AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003549.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003549.01.T01 MTR_1g064300 95.789 95 4 0 7 101 631 725 3.33e-54 181
MsG0180003549.01.T01 MTR_1g442830 95.789 95 4 0 7 101 819 913 6.93e-54 181
MsG0180003549.01.T01 MTR_1g064300 95.789 95 4 0 7 101 837 931 1.16e-53 180
MsG0180003549.01.T02 MTR_1g442820 85.333 75 11 0 299 373 517 591 5.07e-35 135
MsG0180003549.01.T02 MTR_1g442820 96.825 63 2 0 246 308 364 426 2.52e-33 130
MsG0180003549.01.T02 MTR_1g442820 57.353 136 31 2 131 240 82 216 3.16e-13 71.2
MsG0180003549.01.T02 MTR_1g064300 96.825 63 2 0 246 308 573 635 1.51e-33 132
MsG0180003549.01.T02 MTR_1g064300 76.471 102 19 2 115 212 268 368 9.78e-17 82.4
MsG0180003549.01.T02 MTR_1g064300 95.918 49 2 0 55 103 150 198 2.06e-16 81.3
MsG0180003549.01.T02 MTR_1g064300 96.825 63 2 0 246 308 573 635 3.39e-33 131
MsG0180003549.01.T02 MTR_1g064300 62.500 80 27 2 296 372 723 802 3.96e-23 101
MsG0180003549.01.T02 MTR_1g064300 53.182 220 40 6 55 212 150 368 1.72e-19 90.9
MsG0180003549.01.T02 MTR_1g442830 96.825 63 2 0 246 308 555 617 3.91e-33 131
MsG0180003549.01.T02 MTR_1g442830 68.657 67 21 0 296 362 705 771 4.91e-23 101
MsG0180003549.01.T02 MTR_1g442830 85.714 49 2 2 55 103 151 194 3.49e-17 84.0
MsG0180003549.01.T02 MTR_1g442830 50.000 178 30 4 115 234 264 440 5.40e-16 80.1
MsG0180003549.01.T02 MTR_1g064300 96.825 63 2 0 246 308 367 429 4.42e-33 130
MsG0180003549.01.T02 MTR_1g064300 62.500 80 27 2 296 372 517 596 6.15e-23 100
MsG0180003549.01.T02 MTR_1g064300 76.471 102 23 1 131 232 82 182 1.19e-16 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003549.01.T01 AT1G69070 60.000 90 36 0 8 97 773 862 4.57e-26 102
MsG0180003549.01.T01 AT1G69070 60.000 90 36 0 8 97 776 865 4.70e-26 102
MsG0180003549.01.T02 AT1G69070 76.562 64 15 0 246 309 511 574 1.93e-25 108
MsG0180003549.01.T02 AT1G69070 76.562 64 15 0 246 309 511 574 2.10e-25 108

Find 156 sgRNAs with CRISPR-Local

Find 484 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTTCATGGCTACTGCTT+CGG 0.243552 1:-64114874 None:intergenic
TGAAGAAACTATGACTAAAA+AGG 0.251696 1:+64117203 MsG0180003549.01.T01:five_prime_UTR
GATGAAGGCCTTGATGATTT+TGG 0.256994 1:+64115098 MsG0180003549.01.T01:five_prime_UTR
TCCTCCAACGACTATCTTCT+TGG 0.257256 1:-64117597 None:intergenic
TGAATGAACTTATTGATAAA+AGG 0.272638 1:+64114431 None:intergenic
TTCAAAGCTTTCATCTTGTT+TGG 0.273827 1:-64116356 None:intergenic
CTTCGTTCATCACTCCTTCT+TGG 0.276258 1:-64116113 None:intergenic
GCAGAAGTTGATAAGGTAAA+AGG 0.285083 1:+64117494 MsG0180003549.01.T01:five_prime_UTR
CGCCATTGTTGGGTTGGGTT+TGG 0.290912 1:-64114781 None:intergenic
CTATGATCTTATAACTGATA+TGG 0.296580 1:+64121473 MsG0180003549.01.T01:intron
GCTTTCATGGCTACTGCTTC+GGG 0.299044 1:-64114873 None:intergenic
TTCGGAGCTTCAATTATATA+AGG 0.299927 1:-64117644 None:intergenic
ATATCACGGCCAGATGTTAT+TGG 0.309858 1:-64118852 None:intergenic
CTTTCAGCTCGCTCACTGTC+TGG 0.314704 1:-64122010 None:intergenic
GAACGTGCCACCCCATTCTT+TGG 0.320914 1:-64114983 None:intergenic
AAAGTTTGAATAAATACTAT+TGG 0.330563 1:-64119828 None:intergenic
TGAATAAATACTATTGGTTC+AGG 0.334462 1:-64119822 None:intergenic
CTCAAGTAGTAATCTCAAAT+TGG 0.335539 1:-64121687 None:intergenic
CAAGAACATGCTTTCAAATC+TGG 0.340841 1:+64122192 MsG0180003549.01.T01:CDS
TTCTTGATGCAGCTATGTTA+AGG 0.341761 1:+64121973 MsG0180003549.01.T01:intron
AGAATACTACTTTGAAAGAT+TGG 0.344423 1:+64117367 MsG0180003549.01.T01:five_prime_UTR
GAACGAGCTCAAGTTATTAT+AGG 0.346502 1:-64121649 None:intergenic
TTTGATGATTTCGCCATTGT+TGG 0.347684 1:-64114792 None:intergenic
TTCAGTAATTTGATTGGAAC+TGG 0.357854 1:-64121833 None:intergenic
CGAGTTTATGATAGAAGAAT+TGG 0.358188 1:+64115069 MsG0180003549.01.T01:five_prime_UTR
TATCATAAACTCGGACGATT+TGG 0.358959 1:-64115059 None:intergenic
AAGCATGTTCTTGCTCTTGA+AGG 0.361044 1:-64122182 None:intergenic
TCCGCTTCTGACCCATTACT+TGG 0.371123 1:-64114951 None:intergenic
AAAATATGCCAAATGCATTA+CGG 0.377053 1:+64121722 MsG0180003549.01.T01:exon
TTAGGATTCAGTAATTTGAT+TGG 0.384079 1:-64121839 None:intergenic
AAAGCAAGAGCTGAGAAGTA+TGG 0.389680 1:+64122144 MsG0180003549.01.T01:CDS
AGGTAAAAGGATTGAATGTT+GGG 0.395632 1:+64117507 MsG0180003549.01.T01:five_prime_UTR
AGTATCACAGGAGTCATAAC+TGG 0.397195 1:-64118801 None:intergenic
AAGGTAAAAGGATTGAATGT+TGG 0.397569 1:+64117506 MsG0180003549.01.T01:five_prime_UTR
AAACAAGATGAAAGCTTTGA+AGG 0.398300 1:+64116358 MsG0180003549.01.T01:five_prime_UTR
GGAAGTGTAAAGGGAGATAA+TGG 0.398968 1:+64117563 MsG0180003549.01.T01:five_prime_UTR
ATTACTGAATCCTAAGTTTG+AGG 0.398976 1:+64121847 MsG0180003549.01.T01:CDS
CAAATCTGGACAACTAGAAA+AGG 0.402594 1:+64122206 MsG0180003549.01.T01:exon
CTTCTTGCTGGTGGGTTCGT+TGG 0.403728 1:-64114826 None:intergenic
GATTCTGTTGGAAGTGTAAA+GGG 0.404106 1:+64117554 MsG0180003549.01.T01:five_prime_UTR
AAATATGCCAAATGCATTAC+GGG 0.405965 1:+64121723 MsG0180003549.01.T01:exon
TCTTGATGCAGCTATGTTAA+GGG 0.406379 1:+64121974 MsG0180003549.01.T01:intron
CTTTGAAGATGAGATGCTTC+GGG 0.407003 1:+64115368 MsG0180003549.01.T01:five_prime_UTR
GATCCCCACATATTATTTGA+AGG 0.409851 1:+64122369 MsG0180003549.01.T01:three_prime_UTR
TTCTTCTTCTTCTTGCTGGT+GGG 0.409879 1:-64114834 None:intergenic
CGCTGTGTCTCTTGCGATTG+TGG 0.416722 1:+64118744 MsG0180003549.01.T01:five_prime_UTR
AGGTGAGGCGTGAAGCTAAA+GGG 0.417578 1:+64122050 MsG0180003549.01.T01:CDS
AGGCATTGATATATCCTTGT+AGG 0.419193 1:-64121629 None:intergenic
TATCACGGCCAGATGTTATT+GGG 0.421115 1:-64118851 None:intergenic
CGTAGGAAGTTCCAAGTAAT+GGG 0.422421 1:+64114940 MsG0180003549.01.T01:five_prime_UTR
GAATAAATGTTAAAACTTGT+GGG 0.424369 1:+64122256 MsG0180003549.01.T01:three_prime_UTR
TGAGAGAAGAGATGAGGAGG+AGG 0.431745 1:+64117244 MsG0180003549.01.T01:five_prime_UTR
AAGAGCTGCAGAAGTTGATA+AGG 0.435279 1:+64117487 MsG0180003549.01.T01:five_prime_UTR
ACTTTGAAGATGAGATGCTT+CGG 0.439081 1:+64115367 MsG0180003549.01.T01:five_prime_UTR
TCTCTCCTTCAAATAATATG+TGG 0.439934 1:-64122374 None:intergenic
ATCTAATCATCAATCGGATT+CGG 0.443526 1:+64117718 MsG0180003549.01.T01:five_prime_UTR
GAAGACGATGATGAATTTGA+AGG 0.445132 1:+64115322 MsG0180003549.01.T01:five_prime_UTR
GCAACCCATTCGAGTCAATC+TGG 0.446156 1:+64114914 MsG0180003549.01.T01:five_prime_UTR
TATATCATGCGAAAATTCTC+AGG 0.447408 1:+64119877 MsG0180003549.01.T01:five_prime_UTR
GATGAAAGCTTTGAAGGCTC+TGG 0.454907 1:+64116364 MsG0180003549.01.T01:five_prime_UTR
GACACTATCTAATCATCAAT+CGG 0.456272 1:+64117712 MsG0180003549.01.T01:five_prime_UTR
GAGATCGCAGCGCGAACGTC+AGG 0.458888 1:+64115133 MsG0180003549.01.T01:five_prime_UTR
ATGATATATGTTACTTTCAG+TGG 0.460028 1:-64119862 None:intergenic
CTCTCCTTCAAATAATATGT+GGG 0.465901 1:-64122373 None:intergenic
TCATCACCAGAGAGAGATCT+TGG 0.466097 1:-64117156 None:intergenic
GGCATTGATATATCCTTGTA+GGG 0.466990 1:-64121628 None:intergenic
ATTTGAAGGAATGATGGTCT+TGG 0.467107 1:+64115336 MsG0180003549.01.T01:five_prime_UTR
CCTTTGAAAATTATGTTCAC+TGG 0.472087 1:+64117669 MsG0180003549.01.T01:five_prime_UTR
TGAATAAATGTTAAAACTTG+TGG 0.472318 1:+64122255 MsG0180003549.01.T01:three_prime_UTR
AGATAAGGACTTCACTTCTC+TGG 0.473153 1:+64116301 MsG0180003549.01.T01:five_prime_UTR
ATTTAACTTCAATAGCTTGA+CGG 0.473288 1:-64114478 None:intergenic
GATTTCGCCATTGTTGGGTT+GGG 0.474429 1:-64114786 None:intergenic
TGATTTCGCCATTGTTGGGT+TGG 0.476958 1:-64114787 None:intergenic
AAGATAGCTTGTCTGCTAAA+CGG 0.481368 1:+64116419 MsG0180003549.01.T01:five_prime_UTR
GAAAGGAGATACCAAAGAAT+GGG 0.482402 1:+64114972 MsG0180003549.01.T01:five_prime_UTR
