AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010233.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010233.01.T01 MTR_2g079460 95.601 341 14 1 1 340 1 341 0.0 639
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010233.01.T01 AT5G53800 73.653 167 44 0 174 340 185 351 1.15e-87 268

Find 109 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTCTGGTTACAGATTTA+TGG 0.131415 2:+66450684 MsG0280010233.01.T01:intron
CTTCCTACGGCGTCGTTTAT+CGG 0.196052 2:-66447643 None:intergenic
ACTAATTTATGGGGAAAGTA+TGG 0.215379 2:+66447981 MsG0280010233.01.T01:CDS
ACTTATTGTGGATATGAATT+AGG 0.218029 2:+66451745 MsG0280010233.01.T01:three_prime_UTR
AACTCATTTCATGGATATTA+TGG 0.223435 2:+66451800 MsG0280010233.01.T01:three_prime_UTR
TGGTTCGGAGTCGGAGTATT+CGG 0.235691 2:+66447758 MsG0280010233.01.T01:CDS
GATGAATCGGATTCGGATTC+CGG 0.241858 2:+66447696 MsG0280010233.01.T01:CDS
AATGAAGAAGAAGGAGAAAA+AGG 0.242745 2:+66447935 MsG0280010233.01.T01:CDS
TTACTTGGACTGATCGAAAT+TGG 0.258824 2:+66452037 MsG0280010233.01.T01:three_prime_UTR
ATATGGAGCATCTGTCTAAT+TGG 0.263850 2:+66450360 MsG0280010233.01.T01:CDS
CATCAGGGTCCAACCTTCTC+TGG 0.319994 2:-66451696 None:intergenic
AAAATGAAAATTTCACATAA+AGG 0.338744 2:-66452126 None:intergenic
AAGGTGCTGTGACTAATTTA+TGG 0.342345 2:+66447970 MsG0280010233.01.T01:CDS
ATTATGACAAACTCATTTCA+TGG 0.359860 2:+66451791 MsG0280010233.01.T01:three_prime_UTR
GAGAGAGGAAGGAGAGGAAG+AGG 0.365433 2:+66447796 MsG0280010233.01.T01:CDS
GGTTCGGAGTCGGAGTATTC+GGG 0.365915 2:+66447759 MsG0280010233.01.T01:CDS
ATCGGTTTGTGTGTCTATAT+CGG 0.367357 2:-66447568 None:intergenic
GATATATGGCCTGGACAGTT+TGG 0.369205 2:-66451989 None:intergenic
CATGGATATTATGGTGTCTT+GGG 0.370504 2:+66451809 MsG0280010233.01.T01:three_prime_UTR
TTCGGATTCCGGTTCGGATT+CGG 0.373650 2:+66447707 MsG0280010233.01.T01:CDS
GCAGCCTTGTGCATCTTACT+TGG 0.380541 2:+66452022 MsG0280010233.01.T01:three_prime_UTR
ACTGTCTACACGGCAGCATC+AGG 0.397203 2:-66451712 None:intergenic
AGGTGCTGTGACTAATTTAT+GGG 0.400642 2:+66447971 MsG0280010233.01.T01:CDS
ATCGGATTCGGATTCCGGTT+CGG 0.415782 2:+66447701 MsG0280010233.01.T01:CDS
AGAAGCGAAGGAGGAGAGAG+AGG 0.415874 2:+66447823 MsG0280010233.01.T01:CDS
TCATGGATATTATGGTGTCT+TGG 0.418203 2:+66451808 MsG0280010233.01.T01:three_prime_UTR
GAAACGGAAAATGAAGAAGA+AGG 0.431893 2:+66447926 MsG0280010233.01.T01:CDS
GCCAACCATGCGGTGAACTC+TGG 0.432000 2:-66449935 None:intergenic
CTCTGACTCCGAATCCGAAC+CGG 0.434327 2:-66447715 None:intergenic
TCGAGAAACGTTAACGGTAA+TGG 0.435120 2:+66447459 MsG0280010233.01.T01:CDS
GGAAGAGGAAGGAGAAGCGA+AGG 0.437488 2:+66447811 MsG0280010233.01.T01:CDS
TTGAAAACTGTTCGTTCCTT+AGG 0.440826 2:-66450985 None:intergenic
AGAGGAAGGAGAAGCGAAGG+AGG 0.446107 2:+66447814 MsG0280010233.01.T01:CDS
GGAGAGTGAAGGAGAGAGGA+AGG 0.448282 2:+66447785 MsG0280010233.01.T01:CDS
GATAGCTTTGAAGCGTGAAA+TGG 0.450247 2:+66451386 MsG0280010233.01.T01:CDS
TATGGAGCATCTGTCTAATT+GGG 0.451352 2:+66450361 MsG0280010233.01.T01:CDS
GTACAAGCTTGGCAACTTTG+AGG 0.458033 2:+66451573 MsG0280010233.01.T01:CDS
TGCGGTGAACTCTGGACGCT+TGG 0.462609 2:-66449927 None:intergenic
AGAGAAGAAGAGAAGGAAGA+AGG 0.462903 2:+66447875 MsG0280010233.01.T01:CDS
AGAGGGAGGAAGAGAAGAGA+AGG 0.464264 2:+66447841 MsG0280010233.01.T01:CDS
TGCTTACTACAGGCGTCAAA+TGG 0.465748 2:+66450927 MsG0280010233.01.T01:CDS
GAGAGAAAGAGAAGAAGAGA+AGG 0.467386 2:+66447868 MsG0280010233.01.T01:CDS
GCGAAGGAGGAGAGAGAGGG+AGG 0.470950 2:+66447827 MsG0280010233.01.T01:CDS
