Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005530.01.T01 | XP_003592386.2 | 90.03 | 331 | 11 | 1 | 1 | 309 | 41 | 371 | 0 | 610 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005530.01.T01 | Q9FLI4 | 69.325 | 326 | 75 | 3 | 1 | 304 | 41 | 363 | 1.38E-154 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005530.01.T01 | G7ID47 | 90.030 | 331 | 11 | 1 | 1 | 309 | 41 | 371 | 0.0 | 610 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048996.01 | MsG0180005530.01 | 0.811987 | 5.317303e-51 | 3.339794e-48 |
| MsG0180000115.01 | MsG0180005530.01 | 0.840259 | 9.681511e-58 | 1.371457e-54 |
| MsG0180000144.01 | MsG0180005530.01 | 0.802191 | 6.306074e-49 | 3.069586e-46 |
| MsG0180000155.01 | MsG0180005530.01 | 0.831231 | 1.877075e-55 | 2.024398e-52 |
| MsG0180000275.01 | MsG0180005530.01 | 0.825678 | 4.111661e-54 | 3.773450e-51 |
| MsG0180000324.01 | MsG0180005530.01 | 0.818819 | 1.606288e-52 | 1.215047e-49 |
| MsG0180000557.01 | MsG0180005530.01 | 0.834532 | 2.837890e-56 | 3.377536e-53 |
| MsG0180003094.01 | MsG0180005530.01 | 0.809724 | 1.642464e-50 | 9.717429e-48 |
| MsG0180004754.01 | MsG0180005530.01 | 0.837140 | 6.194887e-57 | 7.973642e-54 |
| MsG0180004989.01 | MsG0180005530.01 | 0.801892 | 7.266043e-49 | 3.510283e-46 |
| MsG0180005529.01 | MsG0180005530.01 | 0.831238 | 1.869504e-55 | 2.016595e-52 |
| MsG0180005530.01 | MsG0180005575.01 | 0.802808 | 4.705388e-49 | 2.326930e-46 |
| MsG0180005530.01 | MsG0180005746.01 | 0.827151 | 1.833202e-54 | 1.754974e-51 |
| MsG0180005530.01 | MsG0180005962.01 | -0.847486 | 1.121479e-59 | 1.996513e-56 |
| MsG0180005530.01 | MsG0180006000.01 | 0.809033 | 2.310510e-50 | 1.341951e-47 |
| MsG0180005530.01 | MsG0180006070.01 | 0.803742 | 3.014991e-49 | 1.526998e-46 |
| MsG0180005530.01 | MsG0280006305.01 | 0.814989 | 1.162892e-51 | 7.919932e-49 |
| MsG0180005530.01 | MsG0280007067.01 | 0.837585 | 4.767099e-57 | 6.220582e-54 |
| MsG0180005530.01 | MsG0280007196.01 | 0.812909 | 3.344043e-51 | 2.152719e-48 |
| MsG0180005530.01 | MsG0280007226.01 | 0.816912 | 4.330154e-52 | 3.108354e-49 |
| MsG0180005530.01 | MsG0280007452.01 | 0.818023 | 2.433287e-52 | 1.800658e-49 |
| MsG0180005530.01 | MsG0280008614.01 | 0.862621 | 4.451455e-64 | 1.311927e-60 |
| MsG0180005530.01 | MsG0280008764.01 | 0.820643 | 6.156061e-53 | 4.898307e-50 |
| MsG0180005530.01 | MsG0280008909.01 | 0.818525 | 1.873269e-52 | 1.405605e-49 |
| MsG0180005530.01 | MsG0280009794.01 | 0.816458 | 5.474331e-52 | 3.880852e-49 |
| MsG0180005530.01 | MsG0280010907.01 | 0.808930 | 2.430630e-50 | 1.407800e-47 |
| MsG0180005530.01 | MsG0280010977.01 | 0.832257 | 1.047792e-55 | 1.164746e-52 |
| MsG0180005530.01 | MsG0380013641.01 | 0.812354 | 4.421400e-51 | 2.805041e-48 |
| MsG0180005530.01 | MsG0380014778.01 | 0.810441 | 1.151191e-50 | 6.939506e-48 |
| MsG0180005530.01 | MsG0380015944.01 | 0.814679 | 1.362407e-51 | 9.201272e-49 |
| MsG0180005530.01 | MsG0380016005.01 | 0.806719 | 7.174376e-50 | 3.922232e-47 |
| MsG0180005530.01 | MsG0380016247.01 | 0.854909 | 8.987445e-62 | 2.038696e-58 |
| MsG0180005530.01 | MsG0380016703.01 | 0.828129 | 1.067545e-54 | 1.051609e-51 |
| MsG0180005530.01 | MsG0380016994.01 | 0.806497 | 7.993381e-50 | 4.345092e-47 |
| MsG0180005530.01 | MsG0380017159.01 | 0.814908 | 1.212576e-51 | 8.239496e-49 |
| MsG0180005530.01 | MsG0380017836.01 | 0.820142 | 8.020367e-53 | 6.294755e-50 |
| MsG0180005530.01 | MsG0480018230.01 | 0.813050 | 3.114797e-51 | 2.012684e-48 |
| MsG0180005530.01 | MsG0480020597.01 | 0.816722 | 4.777444e-52 | 3.411588e-49 |
| MsG0180005530.01 | MsG0480020847.01 | 0.812290 | 4.567738e-51 | 2.892782e-48 |
| MsG0180005530.01 | MsG0480022228.01 | 0.804706 | 1.899302e-49 | 9.860880e-47 |
| MsG0180005530.01 | MsG0480022620.01 | 0.826524 | 2.587420e-54 | 2.432390e-51 |
| MsG0180005530.01 | MsG0480023053.01 | 0.842633 | 2.295429e-58 | 3.501318e-55 |
| MsG0180005530.01 | MsG0480023463.01 | 0.809973 | 1.451662e-50 | 8.644707e-48 |
| MsG0180005530.01 | MsG0480023620.01 | 0.819739 | 9.914755e-53 | 7.694292e-50 |
| MsG0180005530.01 | MsG0480023639.01 | 0.827505 | 1.507935e-54 | 1.458577e-51 |
| MsG0180005530.01 | MsG0580025645.01 | 0.814480 | 1.508341e-51 | 1.013266e-48 |
| MsG0180005530.01 | MsG0580026059.01 | 0.838522 | 2.736190e-57 | 3.674142e-54 |
| MsG0180005530.01 | MsG0580028060.01 | 0.852398 | 4.739203e-61 | 9.889749e-58 |
| MsG0180005530.01 | MsG0580028897.01 | 0.829568 | 4.786091e-55 | 4.916866e-52 |
| MsG0180005530.01 | MsG0580029127.01 | 0.839100 | 1.939606e-57 | 2.650831e-54 |
| MsG0180005530.01 | MsG0680030865.01 | 0.872291 | 3.559389e-67 | 1.481260e-63 |
| MsG0180005530.01 | MsG0680030968.01 | 0.803495 | 3.393156e-49 | 1.707662e-46 |
| MsG0180005530.01 | MsG0680034497.01 | 0.833692 | 4.607424e-56 | 5.346146e-53 |
| MsG0180005530.01 | MsG0680034853.01 | 0.819226 | 1.298274e-52 | 9.931473e-50 |
| MsG0180005530.01 | MsG0780036297.01 | 0.805839 | 1.099458e-49 | 5.877182e-47 |
| MsG0180005530.01 | MsG0780036752.01 | 0.823632 | 1.247853e-53 | 1.080389e-50 |
| MsG0180005530.01 | MsG0780038603.01 | 0.824236 | 9.004804e-54 | 7.930050e-51 |
| MsG0180005530.01 | MsG0780039189.01 | 0.813798 | 2.132533e-51 | 1.406298e-48 |
| MsG0180005530.01 | MsG0780040472.01 | 0.807057 | 6.085937e-50 | 3.356367e-47 |