CTACTTCTTGCTTGATGTGA+AGG 0.483308 1:+64122099 MsG0180003549.01.T01:CDS
GCAAAGAGAAATGATTCTGT+TGG 0.491781 1:+64117542 MsG0180003549.01.T01:five_prime_UTR
TTGATGATTTCGCCATTGTT+GGG 0.494744 1:-64114791 None:intergenic
ACGTAGGAAGTTCCAAGTAA+TGG 0.497658 1:+64114939 MsG0180003549.01.T01:five_prime_UTR
TTGAAAATTATGTTCACTGG+TGG 0.498173 1:+64117672 MsG0180003549.01.T01:five_prime_UTR
TCTTGAGAGAAGAGATGAGG+AGG 0.501654 1:+64117241 MsG0180003549.01.T01:five_prime_UTR
ATGCGTTGCCCAATAACATC+TGG 0.502843 1:+64118843 MsG0180003549.01.T01:five_prime_UTR
GAGGTGAGGCGTGAAGCTAA+AGG 0.509324 1:+64122049 MsG0180003549.01.T01:CDS
TGGTGAAGATTCTGATGATT+CGG 0.509906 1:+64117289 MsG0180003549.01.T01:five_prime_UTR
AGGTCTGAAGATTCTGATGA+AGG 0.511371 1:+64117314 MsG0180003549.01.T01:five_prime_UTR
TGATTCTGTTGGAAGTGTAA+AGG 0.516796 1:+64117553 MsG0180003549.01.T01:five_prime_UTR
CACTTCTCTGGCTCATTCCG+AGG 0.518270 1:+64116313 MsG0180003549.01.T01:five_prime_UTR
AGAGAACCAAGATCTCTCTC+TGG 0.520333 1:+64117150 MsG0180003549.01.T01:five_prime_UTR
TCCTTATCTATCCTTCCAGC+AGG 0.521275 1:-64116287 None:intergenic
AAATCTGGACAACTAGAAAA+GGG 0.526458 1:+64122207 MsG0180003549.01.T01:exon
GCGGCAGAGGGTGGTGGAGA+AGG 0.528431 1:-64114752 None:intergenic
GGACAATGAATAATTCTGTC+AGG 0.530367 1:+64116440 MsG0180003549.01.T01:five_prime_UTR
GATAGTCACTTACAAAGTAA+TGG 0.534292 1:-64122408 None:intergenic
GGAAAGGAGATACCAAAGAA+TGG 0.539697 1:+64114971 MsG0180003549.01.T01:five_prime_UTR
GAAGGAATGATGGTCTTGGA+AGG 0.540671 1:+64115340 MsG0180003549.01.T01:five_prime_UTR
AAGAATTGGTGAAATGATGA+AGG 0.541022 1:+64115083 MsG0180003549.01.T01:five_prime_UTR
GTGACCAGATTGACTCGAAT+GGG 0.542975 1:-64114918 None:intergenic
AGTCAGAGACAACAAGGCCT+CGG 0.545810 1:-64116330 None:intergenic
GATATCAGTGCAGGTTCAGA+AGG 0.548400 1:+64117407 MsG0180003549.01.T01:five_prime_UTR
TCGCACATCAATAGTATCAC+AGG 0.550865 1:-64118813 None:intergenic
AGACACAGCGTCTTTGAAGA+AGG 0.550949 1:-64118731 None:intergenic
TGGATGAACATCATACTTTG+AGG 0.551930 1:+64121783 MsG0180003549.01.T01:CDS
CAATTCTTCTATCATAAACT+CGG 0.553665 1:-64115068 None:intergenic
GCTTTGAAGCTATTTCTGAC+TGG 0.557334 1:+64116065 MsG0180003549.01.T01:intron
TCTGGCCGTGATATTGCCGT+TGG 0.558685 1:+64118861 MsG0180003549.01.T01:five_prime_UTR
TCTCTCTCTGGTGATGACCT+TGG 0.559106 1:+64117162 MsG0180003549.01.T01:five_prime_UTR
GATACCAAGAAGATAGTCGT+TGG 0.560935 1:+64117593 MsG0180003549.01.T01:five_prime_UTR
CTATCACAGAAAGTAGCAGC+TGG 0.562254 1:+64118708 MsG0180003549.01.T01:intron
GGTTAAAGAGACTAGAACAT+CGG 0.563412 1:+64122340 MsG0180003549.01.T01:three_prime_UTR
AAGAAGAAGAACACACAAGA+TGG 0.563887 1:+64114849 MsG0180003549.01.T01:five_prime_UTR
CTTATTGATAAAAGGCTCAA+GGG 0.568156 1:+64114439 MsG0180003549.01.T02:CDS
TGATGAATTTGAAGGAATGA+TGG 0.571406 1:+64115330 MsG0180003549.01.T01:five_prime_UTR
TAGCTTTACCAAAATCATCA+AGG 0.572384 1:-64115106 None:intergenic
CGTGACCAGATTGACTCGAA+TGG 0.575204 1:-64114919 None:intergenic
TCTCTTGCGATTGTGGTCCA+TGG 0.576194 1:+64118751 MsG0180003549.01.T01:five_prime_UTR
GATTCTTGAGAGAAGAGATG+AGG 0.577765 1:+64117238 MsG0180003549.01.T01:five_prime_UTR
GTTCTCTTGCTATTGAGAAG+AGG 0.577774 1:+64115002 MsG0180003549.01.T01:five_prime_UTR
GATGATGATGATATCAGTGC+AGG 0.578213 1:+64117398 MsG0180003549.01.T01:five_prime_UTR
AATAAATGTTAAAACTTGTG+GGG 0.578482 1:+64122257 MsG0180003549.01.T01:three_prime_UTR
ACTTATTGATAAAAGGCTCA+AGG 0.579152 1:+64114438 MsG0180003549.01.T02:CDS
CAAGAGCTGAGAAGTATGGA+AGG 0.580782 1:+64122148 MsG0180003549.01.T01:CDS
ACCTCTGTTGAAACCCTACA+AGG 0.581709 1:+64121615 MsG0180003549.01.T01:five_prime_UTR
AGTTTCTTCATCGACAGAGA+AGG 0.583142 1:-64117190 None:intergenic
TTCACTCGAATCTTCAGCAG+CGG 0.584454 1:-64117095 None:intergenic
ACCTGCTGGAAGGATAGATA+AGG 0.593990 1:+64116286 MsG0180003549.01.T01:five_prime_UTR
AACCAAACCCAACCCAACAA+TGG 0.595228 1:+64114779 MsG0180003549.01.T01:five_prime_UTR
GAAGATGATGATATCAGTGC+TGG 0.602350 1:+64117431 MsG0180003549.01.T01:five_prime_UTR
TCCAAGTAATGGGTCAGAAG+CGG 0.605094 1:+64114950 MsG0180003549.01.T01:five_prime_UTR
AAAGATGAAGACCTGCTGGA+AGG 0.608709 1:+64116276 MsG0180003549.01.T01:five_prime_UTR
TCCTTGTAGGGTTTCAACAG+AGG 0.609177 1:-64121616 None:intergenic
AAGGAATGATGGTCTTGGAA+GGG 0.609967 1:+64115341 MsG0180003549.01.T01:five_prime_UTR
ACCAAGAAGATAGTCGTTGG+AGG 0.610706 1:+64117596 MsG0180003549.01.T01:five_prime_UTR
AAGAACCAACGGCAATATCA+CGG 0.614085 1:-64118866 None:intergenic
ACAGAGACATAAAACCAAGA+AGG 0.615856 1:+64116099 MsG0180003549.01.T01:intron
GGTGAGGCGTGAAGCTAAAG+GGG 0.618945 1:+64122051 MsG0180003549.01.T01:CDS
TGGTTCAGTCAGAGACAACA+AGG 0.620464 1:-64116336 None:intergenic
AGATTCTGATGAAGGATCTG+AGG 0.625208 1:+64117322 MsG0180003549.01.T01:five_prime_UTR
TCTCCTTCAAATAATATGTG+GGG 0.628876 1:-64122372 None:intergenic
GAGAGAAGAGATGAGGAGGA+GGG 0.637619 1:+64117245 MsG0180003549.01.T01:five_prime_UTR
GGATGTCTAAAATCAGAACA+TGG 0.642716 1:-64118780 None:intergenic
AAGATTCTGATGATTCGGAA+AGG 0.644071 1:+64117294 MsG0180003549.01.T01:five_prime_UTR
TCAGAACATGGAAAATACCA+TGG 0.644669 1:-64118768 None:intergenic
TGAGCTGATTAAGTTGAAAG+TGG 0.649315 1:+64121763 MsG0180003549.01.T01:CDS
TGAGGCGACCACTTCAAATG+CGG 0.651913 1:+64121801 MsG0180003549.01.T01:CDS
GTAATGGGTCAGAAGCGGAA+AGG 0.654267 1:+64114955 MsG0180003549.01.T01:five_prime_UTR
TCTTCTAGTGAAGATGATGA+TGG 0.654306 1:+64117269 MsG0180003549.01.T01:five_prime_UTR
AGAACATAAGAAAGAACCAA+CGG 0.656060 1:-64118877 None:intergenic
AAGTTAAATCGCTAAACATG+AGG 0.662943 1:+64114492 MsG0180003549.01.T02:CDS
GAAGATGATGATGAAACTGA+TGG 0.670632 1:+64115390 MsG0180003549.01.T01:five_prime_UTR
CGACAGAGAAGGAATCGCCA+AGG 0.671556 1:-64117179 None:intergenic
TCGAGTCAATCTGGTCACGT+AGG 0.674124 1:+64114923 MsG0180003549.01.T01:five_prime_UTR
TTTGAAGGAGAGAAACACAA+TGG 0.680469 1:+64122384 MsG0180003549.01.T01:three_prime_UTR
AGAAGATGAAGATGATGACG+AGG 0.691743 1:+64117457 MsG0180003549.01.T01:five_prime_UTR
TATGGATGCAGCTAATGTTG+AGG 0.692282 1:+64121491 MsG0180003549.01.T01:intron
AAAGGAGATACCAAAGAATG+GGG 0.697230 1:+64114973 MsG0180003549.01.T01:five_prime_UTR
GGAGATACCAAAGAATGGGG+TGG 0.699556 1:+64114976 MsG0180003549.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAGAAAAAC+TGG - Chr1:64115833-64115852 None:intergenic 10.0%
!! AAAGCAAATAAAAAATTAAT+TGG - Chr1:64114521-64114540 None:intergenic 10.0%
!! TAAACATAATATTAATGATA+TGG + Chr1:64120578-64120597 MsG0180003549.01.T01:intron 10.0%
!!! AAGATTTTAGAATATTAAAT+CGG + Chr1:64120465-64120484 MsG0180003549.01.T01:intron 10.0%
!!! TTAATTTTTTTTAGTATACA+TGG - Chr1:64120218-64120237 None:intergenic 10.0%
!!! TTTACTTTTGAATTTTTTAT+AGG + Chr1:64118947-64118966 MsG0180003549.01.T01:intron 10.0%
!!! TTTATTTCAATTTCTAAAAT+TGG + Chr1:64117970-64117989 MsG0180003549.01.T01:intron 10.0%
!!! TTTTTTTTTGAAGAAATAAT+CGG + Chr1:64120499-64120518 MsG0180003549.01.T01:intron 10.0%
!! AAAGTTTGAATAAATACTAT+TGG - Chr1:64119831-64119850 None:intergenic 15.0%
!! AAATTGGTAAAAATATTTCT+GGG - Chr1:64121674-64121693 None:intergenic 15.0%
!! AAGTTAATTATCAAATTATC+AGG - Chr1:64115519-64115538 None:intergenic 15.0%
!! AATGCAAAAAAAATAAGAAA+TGG - Chr1:64114663-64114682 None:intergenic 15.0%
!! AATTTGAACAAAAAACTTAA+AGG - Chr1:64119023-64119042 None:intergenic 15.0%
!! TAATATAACAGTTAAAACTT+GGG - Chr1:64117914-64117933 None:intergenic 15.0%
!! TATAGATTTACATAAAGAAT+TGG - Chr1:64119608-64119627 None:intergenic 15.0%
!! TTAATATAACAGTTAAAACT+TGG - Chr1:64117915-64117934 None:intergenic 15.0%
!!! AATATCTTATCTGTATTTTA+AGG - Chr1:64120953-64120972 None:intergenic 15.0%
