - | chr5.4:35908754-35908773 | MS.gene98076:CDS | 50.0% | |
| GGAAGCTGCTCATGCTTTGA+AGG | - | chr5.4:35908733-35908752 | MS.gene98076:CDS | 50.0% | |
| GGAGGTTACAGACGAGTTTG+AGG | + | chr5.4:35908313-35908332 | None:intergenic | 50.0% | |
| GGCTGTCAATGGGAATCTCA+AGG | - | chr5.4:35909627-35909646 | MS.gene98076:intron | 50.0% | |
| GGGAAGGAACATTGGAAGCT+AGG | + | chr5.4:35908418-35908437 | None:intergenic | 50.0% | |
| GGTTTGAGTGGTGGTTTGAG+CGG | + | chr5.4:35908063-35908082 | None:intergenic | 50.0% | |
| GTTACAGACGAGTTTGAGGG+CGG | + | chr5.4:35908309-35908328 | None:intergenic | 50.0% | |
| TAACCAAAGTCAGCGAGGGA+AGG | + | chr5.4:35908434-35908453 | None:intergenic | 50.0% | |
| TACTTGGAGGATGTGAAGGC+AGG | - | chr5.4:35909220-35909239 | MS.gene98076:CDS | 50.0% | |
| TCACCAACGTTTCTCTCCAC+TGG | - | chr5.4:35908185-35908204 | MS.gene98076:CDS | 50.0% | |
| TCGAGAGGCTCAAACTAGCT+TGG | - | chr5.4:35908267-35908286 | MS.gene98076:CDS | 50.0% | |
| TCGGGAGGAATATGAAGGTG+TGG | - | chr5.4:35908997-35909016 | MS.gene98076:CDS | 50.0% | |
| TGCCACCTCTTTAGTCACGA+TGG | + | chr5.4:35908693-35908712 | None:intergenic | 50.0% | |
| TGCTACACACACCTCCATAG+GGG | + | chr5.4:35909422-35909441 | None:intergenic | 50.0% | |
| TTCCCTCGGGAGGAATATGA+AGG | - | chr5.4:35908992-35909011 | MS.gene98076:CDS | 50.0% | |
| TTGCCAAGAGGATCTTCCCT+CGG | - | chr5.4:35908978-35908997 | MS.gene98076:CDS | 50.0% | |
| TTTCAGTCAACCCCATCGGT+GGG | + | chr5.4:35908160-35908179 | None:intergenic | 50.0% | |
| ! | CTTGCTGTGTGTGATGTGTC+TGG | - | chr5.4:35909382-35909401 | MS.gene98076:CDS | 50.0% |
| ! | GAGTCTTTGCGTGATGGAGA+TGG | - | chr5.4:35909289-35909308 | MS.gene98076:CDS | 50.0% |
| ! | GATGTGTCTGGGAGTATGCA+TGG | - | chr5.4:35909394-35909413 | MS.gene98076:CDS | 50.0% |
| ! | GGAATATGAAGGTGTGGAGG+AGG | - | chr5.4:35909003-35909022 | MS.gene98076:CDS | 50.0% |
| ! | GGAGGAATATGAAGGTGTGG+AGG | - | chr5.4:35909000-35909019 | MS.gene98076:CDS | 50.0% |
| ! | GTGTGTAGCATTGGGGTTGT+TGG | - | chr5.4:35909432-35909451 | MS.gene98076:CDS | 50.0% |
| ! | TGGAGGTGTGTGTAGCATTG+GGG | - | chr5.4:35909425-35909444 | MS.gene98076:CDS | 50.0% |
| ! | TTTTCAGTCAACCCCATCGG+TGG | + | chr5.4:35908161-35908180 | None:intergenic | 50.0% |
| !! | AAAGGAGTGGCACTGGTAAG+TGG | - | chr5.4:35909841-35909860 | MS.gene98076:CDS | 50.0% |
| !! | AAGATGTGTTGGTGCCGTTG+AGG | - | chr5.4:35909062-35909081 | MS.gene98076:CDS | 50.0% |
| !! | AAGGAGTGTCGGGAACAACA+TGG | + | chr5.4:35908235-35908254 | None:intergenic | 50.0% |
| !! | CTTCTGAAACACTCGTCGAG+AGG | - | chr5.4:35908252-35908271 | MS.gene98076:CDS | 50.0% |