| MsG0180005530.01 | MsG0780040926.01 | 0.805023 | 1.630343e-49 | 8.533793e-47 |
| MsG0180005530.01 | MsG0780041735.01 | 0.819540 | 1.100722e-52 | 8.494744e-50 |
| MsG0180005530.01 | MsG0880042090.01 | 0.810617 | 1.054616e-50 | 6.387462e-48 |
| MsG0180005530.01 | MsG0880042544.01 | 0.875388 | 3.205948e-68 | 1.493877e-64 |
| MsG0180005530.01 | MsG0880042760.01 | 0.808170 | 3.532333e-50 | 2.005642e-47 |
| MsG0180005530.01 | MsG0880042773.01 | 0.830654 | 2.600349e-55 | 2.757091e-52 |
| MsG0180005530.01 | MsG0880043147.01 | 0.828431 | 9.023051e-55 | 8.967170e-52 |
| MsG0180005530.01 | MsG0880044782.01 | 0.817498 | 3.196967e-52 | 2.332089e-49 |
| MsG0180005530.01 | MsG0880045294.01 | 0.825667 | 4.137022e-54 | 3.795535e-51 |
| MsG0180005530.01 | MsG0880045483.01 | 0.821995 | 3.001722e-53 | 2.480808e-50 |
| MsG0180005530.01 | MsG0880045838.01 | 0.818195 | 2.224528e-52 | 1.654017e-49 |
| MsG0180005530.01 | MsG0880046237.01 | 0.824427 | 8.121356e-54 | 7.190786e-51 |
| MsG0180005530.01 | MsG0880046238.01 | 0.815558 | 8.691720e-52 | 6.012330e-49 |
| MsG0180005530.01 | MsG0880046556.01 | 0.809590 | 1.755229e-50 | 1.034770e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005530.01.T01 | MTR_1g102350 | 90.030 | 331 | 11 | 1 | 1 | 309 | 41 | 371 | 0.0 | 610 |
| MsG0180005530.01.T01 | MTR_4g095360 | 54.154 | 325 | 119 | 3 | 1 | 306 | 35 | 348 | 8.11e-119 | 359 |
| MsG0180005530.01.T01 | MTR_5g016120 | 52.615 | 325 | 124 | 4 | 3 | 308 | 42 | 355 | 1.15e-111 | 341 |
| MsG0180005530.01.T01 | MTR_0047s0120 | 51.692 | 325 | 127 | 3 | 3 | 308 | 38 | 351 | 6.34e-109 | 333 |
| MsG0180005530.01.T01 | MTR_3g102810 | 50.765 | 327 | 131 | 3 | 1 | 308 | 29 | 344 | 1.86e-105 | 325 |
| MsG0180005530.01.T01 | MTR_2g042130 | 47.507 | 341 | 147 | 4 | 1 | 310 | 31 | 370 | 7.07e-103 | 318 |
| MsG0180005530.01.T01 | MTR_1g018510 | 47.962 | 319 | 136 | 3 | 7 | 306 | 2 | 309 | 2.20e-101 | 313 |
| MsG0180005530.01.T01 | MTR_8g022870 | 48.214 | 336 | 143 | 5 | 1 | 315 | 34 | 359 | 9.80e-98 | 305 |
| MsG0180005530.01.T01 | MTR_4g073540 | 44.379 | 338 | 145 | 5 | 1 | 309 | 37 | 360 | 8.03e-97 | 302 |
| MsG0180005530.01.T01 | MTR_7g075900 | 50.175 | 285 | 123 | 1 | 40 | 305 | 79 | 363 | 2.68e-92 | 291 |
| MsG0180005530.01.T01 | MTR_7g098630 | 45.768 | 319 | 143 | 4 | 9 | 306 | 40 | 349 | 2.00e-91 | 290 |
| MsG0180005530.01.T01 | MTR_4g125180 | 50.342 | 292 | 122 | 4 | 41 | 309 | 58 | 349 | 1.79e-89 | 283 |
| MsG0180005530.01.T01 | MTR_8g021130 | 47.289 | 332 | 139 | 8 | 3 | 306 | 44 | 367 | 3.26e-85 | 272 |
| MsG0180005530.01.T01 | MTR_8g024390 | 43.243 | 333 | 162 | 6 | 1 | 309 | 33 | 362 | 1.00e-83 | 268 |
| MsG0180005530.01.T01 | MTR_8g024370 | 41.916 | 334 | 162 | 6 | 1 | 309 | 33 | 359 | 6.18e-83 | 266 |
| MsG0180005530.01.T01 | MTR_1g078110 | 41.265 | 332 | 171 | 3 | 1 | 310 | 34 | 363 | 4.22e-82 | 263 |
| MsG0180005530.01.T01 | MTR_7g079300 | 42.308 | 338 | 163 | 7 | 1 | 310 | 34 | 367 | 1.50e-81 | 262 |
| MsG0180005530.01.T01 | MTR_8g024380 | 40.663 | 332 | 172 | 3 | 1 | 309 | 34 | 363 | 1.92e-80 | 259 |
| MsG0180005530.01.T01 | MTR_8g024420 | 42.296 | 331 | 164 | 5 | 1 | 309 | 1 | 326 | 2.47e-80 | 258 |
| MsG0180005530.01.T01 | MTR_7g118080 | 41.641 | 329 | 170 | 4 | 1 | 309 | 36 | 362 | 2.74e-80 | 259 |
| MsG0180005530.01.T01 | MTR_7g079310 | 41.317 | 334 | 169 | 5 | 1 | 310 | 34 | 364 | 7.70e-80 | 258 |
| MsG0180005530.01.T01 | MTR_4g134320 | 43.030 | 330 | 144 | 7 | 8 | 306 | 50 | 366 | 1.85e-78 | 254 |
| MsG0180005530.01.T01 | MTR_1g079120 | 41.515 | 330 | 167 | 5 | 1 | 310 | 38 | 361 | 1.96e-77 | 251 |
| MsG0180005530.01.T01 | MTR_2g018125 | 43.590 | 312 | 132 | 6 | 42 | 309 | 70 | 381 | 3.05e-77 | 251 |
| MsG0180005530.01.T01 | MTR_3g082200 | 42.761 | 297 | 139 | 4 | 38 | 305 | 72 | 366 | 3.46e-77 | 251 |
| MsG0180005530.01.T01 | MTR_8g072440 | 43.478 | 322 | 149 | 8 | 12 | 309 | 9 | 321 | 3.63e-77 | 249 |
| MsG0180005530.01.T01 | MTR_5g025010 | 46.233 | 292 | 131 | 6 | 42 | 309 | 37 | 326 | 3.99e-77 | 249 |
| MsG0180005530.01.T01 | MTR_5g025010 | 46.233 | 292 | 131 | 6 | 42 | 309 | 69 | 358 | 5.24e-77 | 250 |
| MsG0180005530.01.T01 | MTR_4g053630 | 44.551 | 312 | 146 | 7 | 28 | 315 | 29 | 337 | 1.23e-76 | 248 |
| MsG0180005530.01.T01 | MTR_2g018135 | 43.574 | 319 | 134 | 7 | 37 | 309 | 61 | 379 | 1.96e-76 | 249 |
| MsG0180005530.01.T01 | MTR_7g104200 | 44.850 | 301 | 137 | 7 | 29 | 309 | 57 | 348 | 3.21e-76 | 248 |
| MsG0180005530.01.T01 | MTR_8g072440 | 45.205 | 292 | 134 | 6 | 42 | 309 | 74 | 363 | 1.09e-75 | 246 |
| MsG0180005530.01.T01 | MTR_3g082200 | 47.967 | 246 | 119 | 4 | 64 | 305 | 3 | 243 | 9.74e-75 | 242 |
| MsG0180005530.01.T01 | MTR_7g079295 | 40.785 | 331 | 168 | 5 | 1 | 305 | 34 | 362 | 2.01e-74 | 238 |
| MsG0180005530.01.T01 | MTR_7g098070 | 44.482 | 299 | 133 | 6 | 38 | 306 | 67 | 362 | 2.91e-74 | 243 |
| MsG0180005530.01.T01 | MTR_5g096750 | 42.320 | 319 | 149 | 6 | 17 | 305 | 53 | 366 | 3.96e-74 | 243 |
| MsG0180005530.01.T01 | MTR_3g104930 | 44.108 | 297 | 131 | 6 | 37 | 305 | 60 | 349 | 9.20e-74 | 241 |
| MsG0180005530.01.T01 | MTR_7g075890 | 46.207 | 290 | 130 | 7 | 38 | 309 | 226 | 507 | 1.54e-72 | 240 |
| MsG0180005530.01.T01 | MTR_3g114420 | 42.424 | 297 | 133 | 7 | 37 | 305 | 66 | 352 | 3.33e-72 | 237 |
| MsG0180005530.01.T01 | MTR_6g075370 | 42.761 | 297 | 142 | 6 | 29 | 305 | 58 | 346 | 4.06e-72 | 236 |