!!! AGATTTTAGAATATTAAATC+GGG + Chr1:64120466-64120485 MsG0180003549.01.T01:intron 15.0%
!!! ATATCTTATCTGTATTTTAA+GGG - Chr1:64120952-64120971 None:intergenic 15.0%
!!! TGATAATTTGATAATTAACT+TGG + Chr1:64115518-64115537 MsG0180003549.01.T01:intron 15.0%
!!! TTCTTTTTGAAATTTTTCAA+AGG - Chr1:64114615-64114634 None:intergenic 15.0%
!!! TTTAAGTTTTTTGTTCAAAT+TGG + Chr1:64119022-64119041 MsG0180003549.01.T01:intron 15.0%
!!! TTTTTTTTGAAGAAATAATC+GGG + Chr1:64120500-64120519 MsG0180003549.01.T01:intron 15.0%
!! AAAACTAAGAAGAAAGAATT+AGG - Chr1:64114705-64114724 None:intergenic 20.0%
!! AAACTAAGAAGAAAGAATTA+GGG - Chr1:64114704-64114723 None:intergenic 20.0%
!! AACACTAACAAAAAGATAAA+AGG - Chr1:64120175-64120194 None:intergenic 20.0%
!! AACCATTAACATGATATATT+AGG - Chr1:64115445-64115464 None:intergenic 20.0%
!! AATAAATGTTAAAACTTGTG+GGG + Chr1:64122257-64122276 MsG0180003549.01.T01:three_prime_UTR 20.0%
!! AATACCTGAAAAGATAAATA+CGG - Chr1:64118402-64118421 None:intergenic 20.0%
!! ACACTAACAAAAAGATAAAA+GGG - Chr1:64120174-64120193 None:intergenic 20.0%
!! ACATTGTGAAAAGTTTAAAA+AGG - Chr1:64116030-64116049 None:intergenic 20.0%
!! AGAAACTAATTACTGAAAAA+GGG + Chr1:64120408-64120427 MsG0180003549.01.T01:intron 20.0%
!! ATCCATAATTTCAGAAAAAA+CGG + Chr1:64117059-64117078 MsG0180003549.01.T01:intron 20.0%
!! ATGATGAATATCAAACTATT+TGG + Chr1:64120550-64120569 MsG0180003549.01.T01:intron 20.0%
!! CAAATTGGTAAAAATATTTC+TGG - Chr1:64121675-64121694 None:intergenic 20.0%
!! CATTAATTCACAAAATTTCA+AGG - Chr1:64115243-64115262 None:intergenic 20.0%
!! CTTAAAAAAAGAAGATATCA+GGG - Chr1:64116496-64116515 None:intergenic 20.0%
!! GAATAAATGTTAAAACTTGT+GGG + Chr1:64122256-64122275 MsG0180003549.01.T01:three_prime_UTR 20.0%
!! GATATATAATATCATGCATA+TGG + Chr1:64121075-64121094 MsG0180003549.01.T01:intron 20.0%
!! GCTATGATAACAAATATAAA+TGG - Chr1:64121454-64121473 None:intergenic 20.0%
!! GGTGATAACATAAAAAAAAA+AGG - Chr1:64119525-64119544 None:intergenic 20.0%
!! GTTATAAACATCTAACTTAA+AGG + Chr1:64119482-64119501 MsG0180003549.01.T01:intron 20.0%
!! GTTTGATGAAAATATGATAA+TGG + Chr1:64119403-64119422 MsG0180003549.01.T01:intron 20.0%
!! TAAAACAAACAGTATAAACA+TGG - Chr1:64115573-64115592 None:intergenic 20.0%
!! TACCTAATATATCATGTTAA+TGG + Chr1:64115440-64115459 MsG0180003549.01.T01:intron 20.0%
!! TCTTAAAAAAAGAAGATATC+AGG - Chr1:64116497-64116516 None:intergenic 20.0%
!! TGAATAAATGTTAAAACTTG+TGG + Chr1:64122255-64122274 MsG0180003549.01.T01:three_prime_UTR 20.0%
!! TGATATAATCTAGTTAATAG+AGG + Chr1:64118128-64118147 MsG0180003549.01.T01:intron 20.0%
!!! AGTTAATTAGGTTGTATATT+TGG - Chr1:64120776-64120795 None:intergenic 20.0%
!!! ATTATGATTTTTCGATTACA+GGG + Chr1:64121578-64121597 MsG0180003549.01.T01:intron 20.0%
!!! CTGTTATATTAACTTTTATG+TGG + Chr1:64117923-64117942 MsG0180003549.01.T01:intron 20.0%
!!! CTTTCTAAGATCTTTTTAAT+TGG + Chr1:64119670-64119689 MsG0180003549.01.T01:intron 20.0%
!!! GTTTAATTTGAAAAAGTTCA+TGG + Chr1:64118181-64118200 MsG0180003549.01.T01:intron 20.0%
!!! TAACATTTTTCTTGCAAAAA+AGG - Chr1:64121332-64121351 None:intergenic 20.0%
!!! TATTATGATTTTTCGATTAC+AGG + Chr1:64121577-64121596 MsG0180003549.01.T01:intron 20.0%
!!! TTAAAGAACTAATTTGTAAC+AGG - Chr1:64119064-64119083 None:intergenic 20.0%
!!! TTATCTTTTCAGGTATTTTA+TGG + Chr1:64118405-64118424 MsG0180003549.01.T01:intron 20.0%
!!! TTGAAATTTTTCAAAGGAAA+AGG - Chr1:64114609-64114628 None:intergenic 20.0%
!!! TTTTTTAGTATACATGGTAT+AGG - Chr1:64120212-64120231 None:intergenic 20.0%
! AAAATATGCCAAATGCATTA+CGG + Chr1:64121722-64121741 MsG0180003549.01.T01:exon 25.0%
! AAGAAAAAAATTGAAGAGAG+AGG + Chr1:64122030-64122049 MsG0180003549.01.T01:CDS 25.0%
! ACAAGTCCTCATAAATATTT+AGG - Chr1:64118340-64118359 None:intergenic 25.0%
! ACTAACAAAAAGATAAAAGG+GGG - Chr1:64120172-64120191 None:intergenic 25.0%
! ACTTTATCAAGAACTTGAAT+TGG + Chr1:64118650-64118669 MsG0180003549.01.T01:intron 25.0%
! AGATTGACTACAAAATATCA+TGG - Chr1:64121358-64121377 None:intergenic 25.0%
! ATAATCTAGTTAATAGAGGT+TGG + Chr1:64118132-64118151 MsG0180003549.01.T01:intron 25.0%
! ATATTAATGATATGGACTTC+TGG + Chr1:64120586-64120605 MsG0180003549.01.T01:intron 25.0%
! ATATTCCAACTTTCTCTTTA+TGG + Chr1:64116523-64116542 MsG0180003549.01.T01:intron 25.0%
! CAAAAAAGGTGGTAATAAAT+TGG - Chr1:64121318-64121337 None:intergenic 25.0%
! CAATTCTTCTATCATAAACT+CGG - Chr1:64115071-64115090 None:intergenic 25.0%
! CACTAACAAAAAGATAAAAG+GGG - Chr1:64120173-64120192 None:intergenic 25.0%
! CATGATATTATATATCATGC+AGG - Chr1:64121071-64121090 None:intergenic 25.0%
! CCATTTGTAACAAAAACTTA+AGG + Chr1:64119451-64119470 MsG0180003549.01.T01:intron 25.0%
! CGTAAGTAATCATGTTAATA+AGG - Chr1:64119183-64119202 None:intergenic 25.0%
! CTATGATCTTATAACTGATA+TGG + Chr1:64121473-64121492 MsG0180003549.01.T01:intron 25.0%
! GAAGAAACTATGACTAAAAA+GGG + Chr1:64117204-64117223 MsG0180003549.01.T01:five_prime_UTR 25.0%
! GAGAAACTAATTACTGAAAA+AGG + Chr1:64120407-64120426 MsG0180003549.01.T01:intron 25.0%
! GATTATTAGCACTAGTATTA+AGG - Chr1:64120084-64120103 None:intergenic 25.0%
! GATTTACATAAAGAATTGGT+AGG - Chr1:64119604-64119623 None:intergenic 25.0%
! TAAAGAGAAAGTTGGAATAT+AGG - Chr1:64116523-64116542 None:intergenic 25.0%
! TCAAGTTCTTGATAAAGTTA+AGG - Chr1:64118648-64118667 None:intergenic 25.0%
! TCATGGATCATTTAACATTA+AGG + Chr1:64119138-64119157 MsG0180003549.01.T01:intron 25.0%
! TCTGTTCCTAAATATTTATG+AGG + Chr1:64118331-64118350 MsG0180003549.01.T01:intron 25.0%
! TGAAGAAACTATGACTAAAA+AGG + Chr1:64117203-64117222 MsG0180003549.01.T01:five_prime_UTR 25.0%
! TGATAACAAATATAAATGGC+AGG - Chr1:64121450-64121469 None:intergenic 25.0%
! TGTAATGAAACACAATTTGT+TGG - Chr1:64120805-64120824 None:intergenic 25.0%
! TGTATAAACGTCTAACTTAA+AGG - Chr1:64118994-64119013 None:intergenic 25.0%
! TTAGGATTCAGTAATTTGAT+TGG - Chr1:64121842-64121861 None:intergenic 25.0%
! TTTCAAACAACATTAAAGGT+AGG - Chr1:64120906-64120925 None:intergenic 25.0%
! TTTGAACTCTAATTAGCTAT+TGG + Chr1:64115490-64115509 MsG0180003549.01.T01:intron 25.0%
! TTTGCAGATATTTCAGATTT+GGG + Chr1:64115678-64115697 MsG0180003549.01.T01:intron 25.0%
!! ACATAATTTTCAAAGGTCTT+CGG - Chr1:64117665-64117684 None:intergenic 25.0%
!! AGAATACTACTTTGAAAGAT+TGG + Chr1:64117367-64117386 MsG0180003549.01.T01:five_prime_UTR 25.0%
!! ATAACCGTATTTATCTTTTC+AGG + Chr1:64118395-64118414 MsG0180003549.01.T01:intron 25.0%
!! ATTTAACTTCAATAGCTTGA+CGG - Chr1:64114481-64114500 None:intergenic 25.0%
!! CATTTTCTTGTATATTCTAC+TGG + Chr1:64120144-64120163 MsG0180003549.01.T01:intron 25.0%
!! CCTTAAGTTTTTGTTACAAA+TGG - Chr1:64119454-64119473 None:intergenic 25.0%
!! GTAATGAAACACAATTTGTT+GGG - Chr1:64120804-64120823 None:intergenic 25.0%
!! TAACAAAGTTGGTTGAAAAT+GGG - Chr1:64119110-64119129 None:intergenic 25.0%
!! TTAACAAAGTTGGTTGAAAA+TGG - Chr1:64119111-64119130 None:intergenic 25.0%
!! TTAATGGTTTATTTGCTGAT+TGG + Chr1:64115456-64115475 MsG0180003549.01.T01:intron 25.0%
!! TTTTGCAGATATTTCAGATT+TGG + Chr1:64115677-64115696 MsG0180003549.01.T01:intron 25.0%
!!! AAATAATCGGGTTAGTTTTT+TGG + Chr1:64120512-64120531 MsG0180003549.01.T01:intron 25.0%
!!! AAGAAATGGTTTTTTTGTGT+TGG - Chr1:64114649-64114668 None:intergenic 25.0%
!!! AATAGACTAATTTGCTTAGT+TGG + Chr1:64118286-64118305 MsG0180003549.01.T01:intron 25.0%
!!! ACTGTTTTTCATACAATGAA+AGG - Chr1:64120879-64120898 None:intergenic 25.0%
!!! AGAAATGGTTTTTTTGTGTT+GGG - Chr1:64114648-64114667 None:intergenic 25.0%
!!! AGAGTTTTTTGTGAACTTAA+AGG - Chr1:64120995-64121014 None:intergenic 25.0%
!!! ATGATATATGTTACTTTCAG+TGG - Chr1:64119865-64119884 None:intergenic 25.0%
