AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042518.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042518.01.T01 MTR_8g015580 95.372 713 31 2 57 768 71 782 0.0 1340
MsG0880042518.01.T01 MTR_4g077550 39.157 166 79 5 57 220 55 200 1.36e-15 81.6
MsG0880042518.01.T01 MTR_5g007980 65.000 60 21 0 57 116 62 121 6.65e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042518.01.T01 AT3G21295 36.176 727 291 26 57 763 65 638 4.69e-86 286
MsG0880042518.01.T01 AT3G21295 36.115 731 294 26 57 767 65 642 5.60e-86 285
MsG0880042518.01.T01 AT1G51745 42.857 455 200 18 57 501 6 410 1.81e-71 243
MsG0880042518.01.T01 AT1G51745 58.824 51 21 0 608 658 425 475 1.21e-11 68.2
MsG0880042518.01.T01 AT1G51745 42.857 455 200 18 57 501 65 469 3.59e-70 243
MsG0880042518.01.T01 AT1G51745 44.586 157 75 3 608 763 484 629 2.70e-25 112
MsG0880042518.01.T01 AT3G21295 39.827 462 185 18 57 499 65 452 1.10e-59 211
MsG0880042518.01.T01 AT3G03140 36.517 178 74 6 57 228 62 206 1.69e-16 84.3

Find 220 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGTGGTGACCGGTTT+TGG 0.191459 8:+9914319 None:intergenic
GTAAACATGGTTTGGTTATT+AGG 0.204727 8:-9913791 MsG0880042518.01.T01:three_prime_UTR
TAGTACTTCATAAGAGATTT+TGG 0.244480 8:-9913981 MsG0880042518.01.T01:three_prime_UTR
ATAACGGATGTAAAGATTTC+AGG 0.246284 8:-9916059 MsG0880042518.01.T01:CDS
GTCATTTGTGACCAGCTTCC+CGG 0.247953 8:-9916107 MsG0880042518.01.T01:CDS
GGGACTTGAGCAAGCTTATT+GGG 0.279468 8:-9914660 MsG0880042518.01.T01:CDS
GAATCTGATGCTTATTTAAC+AGG 0.283257 8:-9914829 MsG0880042518.01.T01:CDS
AACCCGTGAAATCAGTTATC+AGG 0.283829 8:-9914046 MsG0880042518.01.T01:exon
AAAATCTGCCGTTTCATATC+TGG 0.284502 8:+9914573 None:intergenic
AGGTCAAGCAGAAGGGTTTC+GGG 0.289944 8:-9914680 MsG0880042518.01.T01:CDS
TTAGGTAATTAACCTGATAT+TGG 0.293764 8:-9913773 MsG0880042518.01.T01:three_prime_UTR
CCCTTTGACAGTTGAGGTAT+TGG 0.305901 8:-9914419 MsG0880042518.01.T01:CDS
TTTAAAGAACCGTTATGATT+AGG 0.316640 8:+9916485 None:intergenic
TAGGTAATTAACCTGATATT+GGG 0.319377 8:-9913772 MsG0880042518.01.T01:three_prime_UTR
TTTATAACAAACCCAATATC+AGG 0.320513 8:+9913761 None:intergenic
AAGTAATGAATCTGGTTGTT+TGG 0.322814 8:-9913740 MsG0880042518.01.T01:three_prime_UTR
AATGAGACTATGGAAATATC+AGG 0.322937 8:-9915885 MsG0880042518.01.T01:CDS
CGGGACTTGAGCAAGCTTAT+TGG 0.334408 8:-9914661 MsG0880042518.01.T01:CDS
CTCATTGCCATCACCAGAAT+TGG 0.335060 8:+9916595 None:intergenic
TATTCGATGTCCCATTTGTT+GGG 0.337397 8:-9915833 MsG0880042518.01.T01:CDS
AATAGAAAGGGACAGGGTTT+AGG 0.340602 8:-9916347 MsG0880042518.01.T01:CDS
ACAATCTGTATATGTATCTA+TGG 0.341389 8:+9913571 None:intergenic
TCTCTGTCATTGAGTCGTTC+AGG 0.349684 8:+9916291 None:intergenic
CTCCTTCTTCCATGCATAGA+TGG 0.350500 8:+9916458 None:intergenic
ATACCAGATTGTGACAATTC+TGG 0.360488 8:+9916521 None:intergenic
CCATCGTCTTCTGAATCATT+AGG 0.361876 8:+9916428 None:intergenic
AAGGTCAAGCAGAAGGGTTT+CGG 0.362990 8:-9914681 MsG0880042518.01.T01:CDS
AGTAATGAATCTGGTTGTTT+GGG 0.364979 8:-9913739 MsG0880042518.01.T01:three_prime_UTR
TTGAGTGGCAAAGCCTTTAT+CGG 0.373399 8:-9914445 MsG0880042518.01.T01:CDS
TGTCAAAGGGTGTCCGATAA+AGG 0.374676 8:+9914432 None:intergenic
CTTGATCTTGTGATTGACTT+GGG 0.374945 8:+9915914 None:intergenic
TTGTTATAAAGTAATGAATC+TGG 0.377844 8:-9913748 MsG0880042518.01.T01:three_prime_UTR
CCGGCCACAACATGTTCCTT+TGG 0.380452 8:-9914485 MsG0880042518.01.T01:CDS
TTACCCGCTATGTCCAATTC+TGG 0.389733 8:-9916608 MsG0880042518.01.T01:CDS
TTCGGTCTTCTTGTGGTGAC+CGG 0.394228 8:+9914313 None:intergenic
CAAGAAGGAGAATGAGACTA+TGG 0.395809 8:-9915895 MsG0880042518.01.T01:CDS
CAGAAGATTCTCAACCTTCA+TGG 0.399623 8:+9913896 None:intergenic
AGTACAATTGTTTGAAGCAT+TGG 0.400483 8:+9914732 None:intergenic
GATGAGAGGTAAACATGGTT+TGG 0.401450 8:-9913799 MsG0880042518.01.T01:three_prime_UTR
TCCTCTAGAACCCCAACAAA+TGG 0.402935 8:+9915822 None:intergenic
ACACTTGTTTCTTGCTCATC+CGG 0.406276 8:-9915093 MsG0880042518.01.T01:CDS
AAGGCATCTGCCGCTGGTTT+AGG 0.407748 8:-9916776 MsG0880042518.01.T01:CDS
GTCGACAATTGATCGGAAAC+TGG 0.411627 8:+9916967 None:intergenic
TGTTCCAATGCACTAACTTC+AGG 0.415034 8:+9915066 None:intergenic
GCTGAGACTGCTTGTGAGAA+TGG 0.416600 8:-9915975 MsG0880042518.01.T01:CDS
AACATGTTGTGGCCGGTAGC+TGG 0.418779 8:+9914492 None:intergenic
TAATCACATGAGCCTTCTCT+TGG 0.419630 8:-9913844 MsG0880042518.01.T01:three_prime_UTR
TGGTGGAGAACTGCTTGAAC+CGG 0.421405 8:+9916088 None:intergenic
TGAGAATGGGACTTCATTAA+CGG 0.426447 8:-9915961 MsG0880042518.01.T01:CDS
TTATTCGATGTCCCATTTGT+TGG 0.427856 8:-9915834 MsG0880042518.01.T01:CDS
ACAGAGAATGGCCTGGCAAA+TGG 0.429162 8:-9916275 MsG0880042518.01.T01:CDS
CTACTGAATACTATTGTAAG+AGG 0.437136 8:+9914127 None:intergenic
AGGCTTATTCTTCTCTGAAA+AGG 0.437706 8:-9916232 MsG0880042518.01.T01:CDS
TCTTGATCTTGTGATTGACT+TGG 0.440780 8:+9915913 None:intergenic
AACTGCTTGAACCGGGAAGC+TGG 0.441560 8:+9916096 None:intergenic
AGATGCCTTTGCCTTCTCAA+TGG 0.441890 8:+9916790 None:intergenic
AGAGGAATACAAGCTATAAC+AGG 0.446161 8:+9914145 None:intergenic
ATCGTGACCAACAGCAGAAC+TGG 0.446355 8:+9914972 None:intergenic
AATACAATACAAAACTGAAA+TGG 0.449573 8:+9913607 None:intergenic
CTCTTCTGACTGTCTGTGAC+CGG 0.451756 8:+9914201 None:intergenic
ATCCCTGATAACTGATTTCA+CGG 0.452899 8:+9914043 None:intergenic
CGTTTCATATCTGGAGTTAA+CGG 0.453883 8:+9914582 None:intergenic
CGGAAGTTGTCCTCGTTGAC+CGG 0.454649 8:-9914220 MsG0880042518.01.T01:CDS
GCTCCAGAATTGTCACAATC+TGG 0.454653 8:-9916524 MsG0880042518.01.T01:CDS