| MsG0180005530.01.T01 | MTR_4g103430 | 43.092 | 304 | 145 | 7 | 38 | 315 | 69 | 370 | 4.77e-72 | 237 |
| MsG0180005530.01.T01 | MTR_8g042710 | 41.925 | 322 | 151 | 4 | 11 | 306 | 44 | 355 | 5.34e-72 | 235 |
| MsG0180005530.01.T01 | MTR_4g053635 | 46.479 | 284 | 126 | 6 | 56 | 315 | 2 | 283 | 7.27e-72 | 235 |
| MsG0180005530.01.T01 | MTR_4g053630 | 51.724 | 232 | 106 | 4 | 88 | 315 | 31 | 260 | 9.34e-72 | 234 |
| MsG0180005530.01.T01 | MTR_8g042710 | 41.925 | 322 | 151 | 4 | 11 | 306 | 44 | 355 | 2.00e-71 | 235 |
| MsG0180005530.01.T01 | MTR_4g103495 | 42.345 | 307 | 146 | 6 | 38 | 315 | 70 | 374 | 2.51e-70 | 232 |
| MsG0180005530.01.T01 | MTR_4g103490 | 42.105 | 304 | 147 | 7 | 38 | 315 | 73 | 373 | 3.03e-70 | 233 |
| MsG0180005530.01.T01 | MTR_8g033150 | 43.421 | 304 | 138 | 8 | 23 | 305 | 40 | 330 | 3.47e-70 | 231 |
| MsG0180005530.01.T01 | MTR_8g033150 | 43.421 | 304 | 138 | 8 | 23 | 305 | 67 | 357 | 4.97e-70 | 231 |
| MsG0180005530.01.T01 | MTR_8g083220 | 40.810 | 321 | 153 | 6 | 17 | 305 | 62 | 377 | 7.37e-70 | 231 |
| MsG0180005530.01.T01 | MTR_4g103450 | 41.776 | 304 | 150 | 6 | 38 | 315 | 43 | 345 | 8.15e-70 | 231 |
| MsG0180005530.01.T01 | MTR_5g081100 | 45.956 | 272 | 128 | 5 | 35 | 303 | 32 | 287 | 8.43e-70 | 223 |
| MsG0180005530.01.T01 | MTR_3g082200 | 50.704 | 213 | 99 | 3 | 97 | 305 | 18 | 228 | 9.43e-70 | 228 |
| MsG0180005530.01.T01 | MTR_8g042670 | 40.882 | 340 | 150 | 8 | 2 | 306 | 29 | 352 | 1.23e-69 | 230 |
| MsG0180005530.01.T01 | MTR_3g114410 | 41.137 | 299 | 143 | 7 | 37 | 309 | 66 | 357 | 2.52e-69 | 226 |
| MsG0180005530.01.T01 | MTR_3g010080 | 41.049 | 324 | 150 | 10 | 13 | 314 | 45 | 349 | 3.63e-69 | 229 |
| MsG0180005530.01.T01 | MTR_4g103480 | 41.776 | 304 | 150 | 6 | 38 | 315 | 86 | 388 | 3.93e-69 | 229 |
| MsG0180005530.01.T01 | MTR_8g079900 | 44.369 | 293 | 131 | 7 | 38 | 309 | 70 | 351 | 6.47e-69 | 228 |
| MsG0180005530.01.T01 | MTR_6g055570 | 42.333 | 300 | 137 | 8 | 35 | 314 | 67 | 350 | 1.60e-68 | 227 |
| MsG0180005530.01.T01 | MTR_7g034380 | 42.475 | 299 | 136 | 7 | 36 | 314 | 28 | 310 | 2.37e-68 | 226 |
| MsG0180005530.01.T01 | MTR_8g027260 | 41.137 | 299 | 140 | 7 | 36 | 315 | 68 | 349 | 4.21e-68 | 224 |
| MsG0180005530.01.T01 | MTR_2g049200 | 40.896 | 335 | 169 | 6 | 1 | 309 | 33 | 364 | 2.22e-67 | 224 |
| MsG0180005530.01.T01 | MTR_4g103400 | 40.328 | 305 | 153 | 7 | 38 | 315 | 69 | 371 | 2.69e-67 | 224 |
| MsG0180005530.01.T01 | MTR_6g055410 | 41.751 | 297 | 137 | 8 | 38 | 314 | 70 | 350 | 2.76e-67 | 223 |
| MsG0180005530.01.T01 | MTR_4g102400 | 41.284 | 327 | 155 | 8 | 6 | 309 | 46 | 358 | 4.74e-67 | 223 |
| MsG0180005530.01.T01 | MTR_1g007030 | 41.694 | 307 | 142 | 8 | 29 | 314 | 60 | 350 | 2.08e-66 | 221 |
| MsG0180005530.01.T01 | MTR_2g044630 | 42.759 | 290 | 137 | 7 | 38 | 314 | 70 | 343 | 2.71e-66 | 221 |
| MsG0180005530.01.T01 | MTR_1g006990 | 41.558 | 308 | 143 | 8 | 29 | 315 | 60 | 351 | 8.05e-66 | 220 |
| MsG0180005530.01.T01 | MTR_8g006680 | 40.604 | 298 | 141 | 7 | 38 | 315 | 68 | 349 | 1.30e-65 | 219 |
| MsG0180005530.01.T01 | MTR_8g005300 | 40.604 | 298 | 141 | 7 | 38 | 315 | 68 | 349 | 1.30e-65 | 219 |
| MsG0180005530.01.T01 | MTR_8g005640 | 40.604 | 298 | 141 | 7 | 38 | 315 | 68 | 349 | 1.30e-65 | 219 |
| MsG0180005530.01.T01 | MTR_1g048110 | 42.160 | 287 | 131 | 6 | 38 | 306 | 70 | 339 | 5.25e-65 | 218 |
| MsG0180005530.01.T01 | MTR_7g081750 | 39.274 | 303 | 149 | 8 | 38 | 307 | 72 | 372 | 1.84e-64 | 217 |
| MsG0180005530.01.T01 | MTR_5g085690 | 41.558 | 308 | 142 | 8 | 38 | 309 | 70 | 375 | 3.40e-64 | 216 |
| MsG0180005530.01.T01 | MTR_7g081420 | 40.064 | 312 | 148 | 9 | 38 | 315 | 73 | 379 | 5.48e-64 | 216 |
| MsG0180005530.01.T01 | MTR_8g005710 | 39.441 | 322 | 147 | 10 | 22 | 315 | 17 | 318 | 7.48e-64 | 214 |
| MsG0180005530.01.T01 | MTR_7g081500 | 39.672 | 305 | 149 | 8 | 36 | 307 | 70 | 372 | 5.99e-63 | 213 |
| MsG0180005530.01.T01 | MTR_5g011280 | 41.905 | 315 | 141 | 6 | 16 | 310 | 67 | 359 | 4.43e-62 | 210 |
| MsG0180005530.01.T01 | MTR_5g055920 | 47.768 | 224 | 113 | 4 | 95 | 315 | 46 | 268 | 3.13e-61 | 206 |
| MsG0180005530.01.T01 | MTR_5g011260 | 41.896 | 327 | 143 | 6 | 6 | 310 | 55 | 356 | 2.31e-60 | 205 |
| MsG0180005530.01.T01 | MTR_7g081580 | 39.274 | 303 | 149 | 8 | 38 | 307 | 73 | 373 | 4.07e-60 | 205 |
| MsG0180005530.01.T01 | MTR_5g081280 | 41.971 | 274 | 120 | 7 | 35 | 297 | 52 | 297 | 5.04e-60 | 194 |
| MsG0180005530.01.T01 | MTR_4g103495 | 46.222 | 225 | 113 | 4 | 97 | 315 | 3 | 225 | 7.83e-60 | 202 |
| MsG0180005530.01.T01 | MTR_7g481600 | 39.274 | 303 | 149 | 8 | 38 | 307 | 73 | 373 | 8.42e-60 | 204 |
| MsG0180005530.01.T01 | MTR_8g079900 | 48.230 | 226 | 102 | 4 | 88 | 309 | 39 | 253 | 9.07e-60 | 202 |
| MsG0180005530.01.T01 | MTR_3g464790 | 40.860 | 279 | 143 | 8 | 37 | 305 | 65 | 331 | 1.11e-59 | 203 |
| MsG0180005530.01.T01 | MTR_7g081380 | 38.511 | 309 | 151 | 8 | 36 | 307 | 71 | 377 | 1.88e-58 | 201 |
| MsG0180005530.01.T01 | MTR_8g042670 | 46.429 | 224 | 106 | 2 | 86 | 306 | 16 | 228 | 9.95e-58 | 196 |
| MsG0180005530.01.T01 | MTR_5g011270 | 42.202 | 327 | 142 | 7 | 6 | 310 | 55 | 356 | 1.17e-57 | 198 |
| MsG0180005530.01.T01 | MTR_5g011340 | 41.237 | 291 | 137 | 5 | 38 | 308 | 75 | 351 | 8.03e-57 | 196 |
| MsG0180005530.01.T01 | MTR_5g011320 | 40.830 | 289 | 137 | 4 | 38 | 306 | 71 | 345 | 5.87e-56 | 193 |