TGAATCCGAACGGTCTGGTT+CGG 0.471389 2:+66447743 MsG0280010233.01.T01:CDS
GAGGAAGGAGAGGAAGAGGA+AGG 0.472491 2:+66447800 MsG0280010233.01.T01:CDS
CAGTGATGATGAATCGGATT+CGG 0.475281 2:+66447689 MsG0280010233.01.T01:CDS
GAAGCGAAGGAGGAGAGAGA+GGG 0.475698 2:+66447824 MsG0280010233.01.T01:CDS
TTTGGAGATGCTCGCTCACT+TGG 0.478899 2:-66451971 None:intergenic
GCCGTCGTCTTTCTCTGAGC+TGG 0.479004 2:-66447502 None:intergenic
CAAAGTTGCCAAGCTTGTAC+TGG 0.483292 2:-66451570 None:intergenic
ATACAGCAGTGATGATGAAT+CGG 0.488450 2:+66447683 MsG0280010233.01.T01:CDS
ACGGCGTCGTTTATCGGAAT+CGG 0.494732 2:-66447637 None:intergenic
TGAAAGAGCAAGCACAACTC+AGG 0.501356 2:+66451533 MsG0280010233.01.T01:CDS
CTCCGTCGAAAAGAGATTCA+AGG 0.501886 2:+66447529 MsG0280010233.01.T01:CDS
TTGATAGCACACTGTAGAAA+AGG 0.502977 2:-66451897 None:intergenic
CTAATTTATGGGGAAAGTAT+GGG 0.505958 2:+66447982 MsG0280010233.01.T01:CDS
AAAATGTCGAGAAACGTTAA+CGG 0.506060 2:+66447453 MsG0280010233.01.T01:exon
GTGAAGGAGAGAGGAAGGAG+AGG 0.507055 2:+66447790 MsG0280010233.01.T01:CDS
TGAGCTACTATGCTTTCTAT+CGG 0.516491 2:-66447586 None:intergenic
AGGAGAAAGAAGAAGAGAGA+AGG 0.516908 2:+66447895 MsG0280010233.01.T01:CDS
GGAGTCGGAGTATTCGGGTT+CGG 0.516960 2:+66447764 MsG0280010233.01.T01:CDS
AGCGATGAATCCGAACGGTC+TGG 0.517575 2:+66447738 MsG0280010233.01.T01:CDS
GGGATATAATATGCTGTGGA+TGG 0.518454 2:+66451829 MsG0280010233.01.T01:three_prime_UTR
CGACTCCGAACCAGACCGTT+CGG 0.519381 2:-66447748 None:intergenic
AGGCCATATATCCTATGAAA+AGG 0.520025 2:+66452000 MsG0280010233.01.T01:three_prime_UTR
GGATATAATATGCTGTGGAT+GGG 0.524338 2:+66451830 MsG0280010233.01.T01:three_prime_UTR
AGCACAACTCAGGGAGGAGA+TGG 0.524634 2:+66451543 MsG0280010233.01.T01:CDS
CGTTAACGGTAATGGTGCTC+CGG 0.531901 2:+66447467 MsG0280010233.01.T01:CDS
TTATAAGAAGGTTCAGCCTA+AGG 0.534176 2:+66450969 MsG0280010233.01.T01:CDS
CGAGCATCTCCAAACTGTCC+AGG 0.536605 2:+66451980 MsG0280010233.01.T01:three_prime_UTR
TTGAAGCGTGAAATGGAAAG+TGG 0.543422 2:+66451393 MsG0280010233.01.T01:CDS
TCCAGAGTTCACCGCATGGT+TGG 0.557065 2:+66449934 MsG0280010233.01.T01:CDS
ACAGTCTTGATGCTTACTAC+AGG 0.557804 2:+66450917 MsG0280010233.01.T01:CDS
GATATAATATGCTGTGGATG+GGG 0.560278 2:+66451831 MsG0280010233.01.T01:three_prime_UTR
ATGGCTTACCAGTACAAGCT+TGG 0.568371 2:+66451562 MsG0280010233.01.T01:CDS
CTGCTGCTGCAATCCAGAGA+AGG 0.573865 2:+66451683 MsG0280010233.01.T01:CDS
ATGGTTGGCAGAAGTTAAGC+TGG 0.573991 2:+66449949 MsG0280010233.01.T01:CDS
TGCTGCAATCCAGAGAAGGT+TGG 0.578757 2:+66451687 MsG0280010233.01.T01:CDS
GTCGTCTTTCTCTGAGCTGG+TGG 0.580374 2:-66447499 None:intergenic
ATAGATGTGTTGCCTTGTGA+TGG 0.587765 2:+66451927 MsG0280010233.01.T01:three_prime_UTR
TGTGGATATGAATTAGGTGA+TGG 0.588430 2:+66451751 MsG0280010233.01.T01:three_prime_UTR
GAAAGAGCAAGCACAACTCA+GGG 0.590934 2:+66451534 MsG0280010233.01.T01:CDS
CTGTCTACACGGCAGCATCA+GGG 0.591136 2:-66451711 None:intergenic
TTCTGGTTACAGATTTATGG+AGG 0.597616 2:+66450687 MsG0280010233.01.T01:intron
CGAACGGTCTGGTTCGGAGT+CGG 0.599371 2:+66447749 MsG0280010233.01.T01:CDS
GTGGATATGAATTAGGTGAT+GGG 0.602212 2:+66451752 MsG0280010233.01.T01:three_prime_UTR
GTTCGGAGAGTGAAGGAGAG+AGG 0.618767 2:+66447781 MsG0280010233.01.T01:CDS
GTGTAGGACATAACTTATTG+TGG 0.628359 2:+66451733 MsG0280010233.01.T01:three_prime_UTR
TATTCGGGTTCGGAGAGTGA+AGG 0.634912 2:+66447774 MsG0280010233.01.T01:CDS
TCAATGACGAAGAACAGCGC+AGG 0.636477 2:+66451004 MsG0280010233.01.T01:CDS