!!! CACTTCATCCTTTTTTTTTA+CGG - Chr1:64120839-64120858 None:intergenic 25.0%
!!! CGTTTTTTGAATACTAATGT+TGG + Chr1:64122319-64122338 MsG0180003549.01.T01:three_prime_UTR 25.0%
!!! GAAATGTTTTTCAAATACTG+TGG + Chr1:64121538-64121557 MsG0180003549.01.T01:intron 25.0%
!!! TAATGAAACACAATTTGTTG+GGG - Chr1:64120803-64120822 None:intergenic 25.0%
!!! TGAATAAATACTATTGGTTC+AGG - Chr1:64119825-64119844 None:intergenic 25.0%
AAAATTTCCATTAGAGACGT+AGG - Chr1:64120381-64120400 None:intergenic 30.0%
AAACTATGACTAAAAAGGGT+GGG + Chr1:64117208-64117227 MsG0180003549.01.T01:five_prime_UTR 30.0%
AAATATGCCAAATGCATTAC+GGG + Chr1:64121723-64121742 MsG0180003549.01.T01:exon 30.0%
AAATCTGGACAACTAGAAAA+GGG + Chr1:64122207-64122226 MsG0180003549.01.T01:exon 30.0%
AAGAATTGGTGAAATGATGA+AGG + Chr1:64115083-64115102 MsG0180003549.01.T01:five_prime_UTR 30.0%
AAGGTAAAAGGATTGAATGT+TGG + Chr1:64117506-64117525 MsG0180003549.01.T01:five_prime_UTR 30.0%
AAGTTAAATCGCTAAACATG+AGG + Chr1:64114492-64114511 MsG0180003549.01.T02:CDS 30.0%
ACACAATGAATATAAAACGC+AGG + Chr1:64119773-64119792 MsG0180003549.01.T01:intron 30.0%
ACTTATTGATAAAAGGCTCA+AGG + Chr1:64114438-64114457 MsG0180003549.01.T02:CDS 30.0%
ACTTTGTTAAATAGTGCTCA+TGG + Chr1:64119121-64119140 MsG0180003549.01.T01:intron 30.0%
AGAACATAAGAAAGAACCAA+CGG - Chr1:64118880-64118899 None:intergenic 30.0%
AGCACTAGTATTAAGGAATT+TGG - Chr1:64120077-64120096 None:intergenic 30.0%
AGGTAAAAGGATTGAATGTT+GGG + Chr1:64117507-64117526 MsG0180003549.01.T01:five_prime_UTR 30.0%
AGTGATGTCCGTAAAAAAAA+AGG + Chr1:64120828-64120847 MsG0180003549.01.T01:intron 30.0%
ATAATCTTTGTCGAACAAAC+TGG + Chr1:64120098-64120117 MsG0180003549.01.T01:intron 30.0%
ATCAGATCCTTATTGATGAA+TGG - Chr1:64119546-64119565 None:intergenic 30.0%
ATCTAATCATCAATCGGATT+CGG + Chr1:64117718-64117737 MsG0180003549.01.T01:five_prime_UTR 30.0%
ATTACTGAATCCTAAGTTTG+AGG + Chr1:64121847-64121866 MsG0180003549.01.T01:CDS 30.0%
ATTATCCAACCATAACATTC+TGG - Chr1:64121121-64121140 None:intergenic 30.0%
ATTTCTGTTTCAGTGACTAT+AGG + Chr1:64115983-64116002 MsG0180003549.01.T01:intron 30.0%
CAAGAATATTAAGTGAGATC+TGG - Chr1:64114564-64114583 None:intergenic 30.0%
CACATTACCAAATTGAAACA+TGG - Chr1:64121894-64121913 None:intergenic 30.0%
CACGTTTCAAACAACATTAA+AGG - Chr1:64120910-64120929 None:intergenic 30.0%
CCAAATTGAAACATGGAAAA+CGG - Chr1:64121887-64121906 None:intergenic 30.0%
CGAGTTTATGATAGAAGAAT+TGG + Chr1:64115069-64115088 MsG0180003549.01.T01:five_prime_UTR 30.0%
CTCAAGTAGTAATCTCAAAT+TGG - Chr1:64121690-64121709 None:intergenic 30.0%
CTCTCCTTCAAATAATATGT+GGG - Chr1:64122376-64122395 None:intergenic 30.0%
CTTATTGATAAAAGGCTCAA+GGG + Chr1:64114439-64114458 MsG0180003549.01.T02:CDS 30.0%
GACACTATCTAATCATCAAT+CGG + Chr1:64117712-64117731 MsG0180003549.01.T01:five_prime_UTR 30.0%
GATAGTCACTTACAAAGTAA+TGG - Chr1:64122411-64122430 None:intergenic 30.0%
GTAACAGGAAAAAAACTTAC+AGG - Chr1:64119049-64119068 None:intergenic 30.0%
GTGCGATATTTCTTAAATCA+GGG + Chr1:64116164-64116183 MsG0180003549.01.T01:intron 30.0%
GTGGACATTTAATCTTAAGT+TGG - Chr1:64119364-64119383 None:intergenic 30.0%
GTTATCACCATTCATCAATA+AGG + Chr1:64119536-64119555 MsG0180003549.01.T01:intron 30.0%
GTTCCATAAGATGATATAAC+TGG - Chr1:64121169-64121188 None:intergenic 30.0%
TAAACGTCTAACTTAAAGGA+CGG - Chr1:64118990-64119009 None:intergenic 30.0%
TAAATACAAACATATGCGCA+TGG - Chr1:64119966-64119985 None:intergenic 30.0%
TAATATTAAGTGCGAGAACT+TGG - Chr1:64120742-64120761 None:intergenic 30.0%
TATATCATGCGAAAATTCTC+AGG + Chr1:64119877-64119896 MsG0180003549.01.T01:five_prime_UTR 30.0%
TATATTCCCTTTACAATTGC+TGG + Chr1:64118002-64118021 MsG0180003549.01.T01:intron 30.0%
TCTCCTTCAAATAATATGTG+GGG - Chr1:64122375-64122394 None:intergenic 30.0%
TCTCTCCTTCAAATAATATG+TGG - Chr1:64122377-64122396 None:intergenic 30.0%
TCTTTCACTCTAATATTTCC+AGG + Chr1:64116230-64116249 MsG0180003549.01.T01:intron 30.0%
TGAGCACTATTTAACAAAGT+TGG - Chr1:64119121-64119140 None:intergenic 30.0%
TGATGAATTTGAAGGAATGA+TGG + Chr1:64115330-64115349 MsG0180003549.01.T01:five_prime_UTR 30.0%
TGTGCGATATTTCTTAAATC+AGG + Chr1:64116163-64116182 MsG0180003549.01.T01:intron 30.0%
TGTTGGGGTAAAAGTTAATT+AGG - Chr1:64120788-64120807 None:intergenic 30.0%
TTACGGGATAAAAAAAGATG+TGG + Chr1:64121739-64121758 MsG0180003549.01.T01:CDS 30.0%
TTATATTCATTGTGTGAGCA+AGG - Chr1:64119768-64119787 None:intergenic 30.0%
TTCAAAGCTTTCATCTTGTT+TGG - Chr1:64116359-64116378 None:intergenic 30.0%
TTCAGTAATTTGATTGGAAC+TGG - Chr1:64121836-64121855 None:intergenic 30.0%
TTCGGAGCTTCAATTATATA+AGG - Chr1:64117647-64117666 None:intergenic 30.0%
TTGAAAATTATGTTCACTGG+TGG + Chr1:64117672-64117691 MsG0180003549.01.T01:five_prime_UTR 30.0%
TTGAACAAAGAAAATAGCAG+CGG + Chr1:64121390-64121409 MsG0180003549.01.T01:intron 30.0%
TTGATGTGAAGGAAAAAGAA+AGG + Chr1:64122110-64122129 MsG0180003549.01.T01:CDS 30.0%
TTTCTGTTTCAGTGACTATA+GGG + Chr1:64115984-64116003 MsG0180003549.01.T01:intron 30.0%
! AAACAAGATGAAAGCTTTGA+AGG + Chr1:64116358-64116377 MsG0180003549.01.T01:five_prime_UTR 30.0%
! CAATTTCTACAAGTCTTGTA+GGG - Chr1:64118080-64118099 None:intergenic 30.0%
! CATTTTTCTTGCAAAAAAGG+TGG - Chr1:64121329-64121348 None:intergenic 30.0%
! CCAGTGAACATAATTTTCAA+AGG - Chr1:64117672-64117691 None:intergenic 30.0%
! CCTTTGAAAATTATGTTCAC+TGG + Chr1:64117669-64117688 MsG0180003549.01.T01:five_prime_UTR 30.0%
! CTCTAATGGAAATTTTGCTA+AGG + Chr1:64120385-64120404 MsG0180003549.01.T01:intron 30.0%
! GAAAAAGAAAATGCTGCTTA+CGG + Chr1:64120250-64120269 MsG0180003549.01.T01:intron 30.0%
! TAAATCTGAGTATTGCAAAC+TGG - Chr1:64118267-64118286 None:intergenic 30.0%
! TAGCTTTACCAAAATCATCA+AGG - Chr1:64115109-64115128 None:intergenic 30.0%
! TCAATTTCTACAAGTCTTGT+AGG - Chr1:64118081-64118100 None:intergenic 30.0%
! TGCAAAAAGCAAGTTTTACA+AGG + Chr1:64116140-64116159 MsG0180003549.01.T01:five_prime_UTR 30.0%
! TTTATTTGCTGATTGGAACT+TGG + Chr1:64115463-64115482 MsG0180003549.01.T01:intron 30.0%
! TTTTCAGAAACAGTTGTCAA+TGG - Chr1:64115187-64115206 None:intergenic 30.0%
! TTTTTATCCCGTAATGCATT+TGG - Chr1:64121733-64121752 None:intergenic 30.0%
!! ACTTACTTTTCCTCAAACTT+AGG - Chr1:64121860-64121879 None:intergenic 30.0%
!! AGTTGATTCAACTTTTCTTG+TGG + Chr1:64120678-64120697 MsG0180003549.01.T01:intron 30.0%
!! TTTTTGAGCTTTTGCTTTCA+TGG - Chr1:64114889-64114908 None:intergenic 30.0%
!!! ATGGTTTAGATGACTTGTTT+TGG + Chr1:64116806-64116825 MsG0180003549.01.T01:intron 30.0%
!!! ATTGCAGTATTTTGCTGTTT+TGG + Chr1:64118434-64118453 MsG0180003549.01.T01:five_prime_UTR 30.0%
!!! GAAATGGTTTTTTTGTGTTG+GGG - Chr1:64114647-64114666 None:intergenic 30.0%
!!! TGCCGTTTTTTCTGAAATTA+TGG - Chr1:64117064-64117083 None:intergenic 30.0%
AAAAATTGAAGAGAGAGGTG+AGG + Chr1:64122035-64122054 MsG0180003549.01.T01:CDS 35.0%
AAAACTACCTAGCTTAATGC+AGG + Chr1:64116856-64116875 MsG0180003549.01.T01:intron 35.0%
AAACATGAATACAAGCACCA+AGG - Chr1:64117838-64117857 None:intergenic 35.0%
AAACGTCTAACTTAAAGGAC+GGG - Chr1:64118989-64119008 None:intergenic 35.0%
AAACTGTCAGTAGTGAAGAA+TGG - Chr1:64121287-64121306 None:intergenic 35.0%
AAAGGAGATACCAAAGAATG+GGG + Chr1:64114973-64114992 MsG0180003549.01.T01:five_prime_UTR 35.0%
AACAGTAATCAGTCTCCTAT+AGG - Chr1:64118042-64118061 None:intergenic 35.0%
AAGAAGAAGAACACACAAGA+TGG + Chr1:64114849-64114868 MsG0180003549.01.T01:five_prime_UTR 35.0%
AATTCATCGCTCTCAAAACA+AGG - Chr1:64119333-64119352 None:intergenic 35.0%
ACAAAAGAATGCAAACACAC+AGG - Chr1:64118236-64118255 None:intergenic 35.0%