| MsG0180005530.01.T01 | MTR_3g452290 | 40.520 | 269 | 122 | 7 | 69 | 315 | 3 | 255 | 1.64e-55 | 189 |
| MsG0180005530.01.T01 | MTR_3g451220 | 40.520 | 269 | 122 | 7 | 69 | 315 | 3 | 255 | 1.64e-55 | 189 |
| MsG0180005530.01.T01 | MTR_5g011310 | 41.581 | 291 | 136 | 6 | 38 | 308 | 78 | 354 | 1.04e-54 | 190 |
| MsG0180005530.01.T01 | MTR_5g011190 | 41.869 | 289 | 134 | 7 | 38 | 306 | 78 | 352 | 1.06e-53 | 187 |
| MsG0180005530.01.T01 | MTR_5g011370 | 41.176 | 289 | 136 | 7 | 38 | 306 | 98 | 372 | 1.23e-53 | 187 |
| MsG0180005530.01.T01 | MTR_3g061110 | 36.120 | 299 | 150 | 6 | 38 | 310 | 69 | 352 | 3.39e-53 | 186 |
| MsG0180005530.01.T01 | MTR_3g114160 | 37.829 | 304 | 119 | 8 | 36 | 315 | 2 | 259 | 5.39e-53 | 178 |
| MsG0180005530.01.T01 | MTR_2g042640 | 40.726 | 248 | 112 | 6 | 45 | 273 | 46 | 277 | 3.89e-50 | 176 |
| MsG0180005530.01.T01 | MTR_4g071560 | 35.135 | 296 | 132 | 5 | 38 | 309 | 33 | 292 | 1.14e-47 | 168 |
| MsG0180005530.01.T01 | MTR_2g037850 | 35.410 | 305 | 162 | 7 | 42 | 315 | 90 | 390 | 3.45e-46 | 167 |
| MsG0180005530.01.T01 | MTR_4g127480 | 34.967 | 306 | 162 | 8 | 42 | 315 | 90 | 390 | 2.01e-45 | 164 |
| MsG0180005530.01.T01 | MTR_2g046740 | 34.462 | 325 | 173 | 10 | 17 | 309 | 89 | 405 | 3.19e-43 | 158 |
| MsG0180005530.01.T01 | MTR_2g070250 | 34.629 | 283 | 121 | 8 | 29 | 308 | 60 | 281 | 2.66e-40 | 145 |
| MsG0180005530.01.T01 | MTR_8g092940 | 36.889 | 225 | 111 | 5 | 35 | 243 | 22 | 231 | 2.99e-40 | 141 |
| MsG0180005530.01.T01 | MTR_4g132620 | 31.077 | 325 | 189 | 7 | 12 | 309 | 67 | 383 | 2.08e-39 | 147 |
| MsG0180005530.01.T01 | MTR_8g089230 | 31.561 | 301 | 170 | 9 | 42 | 310 | 118 | 414 | 2.05e-31 | 124 |
| MsG0180005530.01.T01 | MTR_2g042650 | 31.930 | 285 | 121 | 8 | 33 | 314 | 64 | 278 | 1.60e-27 | 112 |
| MsG0180005530.01.T01 | MTR_3g114140 | 40.000 | 150 | 61 | 2 | 163 | 309 | 30 | 153 | 1.65e-21 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005530.01.T01 | AT5G51750 | 69.325 | 326 | 75 | 3 | 1 | 304 | 41 | 363 | 1.41e-155 | 454 |
| MsG0180005530.01.T01 | AT5G67360 | 50.920 | 326 | 129 | 2 | 1 | 306 | 36 | 350 | 1.67e-115 | 350 |
| MsG0180005530.01.T01 | AT3G14240 | 48.182 | 330 | 140 | 3 | 1 | 309 | 32 | 351 | 9.81e-102 | 315 |
| MsG0180005530.01.T01 | AT2G05920 | 48.182 | 330 | 136 | 5 | 1 | 309 | 34 | 349 | 8.10e-100 | 310 |
| MsG0180005530.01.T01 | AT4G34980 | 46.608 | 339 | 142 | 6 | 1 | 315 | 32 | 355 | 1.44e-98 | 307 |
| MsG0180005530.01.T01 | AT3G14067 | 48.024 | 329 | 140 | 4 | 1 | 306 | 37 | 357 | 3.67e-97 | 303 |
| MsG0180005530.01.T01 | AT1G04110 | 46.392 | 291 | 132 | 2 | 40 | 306 | 70 | 360 | 6.53e-85 | 271 |
| MsG0180005530.01.T01 | AT1G01900 | 43.385 | 325 | 161 | 4 | 4 | 305 | 38 | 362 | 5.25e-84 | 269 |
| MsG0180005530.01.T01 | AT4G10550 | 44.156 | 308 | 139 | 5 | 36 | 310 | 11 | 318 | 2.63e-78 | 253 |
| MsG0180005530.01.T01 | AT4G10550 | 44.156 | 308 | 139 | 5 | 36 | 310 | 11 | 318 | 2.63e-78 | 253 |
| MsG0180005530.01.T01 | AT1G20160 | 43.137 | 306 | 138 | 5 | 33 | 311 | 59 | 355 | 4.80e-78 | 248 |
| MsG0180005530.01.T01 | AT4G10550 | 44.156 | 308 | 139 | 5 | 36 | 310 | 67 | 374 | 6.85e-78 | 253 |
| MsG0180005530.01.T01 | AT4G10550 | 44.156 | 308 | 139 | 5 | 36 | 310 | 83 | 390 | 7.22e-78 | 253 |
| MsG0180005530.01.T01 | AT1G20160 | 43.137 | 306 | 138 | 5 | 33 | 311 | 20 | 316 | 3.74e-77 | 250 |
| MsG0180005530.01.T01 | AT1G20160 | 43.137 | 306 | 138 | 5 | 33 | 311 | 59 | 355 | 8.12e-77 | 249 |
| MsG0180005530.01.T01 | AT2G04160 | 44.257 | 296 | 134 | 5 | 39 | 306 | 73 | 365 | 9.88e-77 | 249 |
| MsG0180005530.01.T01 | AT1G32940 | 41.945 | 329 | 156 | 7 | 15 | 310 | 43 | 369 | 1.51e-75 | 243 |
| MsG0180005530.01.T01 | AT4G10520 | 41.846 | 325 | 153 | 8 | 11 | 310 | 48 | 361 | 1.89e-75 | 246 |
| MsG0180005530.01.T01 | AT5G59810 | 42.378 | 328 | 153 | 6 | 7 | 306 | 53 | 372 | 1.30e-74 | 244 |
| MsG0180005530.01.T01 | AT1G32960 | 43.137 | 306 | 141 | 6 | 38 | 310 | 67 | 372 | 1.36e-74 | 244 |
| MsG0180005530.01.T01 | AT1G32940 | 41.945 | 329 | 156 | 7 | 15 | 310 | 43 | 369 | 2.78e-74 | 243 |
| MsG0180005530.01.T01 | AT5G45650 | 39.831 | 354 | 153 | 8 | 10 | 309 | 40 | 387 | 3.06e-74 | 243 |
| MsG0180005530.01.T01 | AT5G45650 | 39.831 | 354 | 153 | 8 | 10 | 309 | 40 | 387 | 3.06e-74 | 243 |
| MsG0180005530.01.T01 | AT1G32940 | 42.415 | 323 | 147 | 7 | 21 | 310 | 2 | 318 | 3.33e-74 | 242 |
| MsG0180005530.01.T01 | AT1G32940 | 42.415 | 323 | 147 | 7 | 21 | 310 | 2 | 318 | 3.33e-74 | 242 |
| MsG0180005530.01.T01 | AT4G10530 | 41.945 | 329 | 151 | 9 | 11 | 310 | 48 | 365 | 5.11e-74 | 242 |
| MsG0180005530.01.T01 | AT5G03620 | 43.299 | 291 | 140 | 4 | 34 | 306 | 65 | 348 | 6.80e-74 | 238 |
| MsG0180005530.01.T01 | AT5G67090 | 39.820 | 334 | 160 | 5 | 1 | 305 | 29 | 350 | 1.27e-72 | 238 |
| MsG0180005530.01.T01 | AT5G03620 | 43.902 | 287 | 136 | 4 | 38 | 306 | 69 | 348 | 2.46e-72 | 238 |
| MsG0180005530.01.T01 | AT4G00230 | 48.432 | 287 | 122 | 6 | 38 | 306 | 71 | 349 | 8.40e-72 | 233 |
| MsG0180005530.01.T01 | AT5G59190 | 46.341 | 287 | 119 | 7 | 41 | 309 | 32 | 301 | 1.28e-71 | 234 |
| MsG0180005530.01.T01 | AT1G66210 | 42.244 | 303 | 141 | 6 | 39 | 310 | 76 | 375 | 2.82e-71 | 235 |
| MsG0180005530.01.T01 | AT4G10540 | 42.574 | 303 | 141 | 6 | 41 | 310 | 68 | 370 | 3.20e-71 | 235 |