ACAGTATGCACTATGTTCTG+AGG 0.640263 2:-66452192 None:intergenic
CAGTCCAAGTAAGATGCACA+AGG 0.642881 2:-66452026 None:intergenic
TTATTAGAGAAACTGATATG+TGG 0.644513 2:+66448006 MsG0280010233.01.T01:CDS
ATTCCGATAAACGACGCCGT+AGG 0.645227 2:+66447640 MsG0280010233.01.T01:CDS
TATGTCCTACACTGTCTACA+CGG 0.653486 2:-66451722 None:intergenic
GGTGCTGTGACTAATTTATG+GGG 0.653975 2:+66447972 MsG0280010233.01.T01:CDS
TCTTGGGATATAATATGCTG+TGG 0.656062 2:+66451825 MsG0280010233.01.T01:three_prime_UTR
ACCAGCTCAGAGAAAGACGA+CGG 0.656673 2:+66447501 MsG0280010233.01.T01:CDS
AGCGTCCAGAGTTCACCGCA+TGG 0.660448 2:+66449930 MsG0280010233.01.T01:CDS
GCGTGAAATGGAAAGTGGAA+TGG 0.661059 2:+66451398 MsG0280010233.01.T01:CDS
AAGACAAAACTTCCATCACA+AGG 0.671610 2:-66451939 None:intergenic
CTGTAGAAAAGGCGTCAATG+TGG 0.671743 2:-66451886 None:intergenic
TGGATATGAATTAGGTGATG+GGG 0.674471 2:+66451753 MsG0280010233.01.T01:three_prime_UTR
CAGAGAGCGATGAATCCGAA+CGG 0.693318 2:+66447733 MsG0280010233.01.T01:CDS
AGAGCAAGCACAACTCAGGG+AGG 0.714698 2:+66451537 MsG0280010233.01.T01:CDS
CTTAACTTCTGCCAACCATG+CGG 0.728245 2:-66449945 None:intergenic
ATGAGTTTGTCATAATGACA+TGG 0.740021 2:-66451784 None:intergenic
TGCTGCCGTGTAGACAGTGT+AGG 0.744540 2:+66451717 MsG0280010233.01.T01:exon
GTAGGAAGAGAAAATCACGT+CGG 0.815812 2:+66447658 MsG0280010233.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAAAAGAAAATATAATAT+AGG - Chr2:66451228-66451247 None:intergenic 10.0%
!! AAAATACAGCAAATTAAAAT+TGG - Chr2:66450331-66450350 None:intergenic 15.0%
!! AAAATGAAAATTTCACATAA+AGG - Chr2:66452129-66452148 None:intergenic 15.0%
!! ATCATTATTGTATATTCATT+TGG + Chr2:66450858-66450877 MsG0280010233.01.T01:intron 15.0%
!! TATGTTTATATTTACTCTTA+AGG + Chr2:66450517-66450536 MsG0280010233.01.T01:intron 15.0%
!! TCATTATTGTATATTCATTT+GGG + Chr2:66450859-66450878 MsG0280010233.01.T01:intron 15.0%
!!! AAAATGCTCATATTTTAATT+TGG - Chr2:66452231-66452250 None:intergenic 15.0%
!!! TCATATGTTTAATTTTCTTA+TGG + Chr2:66449664-66449683 MsG0280010233.01.T01:intron 15.0%
!!! TTTTGTTAATTAATGACAAA+AGG + Chr2:66451465-66451484 MsG0280010233.01.T01:intron 15.0%
!! AAAATTAAGTAAAAGAGAGA+AGG + Chr2:66450436-66450455 MsG0280010233.01.T01:intron 20.0%
!! AAAGGAAAAGAAAAAAAAAG+TGG + Chr2:66450463-66450482 MsG0280010233.01.T01:intron 20.0%
!! AAATTCAAATTGCATAAAAG+TGG - Chr2:66451439-66451458 None:intergenic 20.0%
!! AGGATAACTTATATAATGTA+GGG + Chr2:66449239-66449258 MsG0280010233.01.T01:intron 20.0%
!! ATTGAATTATCAGAGTATAA+TGG + Chr2:66448085-66448104 MsG0280010233.01.T01:intron 20.0%
!! GAATAATAATAACTAGTAAC+AGG + Chr2:66449008-66449027 MsG0280010233.01.T01:intron 20.0%
!! TAACTAATGTAATCTTAACT+TGG + Chr2:66451048-66451067 MsG0280010233.01.T01:intron 20.0%
!! TATTCCTATTCATAAAAATG+AGG - Chr2:66450783-66450802 None:intergenic 20.0%
!!! AGAAGTATAAGTAATAACTT+GGG + Chr2:66448751-66448770 MsG0280010233.01.T01:intron 20.0%
!!! AGTTGATATAGTTTAAACAT+AGG + Chr2:66449292-66449311 MsG0280010233.01.T01:intron 20.0%
!!! TGTATTTTAACAGGTAAATA+TGG + Chr2:66450343-66450362 MsG0280010233.01.T01:intron 20.0%
!!! TTAATTTGCTGTATTTTAAC+AGG + Chr2:66450334-66450353 MsG0280010233.01.T01:intron 20.0%
!!! TTTAGCAAAATTTTATATCG+AGG + Chr2:66449368-66449387 MsG0280010233.01.T01:intron 20.0%
! AAAAAGTTTGCAGCAAATTT+AGG - Chr2:66451652-66451671 None:intergenic 25.0%
! AACTCATTTCATGGATATTA+TGG + Chr2:66451800-66451819 MsG0280010233.01.T01:three_prime_UTR 25.0%