ACAGAGACATAAAACCAAGA+AGG + Chr1:64116099-64116118 MsG0180003549.01.T01:intron 35.0%
ACAGTAATCAGTCTCCTATA+GGG - Chr1:64118041-64118060 None:intergenic 35.0%
ACCATTGATAGAGATGAGTA+CGG + Chr1:64118503-64118522 MsG0180003549.01.T01:five_prime_UTR 35.0%
ACGGAAGCAATAATGAGAAA+AGG + Chr1:64120269-64120288 MsG0180003549.01.T01:intron 35.0%
ACGTCACAAAATAACACAAC+AGG - Chr1:64115638-64115657 None:intergenic 35.0%
AGAACCTCGAGGATAAATAA+TGG - Chr1:64116468-64116487 None:intergenic 35.0%
ATGCCATCAACGAAAAACAT+AGG - Chr1:64119738-64119757 None:intergenic 35.0%
ATTACTGAAAAAGGGATCAG+AGG + Chr1:64120416-64120435 MsG0180003549.01.T01:intron 35.0%
ATTCAGCAAGCAAATCAAAG+AGG - Chr1:64120321-64120340 None:intergenic 35.0%
ATTCATCGCTCTCAAAACAA+GGG - Chr1:64119332-64119351 None:intergenic 35.0%
ATTGAAACATGGAAAACGGA+AGG - Chr1:64121883-64121902 None:intergenic 35.0%
ATTTGAAGGAATGATGGTCT+TGG + Chr1:64115336-64115355 MsG0180003549.01.T01:five_prime_UTR 35.0%
CAAATCTGGACAACTAGAAA+AGG + Chr1:64122206-64122225 MsG0180003549.01.T01:exon 35.0%
CAACGAAAAACATAGGTCAA+AGG - Chr1:64119731-64119750 None:intergenic 35.0%
CAAGAACATGCTTTCAAATC+TGG + Chr1:64122192-64122211 MsG0180003549.01.T01:CDS 35.0%
CACATATTGCAGCAAAGTAT+GGG - Chr1:64118533-64118552 None:intergenic 35.0%
CTACTAATGAATTTAGCCTC+TGG + Chr1:64119641-64119660 MsG0180003549.01.T01:intron 35.0%
CTCAGATATACAACCAAGAT+TGG - Chr1:64116774-64116793 None:intergenic 35.0%
CTCTTCTTATGCCAATTTGA+GGG - Chr1:64115876-64115895 None:intergenic 35.0%
CTGCCAGTTATATCATCTTA+TGG + Chr1:64121163-64121182 MsG0180003549.01.T01:intron 35.0%
GAAACTATGACTAAAAAGGG+TGG + Chr1:64117207-64117226 MsG0180003549.01.T01:five_prime_UTR 35.0%
GAAAGGAGATACCAAAGAAT+GGG + Chr1:64114972-64114991 MsG0180003549.01.T01:five_prime_UTR 35.0%
GAACGAGCTCAAGTTATTAT+AGG - Chr1:64121652-64121671 None:intergenic 35.0%
GAAGACGATGATGAATTTGA+AGG + Chr1:64115322-64115341 MsG0180003549.01.T01:five_prime_UTR 35.0%
GATCCCCACATATTATTTGA+AGG + Chr1:64122369-64122388 MsG0180003549.01.T01:three_prime_UTR 35.0%
GATTAACTGATCTCCAATCT+TGG + Chr1:64116758-64116777 MsG0180003549.01.T01:intron 35.0%
GCAAAGAGAAATGATTCTGT+TGG + Chr1:64117542-64117561 MsG0180003549.01.T01:five_prime_UTR 35.0%
GGACAATGAATAATTCTGTC+AGG + Chr1:64116440-64116459 MsG0180003549.01.T01:five_prime_UTR 35.0%
GGCTGAAAAAGCAAAAGAAA+AGG + Chr1:64116251-64116270 MsG0180003549.01.T01:intron 35.0%
GGTTAAAGAGACTAGAACAT+CGG + Chr1:64122340-64122359 MsG0180003549.01.T01:three_prime_UTR 35.0%
GTCACTGAAACAGAAATAAC+TGG - Chr1:64115980-64115999 None:intergenic 35.0%
GTGCTACAATTATTCCCTAT+AGG + Chr1:64118024-64118043 MsG0180003549.01.T01:intron 35.0%
GTTGTCATTGATGTATTGCA+TGG + Chr1:64118159-64118178 MsG0180003549.01.T01:intron 35.0%
TATCATAAACTCGGACGATT+TGG - Chr1:64115062-64115081 None:intergenic 35.0%
TCAGAACATGGAAAATACCA+TGG - Chr1:64118771-64118790 None:intergenic 35.0%
TCATCCCTGTTTATACACTT+TGG - Chr1:64116832-64116851 None:intergenic 35.0%
TCATCTCATCCAACTAAGTT+TGG - Chr1:64120036-64120055 None:intergenic 35.0%
TCTCTTCTTATGCCAATTTG+AGG - Chr1:64115877-64115896 None:intergenic 35.0%
TCTTCTAGTGAAGATGATGA+TGG + Chr1:64117269-64117288 MsG0180003549.01.T01:five_prime_UTR 35.0%
TCTTCTTATGCCAATTTGAG+GGG - Chr1:64115875-64115894 None:intergenic 35.0%
TCTTGATGCAGCTATGTTAA+GGG + Chr1:64121974-64121993 MsG0180003549.01.T01:intron 35.0%
TGAACAAAGAAAATAGCAGC+GGG + Chr1:64121391-64121410 MsG0180003549.01.T01:intron 35.0%
TGATAAAGTTAAGGCAGAGA+CGG - Chr1:64118639-64118658 None:intergenic 35.0%
TGGATGAACATCATACTTTG+AGG + Chr1:64121783-64121802 MsG0180003549.01.T01:CDS 35.0%
TGGTGAAGATTCTGATGATT+CGG + Chr1:64117289-64117308 MsG0180003549.01.T01:five_prime_UTR 35.0%
TTCTTGATGCAGCTATGTTA+AGG + Chr1:64121973-64121992 MsG0180003549.01.T01:intron 35.0%
TTGGCCAAAGTGTATAAACA+GGG + Chr1:64116825-64116844 MsG0180003549.01.T01:intron 35.0%
TTTGAAGGAGAGAAACACAA+TGG + Chr1:64122384-64122403 MsG0180003549.01.T01:three_prime_UTR 35.0%
TTTGGCCAAAGTGTATAAAC+AGG + Chr1:64116824-64116843 MsG0180003549.01.T01:intron 35.0%
! AAAAGGTGCATTGTCTTATG+TGG + Chr1:64120286-64120305 MsG0180003549.01.T01:intron 35.0%
! AAAGGTGCATTGTCTTATGT+GGG + Chr1:64120287-64120306 MsG0180003549.01.T01:intron 35.0%
! AAGATAGCTTGTCTGCTAAA+CGG + Chr1:64116419-64116438 MsG0180003549.01.T01:five_prime_UTR 35.0%
! AAGATTCTGATGATTCGGAA+AGG + Chr1:64117294-64117313 MsG0180003549.01.T01:five_prime_UTR 35.0%
! ACTTTGAAGATGAGATGCTT+CGG + Chr1:64115367-64115386 MsG0180003549.01.T01:five_prime_UTR 35.0%
! CCGTTTTCCATGTTTCAATT+TGG + Chr1:64121884-64121903 MsG0180003549.01.T01:intron 35.0%
! GAAGATGATGATGAAACTGA+TGG + Chr1:64115390-64115409 MsG0180003549.01.T01:five_prime_UTR 35.0%
! GATTCTGTTGGAAGTGTAAA+GGG + Chr1:64117554-64117573 MsG0180003549.01.T01:five_prime_UTR 35.0%
! GCAGCATTTTCTTTTTCTAC+TGG - Chr1:64120247-64120266 None:intergenic 35.0%
! GCATTAAGCTAGGTAGTTTT+GGG - Chr1:64116856-64116875 None:intergenic 35.0%
! GGATGTCTAAAATCAGAACA+TGG - Chr1:64118783-64118802 None:intergenic 35.0%
! TGACCTATGTTTTTCGTTGA+TGG + Chr1:64119732-64119751 MsG0180003549.01.T01:intron 35.0%
! TGAGTATTGCAAACTGGATT+GGG - Chr1:64118261-64118280 None:intergenic 35.0%
! TGATTCTGTTGGAAGTGTAA+AGG + Chr1:64117553-64117572 MsG0180003549.01.T01:five_prime_UTR 35.0%
! TGCATTAAGCTAGGTAGTTT+TGG - Chr1:64116857-64116876 None:intergenic 35.0%
! TGTTGAGAGTATAAAAACGC+AGG + Chr1:64118587-64118606 MsG0180003549.01.T01:five_prime_UTR 35.0%
! TTGATGATTTCGCCATTGTT+GGG - Chr1:64114794-64114813 None:intergenic 35.0%
! TTGGTAGGATGCACTTTTAA+TGG - Chr1:64119589-64119608 None:intergenic 35.0%
! TTTGATGATTTCGCCATTGT+TGG - Chr1:64114795-64114814 None:intergenic 35.0%
!! ACAAGTTGGTCATATTCATC+TGG - Chr1:64116557-64116576 None:intergenic 35.0%
!! AGATCTTGGTTCTCTTTTGA+TGG - Chr1:64117145-64117164 None:intergenic 35.0%
!! AGGCATTGATATATCCTTGT+AGG - Chr1:64121632-64121651 None:intergenic 35.0%
!! CACATGCACACTTTTTAACT+GGG + Chr1:64119381-64119400 MsG0180003549.01.T01:intron 35.0%
!! GCAGAAGTTGATAAGGTAAA+AGG + Chr1:64117494-64117513 MsG0180003549.01.T01:five_prime_UTR 35.0%
!! GGCATTGATATATCCTTGTA+GGG - Chr1:64121631-64121650 None:intergenic 35.0%
!! TAGATTACAGAAAGCACTCA+TGG - Chr1:64115810-64115829 None:intergenic 35.0%
!! TGAGCTGATTAAGTTGAAAG+TGG + Chr1:64121763-64121782 MsG0180003549.01.T01:CDS 35.0%
!! TTTTGTTTCCGCATTTGAAG+TGG - Chr1:64121812-64121831 None:intergenic 35.0%
!!! ATCTGAGCTTCGTTTTAAGA+TGG + Chr1:64116787-64116806 MsG0180003549.01.T01:intron 35.0%
!!! TCGGGTTAGTTTTTTGGAAT+TGG + Chr1:64120518-64120537 MsG0180003549.01.T01:intron 35.0%
!!! TCTTGGTTTTATGTCTCTGT+AGG - Chr1:64116099-64116118 None:intergenic 35.0%
!!! TGTTTTGAGAGCGATGAATT+TGG + Chr1:64119333-64119352 MsG0180003549.01.T01:intron 35.0%
!!! TGTTTTGATCCATATCTCCT+TGG + Chr1:64117818-64117837 MsG0180003549.01.T01:intron 35.0%
!!! TTTCTTTTGCTTTTTCAGCC+TGG - Chr1:64116251-64116270 None:intergenic 35.0%
AAAGCAAGAGCTGAGAAGTA+TGG + Chr1:64122144-64122163 MsG0180003549.01.T01:CDS 40.0%
AACTGGTAGATTAACCCACT+TGG - Chr1:64115963-64115982 None:intergenic 40.0%
AAGAACCAACGGCAATATCA+CGG - Chr1:64118869-64118888 None:intergenic 40.0%
AAGCATGTTCTTGCTCTTGA+AGG - Chr1:64122185-64122204 None:intergenic 40.0%
AATTTACTCCCATGTGCATC+GGG - Chr1:64116997-64117016 None:intergenic 40.0%
ACGTAGGAAGTTCCAAGTAA+TGG + Chr1:64114939-64114958 MsG0180003549.01.T01:five_prime_UTR 40.0%
ACTGGTAGATTAACCCACTT+GGG - Chr1:64115962-64115981 None:intergenic 40.0%
AGATAAGGACTTCACTTCTC+TGG + Chr1:64116301-64116320 MsG0180003549.01.T01:five_prime_UTR 40.0%