CCATTGTAGAGGAGAGACTT+TGG 0.456647 8:+9913662 None:intergenic
TTCATTAACGGTTCATGACC+AGG 0.456852 8:-9915949 MsG0880042518.01.T01:CDS
CACTACACTTTCTGCCATGA+AGG 0.457127 8:-9913910 MsG0880042518.01.T01:three_prime_UTR
CTCTGTCATTGAGTCGTTCA+GGG 0.458384 8:+9916292 None:intergenic
TGAGCTAGAGAGTGCTCACC+TGG 0.460676 8:-9916702 MsG0880042518.01.T01:CDS
ACGGTAAGGGTGACTTGTCC+AGG 0.466120 8:+9916684 None:intergenic
AGTTAACGGCGAAGCGTGAC+TGG 0.469047 8:+9914596 None:intergenic
CTAAAACCTTTGTCAAAGTC+CGG 0.471803 8:+9916156 None:intergenic
TTACAGAAGTTCCATTTGCC+AGG 0.474379 8:+9916264 None:intergenic
TTCTCCACCATGCGGGATAA+CGG 0.474530 8:-9916075 MsG0880042518.01.T01:CDS
CCCATTTGTTGGGGTTCTAG+AGG 0.475575 8:-9915823 MsG0880042518.01.T01:CDS
GTCAGAAACAGAAAGTTGAT+TGG 0.476992 8:-9914771 MsG0880042518.01.T01:CDS
GATAAAATGTTGAGCGGCAT+GGG 0.477166 8:-9914382 MsG0880042518.01.T01:CDS
TGGTGTAGTGTCAAATAGAA+AGG 0.477954 8:-9916360 MsG0880042518.01.T01:CDS
CGATAAAATGTTGAGCGGCA+TGG 0.484047 8:-9914383 MsG0880042518.01.T01:CDS
TTGTACTCTCATGCTGGACT+TGG 0.484489 8:-9913700 MsG0880042518.01.T01:three_prime_UTR
TCCAATACCTCAACTGTCAA+AGG 0.489297 8:+9914418 None:intergenic
CTGAGACTGCTTGTGAGAAT+GGG 0.490373 8:-9915974 MsG0880042518.01.T01:CDS
AGTGTCAAATAGAAAGGGAC+AGG 0.492213 8:-9916354 MsG0880042518.01.T01:CDS
CCCTTGAGCTTATCTACCAC+CGG 0.492367 8:+9914169 None:intergenic
GCTGTTGGTCACGATATTGT+TGG 0.494575 8:-9914964 MsG0880042518.01.T01:CDS
CAAGTCTCGAGAAAATATAT+CGG 0.497219 8:-9914862 MsG0880042518.01.T01:CDS
TTGTGCGGTGAAGCCAAAAC+CGG 0.499253 8:-9914332 MsG0880042518.01.T01:CDS
TTGATCTTGTGATTGACTTG+GGG 0.501124 8:+9915915 None:intergenic
TTTGAAGAACCTAATCATAA+CGG 0.501463 8:-9916494 MsG0880042518.01.T01:CDS
AACGACTCAATGACAGAGAA+TGG 0.502970 8:-9916287 MsG0880042518.01.T01:CDS
TGATCTCTTCGGTCTTCTTG+TGG 0.505448 8:+9914306 None:intergenic
CATGCCTGAAGTTAGTGCAT+TGG 0.505981 8:-9915070 MsG0880042518.01.T01:CDS
AGCAAAACTGTAATAGTGAG+TGG 0.506605 8:-9913634 MsG0880042518.01.T01:three_prime_UTR
ATCAACTTTCTGTTTCTGAC+CGG 0.511769 8:+9914774 None:intergenic
ATGGGAGGCGACGTGGAAGT+TGG 0.512018 8:-9914364 MsG0880042518.01.T01:CDS
TGATCTGAAGCATAACGGTA+AGG 0.513420 8:+9916670 None:intergenic
AAGGCAAAGGCATCTGCCGC+TGG 0.514727 8:-9916782 MsG0880042518.01.T01:CDS
GCGAAGCGTGACTGGCGATA+AGG 0.514906 8:+9914604 None:intergenic
TGCACTAACTTCAGGCATGC+CGG 0.515126 8:+9915074 None:intergenic
AGAAAATATATCGGCATGGA+TGG 0.517263 8:-9914853 MsG0880042518.01.T01:CDS
ATGGAAATATCAGGGCTAGT+TGG 0.517975 8:-9915876 MsG0880042518.01.T01:CDS
CCTCTAGAACCCCAACAAAT+GGG 0.521032 8:+9915823 None:intergenic
TTTGACAGTTGAGGTATTGG+AGG 0.523252 8:-9914416 MsG0880042518.01.T01:CDS
TCTCATGCTGGACTTGGACT+TGG 0.525028 8:-9913694 MsG0880042518.01.T01:three_prime_UTR
TAGATGTTGTACTCTCATGC+TGG 0.525078 8:-9913706 MsG0880042518.01.T01:three_prime_UTR
AGGCATTGAGTGGGCAGGCA+CGG 0.527471 8:-9914096 MsG0880042518.01.T01:CDS
GTCAGAAGAGAAGAGAAAAC+CGG 0.531813 8:-9914188 MsG0880042518.01.T01:CDS
GGCAGTGAAGTATGCTCGAA+GGG 0.533104 8:-9916747 MsG0880042518.01.T01:CDS
GGTAGAAACTGTAGTTCTGA+TGG 0.534918 8:-9914547 MsG0880042518.01.T01:CDS
AGCGAACACGGTGAACCAGC+TGG 0.535550 8:-9916635 MsG0880042518.01.T01:CDS
TGGTCTAGTGTACCTGGAGT+GGG 0.537353 8:+9915792 None:intergenic
GGTCACGATATTGTTGGTGA+TGG 0.538293 8:-9914958 MsG0880042518.01.T01:CDS
GGTTGTACCAGTTCTGCTGT+TGG 0.538424 8:-9914979 MsG0880042518.01.T01:CDS
GGTGTAGTGTCAAATAGAAA+GGG 0.539097 8:-9916359 MsG0880042518.01.T01:CDS
GAAGGAGTGAAGCGAATGAA+AGG 0.541607 8:-9916401 MsG0880042518.01.T01:CDS
TCGACGCCGGACTTTGACAA+AGG 0.543842 8:-9916162 MsG0880042518.01.T01:CDS
TTGTTAATTTCCTTTGCAGA+AGG 0.548115 8:+9916011 None:intergenic
AACTTCTGTAAACGTTGGTA+AGG 0.550476 8:-9916252 MsG0880042518.01.T01:CDS
CTCTGTAAATAATGTAACAT+TGG 0.551025 8:-9913821 MsG0880042518.01.T01:three_prime_UTR
CCAATACCTCAACTGTCAAA+GGG 0.551489 8:+9914419 None:intergenic
CGGACACCCTTTGACAGTTG+AGG 0.551530 8:-9914425 MsG0880042518.01.T01:CDS
TTCCATCTATGCATGGAAGA+AGG 0.552723 8:-9916460 MsG0880042518.01.T01:CDS
AAATGAGGCATTGAGTGGGC+AGG 0.558447 8:-9914101 MsG0880042518.01.T01:CDS
ATAGCGGGTAATTCTCCAGC+TGG 0.558770 8:+9916620 None:intergenic
CTCTTACAATAGTATTCAGT+AGG 0.559633 8:-9914126 MsG0880042518.01.T01:CDS
ATTCGATGTCCCATTTGTTG+GGG 0.559772 8:-9915832 MsG0880042518.01.T01:CDS
AGTTCAAAGTGGCAGTCGAA+AGG 0.561994 8:-9914922 MsG0880042518.01.T01:CDS
TTAAAGATTCCATCTATGCA+TGG 0.562022 8:-9916467 MsG0880042518.01.T01:CDS
ATAATGTAACATTGGATGAG+AGG 0.563292 8:-9913813 MsG0880042518.01.T01:three_prime_UTR
TCAGAAGACGATGGAACTGA+AGG 0.564056 8:-9916419 MsG0880042518.01.T01:CDS
ACAGGAACAAGGAACTCAGA+TGG 0.565739 8:-9914811 MsG0880042518.01.T01:CDS
AAAGTTGATTGGAACGGCAC+AGG 0.566194 8:-9914760 MsG0880042518.01.T01:CDS
GGACTTGAGCAAGCTTATTG+GGG 0.566375 8:-9914659 MsG0880042518.01.T01:CDS
CGTTAACTCCAGATATGAAA+CGG 0.572629 8:-9914581 MsG0880042518.01.T01:CDS
GTTGCTGAAGGTCAAGCAGA+AGG 0.573041 8:-9914688 MsG0880042518.01.T01:CDS
TCACCAGAATTGGACATAGC+GGG 0.573877 8:+9916605 None:intergenic
AATGGGAGCAAGAATGAAGC+TGG 0.574710 8:-9915000 MsG0880042518.01.T01:CDS
ATGGTCTAGTGTACCTGGAG+TGG 0.577258 8:+9915791 None:intergenic
ACATGCTGAGCTATCTCAGT+TGG 0.577348 8:+9916323 None:intergenic
ATTTGTTGGGGTTCTAGAGG+AGG 0.577783 8:-9915820 MsG0880042518.01.T01:CDS
AGTGGCAGTCGAAAGGGAAG+AGG 0.577792 8:-9914915 MsG0880042518.01.T01:CDS