| MsG0180005530.01.T01 | AT4G00230 | 48.432 | 287 | 122 | 6 | 38 | 306 | 71 | 349 | 1.44e-70 | 233 |
| MsG0180005530.01.T01 | AT5G58840 | 41.830 | 306 | 139 | 7 | 30 | 314 | 61 | 348 | 1.87e-70 | 226 |
| MsG0180005530.01.T01 | AT1G66220 | 43.709 | 302 | 141 | 7 | 38 | 310 | 72 | 373 | 4.67e-70 | 231 |
| MsG0180005530.01.T01 | AT5G58840 | 41.830 | 306 | 139 | 7 | 30 | 314 | 61 | 348 | 1.01e-69 | 226 |
| MsG0180005530.01.T01 | AT4G10510 | 41.528 | 301 | 145 | 6 | 41 | 310 | 1 | 301 | 4.14e-69 | 228 |
| MsG0180005530.01.T01 | AT5G59120 | 41.558 | 308 | 137 | 7 | 30 | 314 | 57 | 344 | 4.68e-69 | 228 |
| MsG0180005530.01.T01 | AT4G10510 | 41.528 | 301 | 145 | 6 | 41 | 310 | 16 | 316 | 6.84e-69 | 228 |
| MsG0180005530.01.T01 | AT1G32950 | 43.182 | 308 | 143 | 6 | 35 | 310 | 10 | 317 | 8.29e-69 | 228 |
| MsG0180005530.01.T01 | AT4G10510 | 41.528 | 301 | 145 | 6 | 41 | 310 | 72 | 372 | 1.14e-68 | 228 |
| MsG0180005530.01.T01 | AT4G10510 | 41.528 | 301 | 145 | 6 | 41 | 310 | 60 | 360 | 1.29e-68 | 228 |
| MsG0180005530.01.T01 | AT1G32950 | 43.182 | 308 | 143 | 6 | 35 | 310 | 61 | 368 | 1.33e-68 | 228 |
| MsG0180005530.01.T01 | AT5G58840 | 41.830 | 306 | 139 | 7 | 30 | 314 | 61 | 348 | 1.97e-68 | 226 |
| MsG0180005530.01.T01 | AT4G21630 | 38.261 | 345 | 162 | 10 | 7 | 310 | 52 | 386 | 2.06e-68 | 227 |
| MsG0180005530.01.T01 | AT4G21650 | 38.973 | 331 | 155 | 10 | 27 | 310 | 63 | 393 | 2.28e-67 | 224 |
| MsG0180005530.01.T01 | AT5G59090 | 42.667 | 300 | 129 | 8 | 38 | 314 | 66 | 345 | 4.58e-67 | 223 |
| MsG0180005530.01.T01 | AT5G59090 | 42.667 | 300 | 129 | 8 | 38 | 314 | 66 | 345 | 5.25e-67 | 223 |
| MsG0180005530.01.T01 | AT5G59090 | 43.667 | 300 | 124 | 10 | 38 | 314 | 66 | 343 | 1.08e-66 | 222 |
| MsG0180005530.01.T01 | AT4G26330 | 41.722 | 302 | 143 | 9 | 35 | 303 | 15 | 316 | 1.45e-66 | 222 |
| MsG0180005530.01.T01 | AT4G15040 | 41.026 | 312 | 143 | 6 | 22 | 314 | 17 | 306 | 1.29e-65 | 218 |
| MsG0180005530.01.T01 | AT4G15040 | 41.026 | 312 | 143 | 6 | 22 | 314 | 17 | 306 | 1.29e-65 | 218 |
| MsG0180005530.01.T01 | AT5G58830 | 39.610 | 308 | 143 | 7 | 30 | 314 | 59 | 346 | 1.38e-65 | 219 |
| MsG0180005530.01.T01 | AT4G21640 | 38.629 | 321 | 155 | 8 | 27 | 305 | 63 | 383 | 3.16e-64 | 216 |
| MsG0180005530.01.T01 | AT1G20150 | 39.590 | 293 | 140 | 4 | 42 | 304 | 66 | 351 | 7.03e-64 | 215 |
| MsG0180005530.01.T01 | AT5G58820 | 41.234 | 308 | 138 | 8 | 30 | 314 | 55 | 342 | 1.05e-63 | 214 |
| MsG0180005530.01.T01 | AT3G46840 | 40.134 | 299 | 145 | 6 | 38 | 314 | 68 | 354 | 2.00e-63 | 213 |
| MsG0180005530.01.T01 | AT5G59130 | 38.235 | 306 | 149 | 7 | 30 | 314 | 22 | 308 | 4.84e-63 | 212 |
| MsG0180005530.01.T01 | AT5G59130 | 38.235 | 306 | 149 | 7 | 30 | 314 | 61 | 347 | 5.79e-63 | 212 |
| MsG0180005530.01.T01 | AT5G59130 | 38.235 | 306 | 149 | 7 | 30 | 314 | 61 | 347 | 7.25e-63 | 212 |
| MsG0180005530.01.T01 | AT4G26330 | 39.873 | 316 | 143 | 10 | 35 | 303 | 15 | 330 | 8.20e-63 | 212 |
| MsG0180005530.01.T01 | AT5G59100 | 40.468 | 299 | 142 | 8 | 38 | 314 | 68 | 352 | 2.86e-61 | 207 |
| MsG0180005530.01.T01 | AT5G11940 | 38.487 | 304 | 154 | 6 | 39 | 310 | 73 | 375 | 4.31e-61 | 207 |
| MsG0180005530.01.T01 | AT5G59130 | 37.908 | 306 | 146 | 8 | 30 | 314 | 61 | 343 | 1.13e-60 | 206 |
| MsG0180005530.01.T01 | AT3G46850 | 39.333 | 300 | 147 | 8 | 38 | 314 | 67 | 354 | 2.44e-60 | 205 |
| MsG0180005530.01.T01 | AT4G21326 | 38.411 | 302 | 156 | 5 | 38 | 310 | 13 | 313 | 7.05e-60 | 203 |
| MsG0180005530.01.T01 | AT5G45640 | 37.082 | 329 | 142 | 8 | 37 | 306 | 26 | 348 | 3.28e-59 | 202 |
| MsG0180005530.01.T01 | AT4G21323 | 38.944 | 303 | 155 | 7 | 38 | 310 | 115 | 417 | 1.23e-56 | 196 |
| MsG0180005530.01.T01 | AT5G44530 | 33.628 | 339 | 176 | 10 | 3 | 309 | 80 | 401 | 1.67e-50 | 177 |
| MsG0180005530.01.T01 | AT4G20430 | 35.786 | 299 | 159 | 7 | 42 | 309 | 119 | 415 | 5.75e-50 | 177 |
| MsG0180005530.01.T01 | AT4G20430 | 35.786 | 299 | 159 | 7 | 42 | 309 | 119 | 415 | 6.64e-50 | 177 |
| MsG0180005530.01.T01 | AT4G20430 | 35.786 | 299 | 159 | 7 | 42 | 309 | 119 | 415 | 6.64e-50 | 177 |
| MsG0180005530.01.T01 | AT5G44530 | 33.628 | 339 | 176 | 10 | 3 | 309 | 80 | 401 | 7.39e-50 | 177 |
| MsG0180005530.01.T01 | AT5G44530 | 33.628 | 339 | 176 | 10 | 3 | 309 | 80 | 401 | 8.97e-50 | 177 |
| MsG0180005530.01.T01 | AT2G19170 | 35.905 | 337 | 172 | 9 | 18 | 315 | 55 | 386 | 9.14e-50 | 177 |
| MsG0180005530.01.T01 | AT2G19170 | 35.905 | 337 | 172 | 9 | 18 | 315 | 55 | 386 | 9.14e-50 | 177 |
| MsG0180005530.01.T01 | AT4G30020 | 37.134 | 307 | 155 | 8 | 42 | 315 | 86 | 387 | 4.77e-46 | 166 |
| MsG0180005530.01.T01 | AT4G30020 | 37.134 | 307 | 155 | 8 | 42 | 315 | 86 | 387 | 4.77e-46 | 166 |
| MsG0180005530.01.T01 | AT4G30020 | 37.134 | 307 | 155 | 8 | 42 | 315 | 86 | 387 | 4.77e-46 | 166 |
| MsG0180005530.01.T01 | AT4G30020 | 37.134 | 307 | 155 | 8 | 42 | 315 | 86 | 387 | 4.77e-46 | 166 |
| MsG0180005530.01.T01 | AT1G30600 | 34.000 | 300 | 162 | 8 | 42 | 309 | 98 | 393 | 3.35e-44 | 161 |
| MsG0180005530.01.T01 | AT2G39850 | 35.959 | 292 | 145 | 9 | 41 | 303 | 65 | 343 | 2.24e-42 | 156 |
| MsG0180005530.01.T01 | AT1G32970 | 49.091 | 165 | 75 | 3 | 155 | 310 | 166 | 330 | 1.27e-41 | 153 |
| MsG0180005530.01.T01 | AT1G62340 | 33.223 | 301 | 167 | 7 | 42 | 309 | 98 | 397 | 1.02e-40 | 151 |