AGATTCTGATGAAGGATCTG+AGG + Chr1:64117322-64117341 MsG0180003549.01.T01:five_prime_UTR 40.0%
AGCAACAATCTTGCAAGTGA+CGG - Chr1:64116937-64116956 None:intergenic 40.0%
AGGTCTGAAGATTCTGATGA+AGG + Chr1:64117314-64117333 MsG0180003549.01.T01:five_prime_UTR 40.0%
AGTATCACAGGAGTCATAAC+TGG - Chr1:64118804-64118823 None:intergenic 40.0%
AGTTTCTTCATCGACAGAGA+AGG - Chr1:64117193-64117212 None:intergenic 40.0%
ATACAAGCACCAAGGAGATA+TGG - Chr1:64117830-64117849 None:intergenic 40.0%
ATATCACGGCCAGATGTTAT+TGG - Chr1:64118855-64118874 None:intergenic 40.0%
ATCCCAATTGTCTGACAAGT+TGG - Chr1:64116571-64116590 None:intergenic 40.0%
ATGATGGCACCAGAATGTTA+TGG + Chr1:64121109-64121128 MsG0180003549.01.T01:intron 40.0%
ATGCACATGGGAGTAAATTG+TGG + Chr1:64116998-64117017 MsG0180003549.01.T01:intron 40.0%
CAATTTACTCCCATGTGCAT+CGG - Chr1:64116998-64117017 None:intergenic 40.0%
CACTTCTCGTGTAAAACAGT+TGG - Chr1:64117871-64117890 None:intergenic 40.0%
CAGATATTTCAGATTTGGGC+CGG + Chr1:64115682-64115701 MsG0180003549.01.T01:intron 40.0%
CATCAATCCTGCATTAAGCT+AGG - Chr1:64116866-64116885 None:intergenic 40.0%
CGTAGGAAGTTCCAAGTAAT+GGG + Chr1:64114940-64114959 MsG0180003549.01.T01:five_prime_UTR 40.0%
CTAAACTAACCCCCTCAAAT+TGG + Chr1:64115862-64115881 MsG0180003549.01.T01:intron 40.0%
CTACTTCTTGCTTGATGTGA+AGG + Chr1:64122099-64122118 MsG0180003549.01.T01:CDS 40.0%
CTCTCAAAACAAGGGTTCAT+AGG - Chr1:64119324-64119343 None:intergenic 40.0%
CTGGCAGAAAACAAGCAATA+TGG - Chr1:64121150-64121169 None:intergenic 40.0%
CTTCTTATGCCAATTTGAGG+GGG - Chr1:64115874-64115893 None:intergenic 40.0%
GAACAAAGAAAATAGCAGCG+GGG + Chr1:64121392-64121411 MsG0180003549.01.T01:intron 40.0%
GAAGATGATGATATCAGTGC+TGG + Chr1:64117431-64117450 MsG0180003549.01.T01:five_prime_UTR 40.0%
GACCAACTTGTCAGACAATT+GGG + Chr1:64116566-64116585 MsG0180003549.01.T01:five_prime_UTR 40.0%
GATACCAAGAAGATAGTCGT+TGG + Chr1:64117593-64117612 MsG0180003549.01.T01:five_prime_UTR 40.0%
GATTCTTGAGAGAAGAGATG+AGG + Chr1:64117238-64117257 MsG0180003549.01.T01:five_prime_UTR 40.0%
GCACATATTGCAGCAAAGTA+TGG - Chr1:64118534-64118553 None:intergenic 40.0%
GGAAAGGAGATACCAAAGAA+TGG + Chr1:64114971-64114990 MsG0180003549.01.T01:five_prime_UTR 40.0%
GGTACCATTATTTATCCTCG+AGG + Chr1:64116461-64116480 MsG0180003549.01.T01:intron 40.0%
GTAGCACCAGCAATTGTAAA+GGG - Chr1:64118011-64118030 None:intergenic 40.0%
GTTCTTCTTCTTCTTCTTGC+TGG - Chr1:64114841-64114860 None:intergenic 40.0%
TAAAGGCTGCAGATGGTATT+TGG + Chr1:64119499-64119518 MsG0180003549.01.T01:intron 40.0%
TAGCGTCTTCCAAACTTAGT+TGG + Chr1:64120024-64120043 MsG0180003549.01.T01:intron 40.0%
TATAGTGTACTAGTGAGCCT+CGG + Chr1:64116906-64116925 MsG0180003549.01.T01:intron 40.0%
TATCACGGCCAGATGTTATT+GGG - Chr1:64118854-64118873 None:intergenic 40.0%
TATCATGCAGGAACTAGCTA+AGG - Chr1:64121059-64121078 None:intergenic 40.0%
TATGGATGCAGCTAATGTTG+AGG + Chr1:64121491-64121510 MsG0180003549.01.T01:intron 40.0%
TCCAACTTTCTCTTTATGGC+AGG + Chr1:64116527-64116546 MsG0180003549.01.T01:intron 40.0%
TCCGTACTCATCTCTATCAA+TGG - Chr1:64118507-64118526 None:intergenic 40.0%
TCCTCATTAATGCGCAATAG+TGG - Chr1:64121206-64121225 None:intergenic 40.0%
TCCTGCCATAAAGAGAAAGT+TGG - Chr1:64116531-64116550 None:intergenic 40.0%
TCGCACATCAATAGTATCAC+AGG - Chr1:64118816-64118835 None:intergenic 40.0%
TCTAACTTAAAGGCTGCAGA+TGG + Chr1:64119492-64119511 MsG0180003549.01.T01:intron 40.0%
TCTTCACTACTGACAGTTTC+AGG + Chr1:64121288-64121307 MsG0180003549.01.T01:five_prime_UTR 40.0%
TCTTCGCTTTCTTGTGTTTG+AGG + Chr1:64121012-64121031 MsG0180003549.01.T01:intron 40.0%
TGACCAACTTGTCAGACAAT+TGG + Chr1:64116565-64116584 MsG0180003549.01.T01:five_prime_UTR 40.0%
TGCTTAACCTACGTCTCTAA+TGG + Chr1:64120371-64120390 MsG0180003549.01.T01:intron 40.0%
TGTAGCACCAGCAATTGTAA+AGG - Chr1:64118012-64118031 None:intergenic 40.0%
TTAGCCAGTCAGATCAGAAA+GGG + Chr1:64121917-64121936 MsG0180003549.01.T01:intron 40.0%
TTCCCTAAAGTCACAGTAAC+AGG - Chr1:64115777-64115796 None:intergenic 40.0%
TTCTCGTGTAAAACAGTTGG+TGG - Chr1:64117868-64117887 None:intergenic 40.0%
TTCTTCTTCTTCTTGCTGGT+GGG - Chr1:64114837-64114856 None:intergenic 40.0%
! AAGGAATGATGGTCTTGGAA+GGG + Chr1:64115341-64115360 MsG0180003549.01.T01:five_prime_UTR 40.0%
! AGAAGATGAAGATGATGACG+AGG + Chr1:64117457-64117476 MsG0180003549.01.T01:five_prime_UTR 40.0%
! CCAGTTAAAAAGTGTGCATG+TGG - Chr1:64119383-64119402 None:intergenic 40.0%
! CTGAGTATTGCAAACTGGAT+TGG - Chr1:64118262-64118281 None:intergenic 40.0%
! CTTGGTGTAGTCATGGAAAT+GGG + Chr1:64116971-64116990 MsG0180003549.01.T01:intron 40.0%
! CTTTGAAGATGAGATGCTTC+GGG + Chr1:64115368-64115387 MsG0180003549.01.T01:five_prime_UTR 40.0%
! GATGATGATGATATCAGTGC+AGG + Chr1:64117398-64117417 MsG0180003549.01.T01:five_prime_UTR 40.0%
! GGAAGTGTAAAGGGAGATAA+TGG + Chr1:64117563-64117582 MsG0180003549.01.T01:five_prime_UTR 40.0%
! TCTTGGTGTAGTCATGGAAA+TGG + Chr1:64116970-64116989 MsG0180003549.01.T01:intron 40.0%
! TTTTCTGCAGCAAGTGTGAT+CGG - Chr1:64117753-64117772 None:intergenic 40.0%
!! AAGAGCTGCAGAAGTTGATA+AGG + Chr1:64117487-64117506 MsG0180003549.01.T01:five_prime_UTR 40.0%
!! CCACATGCACACTTTTTAAC+TGG + Chr1:64119380-64119399 MsG0180003549.01.T01:intron 40.0%
!! GATGAAGGCCTTGATGATTT+TGG + Chr1:64115098-64115117 MsG0180003549.01.T01:five_prime_UTR 40.0%
!! GCTTTGAAGCTATTTCTGAC+TGG + Chr1:64116065-64116084 MsG0180003549.01.T01:intron 40.0%
!! GTTCTCTTGCTATTGAGAAG+AGG + Chr1:64115002-64115021 MsG0180003549.01.T01:five_prime_UTR 40.0%
!! TATGGTGCTGTACTTCATGA+TGG + Chr1:64121093-64121112 MsG0180003549.01.T01:intron 40.0%
AAAGATGAAGACCTGCTGGA+AGG + Chr1:64116276-64116295 MsG0180003549.01.T01:five_prime_UTR 45.0%
AACAGAAGAGATTGCTCAGG+AGG + Chr1:64116628-64116647 MsG0180003549.01.T01:five_prime_UTR 45.0%
AACCAAACCCAACCCAACAA+TGG + Chr1:64114779-64114798 MsG0180003549.01.T01:five_prime_UTR 45.0%
AAGAGAACGTCTAGAGGAGT+TGG + Chr1:64116652-64116671 MsG0180003549.01.T01:five_prime_UTR 45.0%
ACCAAGAAGATAGTCGTTGG+AGG + Chr1:64117596-64117615 MsG0180003549.01.T01:five_prime_UTR 45.0%
ACCTCTGTTGAAACCCTACA+AGG + Chr1:64121615-64121634 MsG0180003549.01.T01:five_prime_UTR 45.0%
ACCTGCTGGAAGGATAGATA+AGG + Chr1:64116286-64116305 MsG0180003549.01.T01:five_prime_UTR 45.0%
ACGTAGGTTAAGCAGAGATC+GGG - Chr1:64120365-64120384 None:intergenic 45.0%
AGACGCTAACACACAAGATG+AGG - Chr1:64120012-64120031 None:intergenic 45.0%
AGAGAACCAAGATCTCTCTC+TGG + Chr1:64117150-64117169 MsG0180003549.01.T01:five_prime_UTR 45.0%
AGATCGAACCTAAGACCTTG+AGG + Chr1:64115894-64115913 MsG0180003549.01.T01:intron 45.0%
AGGCCTGTTACTGTGACTTT+AGG + Chr1:64115771-64115790 MsG0180003549.01.T01:intron 45.0%
AGGCTGTGCAAGGTTTAACT+GGG + Chr1:64120440-64120459 MsG0180003549.01.T01:intron 45.0%
AGTTCCCTTTCTGATCTGAC+TGG - Chr1:64121924-64121943 None:intergenic 45.0%
ATGACTACACCAAGATCCAC+AGG - Chr1:64116965-64116984 None:intergenic 45.0%
ATGCGTTGCCCAATAACATC+TGG + Chr1:64118843-64118862 MsG0180003549.01.T01:five_prime_UTR 45.0%
CTATCACAGAAAGTAGCAGC+TGG + Chr1:64118708-64118727 MsG0180003549.01.T01:intron 45.0%
CTTAGCCAGTCAGATCAGAA+AGG + Chr1:64121916-64121935 MsG0180003549.01.T01:intron 45.0%
CTTCGTTCATCACTCCTTCT+TGG - Chr1:64116116-64116135 None:intergenic 45.0%
CTTCTTCTTCTTCTTGCTGG+TGG - Chr1:64114838-64114857 None:intergenic 45.0%
GACAACAGAAGAGATTGCTC+AGG + Chr1:64116625-64116644 MsG0180003549.01.T01:five_prime_UTR 45.0%
GACGTAGGTTAAGCAGAGAT+CGG - Chr1:64120366-64120385 None:intergenic 45.0%
GATATCAGTGCAGGTTCAGA+AGG + Chr1:64117407-64117426 MsG0180003549.01.T01:five_prime_UTR 45.0%
GATTTCGCCATTGTTGGGTT+GGG - Chr1:64114789-64114808 None:intergenic 45.0%