TTCAAAGAAACCTTCTGCAA+AGG 0.578066 8:-9916021 MsG0880042518.01.T01:CDS
GTAGAAACTGTAGTTCTGAT+GGG 0.578105 8:-9914546 MsG0880042518.01.T01:CDS
CAAGCAGTTCTCCACCATGC+GGG 0.578455 8:-9916082 MsG0880042518.01.T01:CDS
GGACTTGAGGACCTTGGCAA+TGG 0.578990 8:-9916380 MsG0880042518.01.T01:CDS
GCTATGTCCAATTCTGGTGA+TGG 0.579281 8:-9916602 MsG0880042518.01.T01:CDS
GGTGGAGAACTGCTTGAACC+GGG 0.580515 8:+9916089 None:intergenic
AGTATTCAGTAGGATAAATG+AGG 0.580963 8:-9914116 MsG0880042518.01.T01:CDS
GATCTGAAGCATAACGGTAA+GGG 0.581691 8:+9916671 None:intergenic
TAGAAGTTAAATCCAGCTAC+CGG 0.582576 8:-9914504 MsG0880042518.01.T01:CDS
CATTGGATGAGAGGTAAACA+TGG 0.583472 8:-9913804 MsG0880042518.01.T01:three_prime_UTR
GTGAAATCAGTTATCAGGGA+TGG 0.583720 8:-9914041 MsG0880042518.01.T01:exon
CCAAAGGAACATGTTGTGGC+CGG 0.585729 8:+9914485 None:intergenic
GAAACCAAAGGAACATGTTG+TGG 0.585862 8:+9914481 None:intergenic
GATGGATTATGTGAAGGTGC+CGG 0.586386 8:-9914793 MsG0880042518.01.T01:CDS
TTGCTGAAGGTCAAGCAGAA+GGG 0.586648 8:-9914687 MsG0880042518.01.T01:CDS
AGGATAAATGAGGCATTGAG+TGG 0.587074 8:-9914106 MsG0880042518.01.T01:CDS
TGCCGCTGGTTTAGGCAAGA+AGG 0.587990 8:-9916768 MsG0880042518.01.T01:CDS
ATGAAAGGACTTGAGGACCT+TGG 0.588385 8:-9916386 MsG0880042518.01.T01:CDS
GAGGAGGAGAAACCCACTCC+AGG 0.588496 8:-9915804 MsG0880042518.01.T01:intron
ACCCGTGAAATCAGTTATCA+GGG 0.589475 8:-9914045 MsG0880042518.01.T01:exon
TTTACATCCGTTATCCCGCA+TGG 0.589916 8:+9916068 None:intergenic
ACCGGTGGTAGATAAGCTCA+AGG 0.590018 8:-9914170 MsG0880042518.01.T01:CDS
GTTCAAAGTGGCAGTCGAAA+GGG 0.591153 8:-9914921 MsG0880042518.01.T01:CDS
CTCAATGACAGAGAATGGCC+TGG 0.591428 8:-9916282 MsG0880042518.01.T01:CDS
AAAATGTTGAGCGGCATGGG+AGG 0.593325 8:-9914379 MsG0880042518.01.T01:CDS
ACAGTTGAGGTATTGGAGGA+CGG 0.596949 8:-9914412 MsG0880042518.01.T01:CDS
GGAAGCTGGTCACAAATGAC+AGG 0.596959 8:+9916110 None:intergenic
CTCGAGAAAATATATCGGCA+TGG 0.597250 8:-9914857 MsG0880042518.01.T01:CDS
AACTGCAAGACAGTTGCTGA+AGG 0.597808 8:-9914700 MsG0880042518.01.T01:CDS
AACTCAGATGGATTATGTGA+AGG 0.600770 8:-9914799 MsG0880042518.01.T01:CDS
TTATTTACAGAGCCAAGAGA+AGG 0.603843 8:+9913832 None:intergenic
GCAAAACTGTAATAGTGAGT+GGG 0.604915 8:-9913633 MsG0880042518.01.T01:three_prime_UTR
TGATAACTGATTTCACGGGT+TGG 0.608650 8:+9914048 None:intergenic
AATCACGGTCGACAATTGAT+CGG 0.609438 8:+9916960 None:intergenic
AATGACAGGAACTGATACCA+TGG 0.609457 8:+9916124 None:intergenic
CTTGGGGAATATCGCTACCC+TGG 0.612880 8:+9915931 None:intergenic
TTATCTGATCTGAAGCATAA+CGG 0.613891 8:+9916665 None:intergenic
GAGCGGCATGGGAGGCGACG+TGG 0.617433 8:-9914371 MsG0880042518.01.T01:CDS
GATAAATCTGACAGCGAACA+CGG 0.618599 8:-9916647 MsG0880042518.01.T01:CDS
CCAAAGTCTCTCCTCTACAA+TGG 0.619763 8:-9913662 MsG0880042518.01.T01:three_prime_UTR
AGTCAATCACAAGATCAAGA+AGG 0.619863 8:-9915910 MsG0880042518.01.T01:CDS
TTTGATACGAGATATGGATG+TGG 0.620149 8:-9917259 None:intergenic
GTATGCTGAAGCCATTGAGA+AGG 0.624473 8:-9916801 MsG0880042518.01.T01:CDS
GAAGCGAATGAAAGGACTTG+AGG 0.627675 8:-9916393 MsG0880042518.01.T01:CDS
AGGCAGTGAAGTATGCTCGA+AGG 0.629741 8:-9916748 MsG0880042518.01.T01:CDS
TCTCTGAGGTGGTTCTGCAG+TGG 0.630375 8:+9914633 None:intergenic
ATGAGACTATGGAAATATCA+GGG 0.630550 8:-9915884 MsG0880042518.01.T01:CDS
GGATAAATGAGGCATTGAGT+GGG 0.631648 8:-9914105 MsG0880042518.01.T01:CDS
TCCCTGATAACTGATTTCAC+GGG 0.638523 8:+9914044 None:intergenic
AAACAGAAAGTTGATTGGAA+CGG 0.641692 8:-9914766 MsG0880042518.01.T01:CDS
TTGACACTACACCATTGCCA+AGG 0.646697 8:+9916369 None:intergenic
AATGGAACTTCTGTAAACGT+TGG 0.647211 8:-9916257 MsG0880042518.01.T01:CDS
TGAAGCCATTGAGAAGGCAA+AGG 0.651915 8:-9916795 MsG0880042518.01.T01:CDS
GACTTGAGCAAGCTTATTGG+GGG 0.653417 8:-9914658 MsG0880042518.01.T01:CDS
ATGCTTATTTAACAGGAACA+AGG 0.654411 8:-9914822 MsG0880042518.01.T01:CDS
GAAAAGGAAGAGATCACAAG+TGG 0.655116 8:-9916216 MsG0880042518.01.T01:CDS
TAAGGAAGTGATCTCTGAGG+TGG 0.659838 8:+9914622 None:intergenic
CCTAATGATTCAGAAGACGA+TGG 0.661790 8:-9916428 MsG0880042518.01.T01:CDS
TCAGAACTACAGTTTCTACC+AGG 0.663452 8:+9914550 None:intergenic
TCTCTTGCGAGTAAATTGAG+TGG 0.666579 8:-9914460 MsG0880042518.01.T01:CDS
TGCCTTCTTGCCTAAACCAG+CGG 0.667692 8:+9916766 None:intergenic
TCATTAACGGTTCATGACCA+GGG 0.669188 8:-9915948 MsG0880042518.01.T01:CDS
GATGAGCAAGAAACAAGTGT+GGG 0.670390 8:+9915096 None:intergenic
CAATTCTGGTGATGGCAATG+AGG 0.675486 8:-9916594 MsG0880042518.01.T01:CDS
CATTGCGATAAAATGTTGAG+CGG 0.679370 8:-9914388 MsG0880042518.01.T01:CDS
TCAAGCAGTTCTCCACCATG+CGG 0.683071 8:-9916083 MsG0880042518.01.T01:CDS
TATGTATCTATGGCATGACA+AGG 0.684921 8:+9913581 None:intergenic
CCGGTGGTAGATAAGCTCAA+GGG 0.687432 8:-9914169 MsG0880042518.01.T01:CDS
GGTTGGTAGTCGATACTGCA+CGG 0.689099 8:+9914065 None:intergenic
ATCACCAGAATTGGACATAG+CGG 0.690086 8:+9916604 None:intergenic
GGATGTGGAGAAATGTGTTG+AGG 0.691554 8:-9917244 MsG0880042518.01.T01:CDS
AGAAGAGAAGAGAAAACCGG+TGG 0.691650 8:-9914185 MsG0880042518.01.T01:CDS
ACATCCGTTATCCCGCATGG+TGG 0.691702 8:+9916071 None:intergenic
CTGTCTGTGACCGGTCAACG+AGG 0.695873 8:+9914210 None:intergenic
GTGTCAAATAGAAAGGGACA+GGG 0.699218 8:-9916353 MsG0880042518.01.T01:CDS
CGATAAGGAAGTGATCTCTG+AGG 0.704346 8:+9914619 None:intergenic
GGATGAGCAAGAAACAAGTG+TGG 0.713154 8:+9915095 None:intergenic
TTACTCGCAAGAGAAACCAA+AGG 0.714513 8:+9914469 None:intergenic