| AAGGAACCGAAACCCACCGA+TGG | - | chr5.4:35908145-35908164 | MS.gene98076:CDS | 55.0% | |
| AGAGGTGGCAGCGAGAGTTA+AGG | - | chr5.4:35908703-35908722 | MS.gene98076:CDS | 55.0% | |
| AGGAACCGAAACCCACCGAT+GGG | - | chr5.4:35908146-35908165 | MS.gene98076:CDS | 55.0% | |
| CACTCAGAAAGGAGTGGCAC+TGG | - | chr5.4:35909834-35909853 | MS.gene98076:CDS | 55.0% | |
| CCTTTCTGAGTGGATGGCAC+CGG | + | chr5.4:35909826-35909845 | None:intergenic | 55.0% | |
| CGAGGAACCATGGAAAGGGA+AGG | - | chr5.4:35909468-35909487 | MS.gene98076:CDS | 55.0% | |
| CTTTCTGAGTGGATGGCACC+GGG | + | chr5.4:35909825-35909844 | None:intergenic | 55.0% | |
| GAGTATGCATGGGACCCCTA+TGG | - | chr5.4:35909405-35909424 | MS.gene98076:CDS | 55.0% | |
| GCAGCTTCCATGGCTTCTAC+AGG | + | chr5.4:35909919-35909938 | None:intergenic | 55.0% | |
| GCCACTCCTTTCTGAGTGGA+TGG | + | chr5.4:35909832-35909851 | None:intergenic | 55.0% | |
| GCCATCCACTCAGAAAGGAG+TGG | - | chr5.4:35909828-35909847 | MS.gene98076:CDS | 55.0% | |
| GCTTCTATGCTGCCGCTCTA+TGG | - | chr5.4:35908369-35908388 | MS.gene98076:CDS | 55.0% | |
| GTCAGCGAGGGAAGGAACAT+TGG | + | chr5.4:35908426-35908445 | None:intergenic | 55.0% | |
| GTGAAGTGGCTGAGTTGCAG+TGG | - | chr5.4:35909311-35909330 | MS.gene98076:CDS | 55.0% | |
| TATGCATGGGACCCCTATGG+AGG | - | chr5.4:35909408-35909427 | MS.gene98076:CDS | 55.0% | |
| TGCCAAGAGGATCTTCCCTC+GGG | - | chr5.4:35908979-35908998 | MS.gene98076:CDS | 55.0% | |
| TGTAACCTCCGTGGTGTTCG+TGG | - | chr5.4:35908323-35908342 | MS.gene98076:CDS | 55.0% | |
| TTGAGTGGTGGTTTGAGCGG+TGG | + | chr5.4:35908060-35908079 | None:intergenic | 55.0% | |
| TTTCTGAGTGGATGGCACCG+GGG | + | chr5.4:35909824-35909843 | None:intergenic | 55.0% | |
| ! | ATCGGTGGGTTTCGGTTCCT+TGG | + | chr5.4:35908146-35908165 | None:intergenic | 55.0% |
| ! | CAGTGCCACTCCTTTCTGAG+TGG | + | chr5.4:35909836-35909855 | None:intergenic | 55.0% |
| ! | GCGTGATGGAGATGGTGAAG+TGG | - | chr5.4:35909297-35909316 | MS.gene98076:CDS | 55.0% |
| ! | TCAACCCCATCGGTGGGTTT+CGG | + | chr5.4:35908154-35908173 | None:intergenic | 55.0% |
| !! | GAAGGTGTTGGAGTTGCCTG+AGG | - | chr5.4:35909084-35909103 | MS.gene98076:CDS | 55.0% |
| !! | GGTTGTGGTGGTGGTTTGAG+TGG | + | chr5.4:35908075-35908094 | None:intergenic | 55.0% |
| !! | GTTCCTTCCCTCGCTGACTT+TGG | - | chr5.4:35908428-35908447 | MS.gene98076:CDS | 55.0% |
| !! | TGTGGTGGTGGTTTGAGTGG+TGG | + | chr5.4:35908072-35908091 | None:intergenic | 55.0% |
| !! | TGTGTTGGTGCCGTTGAGGA+AGG | - | chr5.4:35909066-35909085 | MS.gene98076:CDS | 55.0% |
| !! | TTTGAGCGGTGGTGGGGTTA+GGG | + | chr5.4:35908049-35908068 | None:intergenic | 55.0% |
| ACGAGTTTGAGGGCGGTGAG+AGG | + | chr5.4:35908302-35908321 | None:intergenic | 60.0% | |