Find 67 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGTTCAGCTGGAAATTC+AGG | 0.240133 | 1:-92902643 | MsG0180005530.01.T01:CDS |
| GTGAAACTGGTAGGGGATTC+AGG | 0.259246 | 1:-92903556 | MsG0180005530.01.T01:CDS |
| GTTCATGGTGCTAATCTTCT+TGG | 0.267962 | 1:-92903377 | MsG0180005530.01.T01:CDS |
| GAGTCTTGGACACTGGTATT+TGG | 0.277631 | 1:-92903643 | MsG0180005530.01.T01:CDS |
| TGTAGTTGGTACTTTGTATC+AGG | 0.278232 | 1:+92903760 | None:intergenic |
| GTACTTTGTATCAGGGAATA+TGG | 0.299507 | 1:+92903768 | None:intergenic |
| AGTTTATCTGTAGCTTCATT+TGG | 0.341083 | 1:-92902691 | MsG0180005530.01.T01:CDS |
| TAAATCAGTAGAAGCTGAAA+TGG | 0.371819 | 1:-92903905 | MsG0180005530.01.T01:CDS |
| CCATGACCATCTTGATCTCT+TGG | 0.381927 | 1:+92903434 | None:intergenic |
| AATCTTCTTGGTTATGCCTA+TGG | 0.387556 | 1:-92903365 | MsG0180005530.01.T01:CDS |
| TCAGGAGCATCAATCTATAA+AGG | 0.389240 | 1:-92902507 | None:intergenic |
| AGTGAGAGTTTCATTGATAC+AGG | 0.401477 | 1:-92903614 | MsG0180005530.01.T01:CDS |
| CACACTGCAGCTACTGTTGC+CGG | 0.410503 | 1:-92903407 | MsG0180005530.01.T01:CDS |
| GTTGCCGGATCTCCGGTTCA+TGG | 0.413429 | 1:-92903392 | MsG0180005530.01.T01:CDS |
| CATTCCTCTTGCTGTTCCAT+AGG | 0.422540 | 1:+92903349 | None:intergenic |
| TTCATTTGGAGCAATGGAAA+AGG | 0.428283 | 1:-92902677 | MsG0180005530.01.T01:CDS |
| AGCTACTGTTGCCGGATCTC+CGG | 0.449003 | 1:-92903399 | MsG0180005530.01.T01:CDS |
| TGGAAAGGTGCATGTGAAAC+TGG | 0.450416 | 1:-92903569 | MsG0180005530.01.T01:CDS |
| TTATCCATCTCTTTAGGTGG+TGG | 0.450538 | 1:-92902736 | MsG0180005530.01.T01:CDS |
| ATAGTTGGAGTCTTGGACAC+TGG | 0.453634 | 1:-92903650 | MsG0180005530.01.T01:CDS |
| CACTGCAATAAGAAGATTGT+AGG | 0.458318 | 1:-92903527 | MsG0180005530.01.T01:CDS |
| TGATGTTATAGTTGGAGTCT+TGG | 0.459644 | 1:-92903657 | MsG0180005530.01.T01:CDS |
| GCAGATGTTAGCCTTGGAAA+TGG | 0.460229 | 1:-92902541 | MsG0180005530.01.T01:CDS |
| AAGCTACAGATAAACTATCA+TGG | 0.467658 | 1:+92902698 | None:intergenic |
| CCTTTCCAGTGAGAAGGTAC+TGG | 0.468930 | 1:+92903584 | None:intergenic |
| TGGTGACTGGAAAAGATGTC+TGG | 0.471958 | 1:+92903964 | None:intergenic |
| TTTCCTGCAGATGTTAGCCT+TGG | 0.473741 | 1:-92902547 | MsG0180005530.01.T01:CDS |
| AGCACCATGAACCGGAGATC+CGG | 0.473779 | 1:+92903388 | None:intergenic |
| GCTAACCATGATGTTATAGT+TGG | 0.475358 | 1:-92903665 | MsG0180005530.01.T01:CDS |
| CTGTTGCTGCTTCATATCCA+TGG | 0.481970 | 1:+92903489 | None:intergenic |
| CATGGATATGAAGCAGCAAC+AGG | 0.490558 | 1:-92903488 | MsG0180005530.01.T01:CDS |
| GAAACATTTGTGAGACTGAC+AGG | 0.491134 | 1:+92902613 | None:intergenic |
| TTTGTGAGACTGACAGGGTC+AGG | 0.495230 | 1:+92902619 | None:intergenic |
| TGTAGCTTCATTTGGAGCAA+TGG | 0.496713 | 1:-92902683 | MsG0180005530.01.T01:CDS |
| TCATTTGGAGCAATGGAAAA+GGG | 0.512583 | 1:-92902676 | MsG0180005530.01.T01:CDS |
| AGAAGATTAGCACCATGAAC+CGG | 0.523555 | 1:+92903380 | None:intergenic |
| TTTCCAAGGCTAACATCTGC+AGG | 0.523747 | 1:+92902544 | None:intergenic |
| TCAATGAAACTCTCACTCTC+AGG | 0.530295 | 1:+92903620 | None:intergenic |
| TGAATACCACTCTTGGTGAC+TGG | 0.541249 | 1:+92903951 | None:intergenic |
| AAGGTGCATGTGAAACTGGT+AGG | 0.542313 | 1:-92903565 | MsG0180005530.01.T01:CDS |
| GCTCCAACCGTGGTGATCCA+TGG | 0.546621 | 1:+92902589 | None:intergenic |
| TTGCAGCTTACAAAGTGTGT+TGG | 0.551123 | 1:-92902828 | MsG0180005530.01.T01:CDS |
| AGGTGCATGTGAAACTGGTA+GGG | 0.554316 | 1:-92903564 | MsG0180005530.01.T01:CDS |
| AGCTACAGATAAACTATCAT+GGG | 0.558604 | 1:+92902699 | None:intergenic |
| GACTCCACCACCTAAAGAGA+TGG | 0.565490 | 1:+92902732 | None:intergenic |
| TCACCATGGATCACCACGGT+TGG | 0.567091 | 1:-92902592 | MsG0180005530.01.T01:CDS |
| TGAAACCAGTACCTTCTCAC+TGG | 0.571834 | 1:-92903589 | MsG0180005530.01.T01:CDS |
| CCAAGAGATCAAGATGGTCA+TGG | 0.573050 | 1:-92903434 | MsG0180005530.01.T01:CDS |
| GCTTACAAAGTGTGTTGGAC+TGG | 0.581550 | 1:-92902823 | MsG0180005530.01.T01:CDS |
| TCAAAACACCAACAGAAGCT+GGG | 0.582447 | 1:-92903699 | MsG0180005530.01.T01:intron |
| CATTGTGCTAGCTCCAACCG+TGG | 0.583490 | 1:+92902579 | None:intergenic |
| GTAGTTGGTACTTTGTATCA+GGG | 0.591469 | 1:+92903761 | None:intergenic |
| TATGCCTATGGAACAGCAAG+AGG | 0.591767 | 1:-92903353 | MsG0180005530.01.T01:CDS |
| TACAAAGTGTGTTGGACTGG+TGG | 0.597149 | 1:-92902820 | MsG0180005530.01.T01:CDS |
| CTATGGAACAGCAAGAGGAA+TGG | 0.598450 | 1:-92903348 | MsG0180005530.01.T01:CDS |
| GTTGATACAGCTGTAGCTGA+TGG | 0.601842 | 1:-92902769 | MsG0180005530.01.T01:CDS |
| CATGCACCTTTCCAGTGAGA+AGG | 0.602893 | 1:+92903578 | None:intergenic |
| ACAGCAAGAGGAATGGCACC+AGG | 0.615072 | 1:-92903341 | MsG0180005530.01.T01:intron |
| AGACTCCAACTATAACATCA+TGG | 0.615813 | 1:+92903660 | None:intergenic |
| CCAGTACCTTCTCACTGGAA+AGG | 0.621307 | 1:-92903584 | MsG0180005530.01.T01:CDS |
| GGTGCATGTGAAACTGGTAG+GGG | 0.639627 | 1:-92903563 | MsG0180005530.01.T01:CDS |
| CACGGTTGGAGCTAGCACAA+TGG | 0.640840 | 1:-92902578 | MsG0180005530.01.T01:CDS |
| GTCTCACAAATGTTTCACCA+TGG | 0.646444 | 1:-92902606 | MsG0180005530.01.T01:CDS |
| AAATCACCAAGAGATCAAGA+TGG | 0.659141 | 1:-92903440 | MsG0180005530.01.T01:CDS |
| GGTGCAAGAATATTCTACCA+TGG | 0.660702 | 1:-92903506 | MsG0180005530.01.T01:CDS |
| AAACATTTGTGAGACTGACA+GGG | 0.693774 | 1:+92902614 | None:intergenic |