AGTTGGTGATATCGATTGTG+CGG 0.715157 8:-9914347 MsG0880042518.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGTAATCATAAATGAAA+AGG + Chr8:9913794-9913813 None:intergenic 15.0%
!! TATTGTAATATTGTTTAGTT+TGG - Chr8:9915197-9915216 MsG0880042518.01.T01:intron 15.0%
!! TTAAGACATAAAAGTAAAAA+TGG - Chr8:9915900-9915919 MsG0880042518.01.T01:CDS 15.0%
!!! TGTATGTTTTAAAATTTACA+TGG + Chr8:9915270-9915289 None:intergenic 15.0%
!! AACTAAAACTAAACATTACA+AGG + Chr8:9913771-9913790 None:intergenic 20.0%
!! AATACAATACAAAACTGAAA+TGG + Chr8:9917185-9917204 None:intergenic 20.0%
!! TTGTTATAAAGTAATGAATC+TGG - Chr8:9917041-9917060 MsG0880042518.01.T01:intron 20.0%
!!! GAAAAAAAGCATTCATATAA+AGG + Chr8:9913618-9913637 None:intergenic 20.0%
!!! TTAGATAAATGTTTTTCACT+CGG - Chr8:9913719-9913738 MsG0880042518.01.T01:three_prime_UTR 20.0%
! AAATCTAACATGAAACCAAA+AGG + Chr8:9915135-9915154 None:intergenic 25.0%
! AAGAAATATAAACGAACTTG+GGG + Chr8:9915592-9915611 None:intergenic 25.0%
! ACAATCTGTATATGTATCTA+TGG + Chr8:9917221-9917240 None:intergenic 25.0%
! ACATACAAATTCAAGAATCA+CGG + Chr8:9913847-9913866 None:intergenic 25.0%
! AGAAGAAATATAAACGAACT+TGG + Chr8:9915594-9915613 None:intergenic 25.0%
! ATAATCTTGAAAAATCGAAG+AGG - Chr8:9913942-9913961 MsG0880042518.01.T01:three_prime_UTR 25.0%
! ATCAATATTTGCAAGCAAAA+AGG + Chr8:9915083-9915102 None:intergenic 25.0%
! CTCTGTAAATAATGTAACAT+TGG - Chr8:9916968-9916987 MsG0880042518.01.T01:CDS 25.0%
! CTTCAAAGTCAAAAAAATCT+GGG - Chr8:9916528-9916547 MsG0880042518.01.T01:CDS 25.0%
! GAAATTACAACAATAATGTG+AGG + Chr8:9915656-9915675 None:intergenic 25.0%
! GAAGAAATATAAACGAACTT+GGG + Chr8:9915593-9915612 None:intergenic 25.0%
! GAGTGAAAAACATTTATCTA+AGG + Chr8:9913720-9913739 None:intergenic 25.0%
! TAATCTTGAAAAATCGAAGA+GGG - Chr8:9913943-9913962 MsG0880042518.01.T01:three_prime_UTR 25.0%
! TAGGTAATTAACCTGATATT+GGG - Chr8:9917017-9917036 MsG0880042518.01.T01:intron 25.0%
! TCAATATTTGCAAGCAAAAA+GGG + Chr8:9915082-9915101 None:intergenic 25.0%
! TCTTCAAAGTCAAAAAAATC+TGG - Chr8:9916527-9916546 MsG0880042518.01.T01:CDS 25.0%
! TGCTCAAGTGAAAAATTAAA+GGG + Chr8:9915342-9915361 None:intergenic 25.0%
! TTAGGTAATTAACCTGATAT+TGG - Chr8:9917016-9917035 MsG0880042518.01.T01:intron 25.0%
! TTGCTCAAGTGAAAAATTAA+AGG + Chr8:9915343-9915362 None:intergenic 25.0%
! TTTAAAGAACCGTTATGATT+AGG + Chr8:9914307-9914326 None:intergenic 25.0%
! TTTATAACAAACCCAATATC+AGG + Chr8:9917031-9917050 None:intergenic 25.0%
! TTTATGATTACTTTACGTTC+AGG - Chr8:9913799-9913818 MsG0880042518.01.T01:three_prime_UTR 25.0%
! TTTGAAGAACCTAATCATAA+CGG - Chr8:9914295-9914314 MsG0880042518.01.T01:CDS 25.0%
!! TAGATAAATGTTTTTCACTC+GGG - Chr8:9913720-9913739 MsG0880042518.01.T01:three_prime_UTR 25.0%
!! TAGTACTTCATAAGAGATTT+TGG - Chr8:9916808-9916827 MsG0880042518.01.T01:CDS 25.0%
!! TTGAATTTGTATGTTGTTTG+AGG - Chr8:9913853-9913872 MsG0880042518.01.T01:three_prime_UTR 25.0%
!!! ACAATTTTCAAGACATTTGT+AGG - Chr8:9916917-9916936 MsG0880042518.01.T01:intron 25.0%
!!! TGTTTGCATAAGTTTGATTT+TGG - Chr8:9913890-9913909 MsG0880042518.01.T01:three_prime_UTR 25.0%
AAATTTCTTCTTCAAGCTCT+AGG - Chr8:9915517-9915536 MsG0880042518.01.T01:intron 30.0%
AAGTAATGAATCTGGTTGTT+TGG - Chr8:9917049-9917068 MsG0880042518.01.T01:intron 30.0%
AATGAGACTATGGAAATATC+AGG - Chr8:9914904-9914923 MsG0880042518.01.T01:CDS 30.0%
AGTAATGAATCTGGTTGTTT+GGG - Chr8:9917050-9917069 MsG0880042518.01.T01:intron 30.0%
AGTATTCAGTAGGATAAATG+AGG - Chr8:9916673-9916692 MsG0880042518.01.T01:CDS 30.0%
ATAATGTAACATTGGATGAG+AGG - Chr8:9916976-9916995 MsG0880042518.01.T01:intron 30.0%
ATGAGACTATGGAAATATCA+GGG - Chr8:9914905-9914924 MsG0880042518.01.T01:CDS 30.0%
ATGATTCGTTACAGTTTCTT+TGG - Chr8:9915292-9915311 MsG0880042518.01.T01:intron 30.0%
ATGCTTATTTAACAGGAACA+AGG - Chr8:9915967-9915986 MsG0880042518.01.T01:CDS 30.0%
CAAGTCTCGAGAAAATATAT+CGG - Chr8:9915927-9915946 MsG0880042518.01.T01:CDS 30.0%
CAGAAAAAGATAGTTCAAAG+TGG - Chr8:9915856-9915875 MsG0880042518.01.T01:CDS 30.0%
CTACTGAATACTATTGTAAG+AGG + Chr8:9916665-9916684 None:intergenic 30.0%
CTCTTACAATAGTATTCAGT+AGG - Chr8:9916663-9916682 MsG0880042518.01.T01:CDS 30.0%
GAATCTGATGCTTATTTAAC+AGG - Chr8:9915960-9915979 MsG0880042518.01.T01:CDS 30.0%
GGCTGTTGAATAAAAAGATT+CGG - Chr8:9916549-9916568 MsG0880042518.01.T01:CDS 30.0%
TGATTCGTTACAGTTTCTTT+GGG - Chr8:9915293-9915312 MsG0880042518.01.T01:intron 30.0%
TTAAAGATTCCATCTATGCA+TGG - Chr8:9914322-9914341 MsG0880042518.01.T01:CDS 30.0%
TTGTTAATTTCCTTTGCAGA+AGG + Chr8:9914781-9914800 None:intergenic 30.0%
TTGTTGTAATTTCTTCTGCT+AGG - Chr8:9915663-9915682 MsG0880042518.01.T01:intron 30.0%
! AAACAGAAAGTTGATTGGAA+CGG - Chr8:9916023-9916042 MsG0880042518.01.T01:CDS 30.0%
! AAGCTTTTGCATTGAGAAAT+GGG - Chr8:9915772-9915791 MsG0880042518.01.T01:intron 30.0%
! AGTACAATTGTTTGAAGCAT+TGG + Chr8:9916060-9916079 None:intergenic 30.0%
! TTATCTGATCTGAAGCATAA+CGG + Chr8:9914127-9914146 None:intergenic 30.0%
! TTCAGATAAGTTTTCTTCTG+CGG + Chr8:9915386-9915405 None:intergenic 30.0%
!! ATAACGGATGTAAAGATTTC+AGG - Chr8:9914730-9914749 MsG0880042518.01.T01:CDS 30.0%
!! ATTTTGGAAACACTTCTTTG+TGG - Chr8:9913906-9913925 MsG0880042518.01.T01:three_prime_UTR 30.0%
!! GTAAACATGGTTTGGTTATT+AGG - Chr8:9916998-9917017 MsG0880042518.01.T01:intron 30.0%
AACTTCTGTAAACGTTGGTA+AGG - Chr8:9914537-9914556 MsG0880042518.01.T01:CDS 35.0%
AATGGAACTTCTGTAAACGT+TGG - Chr8:9914532-9914551 MsG0880042518.01.T01:CDS 35.0%
AGAAAATATATCGGCATGGA+TGG - Chr8:9915936-9915955 MsG0880042518.01.T01:CDS 35.0%