GCCACTATTGCGCATTAATG+AGG + Chr1:64121202-64121221 MsG0180003549.01.T01:five_prime_UTR 45.0%
GGAAAAAGATGAAGACCTGC+TGG + Chr1:64116272-64116291 MsG0180003549.01.T01:five_prime_UTR 45.0%
GGCCTGTTACTGTGACTTTA+GGG + Chr1:64115772-64115791 MsG0180003549.01.T01:intron 45.0%
GTAGATTAACCCACTTGGGT+TGG - Chr1:64115958-64115977 None:intergenic 45.0%
GTGAAGAATGGAGAGTCTTC+AGG - Chr1:64121275-64121294 None:intergenic 45.0%
GTTGTCTTCAGCCTATCTGA+AGG - Chr1:64116611-64116630 None:intergenic 45.0%
TAAGCAGAGATCGGGTAGTA+AGG - Chr1:64120357-64120376 None:intergenic 45.0%
TACCATGAGCATTATGACGC+CGG - Chr1:64115704-64115723 None:intergenic 45.0%
TCATCACCAGAGAGAGATCT+TGG - Chr1:64117159-64117178 None:intergenic 45.0%
TCCTCCAACGACTATCTTCT+TGG - Chr1:64117600-64117619 None:intergenic 45.0%
TCCTTATCTATCCTTCCAGC+AGG - Chr1:64116290-64116309 None:intergenic 45.0%
TCCTTGTAGGGTTTCAACAG+AGG - Chr1:64121619-64121638 None:intergenic 45.0%
TCTTGAGAGAAGAGATGAGG+AGG + Chr1:64117241-64117260 MsG0180003549.01.T01:five_prime_UTR 45.0%
TGACTACACCAAGATCCACA+GGG - Chr1:64116964-64116983 None:intergenic 45.0%
TGATTTCGCCATTGTTGGGT+TGG - Chr1:64114790-64114809 None:intergenic 45.0%
TGCTTTCATGGCTACTGCTT+CGG - Chr1:64114877-64114896 None:intergenic 45.0%
TGGCACCAGAATGTTATGGT+TGG + Chr1:64121113-64121132 MsG0180003549.01.T01:intron 45.0%
TGGTTCAGTCAGAGACAACA+AGG - Chr1:64116339-64116358 None:intergenic 45.0%
TTCACTCGAATCTTCAGCAG+CGG - Chr1:64117098-64117117 None:intergenic 45.0%
! ACACGAGAAGTGTGATCTCT+TGG + Chr1:64117879-64117898 MsG0180003549.01.T01:intron 45.0%
! AGAAAGTAACTTGCCACACG+AGG - Chr1:64118922-64118941 None:intergenic 45.0%
! AGACACAGCGTCTTTGAAGA+AGG - Chr1:64118734-64118753 None:intergenic 45.0%
! AGATTGTTGCTTGTACCCTG+TGG + Chr1:64116946-64116965 MsG0180003549.01.T01:intron 45.0%
! CAAGAGCTGAGAAGTATGGA+AGG + Chr1:64122148-64122167 MsG0180003549.01.T01:CDS 45.0%
! GAAGGAATGATGGTCTTGGA+AGG + Chr1:64115340-64115359 MsG0180003549.01.T01:five_prime_UTR 45.0%
! TACAAGTCTTGTAGGGCAGT+AGG - Chr1:64118073-64118092 None:intergenic 45.0%
! TCTTAGAAAGCACAGACCAG+AGG - Chr1:64119660-64119679 None:intergenic 45.0%
! TGTGGATCTTGGTGTAGTCA+TGG + Chr1:64116964-64116983 MsG0180003549.01.T01:intron 45.0%
!! GATGAAAGCTTTGAAGGCTC+TGG + Chr1:64116364-64116383 MsG0180003549.01.T01:five_prime_UTR 45.0%
!! GTGACCAGATTGACTCGAAT+GGG - Chr1:64114921-64114940 None:intergenic 45.0%
!! TCCAAGTAATGGGTCAGAAG+CGG + Chr1:64114950-64114969 MsG0180003549.01.T01:five_prime_UTR 45.0%
!! TCGAACAAACTGGTGTTGCT+TGG + Chr1:64120108-64120127 MsG0180003549.01.T01:intron 45.0%
AGAACGTCTAGAGGAGTTGG+AGG + Chr1:64116655-64116674 MsG0180003549.01.T01:five_prime_UTR 50.0%
AGGTGAGGCGTGAAGCTAAA+GGG + Chr1:64122050-64122069 MsG0180003549.01.T01:CDS 50.0%
AGTCAGAGACAACAAGGCCT+CGG - Chr1:64116333-64116352 None:intergenic 50.0%
CAGGCTGTGCAAGGTTTAAC+TGG + Chr1:64120439-64120458 MsG0180003549.01.T01:intron 50.0%
CGCTAACACACAAGATGAGG+AGG - Chr1:64120009-64120028 None:intergenic 50.0%
CTCATGGTATGCAGAGTCCA+GGG + Chr1:64115715-64115734 MsG0180003549.01.T01:five_prime_UTR 50.0%
CTCTCTGTAAGTACCTCGTG+TGG + Chr1:64118906-64118925 MsG0180003549.01.T01:intron 50.0%
CTGAAAAAGGGATCAGAGGC+AGG + Chr1:64120420-64120439 MsG0180003549.01.T01:intron 50.0%
CTGACGGTGGGGAAAATGTA+AGG + Chr1:64115751-64115770 MsG0180003549.01.T01:intron 50.0%
GAGAGAAGAGATGAGGAGGA+GGG + Chr1:64117245-64117264 MsG0180003549.01.T01:five_prime_UTR 50.0%
GCAACCCATTCGAGTCAATC+TGG + Chr1:64114914-64114933 MsG0180003549.01.T01:five_prime_UTR 50.0%
GCTTTCATGGCTACTGCTTC+GGG - Chr1:64114876-64114895 None:intergenic 50.0%
GGACGGGAAGATGAGATATG+TGG - Chr1:64118973-64118992 None:intergenic 50.0%
GGAGATACCAAAGAATGGGG+TGG + Chr1:64114976-64114995 MsG0180003549.01.T01:five_prime_UTR 50.0%
GGAGGAAAGAGAACGTCTAG+AGG + Chr1:64116646-64116665 MsG0180003549.01.T01:five_prime_UTR 50.0%
TCATGGTATGCAGAGTCCAG+GGG + Chr1:64115716-64115735 MsG0180003549.01.T01:five_prime_UTR 50.0%
TCCGCTTCTGACCCATTACT+TGG - Chr1:64114954-64114973 None:intergenic 50.0%
TCGAACCTAAGACCTTGAGG+AGG + Chr1:64115897-64115916 MsG0180003549.01.T01:intron 50.0%
TCGAGTCAATCTGGTCACGT+AGG + Chr1:64114923-64114942 MsG0180003549.01.T01:five_prime_UTR 50.0%
TCTCTTGCGATTGTGGTCCA+TGG + Chr1:64118751-64118770 MsG0180003549.01.T01:five_prime_UTR 50.0%
TGAGAGAAGAGATGAGGAGG+AGG + Chr1:64117244-64117263 MsG0180003549.01.T01:five_prime_UTR 50.0%
TGAGGCGACCACTTCAAATG+CGG + Chr1:64121801-64121820 MsG0180003549.01.T01:CDS 50.0%
TGCTTGTACCCTGTGGATCT+TGG + Chr1:64116953-64116972 MsG0180003549.01.T01:intron 50.0%
! TCTCTCTCTGGTGATGACCT+TGG + Chr1:64117162-64117181 MsG0180003549.01.T01:five_prime_UTR 50.0%
!! CGTGACCAGATTGACTCGAA+TGG - Chr1:64114922-64114941 None:intergenic 50.0%
!! GTAATGGGTCAGAAGCGGAA+AGG + Chr1:64114955-64114974 MsG0180003549.01.T01:five_prime_UTR 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG - Chr1:64115938-64115957 None:intergenic 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG - Chr1:64115939-64115958 None:intergenic 50.0%
!! TTGGGTTGGCCTAGTGGTAT+TGG - Chr1:64115944-64115963 None:intergenic 50.0%
!!! GGGTTGGGTTTGGTTTTGAG+CGG - Chr1:64114774-64114793 None:intergenic 50.0%
!!! GTTTGGTTTTGAGCGGCAGA+GGG - Chr1:64114767-64114786 None:intergenic 50.0%
ACCACTAGGCCAACCCAAGT+GGG + Chr1:64115946-64115965 MsG0180003549.01.T01:intron 55.0%
CGACAGAGAAGGAATCGCCA+AGG - Chr1:64117182-64117201 None:intergenic 55.0%
CGCTGTGTCTCTTGCGATTG+TGG + Chr1:64118744-64118763 MsG0180003549.01.T01:five_prime_UTR 55.0%
CTTTCAGCTCGCTCACTGTC+TGG - Chr1:64122013-64122032 None:intergenic 55.0%
GAAATGGGCCCGATGCACAT+GGG + Chr1:64116986-64117005 MsG0180003549.01.T01:intron 55.0%
GAACGTGCCACCCCATTCTT+TGG - Chr1:64114986-64115005 None:intergenic 55.0%
GAGGTGAGGCGTGAAGCTAA+AGG + Chr1:64122049-64122068 MsG0180003549.01.T01:CDS 55.0%
GCTCATGGTATGCAGAGTCC+AGG + Chr1:64115714-64115733 MsG0180003549.01.T01:five_prime_UTR 55.0%
GGTCCCAAGCCAATACCACT+AGG + Chr1:64115932-64115951 MsG0180003549.01.T01:intron 55.0%
GGTGAGGCGTGAAGCTAAAG+GGG + Chr1:64122051-64122070 MsG0180003549.01.T01:CDS 55.0%
GTGCTCCTCCTCAAGGTCTT+AGG - Chr1:64115905-64115924 None:intergenic 55.0%
TACCACTAGGCCAACCCAAG+TGG + Chr1:64115945-64115964 MsG0180003549.01.T01:intron 55.0%
TCAGGGCAAGAAGAACCTCG+AGG - Chr1:64116479-64116498 None:intergenic 55.0%
TCTGGCCGTGATATTGCCGT+TGG + Chr1:64118861-64118880 MsG0180003549.01.T01:five_prime_UTR 55.0%
TGCGTGCTCGTCCTTCAGAT+AGG + Chr1:64116597-64116616 MsG0180003549.01.T01:five_prime_UTR 55.0%
! AAGCTGGTCTAGCTGACGGT+GGG + Chr1:64115739-64115758 MsG0180003549.01.T01:five_prime_UTR 55.0%
! CACTTCTCTGGCTCATTCCG+AGG + Chr1:64116313-64116332 MsG0180003549.01.T01:five_prime_UTR 55.0%
!! AGTGGTATTGGCTTGGGACC+TGG - Chr1:64115932-64115951 None:intergenic 55.0%
!! CGCCATTGTTGGGTTGGGTT+TGG - Chr1:64114784-64114803 None:intergenic 55.0%
!! CTTCTTGCTGGTGGGTTCGT+TGG - Chr1:64114829-64114848 None:intergenic 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG - Chr1:64115931-64115950 None:intergenic 55.0%
!!! GGTTTGGTTTTGAGCGGCAG+AGG - Chr1:64114768-64114787 None:intergenic 55.0%
ATGCAGAGTCCAGGGGAAGC+TGG + Chr1:64115723-64115742 MsG0180003549.01.T01:five_prime_UTR 60.0%
GATCAGAGGCAGGCTGTGCA+AGG + Chr1:64120430-64120449 MsG0180003549.01.T01:intron 60.0%
GGAAATGGGCCCGATGCACA+TGG + Chr1:64116985-64117004 MsG0180003549.01.T01:intron 60.0%
GGCCGGCGTCATAATGCTCA+TGG + Chr1:64115699-64115718 MsG0180003549.01.T01:five_prime_UTR 60.0%
TCAGCTAGACCAGCTTCCCC+TGG - Chr1:64115735-64115754 None:intergenic 60.0%