! AATATTAACAGCATTCAGAT+TGG + Chr2:66448287-66448306 MsG0280010233.01.T01:intron 25.0%
! AATGGAAAAAGAGATGAAAA+AGG + Chr2:66450945-66450964 MsG0280010233.01.T01:CDS 25.0%
! ACTAGAATGCCAAAATATAA+AGG - Chr2:66450276-66450295 None:intergenic 25.0%
! ACTTATTGTGGATATGAATT+AGG + Chr2:66451745-66451764 MsG0280010233.01.T01:three_prime_UTR 25.0%
! AGTATAATGGTTGAATTATG+TGG + Chr2:66448098-66448117 MsG0280010233.01.T01:intron 25.0%
! ATAGTGTATTATGAAGTTCT+TGG + Chr2:66448127-66448146 MsG0280010233.01.T01:intron 25.0%
! ATCAAGTCAACATGTTAAAA+TGG - Chr2:66449637-66449656 None:intergenic 25.0%
! ATGGAAAAAGAGATGAAAAA+GGG + Chr2:66450946-66450965 MsG0280010233.01.T01:CDS 25.0%
! ATTATGACAAACTCATTTCA+TGG + Chr2:66451791-66451810 MsG0280010233.01.T01:three_prime_UTR 25.0%
! CAAATGGTTTAATGTTTATG+TGG + Chr2:66450886-66450905 MsG0280010233.01.T01:intron 25.0%
! CAGGATAACTTATATAATGT+AGG + Chr2:66449238-66449257 MsG0280010233.01.T01:intron 25.0%
! CATTAATATCCTTTGAACTA+GGG + Chr2:66449861-66449880 MsG0280010233.01.T01:intron 25.0%
! CTAGAATGCCAAAATATAAA+GGG - Chr2:66450275-66450294 None:intergenic 25.0%
! GCATTTGAATCATGTAATAT+TGG + Chr2:66448981-66449000 MsG0280010233.01.T01:intron 25.0%
! GCTGTAAAGAATCTTTATTA+TGG + Chr2:66449116-66449135 MsG0280010233.01.T01:intron 25.0%
! GTTAATTTCTCTCTAATTTC+TGG + Chr2:66450670-66450689 MsG0280010233.01.T01:intron 25.0%
! TAAACAATAGTAAAGCATGT+AGG - Chr2:66451128-66451147 None:intergenic 25.0%
! TATGGTTTAGAAAAAAAGTG+AGG + Chr2:66452169-66452188 MsG0280010233.01.T01:three_prime_UTR 25.0%
! TGTATGTACTGAAATATCAT+GGG + Chr2:66448189-66448208 MsG0280010233.01.T01:intron 25.0%
! TTATTAGAGAAACTGATATG+TGG + Chr2:66448006-66448025 MsG0280010233.01.T01:CDS 25.0%
! TTATTCACTTATTCATCACT+AGG + Chr2:66450610-66450629 MsG0280010233.01.T01:intron 25.0%
! TTGTATGTACTGAAATATCA+TGG + Chr2:66448188-66448207 MsG0280010233.01.T01:intron 25.0%
! TTGTTAGTGTATAAGATTGT+AGG + Chr2:66448239-66448258 MsG0280010233.01.T01:intron 25.0%
! TTTAAGTACCTACATTCTAA+AGG + Chr2:66449765-66449784 MsG0280010233.01.T01:intron 25.0%
!! AAATCATCAGCCATTATTTT+TGG + Chr2:66449800-66449819 MsG0280010233.01.T01:intron 25.0%
!! ATATAGGTAGACTTTTACAA+TGG - Chr2:66451212-66451231 None:intergenic 25.0%
!! ATCTTATTTCCAGTATATGT+CGG + Chr2:66450145-66450164 MsG0280010233.01.T01:intron 25.0%
!! ATCTTTCACCCTTTATATTT+TGG + Chr2:66450264-66450283 MsG0280010233.01.T01:intron 25.0%
!! ATTGCAAATTGTTGTTGATA+TGG - Chr2:66449152-66449171 None:intergenic 25.0%
!! GAGAAGTATAAGTAATAACT+TGG + Chr2:66448750-66448769 MsG0280010233.01.T01:intron 25.0%
!! GTATGTGAATCATTTAAGAT+TGG + Chr2:66448728-66448747 MsG0280010233.01.T01:intron 25.0%
!! TTTTTGTGCAATAATTTTGC+AGG + Chr2:66451501-66451520 MsG0280010233.01.T01:intron 25.0%
!!! AACATGTTGACTTGATATTA+TGG + Chr2:66449641-66449660 MsG0280010233.01.T01:intron 25.0%
!!! AATTTCTGGTTACAGATTTA+TGG + Chr2:66450684-66450703 MsG0280010233.01.T01:intron 25.0%
!!! AATTTTTTTCTTTGAGTTGC+AGG - Chr2:66450422-66450441 None:intergenic 25.0%
!!! ATCTTAACTTGGTTTTCTTT+TGG + Chr2:66451059-66451078 MsG0280010233.01.T01:intron 25.0%
!!! CTTTCATGATCATTTTTCAA+TGG + Chr2:66451310-66451329 MsG0280010233.01.T01:intron 25.0%
!!! GTAGAATTTGTTATTGTAGA+AGG + Chr2:66448884-66448903 MsG0280010233.01.T01:intron 25.0%
!!! TGGTTAATGTTTTGTTGATT+TGG + Chr2:66448147-66448166 MsG0280010233.01.T01:intron 25.0%