AGAAGACACTAAGGAAATCA+TGG + Chr8:9915020-9915039 None:intergenic 35.0%
AGAGGAATACAAGCTATAAC+AGG + Chr8:9916647-9916666 None:intergenic 35.0%
AGCAAAACTGTAATAGTGAG+TGG - Chr8:9917155-9917174 MsG0880042518.01.T01:CDS 35.0%
AGTCAATCACAAGATCAAGA+AGG - Chr8:9914879-9914898 MsG0880042518.01.T01:CDS 35.0%
ATACCAGATTGTGACAATTC+TGG + Chr8:9914271-9914290 None:intergenic 35.0%
ATATAAACGAACTTGGGGAA+AGG + Chr8:9915587-9915606 None:intergenic 35.0%
ATCAGTTTGCACACTACTAT+TGG + Chr8:9915491-9915510 None:intergenic 35.0%
CATTGCGATAAAATGTTGAG+CGG - Chr8:9916401-9916420 MsG0880042518.01.T01:CDS 35.0%
CGTTAACTCCAGATATGAAA+CGG - Chr8:9916208-9916227 MsG0880042518.01.T01:CDS 35.0%
CTAAAACCTTTGTCAAAGTC+CGG + Chr8:9914636-9914655 None:intergenic 35.0%
GAAAAATGCGATGATCTCTT+CGG + Chr8:9916497-9916516 None:intergenic 35.0%
GCAAAACTGTAATAGTGAGT+GGG - Chr8:9917156-9917175 MsG0880042518.01.T01:CDS 35.0%
GGTGTAGTGTCAAATAGAAA+GGG - Chr8:9914430-9914449 MsG0880042518.01.T01:CDS 35.0%
TAGAAGAGTAGAAGACACTA+AGG + Chr8:9915029-9915048 None:intergenic 35.0%
TAGAAGTTAAATCCAGCTAC+CGG - Chr8:9916285-9916304 MsG0880042518.01.T01:CDS 35.0%
TATGTATCTATGGCATGACA+AGG + Chr8:9917211-9917230 None:intergenic 35.0%
TATTCGATGTCCCATTTGTT+GGG - Chr8:9914956-9914975 MsG0880042518.01.T01:CDS 35.0%
TATTTCTTCTTTGCTGCATC+AGG - Chr8:9915604-9915623 MsG0880042518.01.T01:intron 35.0%
TCAGTTTGCACACTACTATT+GGG + Chr8:9915490-9915509 None:intergenic 35.0%
TCTTGATCTTGTGATTGACT+TGG + Chr8:9914879-9914898 None:intergenic 35.0%
TGAAAAGAAAAAATCGACGC+CGG - Chr8:9914614-9914633 MsG0880042518.01.T01:CDS 35.0%
TGAGAATGGGACTTCATTAA+CGG - Chr8:9914828-9914847 MsG0880042518.01.T01:CDS 35.0%
TGGTGTAGTGTCAAATAGAA+AGG - Chr8:9914429-9914448 MsG0880042518.01.T01:CDS 35.0%
TTATTCGATGTCCCATTTGT+TGG - Chr8:9914955-9914974 MsG0880042518.01.T01:CDS 35.0%
TTATTTACAGAGCCAAGAGA+AGG + Chr8:9916960-9916979 None:intergenic 35.0%
TTCAAAGAAACCTTCTGCAA+AGG - Chr8:9914768-9914787 MsG0880042518.01.T01:CDS 35.0%
! AAAATCTGCCGTTTCATATC+TGG + Chr8:9916219-9916238 None:intergenic 35.0%
! AGGCTTATTCTTCTCTGAAA+AGG - Chr8:9914557-9914576 MsG0880042518.01.T01:CDS 35.0%
! ATCCCTGATAACTGATTTCA+CGG + Chr8:9916749-9916768 None:intergenic 35.0%
! ATGAAACCAAAAGGCATAGT+TGG + Chr8:9915126-9915145 None:intergenic 35.0%
! CATTTACCAACTATGCCTTT+TGG - Chr8:9915117-9915136 MsG0880042518.01.T01:intron 35.0%
! CGTTTCATATCTGGAGTTAA+CGG + Chr8:9916210-9916229 None:intergenic 35.0%
! CTTGATCTTGTGATTGACTT+GGG + Chr8:9914878-9914897 None:intergenic 35.0%
! GAAGCTTTTGCATTGAGAAA+TGG - Chr8:9915771-9915790 MsG0880042518.01.T01:intron 35.0%
! GTCAGAAACAGAAAGTTGAT+TGG - Chr8:9916018-9916037 MsG0880042518.01.T01:CDS 35.0%
!! AACTCAGATGGATTATGTGA+AGG - Chr8:9915990-9916009 MsG0880042518.01.T01:CDS 35.0%
!! ATCAACTTTCTGTTTCTGAC+CGG + Chr8:9916018-9916037 None:intergenic 35.0%
!! GTAGAAACTGTAGTTCTGAT+GGG - Chr8:9916243-9916262 MsG0880042518.01.T01:CDS 35.0%
!! TTGATCTTGTGATTGACTTG+GGG + Chr8:9914877-9914896 None:intergenic 35.0%
!! TTTGCTTTTAGCCATTGTAG+AGG + Chr8:9917141-9917160 None:intergenic 35.0%
AAACACTTCTTTGTGGTGCA+GGG - Chr8:9913913-9913932 MsG0880042518.01.T01:three_prime_UTR 40.0%
AAACCGAGCAAAGATCTCAA+TGG + Chr8:9915430-9915449 None:intergenic 40.0%
AAATCATGGTCTAGTGTACC+TGG + Chr8:9915006-9915025 None:intergenic 40.0%
AACCCGTGAAATCAGTTATC+AGG - Chr8:9916743-9916762 MsG0880042518.01.T01:CDS 40.0%
AACCGAGCAAAGATCTCAAT+GGG + Chr8:9915429-9915448 None:intergenic 40.0%
AACGACTCAATGACAGAGAA+TGG - Chr8:9914502-9914521 MsG0880042518.01.T01:CDS 40.0%
AATAGAAAGGGACAGGGTTT+AGG - Chr8:9914442-9914461 MsG0880042518.01.T01:CDS 40.0%
AATCACGGTCGACAATTGAT+CGG + Chr8:9913832-9913851 None:intergenic 40.0%
AATGACAGGAACTGATACCA+TGG + Chr8:9914668-9914687 None:intergenic 40.0%
ACCCGTGAAATCAGTTATCA+GGG - Chr8:9916744-9916763 MsG0880042518.01.T01:CDS 40.0%
AGTGTCAAATAGAAAGGGAC+AGG - Chr8:9914435-9914454 MsG0880042518.01.T01:CDS 40.0%
ATCACCAGAATTGGACATAG+CGG + Chr8:9914188-9914207 None:intergenic 40.0%
CAAGAAGGAGAATGAGACTA+TGG - Chr8:9914894-9914913 MsG0880042518.01.T01:CDS 40.0%
CAGAAGATTCTCAACCTTCA+TGG + Chr8:9916896-9916915 None:intergenic 40.0%
CATTGGATGAGAGGTAAACA+TGG - Chr8:9916985-9917004 MsG0880042518.01.T01:intron 40.0%
CCAATACCTCAACTGTCAAA+GGG + Chr8:9916373-9916392 None:intergenic 40.0%
CCATCGTCTTCTGAATCATT+AGG + Chr8:9914364-9914383 None:intergenic 40.0%
CCTAATGATTCAGAAGACGA+TGG - Chr8:9914361-9914380 MsG0880042518.01.T01:CDS 40.0%
CTCGAGAAAATATATCGGCA+TGG - Chr8:9915932-9915951 MsG0880042518.01.T01:CDS 40.0%
GAAAAGGAAGAGATCACAAG+TGG - Chr8:9914573-9914592 MsG0880042518.01.T01:CDS 40.0%
GAAACCAAAGGAACATGTTG+TGG + Chr8:9916311-9916330 None:intergenic 40.0%
GATAAAATGTTGAGCGGCAT+GGG - Chr8:9916407-9916426 MsG0880042518.01.T01:CDS 40.0%
GATAAATCTGACAGCGAACA+CGG - Chr8:9914142-9914161 MsG0880042518.01.T01:CDS 40.0%
GATGAGAGGTAAACATGGTT+TGG - Chr8:9916990-9917009 MsG0880042518.01.T01:intron 40.0%
GATGAGCAAGAAACAAGTGT+GGG + Chr8:9915696-9915715 None:intergenic 40.0%
GTCAGAAGAGAAGAGAAAAC+CGG - Chr8:9916601-9916620 MsG0880042518.01.T01:CDS 40.0%
GTGAAATCAGTTATCAGGGA+TGG - Chr8:9916748-9916767 MsG0880042518.01.T01:CDS 40.0%
GTGTCAAATAGAAAGGGACA+GGG - Chr8:9914436-9914455 MsG0880042518.01.T01:CDS 40.0%
TAATCACATGAGCCTTCTCT+TGG - Chr8:9916945-9916964 MsG0880042518.01.T01:intron 40.0%
TAGATGTTGTACTCTCATGC+TGG - Chr8:9917083-9917102 MsG0880042518.01.T01:intron 40.0%