| AGGTGGGCCAACGAGAGTGA+CGG | + | chr5.4:35908003-35908022 | None:intergenic | 60.0% | |
| AGTGGTGGTTTGAGCGGTGG+TGG | + | chr5.4:35908057-35908076 | None:intergenic | 60.0% | |
| ATGGCCTCCGTCACTCTCGT+TGG | - | chr5.4:35907993-35908012 | MS.gene98076:CDS | 60.0% | |
| CAAGAGGATCTTCCCTCGGG+AGG | - | chr5.4:35908982-35909001 | MS.gene98076:CDS | 60.0% | |
| CGAGTTTGAGGGCGGTGAGA+GGG | + | chr5.4:35908301-35908320 | None:intergenic | 60.0% | |
| CTCCCGAGGGAAGATCCTCT+TGG | + | chr5.4:35908984-35909003 | None:intergenic | 60.0% | |
| CTCCGTGGTGTTCGTGGTAC+CGG | - | chr5.4:35908329-35908348 | MS.gene98076:CDS | 60.0% | |
| GGAACCGAAACCCACCGATG+GGG | - | chr5.4:35908147-35908166 | MS.gene98076:CDS | 60.0% | |
| GTGGTGGTTTGAGCGGTGGT+GGG | + | chr5.4:35908056-35908075 | None:intergenic | 60.0% | |
| TGCCGGTACCACGAACACCA+CGG | + | chr5.4:35908334-35908353 | None:intergenic | 60.0% | |
| TGGTGGTTTGAGCGGTGGTG+GGG | + | chr5.4:35908055-35908074 | None:intergenic | 60.0% | |
| ! | GAGGGCGGTGAGAGGGTTTT+AGG | + | chr5.4:35908294-35908313 | None:intergenic | 60.0% |
| !! | CCGGTGCCATCCACTCAGAA+AGG | - | chr5.4:35909823-35909842 | MS.gene98076:CDS | 60.0% |
| !! | GGTGCCGTTGAGGAAGGTGT+TGG | - | chr5.4:35909072-35909091 | MS.gene98076:CDS | 60.0% |
| !! | GTTTGAGCGGTGGTGGGGTT+AGG | + | chr5.4:35908050-35908069 | None:intergenic | 60.0% |
| CGGTACCACGAACACCACGG+AGG | + | chr5.4:35908331-35908350 | None:intergenic | 65.0% | |
| CTGATACTCGGGGCCAGCGA+TGG | + | chr5.4:35909941-35909960 | None:intergenic | 65.0% | |
| GAGAGACTCGAAGGCCACCC+CGG | - | chr5.4:35909804-35909823 | MS.gene98076:CDS | 65.0% | |
| GCCAGCGATGGCAGCTTCCA+TGG | + | chr5.4:35909929-35909948 | None:intergenic | 65.0% | |
| GCCATGGAAGCTGCCATCGC+TGG | - | chr5.4:35909925-35909944 | MS.gene98076:CDS | 65.0% | |
| TGGGCCAACGAGAGTGACGG+AGG | + | chr5.4:35908000-35908019 | None:intergenic | 65.0% | |
| ! | CTGAGTGGATGGCACCGGGG+TGG | + | chr5.4:35909821-35909840 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 35907993 | 35909981 | 35907993 | ID=MS.gene98076 |
| chr5.4 | mRNA | 35907993 | 35909981 | 35907993 | ID=MS.gene98076.t1;Parent=MS.gene98076 |
| chr5.4 | exon | 35909709 | 35909981 | 35909709 | ID=MS.gene98076.t1.exon1;Parent=MS.gene98076.t1 |
| chr5.4 | CDS | 35909709 | 35909981 | 35909709 | ID=cds.MS.gene98076.t1;Parent=MS.gene98076.t1 |
| chr5.4 | exon | 35907993 | 35909618 | 35907993 | ID=MS.gene98076.t1.exon2;Parent=MS.gene98076.t1 |
| chr5.4 | CDS | 35907993 | 35909618 | 35907993 | ID=cds.MS.gene98076.t1;Parent=MS.gene98076.t1 |
| Gene Sequence |
| Protein sequence |