| TGTTTCACCATGGATCACCA+CGG | 0.715840 | 1:-92902596 | MsG0180005530.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAACCATCTTTTATTTTTA+TGG | - | Chr1:92903426-92903445 | MsG0180005530.01.T01:CDS | 15.0% |
| !! | AACATAAAGATAGTATTAGA+TGG | + | Chr1:92903565-92903584 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTAGTAATACC+TGG | + | Chr1:92903172-92903191 | None:intergenic | 20.0% |
| !!! | CTTTTTTAAATTTTCCAATC+TGG | + | Chr1:92903357-92903376 | None:intergenic | 20.0% |
| ! | AGTTCATATGAAAATGAAGA+AGG | - | Chr1:92903232-92903251 | MsG0180005530.01.T01:intron | 25.0% |
| ! | TTAACCATGCATTATCTTTA+TGG | - | Chr1:92903493-92903512 | MsG0180005530.01.T01:CDS | 25.0% |
| !! | AATGTTTTATCCATCTCTTT+AGG | - | Chr1:92903750-92903769 | MsG0180005530.01.T01:intron | 25.0% |
| !!! | CCATCTTTTATTTTTATGGA+CGG | - | Chr1:92903430-92903449 | MsG0180005530.01.T01:CDS | 25.0% |
| AAGCTACAGATAAACTATCA+TGG | + | Chr1:92903797-92903816 | None:intergenic | 30.0% | |
| AGCTACAGATAAACTATCAT+GGG | + | Chr1:92903796-92903815 | None:intergenic | 30.0% | |
| AGTTTATCTGTAGCTTCATT+TGG | - | Chr1:92903801-92903820 | MsG0180005530.01.T01:CDS | 30.0% | |
| CATCCATTATCTTTATGTAC+AGG | - | Chr1:92903633-92903652 | MsG0180005530.01.T01:CDS | 30.0% | |
| CCGTCCATAAAAATAAAAGA+TGG | + | Chr1:92903433-92903452 | None:intergenic | 30.0% | |
| GAAATGGAACAAAAATTCTC+AGG | - | Chr1:92903967-92903986 | MsG0180005530.01.T01:CDS | 30.0% | |
| TAAATCAGTAGAAGCTGAAA+TGG | - | Chr1:92902587-92902606 | MsG0180005530.01.T01:CDS | 30.0% | |
| TGTTTAGTACAATTCCAGAT+TGG | - | Chr1:92903340-92903359 | MsG0180005530.01.T01:intron | 30.0% | |
| ! | GAATTTTTGTTCCATTTCCA+AGG | + | Chr1:92903965-92903984 | None:intergenic | 30.0% |
| !! | CTGTACATAAAGATAATGGA+TGG | + | Chr1:92903635-92903654 | None:intergenic | 30.0% |
| AAACATTTGTGAGACTGACA+GGG | + | Chr1:92903881-92903900 | None:intergenic | 35.0% | |
| AAATCACCAAGAGATCAAGA+TGG | - | Chr1:92903052-92903071 | MsG0180005530.01.T01:intron | 35.0% | |
| AACAAGAGTCCATATTTCCT+TGG | - | Chr1:92902758-92902777 | MsG0180005530.01.T01:CDS | 35.0% | |
| AATCTTCTTGGTTATGCCTA+TGG | - | Chr1:92903127-92903146 | MsG0180005530.01.T01:intron | 35.0% | |
| AGACTCCAACTATAACATCA+TGG | + | Chr1:92902835-92902854 | None:intergenic | 35.0% | |
| AGTGAGAGTTTCATTGATAC+AGG | - | Chr1:92902878-92902897 | MsG0180005530.01.T01:intron | 35.0% | |
| CACTGCAATAAGAAGATTGT+AGG | - | Chr1:92902965-92902984 | MsG0180005530.01.T01:intron | 35.0% | |
| CTGTCCATAAAGATAATGCA+TGG | + | Chr1:92903500-92903519 | None:intergenic | 35.0% | |
| GCACCTGTACATAAAGATAA+TGG | + | Chr1:92903639-92903658 | None:intergenic | 35.0% | |
| GCTAACCATGATGTTATAGT+TGG | - | Chr1:92902827-92902846 | MsG0180005530.01.T01:CDS | 35.0% | |
| GTACTTTGTATCAGGGAATA+TGG | + | Chr1:92902727-92902746 | None:intergenic | 35.0% | |
| TGATGTTATAGTTGGAGTCT+TGG | - | Chr1:92902835-92902854 | MsG0180005530.01.T01:CDS | 35.0% | |
| ! | AAAAAGCTAGAATCTGAAGC+TGG | - | Chr1:92902693-92902712 | MsG0180005530.01.T01:CDS | 35.0% |
| ! | CTTTTGATGAATACCACTCT+TGG | + | Chr1:92902551-92902570 | None:intergenic | 35.0% |
| ! | GTAGTTGGTACTTTGTATCA+GGG | + | Chr1:92902734-92902753 | None:intergenic | 35.0% |
| ! | GTTTTATCCATCTCTTTAGG+TGG | - | Chr1:92903753-92903772 | MsG0180005530.01.T01:intron | 35.0% |
| ! | TCATTTGGAGCAATGGAAAA+GGG | - | Chr1:92903816-92903835 | MsG0180005530.01.T01:CDS | 35.0% |
| ! | TGTAGTTGGTACTTTGTATC+AGG | + | Chr1:92902735-92902754 | None:intergenic | 35.0% |
| ! | TTCATTTGGAGCAATGGAAA+AGG | - | Chr1:92903815-92903834 | MsG0180005530.01.T01:CDS | 35.0% |
| ! | TTTGAATTGGTTCAAGACCA+AGG | + | Chr1:92902778-92902797 | None:intergenic | 35.0% |
| !! | CTTCTGTTGGTGTTTTGAAT+TGG | + | Chr1:92902791-92902810 | None:intergenic | 35.0% |
| !! | GTTTTTGTTTCATGTTCAGC+TGG | - | Chr1:92903840-92903859 | MsG0180005530.01.T01:CDS | 35.0% |
| !!! | TTTTTAGCTTCTGCCTTGTA+TGG | + | Chr1:92903401-92903420 | None:intergenic | 35.0% |
| ACATATCTTCCAGCTTTGCA+TGG | + | Chr1:92903323-92903342 | None:intergenic | 40.0% | |
| AGAAGATTAGCACCATGAAC+CGG | + | Chr1:92903115-92903134 | None:intergenic | 40.0% | |
| CATATCTTCCAGCTTTGCAT+GGG | + | Chr1:92903322-92903341 | None:intergenic | 40.0% | |
| GAAACATTTGTGAGACTGAC+AGG | + | Chr1:92903882-92903901 | None:intergenic | 40.0% | |
| GGTGCAAGAATATTCTACCA+TGG | - | Chr1:92902986-92903005 | MsG0180005530.01.T01:intron | 40.0% | |
| GGTTCAAGACCAAGGAAATA+TGG | + | Chr1:92902770-92902789 | None:intergenic | 40.0% | |
| GTCTCACAAATGTTTCACCA+TGG | - | Chr1:92903886-92903905 | MsG0180005530.01.T01:CDS | 40.0% | |
| TCAAAACACCAACAGAAGCT+GGG | - | Chr1:92902793-92902812 | MsG0180005530.01.T01:CDS | 40.0% | |
| TCAATGAAACTCTCACTCTC+AGG | + | Chr1:92902875-92902894 | None:intergenic | 40.0% | |
| TCATGTTCAGCTGGAAATTC+AGG | - | Chr1:92903849-92903868 | MsG0180005530.01.T01:CDS | 40.0% | |
| TTATCCATCTCTTTAGGTGG+TGG | - | Chr1:92903756-92903775 | MsG0180005530.01.T01:intron | 40.0% | |
| TTCAAAACACCAACAGAAGC+TGG | - | Chr1:92902792-92902811 | MsG0180005530.01.T01:CDS | 40.0% | |
| TTGCAGCTTACAAAGTGTGT+TGG | - | Chr1:92903664-92903683 | MsG0180005530.01.T01:CDS | 40.0% | |
| ! | GTTCATGGTGCTAATCTTCT+TGG | - | Chr1:92903115-92903134 | MsG0180005530.01.T01:intron | 40.0% |
| ! | TGTAGCTTCATTTGGAGCAA+TGG | - | Chr1:92903809-92903828 | MsG0180005530.01.T01:CDS | 40.0% |