!!! TTGTCCTCATTTTTATGAAT+AGG + Chr2:66450776-66450795 MsG0280010233.01.T01:intron 25.0%
!!! TTTCATTTTTTGTCCTGTTT+TGG - Chr2:66449056-66449075 None:intergenic 25.0%
AAAATGTCGAGAAACGTTAA+CGG + Chr2:66447453-66447472 MsG0280010233.01.T01:exon 30.0%
AATAATGTCTTGGAAGATGA+AGG + Chr2:66449199-66449218 MsG0280010233.01.T01:intron 30.0%
AATAGGTGATTGGATATTGA+AGG + Chr2:66448805-66448824 MsG0280010233.01.T01:intron 30.0%
AATGAAGAAGAAGGAGAAAA+AGG + Chr2:66447935-66447954 MsG0280010233.01.T01:CDS 30.0%
ACAATAGATTTGCATTCATC+TGG - Chr2:66448866-66448885 None:intergenic 30.0%
ACTAATTTATGGGGAAAGTA+TGG + Chr2:66447981-66448000 MsG0280010233.01.T01:CDS 30.0%
AGAGAAGGAAAAAAGAGAAA+CGG + Chr2:66447910-66447929 MsG0280010233.01.T01:CDS 30.0%
AGTATGTGATTGGATATTGA+AGG + Chr2:66449461-66449480 MsG0280010233.01.T01:intron 30.0%
ATAGGTGATTGGATATTGAA+GGG + Chr2:66448806-66448825 MsG0280010233.01.T01:intron 30.0%
ATGAGTTTGTCATAATGACA+TGG - Chr2:66451787-66451806 None:intergenic 30.0%
ATTTGCATGTCATGTTTACA+TGG + Chr2:66450298-66450317 MsG0280010233.01.T01:intron 30.0%
CTAACTCATGATTCAGTTTA+AGG - Chr2:66448483-66448502 None:intergenic 30.0%
CTTCCAAGACATTATTAAAC+TGG - Chr2:66449195-66449214 None:intergenic 30.0%
GACATCCTAATAATATAGAG+GGG + Chr2:66448828-66448847 MsG0280010233.01.T01:intron 30.0%
GATGAAAAAGGGTTATAAGA+AGG + Chr2:66450957-66450976 MsG0280010233.01.T01:CDS 30.0%
GCATTAATATCCTTTGAACT+AGG + Chr2:66449860-66449879 MsG0280010233.01.T01:intron 30.0%
GGACATCCTAATAATATAGA+GGG + Chr2:66448827-66448846 MsG0280010233.01.T01:intron 30.0%
GTTATTGTTATGCTTTGATC+CGG + Chr2:66448309-66448328 MsG0280010233.01.T01:intron 30.0%
GTTCCAGTTTAATAATGTCT+TGG + Chr2:66449189-66449208 MsG0280010233.01.T01:intron 30.0%
TAATCTGTGTGAAGAAAACA+AGG - Chr2:66450122-66450141 None:intergenic 30.0%
TATAAGTAATAACTTGGGAC+AGG + Chr2:66448756-66448775 MsG0280010233.01.T01:intron 30.0%
TATTATGCACTTCTATTGAG+AGG - Chr2:66450245-66450264 None:intergenic 30.0%
TCAATATCCAATCACCTATT+TGG - Chr2:66448805-66448824 None:intergenic 30.0%
TTAAACTGGAACCTATATTC+AGG - Chr2:66449181-66449200 None:intergenic 30.0%
TTAAGTAAAAGAGAGAAGGA+TGG + Chr2:66450440-66450459 MsG0280010233.01.T01:intron 30.0%
TTGATTGAAAGATGTCAGAT+TGG + Chr2:66448264-66448283 MsG0280010233.01.T01:intron 30.0%
TTTGCAAAAACTCAAACTAG+TGG + Chr2:66450060-66450079 MsG0280010233.01.T01:intron 30.0%
! CTAATTTATGGGGAAAGTAT+GGG + Chr2:66447982-66448001 MsG0280010233.01.T01:CDS 30.0%
! GATATGTGGTAAGAATTTTC+TGG + Chr2:66448020-66448039 MsG0280010233.01.T01:intron 30.0%
! GTTTTTGCAAAAATGAACAG+AGG - Chr2:66450051-66450070 None:intergenic 30.0%
! TGCAAACTTTTTACCACTAT+AGG + Chr2:66451660-66451679 MsG0280010233.01.T01:intron 30.0%
! TGCATATTTTTCTTGCCTAT+TGG + Chr2:66450205-66450224 MsG0280010233.01.T01:intron 30.0%
!! TATTCATTTGGGTTGACAAA+TGG + Chr2:66450870-66450889 MsG0280010233.01.T01:intron 30.0%
!! TCAGTTTGTTAGTATGTGAT+TGG + Chr2:66449451-66449470 MsG0280010233.01.T01:intron 30.0%
!! TGGAATGTGAAAGTTTTTAG+TGG + Chr2:66448214-66448233 MsG0280010233.01.T01:intron 30.0%
AAGACAAAACTTCCATCACA+AGG - Chr2:66451942-66451961 None:intergenic 35.0%
AATAGGGGTAGAGTAAGTTT+GGG - Chr2:66451097-66451116 None:intergenic 35.0%
AGGCCATATATCCTATGAAA+AGG + Chr2:66452000-66452019 MsG0280010233.01.T01:three_prime_UTR 35.0%
AGTGACGTTATGAATATTGC+AGG + Chr2:66449903-66449922 MsG0280010233.01.T01:intron 35.0%
AGTTAGCGATGATTTCTTCT+AGG + Chr2:66448497-66448516 MsG0280010233.01.T01:intron 35.0%