TCAGAACTACAGTTTCTACC+AGG + Chr8:9916242-9916261 None:intergenic 40.0%
TCATTAACGGTTCATGACCA+GGG - Chr8:9914841-9914860 MsG0880042518.01.T01:CDS 40.0%
TCCAATACCTCAACTGTCAA+AGG + Chr8:9916374-9916393 None:intergenic 40.0%
TCTCTTGCGAGTAAATTGAG+TGG - Chr8:9916329-9916348 MsG0880042518.01.T01:CDS 40.0%
TGTTCCAATGCACTAACTTC+AGG + Chr8:9915726-9915745 None:intergenic 40.0%
TTACAGAAGTTCCATTTGCC+AGG + Chr8:9914528-9914547 None:intergenic 40.0%
TTACTCGCAAGAGAAACCAA+AGG + Chr8:9916323-9916342 None:intergenic 40.0%
TTCATTAACGGTTCATGACC+AGG - Chr8:9914840-9914859 MsG0880042518.01.T01:CDS 40.0%
TTCCATCTATGCATGGAAGA+AGG - Chr8:9914329-9914348 MsG0880042518.01.T01:CDS 40.0%
TTGAGTGGCAAAGCCTTTAT+CGG - Chr8:9916344-9916363 MsG0880042518.01.T01:CDS 40.0%
! ACACTTGTTTCTTGCTCATC+CGG - Chr8:9915696-9915715 MsG0880042518.01.T01:intron 40.0%
! ATGGAAATATCAGGGCTAGT+TGG - Chr8:9914913-9914932 MsG0880042518.01.T01:CDS 40.0%
! ATTCGATGTCCCATTTGTTG+GGG - Chr8:9914957-9914976 MsG0880042518.01.T01:CDS 40.0%
! CAGGTTAGCTATACTTATGC+TGG - Chr8:9915623-9915642 MsG0880042518.01.T01:intron 40.0%
! GATCATCGCATTTTTCTCGT+AGG - Chr8:9916501-9916520 MsG0880042518.01.T01:CDS 40.0%
! GATCTGAAGCATAACGGTAA+GGG + Chr8:9914121-9914140 None:intergenic 40.0%
! GGTATGTTCTAAGCAGTCAA+TGG + Chr8:9915249-9915268 None:intergenic 40.0%
! TATGAAACGGCAGATTTTCC+TGG - Chr8:9916221-9916240 MsG0880042518.01.T01:CDS 40.0%
! TCCCTGATAACTGATTTCAC+GGG + Chr8:9916748-9916767 None:intergenic 40.0%
! TGATAACTGATTTCACGGGT+TGG + Chr8:9916744-9916763 None:intergenic 40.0%
! TGATCTGAAGCATAACGGTA+AGG + Chr8:9914122-9914141 None:intergenic 40.0%
! TTAGCACTAACTCTGCCTTT+TGG - Chr8:9915153-9915172 MsG0880042518.01.T01:intron 40.0%
!! AGGATAAATGAGGCATTGAG+TGG - Chr8:9916683-9916702 MsG0880042518.01.T01:CDS 40.0%
!! AGGCATAGTTGGTAAATGTG+AGG + Chr8:9915115-9915134 None:intergenic 40.0%
!! AGTTGGTGATATCGATTGTG+CGG - Chr8:9916442-9916461 MsG0880042518.01.T01:CDS 40.0%
!! GCATAGTTGGTAAATGTGAG+GGG + Chr8:9915113-9915132 None:intergenic 40.0%
!! GGATAAATGAGGCATTGAGT+GGG - Chr8:9916684-9916703 MsG0880042518.01.T01:CDS 40.0%
!! GGCATAGTTGGTAAATGTGA+GGG + Chr8:9915114-9915133 None:intergenic 40.0%
!! GGTAGAAACTGTAGTTCTGA+TGG - Chr8:9916242-9916261 MsG0880042518.01.T01:CDS 40.0%
!! TTTGACAGTTGAGGTATTGG+AGG - Chr8:9916373-9916392 MsG0880042518.01.T01:CDS 40.0%
AAAGATCTCAATGGGGAAGC+GGG + Chr8:9915421-9915440 None:intergenic 45.0%
AACTGCAAGACAGTTGCTGA+AGG - Chr8:9916089-9916108 MsG0880042518.01.T01:CDS 45.0%
AAGGTCAAGCAGAAGGGTTT+CGG - Chr8:9916108-9916127 MsG0880042518.01.T01:CDS 45.0%
AATGGGAGCAAGAATGAAGC+TGG - Chr8:9915789-9915808 MsG0880042518.01.T01:intron 45.0%
ACAGGAACAAGGAACTCAGA+TGG - Chr8:9915978-9915997 MsG0880042518.01.T01:CDS 45.0%
ACATGCTGAGCTATCTCAGT+TGG + Chr8:9914469-9914488 None:intergenic 45.0%
ACCGAGCAAAGATCTCAATG+GGG + Chr8:9915428-9915447 None:intergenic 45.0%
AGAAGAGAAGAGAAAACCGG+TGG - Chr8:9916604-9916623 MsG0880042518.01.T01:CDS 45.0%
AGATGCCTTTGCCTTCTCAA+TGG + Chr8:9914002-9914021 None:intergenic 45.0%
AGTTCAAAGTGGCAGTCGAA+AGG - Chr8:9915867-9915886 MsG0880042518.01.T01:CDS 45.0%
ATGAAAGGACTTGAGGACCT+TGG - Chr8:9914403-9914422 MsG0880042518.01.T01:CDS 45.0%
CAAAGATCTCAATGGGGAAG+CGG + Chr8:9915422-9915441 None:intergenic 45.0%
CACTACACTTTCTGCCATGA+AGG - Chr8:9916879-9916898 MsG0880042518.01.T01:intron 45.0%
CATGCCTGAAGTTAGTGCAT+TGG - Chr8:9915719-9915738 MsG0880042518.01.T01:intron 45.0%
CCAAAGTCTCTCCTCTACAA+TGG - Chr8:9917127-9917146 MsG0880042518.01.T01:CDS 45.0%
CCATTGTAGAGGAGAGACTT+TGG + Chr8:9917130-9917149 None:intergenic 45.0%
CCCTTTGACAGTTGAGGTAT+TGG - Chr8:9916370-9916389 MsG0880042518.01.T01:CDS 45.0%
CGATAAAATGTTGAGCGGCA+TGG - Chr8:9916406-9916425 MsG0880042518.01.T01:CDS 45.0%
CGATAAGGAAGTGATCTCTG+AGG + Chr8:9916173-9916192 None:intergenic 45.0%
CTCATTGCCATCACCAGAAT+TGG + Chr8:9914197-9914216 None:intergenic 45.0%
CTCCTTCTTCCATGCATAGA+TGG + Chr8:9914334-9914353 None:intergenic 45.0%
CTCTGTCATTGAGTCGTTCA+GGG + Chr8:9914500-9914519 None:intergenic 45.0%
CTGAGACTGCTTGTGAGAAT+GGG - Chr8:9914815-9914834 MsG0880042518.01.T01:CDS 45.0%
GAAACACTTCTTTGTGGTGC+AGG - Chr8:9913912-9913931 MsG0880042518.01.T01:three_prime_UTR 45.0%
GAAGCGAATGAAAGGACTTG+AGG - Chr8:9914396-9914415 MsG0880042518.01.T01:CDS 45.0%
GAAGGAGTGAAGCGAATGAA+AGG - Chr8:9914388-9914407 MsG0880042518.01.T01:CDS 45.0%
GACTTGAGCAAGCTTATTGG+GGG - Chr8:9916131-9916150 MsG0880042518.01.T01:CDS 45.0%
GCTATGTCCAATTCTGGTGA+TGG - Chr8:9914187-9914206 MsG0880042518.01.T01:CDS 45.0%
GCTCCAGAATTGTCACAATC+TGG - Chr8:9914265-9914284 MsG0880042518.01.T01:CDS 45.0%
GCTGTTGGTCACGATATTGT+TGG - Chr8:9915825-9915844 MsG0880042518.01.T01:CDS 45.0%
GGACTTGAGCAAGCTTATTG+GGG - Chr8:9916130-9916149 MsG0880042518.01.T01:CDS 45.0%
GGATGAGCAAGAAACAAGTG+TGG + Chr8:9915697-9915716 None:intergenic 45.0%
GGATGTGGAGAAATGTGTTG+AGG - Chr8:9913545-9913564 MsG0880042518.01.T01:three_prime_UTR 45.0%
GGGACTTGAGCAAGCTTATT+GGG - Chr8:9916129-9916148 MsG0880042518.01.T01:CDS 45.0%
GTATGCTGAAGCCATTGAGA+AGG - Chr8:9913988-9914007 MsG0880042518.01.T01:three_prime_UTR 45.0%
GTCGACAATTGATCGGAAAC+TGG + Chr8:9913825-9913844 None:intergenic 45.0%
GTTCAAAGTGGCAGTCGAAA+GGG - Chr8:9915868-9915887 MsG0880042518.01.T01:CDS 45.0%
TCACCAGAATTGGACATAGC+GGG + Chr8:9914187-9914206 None:intergenic 45.0%
TCAGAAGACGATGGAACTGA+AGG - Chr8:9914370-9914389 MsG0880042518.01.T01:CDS 45.0%