| !! | AGTTACAGCACTGCTTTTCA+TGG | - | Chr1:92902639-92902658 | MsG0180005530.01.T01:CDS | 40.0% |
| !! | CATAGTTTTGCCACCATACA+AGG | - | Chr1:92903385-92903404 | MsG0180005530.01.T01:CDS | 40.0% |
| AAGGTGCATGTGAAACTGGT+AGG | - | Chr1:92902927-92902946 | MsG0180005530.01.T01:intron | 45.0% | |
| AGGTGCATGTGAAACTGGTA+GGG | - | Chr1:92902928-92902947 | MsG0180005530.01.T01:intron | 45.0% | |
| ATAGTTGGAGTCTTGGACAC+TGG | - | Chr1:92902842-92902861 | MsG0180005530.01.T01:intron | 45.0% | |
| CATGGATATGAAGCAGCAAC+AGG | - | Chr1:92903004-92903023 | MsG0180005530.01.T01:intron | 45.0% | |
| CCAAGAGATCAAGATGGTCA+TGG | - | Chr1:92903058-92903077 | MsG0180005530.01.T01:intron | 45.0% | |
| CCATGACCATCTTGATCTCT+TGG | + | Chr1:92903061-92903080 | None:intergenic | 45.0% | |
| CTATGGAACAGCAAGAGGAA+TGG | - | Chr1:92903144-92903163 | MsG0180005530.01.T01:intron | 45.0% | |
| CTCTAATTCCCATGCAAAGC+TGG | - | Chr1:92903311-92903330 | MsG0180005530.01.T01:intron | 45.0% | |
| GAGTCTTGGACACTGGTATT+TGG | - | Chr1:92902849-92902868 | MsG0180005530.01.T01:intron | 45.0% | |
| GCTTACAAAGTGTGTTGGAC+TGG | - | Chr1:92903669-92903688 | MsG0180005530.01.T01:CDS | 45.0% | |
| GTTGATACAGCTGTAGCTGA+TGG | - | Chr1:92903723-92903742 | MsG0180005530.01.T01:intron | 45.0% | |
| TATGCCTATGGAACAGCAAG+AGG | - | Chr1:92903139-92903158 | MsG0180005530.01.T01:intron | 45.0% | |
| TGAAACCAGTACCTTCTCAC+TGG | - | Chr1:92902903-92902922 | MsG0180005530.01.T01:intron | 45.0% | |
| TGGTGACTGGAAAAGATGTC+TGG | + | Chr1:92902531-92902550 | None:intergenic | 45.0% | |
| TGTTTCACCATGGATCACCA+CGG | - | Chr1:92903896-92903915 | MsG0180005530.01.T01:CDS | 45.0% | |
| TTAGCTTCTGCCTTGTATGG+TGG | + | Chr1:92903398-92903417 | None:intergenic | 45.0% | |
| TTTCCAAGGCTAACATCTGC+AGG | + | Chr1:92903951-92903970 | None:intergenic | 45.0% | |
| ! | CTGTTGCTGCTTCATATCCA+TGG | + | Chr1:92903006-92903025 | None:intergenic | 45.0% |
| ! | GGACTCTTGTTGTGTGTAGT+TGG | + | Chr1:92902749-92902768 | None:intergenic | 45.0% |
| ! | TACAAAGTGTGTTGGACTGG+TGG | - | Chr1:92903672-92903691 | MsG0180005530.01.T01:CDS | 45.0% |
| ! | TCTTTTCCAGTCACCAAGAG+TGG | - | Chr1:92902535-92902554 | MsG0180005530.01.T01:CDS | 45.0% |
| ! | TGAATACCACTCTTGGTGAC+TGG | + | Chr1:92902544-92902563 | None:intergenic | 45.0% |
| ! | TGGAAAGGTGCATGTGAAAC+TGG | - | Chr1:92902923-92902942 | MsG0180005530.01.T01:intron | 45.0% |
| ! | TTTCCTGCAGATGTTAGCCT+TGG | - | Chr1:92903945-92903964 | MsG0180005530.01.T01:CDS | 45.0% |
| ! | TTTTTCTGCCCAGCTTCTGT+TGG | + | Chr1:92902804-92902823 | None:intergenic | 45.0% |
| !! | CAGCACTGCTTTTCATGGAA+TGG | - | Chr1:92902644-92902663 | MsG0180005530.01.T01:CDS | 45.0% |
| !! | CATTCCTCTTGCTGTTCCAT+AGG | + | Chr1:92903146-92903165 | None:intergenic | 45.0% |
| !! | GCAGATGTTAGCCTTGGAAA+TGG | - | Chr1:92903951-92903970 | MsG0180005530.01.T01:CDS | 45.0% |
| CATGCACCTTTCCAGTGAGA+AGG | + | Chr1:92902917-92902936 | None:intergenic | 50.0% | |
| CCAGTACCTTCTCACTGGAA+AGG | - | Chr1:92902908-92902927 | MsG0180005530.01.T01:intron | 50.0% | |
| GACTCCACCACCTAAAGAGA+TGG | + | Chr1:92903763-92903782 | None:intergenic | 50.0% | |
| GGTGCATGTGAAACTGGTAG+GGG | - | Chr1:92902929-92902948 | MsG0180005530.01.T01:intron | 50.0% | |
| GTGAAACTGGTAGGGGATTC+AGG | - | Chr1:92902936-92902955 | MsG0180005530.01.T01:intron | 50.0% | |
| TTTGTGAGACTGACAGGGTC+AGG | + | Chr1:92903876-92903895 | None:intergenic | 50.0% | |
| ! | CCTTTCCAGTGAGAAGGTAC+TGG | + | Chr1:92902911-92902930 | None:intergenic | 50.0% |
| ACAGCAAGAGGAATGGCACC+AGG | - | Chr1:92903151-92903170 | MsG0180005530.01.T01:intron | 55.0% | |
| AGCACCATGAACCGGAGATC+CGG | + | Chr1:92903107-92903126 | None:intergenic | 55.0% | |
| AGCTACTGTTGCCGGATCTC+CGG | - | Chr1:92903093-92903112 | MsG0180005530.01.T01:intron | 55.0% | |
| CACACTGCAGCTACTGTTGC+CGG | - | Chr1:92903085-92903104 | MsG0180005530.01.T01:intron | 55.0% | |
| CACGGTTGGAGCTAGCACAA+TGG | - | Chr1:92903914-92903933 | MsG0180005530.01.T01:CDS | 55.0% | |
| CATTGTGCTAGCTCCAACCG+TGG | + | Chr1:92903916-92903935 | None:intergenic | 55.0% | |
| TCACCATGGATCACCACGGT+TGG | - | Chr1:92903900-92903919 | MsG0180005530.01.T01:CDS | 55.0% | |
| GCTCCAACCGTGGTGATCCA+TGG | + | Chr1:92903906-92903925 | None:intergenic | 60.0% | |
| GTTGCCGGATCTCCGGTTCA+TGG | - | Chr1:92903100-92903119 | MsG0180005530.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 92902510 | 92904004 | 92902510 | ID=MsG0180005530.01;Name=MsG0180005530.01 |
| Chr1 | mRNA | 92902510 | 92904004 | 92902510 | ID=MsG0180005530.01.T01;Parent=MsG0180005530.01;Name=MsG0180005530.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0.5|0.33|1|1|1|3|0|315 |
| Chr1 | exon | 92902510 | 92902859 | 92902510 | ID=MsG0180005530.01.T01:exon:49825;Parent=MsG0180005530.01.T01 |
| Chr1 | exon | 92903342 | 92903706 | 92903342 | ID=MsG0180005530.01.T01:exon:49824;Parent=MsG0180005530.01.T01 |
| Chr1 | exon | 92903772 | 92904004 | 92903772 | ID=MsG0180005530.01.T01:exon:49823;Parent=MsG0180005530.01.T01 |
| Chr1 | CDS | 92903772 | 92904004 | 92903772 | ID=MsG0180005530.01.T01:cds;Parent=MsG0180005530.01.T01 |
| Chr1 | CDS | 92903342 | 92903706 | 92903342 | ID=MsG0180005530.01.T01:cds;Parent=MsG0180005530.01.T01 |
| Chr1 | CDS | 92902510 | 92902859 | 92902510 | ID=MsG0180005530.01.T01:cds;Parent=MsG0180005530.01.T01 |
| Gene Sequence |
| Protein sequence |