ATACCAAAACCCTAGTTCAA+AGG - Chr2:66449873-66449892 None:intergenic 35.0%
ATGTAGGTAGCTAACAATAG+GGG - Chr2:66451112-66451131 None:intergenic 35.0%
CATGGATATTATGGTGTCTT+GGG + Chr2:66451809-66451828 MsG0280010233.01.T01:three_prime_UTR 35.0%
CATGTAGGTAGCTAACAATA+GGG - Chr2:66451113-66451132 None:intergenic 35.0%
CTAATAATATAGAGGGGTCT+AGG + Chr2:66448834-66448853 MsG0280010233.01.T01:intron 35.0%
CTAGACCCCTCTATATTATT+AGG - Chr2:66448836-66448855 None:intergenic 35.0%
GAAACGGAAAATGAAGAAGA+AGG + Chr2:66447926-66447945 MsG0280010233.01.T01:CDS 35.0%
GAACAACCTAATGTTATAGC+GGG + Chr2:66449483-66449502 MsG0280010233.01.T01:intron 35.0%
GAGACTTAAGCTAAAAACGA+AGG - Chr2:66451628-66451647 None:intergenic 35.0%
GATATAATATGCTGTGGATG+GGG + Chr2:66451831-66451850 MsG0280010233.01.T01:three_prime_UTR 35.0%
GCAAACTCAGCCAAAAATAA+TGG - Chr2:66449813-66449832 None:intergenic 35.0%
GCAATACACATGAATTTCTG+AGG - Chr2:66449272-66449291 None:intergenic 35.0%
GCAATTTCTCTCCTGAATAT+AGG + Chr2:66449167-66449186 MsG0280010233.01.T01:intron 35.0%
GCTCTAGCAGAAGTTTAATT+TGG + Chr2:66450745-66450764 MsG0280010233.01.T01:intron 35.0%
GGAACAACCTAATGTTATAG+CGG + Chr2:66449482-66449501 MsG0280010233.01.T01:intron 35.0%
GGATATAATATGCTGTGGAT+GGG + Chr2:66451830-66451849 MsG0280010233.01.T01:three_prime_UTR 35.0%
GGGACATCCTAATAATATAG+AGG + Chr2:66448826-66448845 MsG0280010233.01.T01:intron 35.0%
GTACTGAAATATCATGGGAT+TGG + Chr2:66448194-66448213 MsG0280010233.01.T01:intron 35.0%
GTGGATATGAATTAGGTGAT+GGG + Chr2:66451752-66451771 MsG0280010233.01.T01:three_prime_UTR 35.0%
GTGTAGGACATAACTTATTG+TGG + Chr2:66451733-66451752 MsG0280010233.01.T01:three_prime_UTR 35.0%
GTTAGCGATGATTTCTTCTA+GGG + Chr2:66448498-66448517 MsG0280010233.01.T01:intron 35.0%
GTTATGTGATCATCATCTCA+CGG + Chr2:66448576-66448595 MsG0280010233.01.T01:intron 35.0%
GTTTAGAAGCTAAAGACCTA+CGG + Chr2:66449405-66449424 MsG0280010233.01.T01:intron 35.0%
TAAAAGAGAGAAGGATGGAA+AGG + Chr2:66450445-66450464 MsG0280010233.01.T01:intron 35.0%
TCAATGTTACCGACATATAC+TGG - Chr2:66450157-66450176 None:intergenic 35.0%
TCATGGATATTATGGTGTCT+TGG + Chr2:66451808-66451827 MsG0280010233.01.T01:three_prime_UTR 35.0%
TCTTGGGATATAATATGCTG+TGG + Chr2:66451825-66451844 MsG0280010233.01.T01:three_prime_UTR 35.0%
TGAATAATCAGCGAGTCAAT+AGG - Chr2:66450597-66450616 None:intergenic 35.0%
TGAGCTACTATGCTTTCTAT+CGG - Chr2:66447589-66447608 None:intergenic 35.0%
TGGATATGAATTAGGTGATG+GGG + Chr2:66451753-66451772 MsG0280010233.01.T01:three_prime_UTR 35.0%
TGGCTTCTTTATAACATCCT+GGG + Chr2:66450080-66450099 MsG0280010233.01.T01:intron 35.0%
TGGTTTAATGTTTATGTGGC+AGG + Chr2:66450890-66450909 MsG0280010233.01.T01:intron 35.0%
TGTGGATATGAATTAGGTGA+TGG + Chr2:66451751-66451770 MsG0280010233.01.T01:three_prime_UTR 35.0%
TTAAATGCATGTTCCAGACT+GGG - Chr2:66448702-66448721 None:intergenic 35.0%
TTACTTGGACTGATCGAAAT+TGG + Chr2:66452037-66452056 MsG0280010233.01.T01:three_prime_UTR 35.0%
TTATAAGAAGGTTCAGCCTA+AGG + Chr2:66450969-66450988 MsG0280010233.01.T01:CDS 35.0%
TTCATAACGTCACTCAAACA+AGG - Chr2:66449897-66449916 None:intergenic 35.0%
TTGAAAACTGTTCGTTCCTT+AGG - Chr2:66450988-66451007 None:intergenic 35.0%
TTTAGAAGCTAAAGACCTAC+GGG + Chr2:66449406-66449425 MsG0280010233.01.T01:intron 35.0%
TTTGCTAAACTGTAAGTCAC+TGG - Chr2:66449357-66449376 None:intergenic 35.0%
! AGGTGCTGTGACTAATTTAT+GGG + Chr2:66447971-66447990 MsG0280010233.01.T01:CDS 35.0%