TCCCCATTGAGATCTTTGCT+CGG - Chr8:9915424-9915443 MsG0880042518.01.T01:intron 45.0%
TCTCTGTCATTGAGTCGTTC+AGG + Chr8:9914501-9914520 None:intergenic 45.0%
TGAAGCCATTGAGAAGGCAA+AGG - Chr8:9913994-9914013 MsG0880042518.01.T01:three_prime_UTR 45.0%
TGATCTCTTCGGTCTTCTTG+TGG + Chr8:9916486-9916505 None:intergenic 45.0%
TTACCCGCTATGTCCAATTC+TGG - Chr8:9914181-9914200 MsG0880042518.01.T01:CDS 45.0%
TTGACACTACACCATTGCCA+AGG + Chr8:9914423-9914442 None:intergenic 45.0%
TTGCTGAAGGTCAAGCAGAA+GGG - Chr8:9916102-9916121 MsG0880042518.01.T01:CDS 45.0%
TTGTACTCTCATGCTGGACT+TGG - Chr8:9917089-9917108 MsG0880042518.01.T01:intron 45.0%
TTTACATCCGTTATCCCGCA+TGG + Chr8:9914724-9914743 None:intergenic 45.0%
! AAAGTTGATTGGAACGGCAC+AGG - Chr8:9916029-9916048 MsG0880042518.01.T01:CDS 45.0%
! GGTCACGATATTGTTGGTGA+TGG - Chr8:9915831-9915850 MsG0880042518.01.T01:CDS 45.0%
! TAAGGAAGTGATCTCTGAGG+TGG + Chr8:9916170-9916189 None:intergenic 45.0%
!! ACAGTTGAGGTATTGGAGGA+CGG - Chr8:9916377-9916396 MsG0880042518.01.T01:CDS 45.0%
!! AGTTGGTAAATGTGAGGGGA+AGG + Chr8:9915109-9915128 None:intergenic 45.0%
!! ATTTGTTGGGGTTCTAGAGG+AGG - Chr8:9914969-9914988 MsG0880042518.01.T01:CDS 45.0%
!! CAATTCTGGTGATGGCAATG+AGG - Chr8:9914195-9914214 MsG0880042518.01.T01:CDS 45.0%
!! CCTCTAGAACCCCAACAAAT+GGG + Chr8:9914969-9914988 None:intergenic 45.0%
!! GATGGATTATGTGAAGGTGC+CGG - Chr8:9915996-9916015 MsG0880042518.01.T01:CDS 45.0%
!! TCCTCTAGAACCCCAACAAA+TGG + Chr8:9914970-9914989 None:intergenic 45.0%
!! TGTCAAAGGGTGTCCGATAA+AGG + Chr8:9916360-9916379 None:intergenic 45.0%
!!! GGTTTTAGAGAGTACTGCCA+TGG - Chr8:9914648-9914667 MsG0880042518.01.T01:CDS 45.0%
AAAATGTTGAGCGGCATGGG+AGG - Chr8:9916410-9916429 MsG0880042518.01.T01:CDS 50.0%
ACAGAGAATGGCCTGGCAAA+TGG - Chr8:9914514-9914533 MsG0880042518.01.T01:CDS 50.0%
ACCGGTGGTAGATAAGCTCA+AGG - Chr8:9916619-9916638 MsG0880042518.01.T01:CDS 50.0%
AGGCAGTGAAGTATGCTCGA+AGG - Chr8:9914041-9914060 MsG0880042518.01.T01:exon 50.0%
AGGTCAAGCAGAAGGGTTTC+GGG - Chr8:9916109-9916128 MsG0880042518.01.T01:CDS 50.0%
ATCGTGACCAACAGCAGAAC+TGG + Chr8:9915820-9915839 None:intergenic 50.0%
ATGGTCTAGTGTACCTGGAG+TGG + Chr8:9915001-9915020 None:intergenic 50.0%
CCAAAGGAACATGTTGTGGC+CGG + Chr8:9916307-9916326 None:intergenic 50.0%
CCCTTGAGCTTATCTACCAC+CGG + Chr8:9916623-9916642 None:intergenic 50.0%
CCGGTGGTAGATAAGCTCAA+GGG - Chr8:9916620-9916639 MsG0880042518.01.T01:CDS 50.0%
CGGGACTTGAGCAAGCTTAT+TGG - Chr8:9916128-9916147 MsG0880042518.01.T01:CDS 50.0%
CTCAATGACAGAGAATGGCC+TGG - Chr8:9914507-9914526 MsG0880042518.01.T01:CDS 50.0%
CTCTTCTGACTGTCTGTGAC+CGG + Chr8:9916591-9916610 None:intergenic 50.0%
CTTCTTTGTGGTGCAGGGAT+TGG - Chr8:9913918-9913937 MsG0880042518.01.T01:three_prime_UTR 50.0%
GCTGAGACTGCTTGTGAGAA+TGG - Chr8:9914814-9914833 MsG0880042518.01.T01:CDS 50.0%
GGAAGCTGGTCACAAATGAC+AGG + Chr8:9914682-9914701 None:intergenic 50.0%
GGCAGTGAAGTATGCTCGAA+GGG - Chr8:9914042-9914061 MsG0880042518.01.T01:exon 50.0%
GGTTGTACCAGTTCTGCTGT+TGG - Chr8:9915810-9915829 MsG0880042518.01.T01:CDS 50.0%
GTCATTTGTGACCAGCTTCC+CGG - Chr8:9914682-9914701 MsG0880042518.01.T01:CDS 50.0%
GTTGCTGAAGGTCAAGCAGA+AGG - Chr8:9916101-9916120 MsG0880042518.01.T01:CDS 50.0%
TCAAGCAGTTCTCCACCATG+CGG - Chr8:9914706-9914725 MsG0880042518.01.T01:CDS 50.0%
TCTCATGCTGGACTTGGACT+TGG - Chr8:9917095-9917114 MsG0880042518.01.T01:intron 50.0%
TGCACTAACTTCAGGCATGC+CGG + Chr8:9915718-9915737 None:intergenic 50.0%
TGCCTTCTTGCCTAAACCAG+CGG + Chr8:9914026-9914045 None:intergenic 50.0%
TGGTCTAGTGTACCTGGAGT+GGG + Chr8:9915000-9915019 None:intergenic 50.0%
TGGTGGAGAACTGCTTGAAC+CGG + Chr8:9914704-9914723 None:intergenic 50.0%
TTCGGTCTTCTTGTGGTGAC+CGG + Chr8:9916479-9916498 None:intergenic 50.0%
TTCTCCACCATGCGGGATAA+CGG - Chr8:9914714-9914733 MsG0880042518.01.T01:CDS 50.0%
TTGTGCGGTGAAGCCAAAAC+CGG - Chr8:9916457-9916476 MsG0880042518.01.T01:CDS 50.0%
! CCCATTTGTTGGGGTTCTAG+AGG - Chr8:9914966-9914985 MsG0880042518.01.T01:CDS 50.0%
! TCACTCGGGTGTCATGACAT+TGG - Chr8:9913734-9913753 MsG0880042518.01.T01:three_prime_UTR 50.0%
!! AAATGAGGCATTGAGTGGGC+AGG - Chr8:9916688-9916707 MsG0880042518.01.T01:CDS 50.0%
!! ATAGCGGGTAATTCTCCAGC+TGG + Chr8:9914172-9914191 None:intergenic 50.0%
!! CTTCTTGTGGTGACCGGTTT+TGG + Chr8:9916473-9916492 None:intergenic 50.0%
!! GGTTGGTAGTCGATACTGCA+CGG + Chr8:9916727-9916746 None:intergenic 50.0%
AACATGTTGTGGCCGGTAGC+TGG + Chr8:9916300-9916319 None:intergenic 55.0%
AACTGCTTGAACCGGGAAGC+TGG + Chr8:9914696-9914715 None:intergenic 55.0%
ACATCCGTTATCCCGCATGG+TGG + Chr8:9914721-9914740 None:intergenic 55.0%
AGTGGCAGTCGAAAGGGAAG+AGG - Chr8:9915874-9915893 MsG0880042518.01.T01:CDS 55.0%
AGTTAACGGCGAAGCGTGAC+TGG + Chr8:9916196-9916215 None:intergenic 55.0%
CAAGCAGTTCTCCACCATGC+GGG - Chr8:9914707-9914726 MsG0880042518.01.T01:CDS 55.0%
CCGGCCACAACATGTTCCTT+TGG - Chr8:9916304-9916323 MsG0880042518.01.T01:CDS 55.0%
CGGAAGTTGTCCTCGTTGAC+CGG - Chr8:9916569-9916588 MsG0880042518.01.T01:CDS 55.0%
CGGACACCCTTTGACAGTTG+AGG - Chr8:9916364-9916383 MsG0880042518.01.T01:CDS 55.0%
CTTGGGGAATATCGCTACCC+TGG + Chr8:9914861-9914880 None:intergenic 55.0%
GGACTTGAGGACCTTGGCAA+TGG - Chr8:9914409-9914428 MsG0880042518.01.T01:CDS 55.0%
GGTGGAGAACTGCTTGAACC+GGG + Chr8:9914703-9914722 None:intergenic 55.0%
TCGACGCCGGACTTTGACAA+AGG - Chr8:9914627-9914646 MsG0880042518.01.T01:CDS 55.0%