TGCAAGTGACGGCATTGCCG+AGG - Chr1:64116926-64116945 None:intergenic 60.0%
! AGCTGGTCTAGCTGACGGTG+GGG + Chr1:64115740-64115759 MsG0180003549.01.T01:five_prime_UTR 60.0%
! GAAGCTGGTCTAGCTGACGG+TGG + Chr1:64115738-64115757 MsG0180003549.01.T01:five_prime_UTR 60.0%
! GGGGAAGCTGGTCTAGCTGA+CGG + Chr1:64115735-64115754 MsG0180003549.01.T01:five_prime_UTR 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG - Chr1:64115912-64115931 None:intergenic 60.0%
! TTGAGGAGGAGCACACTCCC+AGG + Chr1:64115911-64115930 MsG0180003549.01.T01:intron 60.0%
! TTTTGAGCGGCAGAGGGTGG+TGG - Chr1:64114761-64114780 None:intergenic 60.0%
!! ACCCACTTGGGTTGGCCTAG+TGG - Chr1:64115950-64115969 None:intergenic 60.0%
!!! TGGTTTTGAGCGGCAGAGGG+TGG - Chr1:64114764-64114783 None:intergenic 60.0%
GAGATCGCAGCGCGAACGTC+AGG + Chr1:64115133-64115152 MsG0180003549.01.T01:five_prime_UTR 65.0%
!! GCGGCAGAGGGTGGTGGAGA+AGG - Chr1:64114755-64114774 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 64114434 64122467 64114434 ID=MsG0180003549.01;Name=MsG0180003549.01
Chr1 mRNA 64114730 64122467 64114730 ID=MsG0180003549.01.T01;Parent=MsG0180003549.01;Name=MsG0180003549.01.T01;_AED=0.49;_eAED=0.49;_QI=2520|1|1|1|0.33|0.38|13|245|125
Chr1 exon 64114730 64115154 64114730 ID=MsG0180003549.01.T01:exon:23716;Parent=MsG0180003549.01.T01
Chr1 exon 64115279 64115411 64115279 ID=MsG0180003549.01.T01:exon:23717;Parent=MsG0180003549.01.T01
Chr1 exon 64116103 64116161 64116103 ID=MsG0180003549.01.T01:exon:23719;Parent=MsG0180003549.01.T01
Chr1 exon 64116252 64116461 64116252 ID=MsG0180003549.01.T01:exon:23720;Parent=MsG0180003549.01.T01
Chr1 exon 64117073 64117788 64117073 ID=MsG0180003549.01.T01:exon:23722;Parent=MsG0180003549.01.T01
Chr1 exon 64118717 64118911 64118717 ID=MsG0180003549.01.T01:exon:23724;Parent=MsG0180003549.01.T01
Chr1 exon 64119795 64119898 64119795 ID=MsG0180003549.01.T01:exon:23725;Parent=MsG0180003549.01.T01
Chr1 exon 64121599 64121873 64121599 ID=MsG0180003549.01.T01:exon:23727;Parent=MsG0180003549.01.T01
Chr1 exon 64121985 64122467 64121985 ID=MsG0180003549.01.T01:exon:23728;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64114730 64115154 64114730 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64115279 64115411 64115279 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64115685 64115767 64115685 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64116103 64116161 64116103 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64116252 64116461 64116252 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64116549 64116676 64116549 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64117073 64117788 64117073 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64118417 64118608 64118417 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64118717 64118911 64118717 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64119795 64119898 64119795 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64121170 64121309 64121170 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 five_prime_UTR 64121599 64121733 64121599 ID=MsG0180003549.01.T01:five_prime_utr;Parent=MsG0180003549.01.T01
Chr1 CDS 64121734 64121873 64121734 ID=MsG0180003549.01.T01:cds;Parent=MsG0180003549.01.T01
Chr1 CDS 64121985 64122222 64121985 ID=MsG0180003549.01.T01:cds;Parent=MsG0180003549.01.T01
Chr1 three_prime_UTR 64122223 64122467 64122223 ID=MsG0180003549.01.T01:three_prime_utr;Parent=MsG0180003549.01.T01
Chr1 mRNA 64114434 64121524 64114434 ID=MsG0180003549.01.T02;Parent=MsG0180003549.01;Name=MsG0180003549.01.T02;_AED=0.55;_eAED=0.56;_QI=0|0.2|0.36|0.90|0.6|0.72|11|0|373
Chr1 exon 64114434 64114513 64114434 ID=MsG0180003549.01.T02:exon:23729;Parent=MsG0180003549.01.T02
Chr1 exon 64114967 64115044 64114967 ID=MsG0180003549.01.T02:exon:23730;Parent=MsG0180003549.01.T02
Chr1 exon 64115344 64115411 64115344 ID=MsG0180003549.01.T02:exon:23731;Parent=MsG0180003549.01.T02
Chr1 exon 64116074 64116161 64116074 ID=MsG0180003549.01.T02:exon:23732;Parent=MsG0180003549.01.T02
Chr1 exon 64117073 64117171 64117073 ID=MsG0180003549.01.T02:exon:23733;Parent=MsG0180003549.01.T02
Chr1 exon 64117395 64117508 64117395 ID=MsG0180003549.01.T02:exon:23734;Parent=MsG0180003549.01.T02
Chr1 exon 64121473 64121524 64121473 ID=MsG0180003549.01.T02:exon:23735;Parent=MsG0180003549.01.T02
Chr1 CDS 64114434 64114513 64114434 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Chr1 CDS 64114967 64115044 64114967 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Chr1 CDS 64115344 64115411 64115344 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Chr1 CDS 64115685 64115767 64115685 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Chr1 CDS 64116074 64116161 64116074 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Chr1 CDS 64116549 64116676 64116549 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Chr1 CDS 64117073 64117171 64117073 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Chr1 CDS 64117395 64117508 64117395 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Chr1 CDS 64118417 64118608 64118417 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Chr1 CDS 64121170 64121309 64121170 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Chr1 CDS 64121473 64121524 64121473 ID=MsG0180003549.01.T02:cds;Parent=MsG0180003549.01.T02
Gene Sequence

>MsG0180003549.01.T01

ATGCATTACGGGATAAAAAAAGATGTGGCTGAGCTGATTAAGTTGAAAGTGGATGAACATCATACTTTGAGGCGACCACTTCAAATGCGGAAACAAAAGCCAGTTCCAATCAAATTACTGAATCCTAAGTTTGAGGAAAACTATGTTAAGGGTAGAGATTATGATCCAGACAGTGAGCGAGCTGAAAGAAAAAAATTGAAGAGAGAGGTGAGGCGTGAAGCTAAAGGGGCTGCTCGTGAAATACGTAAAGACAACTACTTCTTGCTTGATGTGAAGGAAAAAGAAAGGTCTTTAATGAGAAAGCAAGAGCTGAGAAGTATGGAAGGACTAAAGCTTTCCTTCAAGAGCAAGAACATGCTTTCAAATCTGGACAACTAG

>MsG0180003549.01.T02

ATGAACTTATTGATAAAAGGCTCAAGGGCACAACGTAGATTCAGCCGTCAAGCTATTGAAGTTAAATCGCTAAACATGAGAAGCGGAAAGGAGATACCAAAGAATGGGGTGGCACGTTCTCTTGCTATTGAGAAGAGGAAGAAGACGTTGCTTAAAGAGAATGATGGTCTTGGAAGGGATGACTTTGAAGATGAGATGCTTCGGGAAGATGATGATGAAACTGATGATATTTCAGATTTGGGCCGGCGTCATAATGCTCATGGTATGCAGAGTCCAGGGGAAGCTGGTCTAGCTGACGGTGGGGAAAATCTATTTCTGACTGGTGACTTATCCTACAGAGACATAAAACCAAGAAGGAGTGATGAACGAAGTTATTGCAAAAAGCAAGTTTTACAAGGAAAGCCAGATGAATATGACCAACTTGTCAGACAATTGGGATTTGAAATGCGTGCTCGTCCTTCAGATAGGCTGAAGACAACAGAAGAGATTGCTCAGGAGGAAAGAGAACGTCTAGAGGAGTTGGAGAAAAAACGGCAGAAGAGAATGACCGCTGCTGAAGATTCGAGTGAAGAAGACGATGAAGAATCAGAAAAGCCATCAAAAGAGAACCAAGATCTCTCTCTGAGTGATGATGATGATATCAGTGCAGGTTCAGAAGGTGAAGATGATGATATCAGTGCTGGTTCAGAAGATGAAGATGATGACGAGGACGAAGAAAGAGCTGCAGAAGTTGATAAGGTATTTTATGGAGTATTATTGCAGTATTTTGCTGTTTTGGCAAATAAGAAAACGTTGAACGTTGAATTGATTAACATGCTAGTGAAACCATTGATAGAGATGAGTACGGAAATCCCATACTTTGCTGCAATATGTGCTCGTCGCAGAATAGAAATCACTAGAAAGCAATTTGTTGAGAGTATAAAAACGCAGTTATATCATCTTATGGAACTGAAAGATCTCAAGCCACTATTGCGCATTAATGAGGAAGTAGACAAGATTAGCGCTTTGAATTTCTTTAAGTTAATAGACATGCCTGAAGACTCTCCATTCTTCACTACTGACAGTTTCAGCTATGATCTTATAACTGATATGGATGCAGCTAATGTTGAGGCTTATCTTTAG
Protein sequence

>MsG0180003549.01.T01

MHYGIKKDVAELIKLKVDEHHTLRRPLQMRKQKPVPIKLLNPKFEENYVKGRDYDPDSERAERKKLKREVRREAKGAAREIRKDNYFLLDVKEKERSLMRKQELRSMEGLKLSFKSKNMLSNLDN*

>MsG0180003549.01.T02

MNLLIKGSRAQRRFSRQAIEVKSLNMRSGKEIPKNGVARSLAIEKRKKTLLKENDGLGRDDFEDEMLREDDDETDDISDLGRRHNAHGMQSPGEAGLADGGENLFLTGDLSYRDIKPRRSDERSYCKKQVLQGKPDEYDQLVRQLGFEMRARPSDRLKTTEEIAQEERERLEELEKKRQKRMTAAEDSSEEDDEESEKPSKENQDLSLSDDDDISAGSEGEDDDISAGSEDEDDDEDEERAAEVDKVFYGVLLQYFAVLANKKTLNVELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKTQLYHLMELKDLKPLLRINEEVDKISALNFFKLIDMPEDSPFFTTDSFSYDLITDMDAANVEAYL*