! ATACAGCAGTGATGATGAAT+CGG + Chr2:66447683-66447702 MsG0280010233.01.T01:CDS 35.0%
! ATATGGAGCATCTGTCTAAT+TGG + Chr2:66450360-66450379 MsG0280010233.01.T01:CDS 35.0%
! ATGATGCTTTTGCATGTCTA+TGG + Chr2:66452151-66452170 MsG0280010233.01.T01:three_prime_UTR 35.0%
! CTGCCTTTTCATAGGATATA+TGG - Chr2:66452006-66452025 None:intergenic 35.0%
! TAGGTCTTTAGCTTCTAAAC+AGG - Chr2:66449405-66449424 None:intergenic 35.0%
! TATCCTTTGAACTAGGGTTT+TGG + Chr2:66449867-66449886 MsG0280010233.01.T01:intron 35.0%
! TATGGAGCATCTGTCTAATT+GGG + Chr2:66450361-66450380 MsG0280010233.01.T01:CDS 35.0%
! TTCCTTGAATCTCTTTTCGA+CGG - Chr2:66447534-66447553 None:intergenic 35.0%
! TTCTGGTTACAGATTTATGG+AGG + Chr2:66450687-66450706 MsG0280010233.01.T01:intron 35.0%
! TTCTTTTACTGCACTTCAAG+TGG + Chr2:66451238-66451257 MsG0280010233.01.T01:intron 35.0%
! TTGATAGCACACTGTAGAAA+AGG - Chr2:66451900-66451919 None:intergenic 35.0%
! TTTTCATAGGATATATGGCC+TGG - Chr2:66452001-66452020 None:intergenic 35.0%
!! AAGGTGCTGTGACTAATTTA+TGG + Chr2:66447970-66447989 MsG0280010233.01.T01:CDS 35.0%
!! ATCGGTTTGTGTGTCTATAT+CGG - Chr2:66447571-66447590 None:intergenic 35.0%
!! GGTTTTGTCTATTGCAATAG+AGG + Chr2:66451852-66451871 MsG0280010233.01.T01:three_prime_UTR 35.0%
!! TTCTGCTAGAGCTTACTTTT+TGG - Chr2:66450737-66450756 None:intergenic 35.0%
!! TTCTTCTAGGGTTTCTCATA+TGG + Chr2:66448510-66448529 MsG0280010233.01.T01:intron 35.0%
!! TTTCTAAGACTACAGTCACA+TGG + Chr2:66449574-66449593 MsG0280010233.01.T01:intron 35.0%
!! TTTCTTTGAGTTGCAGGATT+AGG - Chr2:66450416-66450435 None:intergenic 35.0%
!!! CTAGAGCTTACTTTTTGGAA+GGG - Chr2:66450732-66450751 None:intergenic 35.0%
AAAAAGGAGAGAGGGAAGAA+AGG + Chr2:66447951-66447970 MsG0280010233.01.T01:CDS 40.0%
AAGAAGGAGAAAAAGGAGAG+AGG + Chr2:66447942-66447961 MsG0280010233.01.T01:CDS 40.0%
AAGAGAGAGCTGTTCATCTA+GGG - Chr2:66448539-66448558 None:intergenic 40.0%
AATATAGAGGGGTCTAGGAA+GGG + Chr2:66448839-66448858 MsG0280010233.01.T01:intron 40.0%
ACAGTATGCACTATGTTCTG+AGG - Chr2:66452195-66452214 None:intergenic 40.0%
ACAGTCTTGATGCTTACTAC+AGG + Chr2:66450917-66450936 MsG0280010233.01.T01:CDS 40.0%
ACCAATGAAACGGATCAATG+CGG - Chr2:66448666-66448685 None:intergenic 40.0%
AGAAGGAGAAAAAGGAGAGA+GGG + Chr2:66447943-66447962 MsG0280010233.01.T01:CDS 40.0%
AGAGAAGAAGAGAAGGAAGA+AGG + Chr2:66447875-66447894 MsG0280010233.01.T01:CDS 40.0%
AGGAGAAAGAAGAAGAGAGA+AGG + Chr2:66447895-66447914 MsG0280010233.01.T01:CDS 40.0%
ATAGATGTGTTGCCTTGTGA+TGG + Chr2:66451927-66451946 MsG0280010233.01.T01:three_prime_UTR 40.0%
ATCCACTGTAGACATATTGC+AGG + Chr2:66449522-66449541 MsG0280010233.01.T01:intron 40.0%
ATGCGGACCATGATATATCA+TGG - Chr2:66448649-66448668 None:intergenic 40.0%
CAATAGGGGTAGAGTAAGTT+TGG - Chr2:66451098-66451117 None:intergenic 40.0%
CATTGATCCGTTTCATTGGT+GGG + Chr2:66448666-66448685 MsG0280010233.01.T01:intron 40.0%
CCTCTTGCAAATGCAAACTA+AGG - Chr2:66449551-66449570 None:intergenic 40.0%
CTCAGGATCAAGTAAGTGAT+TGG + Chr2:66448420-66448439 MsG0280010233.01.T01:intron 40.0%
CTTTATAACATCCTGGGACT+GGG + Chr2:66450086-66450105 MsG0280010233.01.T01:intron 40.0%
GAAGAGTTGACAGAGTGAAA+AGG - Chr2:66451187-66451206 None:intergenic 40.0%
GACAAGAAATGCAGTCCAAT+AGG - Chr2:66450223-66450242 None:intergenic 40.0%
GAGAGAAAGAGAAGAAGAGA+AGG + Chr2:66447868-66447887 MsG0280010233.01.T01:CDS 40.0%
GCAAGTACGTGAAAAACAGA+AGG + Chr2:66451353-66451372 MsG0280010233.01.T01:CDS 40.0%
GCATGTAGGTAGCTAACAAT+AGG - Chr2:66451114-66451133 None:intergenic 40.0%