! ACGGTAAGGGTGACTTGTCC+AGG + Chr8:9914108-9914127 None:intergenic 55.0%
!! AAGGCATCTGCCGCTGGTTT+AGG - Chr8:9914013-9914032 MsG0880042518.01.T01:three_prime_UTR 55.0%
!! TCTCTGAGGTGGTTCTGCAG+TGG + Chr8:9916159-9916178 None:intergenic 55.0%
!! TGAGCTAGAGAGTGCTCACC+TGG - Chr8:9914087-9914106 MsG0880042518.01.T01:CDS 55.0%
!! TGCCGCTGGTTTAGGCAAGA+AGG - Chr8:9914021-9914040 MsG0880042518.01.T01:three_prime_UTR 55.0%
AGCGAACACGGTGAACCAGC+TGG - Chr8:9914154-9914173 MsG0880042518.01.T01:CDS 60.0%
ATGGGAGGCGACGTGGAAGT+TGG - Chr8:9916425-9916444 MsG0880042518.01.T01:CDS 60.0%
CTGTCTGTGACCGGTCAACG+AGG + Chr8:9916582-9916601 None:intergenic 60.0%
GAGGAGGAGAAACCCACTCC+AGG - Chr8:9914985-9915004 MsG0880042518.01.T01:CDS 60.0%
GCGAAGCGTGACTGGCGATA+AGG + Chr8:9916188-9916207 None:intergenic 60.0%
!! AAGGCAAAGGCATCTGCCGC+TGG - Chr8:9914007-9914026 MsG0880042518.01.T01:three_prime_UTR 60.0%
!! AGGCATTGAGTGGGCAGGCA+CGG - Chr8:9916693-9916712 MsG0880042518.01.T01:CDS 60.0%
GAGCGGCATGGGAGGCGACG+TGG - Chr8:9916418-9916437 MsG0880042518.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 9913543 9917268 9913543 ID=MsG0880042518.01;Name=MsG0880042518.01
Chr8 mRNA 9913543 9917268 9913543 ID=MsG0880042518.01.T01;Parent=MsG0880042518.01;Name=MsG0880042518.01.T01;_AED=0.26;_eAED=0.30;_QI=0|0.33|0.5|1|1|0.75|4|517|768
Chr8 exon 9913543 9915126 9913543 ID=MsG0880042518.01.T01:exon:2674;Parent=MsG0880042518.01.T01
Chr8 exon 9915805 9916877 9915805 ID=MsG0880042518.01.T01:exon:2673;Parent=MsG0880042518.01.T01
Chr8 exon 9916966 9916990 9916966 ID=MsG0880042518.01.T01:exon:2672;Parent=MsG0880042518.01.T01
Chr8 exon 9917127 9917268 9917127 ID=MsG0880042518.01.T01:exon:2671;Parent=MsG0880042518.01.T01
Chr8 CDS 9917127 9917268 9917127 ID=MsG0880042518.01.T01:cds;Parent=MsG0880042518.01.T01
Chr8 CDS 9916966 9916990 9916966 ID=MsG0880042518.01.T01:cds;Parent=MsG0880042518.01.T01
Chr8 CDS 9915805 9916877 9915805 ID=MsG0880042518.01.T01:cds;Parent=MsG0880042518.01.T01
Chr8 CDS 9914060 9915126 9914060 ID=MsG0880042518.01.T01:cds;Parent=MsG0880042518.01.T01
Chr8 three_prime_UTR 9913543 9914059 9913543 ID=MsG0880042518.01.T01:three_prime_utr;Parent=MsG0880042518.01.T01
Gene Sequence

>MsG0880042518.01.T01

ATGGATGTGGAGAAATGTGTTGAGGTTATTTTGTATCATCACACTTGTGTGCAAGTCACTGATTTGCTTGAGCCTTTATATGAATGCTTTTTTTCTTCTGAAACTATCTGTAGCAAAAGATCAGTGTGCAATCTTTTGACGAGCCAGTTTCCGATCAATTGTCGACCGGATTGGTATAATCTTGAAAAATCGAAGAGGGTAAAAGCTTTTCGTTGTAGAGAGTATGCTGAAGCCATTGAGAAGGCAAAGGCATCTGCCGCTGGTTTAGGCAAGAAGGCAGTGAAGTATGCTCGAAGGGAAGATGCTATTCTTCATGCTCTTGAGCTAGAGAGTGCTCACCTGGACAAGTCACCCTTACCGTTATGCTTCAGATCAGATAAATCTGACAGCGAACACGGTGAACCAGCTGGAGAATTACCCGCTATGTCCAATTCTGGTGATGGCAATGAGGATGTGATTGATGATTTGAGTGACTCTGAAGAAGACAATTCTAATTCAGCTCCAGAATTGTCACAATCTGGTATATCTTTTGAAGAACCTAATCATAACGGTTCTTTAAAGATTCCATCTATGCATGGAAGAAGGAGAAGAACACCTAATGATTCAGAAGACGATGGAACTGAAGGAGTGAAGCGAATGAAAGGACTTGAGGACCTTGGCAATGGTGTAGTGTCAAATAGAAAGGGACAGGGTTTAGGTCCAACTGAGATAGCTCAGCATGTCAGTGCTTCCCTGAACGACTCAATGACAGAGAATGGCCTGGCAAATGGAACTTCTGTAAACGTTGGTAAGGCTTATTCTTCTCTGAAAAGGAAGAGATCACAAGTGGCAAATGTTCATGAACTCTTGAAAAGAAAAAATCGACGCCGGACTTTGACAAAGGTTTTAGAGAGTACTGCCATGGTATCAGTTCCTGTCATTTGTGACCAGCTTCCCGGTTCAAGCAGTTCTCCACCATGCGGGATAACGGATGTAAAGATTTCAGGATTAGATTCTACTGATTCAAAGAAACCTTCTGCAAAGGAAATTAACAATTCAGATAGTGCTGCTGAGACTGCTTGTGAGAATGGGACTTCATTAACGGTTCATGACCAGGGTAGCGATATTCCCCAAGTCAATCACAAGATCAAGAAGGAGAATGAGACTATGGAAATATCAGGGCTAGTTGGCTATGATTCTTCTGACATGTTATTCGATGTCCCATTTGTTGGGGTTCTAGAGGAGGAGAAACCCACTCCAGGTATCTCACCCACACTTGTTTCTTGCTCATCCGGCATGCCTGAAGTTAGTGCATTGGAACAGAAATCTTGTGAAGCTAATCAATCAGAAGCTTTTGCATTGAGAAATGGGAGCAAGAATGAAGCTGGTTGTACCAGTTCTGCTGTTGGTCACGATATTGTTGGTGATGGAGCAGAAAAAGATAGTTCAAAGTGGCAGTCGAAAGGGAAGAGGAATTTAAGACATAAAAGTAAAAATGGAAAACAAGTCTCGAGAAAATATATCGGCATGGATGGTGAATCTGATGCTTATTTAACAGGAACAAGGAACTCAGATGGATTATGTGAAGGTGCCGGTCAGAAACAGAAAGTTGATTGGAACGGCACAGGTGTATCCAATGCTTCAAACAATTGTACTTCACAAATCAACTGCAAGACAGTTGCTGAAGGTCAAGCAGAAGGGTTTCGGGACTTGAGCAAGCTTATTGGGGGTACCACTGCAGAACCACCTCAGAGATCACTTCCTTATCGCCAGTCACGCTTCGCCGTTAACTCCAGATATGAAACGGCAGATTTTCCTGGTAGAAACTGTAGTTCTGATGGGACATTATACGATGTTAAACTAGAAGTTAAATCCAGCTACCGGCCACAACATGTTCCTTTGGTTTCTCTTGCGAGTAAATTGAGTGGCAAAGCCTTTATCGGACACCCTTTGACAGTTGAGGTATTGGAGGACGGTCATTGCGATAAAATGTTGAGCGGCATGGGAGGCGACGTGGAAGTTGGTGATATCGATTGTGCGGTGAAGCCAAAACCGGTCACCACAAGAAGACCGAAGAGATCATCGCATTTTTCTCGTAGGAAATCTTCAAAGTCAAAAAAATCTGGGCTGTTGAATAAAAAGATTCGGAAGTTGTCCTCGTTGACCGGTCACAGACAGTCAGAAGAGAAGAGAAAACCGGTGGTAGATAAGCTCAAGGGTCCTGTTATAGCTTGTATTCCTCTTACAATAGTATTCAGTAGGATAAATGAGGCATTGAGTGGGCAGGCACGGTCGACGCACCGTGCAGTATCGACTACCAACCCGTGA

Protein sequence

>MsG0880042518.01.T01

MDVEKCVEVILYHHTCVQVTDLLEPLYECFFSSETICSKRSVCNLLTSQFPINCRPDWYNLEKSKRVKAFRCREYAEAIEKAKASAAGLGKKAVKYARREDAILHALELESAHLDKSPLPLCFRSDKSDSEHGEPAGELPAMSNSGDGNEDVIDDLSDSEEDNSNSAPELSQSGISFEEPNHNGSLKIPSMHGRRRRTPNDSEDDGTEGVKRMKGLEDLGNGVVSNRKGQGLGPTEIAQHVSASLNDSMTENGLANGTSVNVGKAYSSLKRKRSQVANVHELLKRKNRRRTLTKVLESTAMVSVPVICDQLPGSSSSPPCGITDVKISGLDSTDSKKPSAKEINNSDSAAETACENGTSLTVHDQGSDIPQVNHKIKKENETMEISGLVGYDSSDMLFDVPFVGVLEEEKPTPGISPTLVSCSSGMPEVSALEQKSCEANQSEAFALRNGSKNEAGCTSSAVGHDIVGDGAEKDSSKWQSKGKRNLRHKSKNGKQVSRKYIGMDGESDAYLTGTRNSDGLCEGAGQKQKVDWNGTGVSNASNNCTSQINCKTVAEGQAEGFRDLSKLIGGTTAEPPQRSLPYRQSRFAVNSRYETADFPGRNCSSDGTLYDVKLEVKSSYRPQHVPLVSLASKLSGKAFIGHPLTVEVLEDGHCDKMLSGMGGDVEVGDIDCAVKPKPVTTRRPKRSSHFSRRKSSKSKKSGLLNKKIRKLSSLTGHRQSEEKRKPVVDKLKGPVIACIPLTIVFSRINEALSGQARSTHRAVSTTNP*