GGGATATAATATGCTGTGGA+TGG + Chr2:66451829-66451848 MsG0280010233.01.T01:three_prime_UTR 40.0%
GTAGGAAGAGAAAATCACGT+CGG + Chr2:66447658-66447677 MsG0280010233.01.T01:CDS 40.0%
GTGACATCCAAATAGGTGAT+TGG + Chr2:66448795-66448814 MsG0280010233.01.T01:intron 40.0%
GTGGCTTCTTTATAACATCC+TGG + Chr2:66450079-66450098 MsG0280010233.01.T01:intron 40.0%
GTTAAATGCATGTTCCAGAC+TGG - Chr2:66448703-66448722 None:intergenic 40.0%
TAAGAGAGAGCTGTTCATCT+AGG - Chr2:66448540-66448559 None:intergenic 40.0%
TAATATAGAGGGGTCTAGGA+AGG + Chr2:66448838-66448857 MsG0280010233.01.T01:intron 40.0%
TATGTCCTACACTGTCTACA+CGG - Chr2:66451725-66451744 None:intergenic 40.0%
TCGAGAAACGTTAACGGTAA+TGG + Chr2:66447459-66447478 MsG0280010233.01.T01:CDS 40.0%
TCTTTACAGCATGCTGATAG+TGG - Chr2:66449106-66449125 None:intergenic 40.0%
TCTTTATAACATCCTGGGAC+TGG + Chr2:66450085-66450104 MsG0280010233.01.T01:intron 40.0%
TGTTCACTTGACACCAAAAC+AGG + Chr2:66449040-66449059 MsG0280010233.01.T01:intron 40.0%
TGTTCTCGTGACATCCAAAT+AGG + Chr2:66448788-66448807 MsG0280010233.01.T01:intron 40.0%
TTGAAGCGTGAAATGGAAAG+TGG + Chr2:66451393-66451412 MsG0280010233.01.T01:CDS 40.0%
TTGCAACATTTCTTGTCTGC+AGG - Chr2:66451337-66451356 None:intergenic 40.0%
! ATGAGCATCCTTTTCTCTTG+TGG - Chr2:66450545-66450564 None:intergenic 40.0%
! CAGTGATGATGAATCGGATT+CGG + Chr2:66447689-66447708 MsG0280010233.01.T01:CDS 40.0%
! GACGTGATTTTCTCTTCCTA+CGG - Chr2:66447659-66447678 None:intergenic 40.0%
! GGTGCTGTGACTAATTTATG+GGG + Chr2:66447972-66447991 MsG0280010233.01.T01:CDS 40.0%
! TTAAGGTGCCACAAGAGAAA+AGG + Chr2:66450534-66450553 MsG0280010233.01.T01:intron 40.0%
! TTCCTCTTCCTTTTTCTGTG+TGG + Chr2:66450024-66450043 MsG0280010233.01.T01:intron 40.0%
!! CCTTAGTTTGCATTTGCAAG+AGG + Chr2:66449548-66449567 MsG0280010233.01.T01:intron 40.0%
!! CTAATGTTATAGCGGGTCTA+GGG + Chr2:66449490-66449509 MsG0280010233.01.T01:intron 40.0%
!! GATAGCTTTGAAGCGTGAAA+TGG + Chr2:66451386-66451405 MsG0280010233.01.T01:CDS 40.0%
!!! GCTAGAGCTTACTTTTTGGA+AGG - Chr2:66450733-66450752 None:intergenic 40.0%
ACAGAGGACCACACAGAAAA+AGG - Chr2:66450035-66450054 None:intergenic 45.0%
AGCCTGCAATATGTCTACAG+TGG - Chr2:66449527-66449546 None:intergenic 45.0%
AGGTAGTTGTTGACACAAGC+AGG + Chr2:66449219-66449238 MsG0280010233.01.T01:intron 45.0%
ATATAGAGGGGTCTAGGAAG+GGG + Chr2:66448840-66448859 MsG0280010233.01.T01:intron 45.0%
ATGGCTTACCAGTACAAGCT+TGG + Chr2:66451562-66451581 MsG0280010233.01.T01:CDS 45.0%
ATGGTTGGCAGAAGTTAAGC+TGG + Chr2:66449949-66449968 MsG0280010233.01.T01:CDS 45.0%
CAAAGTTGCCAAGCTTGTAC+TGG - Chr2:66451573-66451592 None:intergenic 45.0%
CAGTCCAAGTAAGATGCACA+AGG - Chr2:66452029-66452048 None:intergenic 45.0%
CCTAGACCCGCTATAACATT+AGG - Chr2:66449492-66449511 None:intergenic 45.0%
CTCCGTCGAAAAGAGATTCA+AGG + Chr2:66447529-66447548 MsG0280010233.01.T01:CDS 45.0%
CTTAACTTCTGCCAACCATG+CGG - Chr2:66449948-66449967 None:intergenic 45.0%
GAAAGAGCAAGCACAACTCA+GGG + Chr2:66451534-66451553 MsG0280010233.01.T01:CDS 45.0%
GAATATGCACCAGCTGTTGA+TGG + Chr2:66449314-66449333 MsG0280010233.01.T01:intron 45.0%
GACCACACAGAAAAAGGAAG+AGG - Chr2:66450029-66450048 None:intergenic 45.0%
GATATATGGCCTGGACAGTT+TGG - Chr2:66451992-66452011 None:intergenic 45.0%
GATGAATCGGATTCGGATTC+CGG + Chr2:66447696-66447715 MsG0280010233.01.T01:CDS 45.0%
GCGAGTCAATAGGTCAGTTA+AGG - Chr2:66450587-66450606 None:intergenic 45.0%
GCGTGAAATGGAAAGTGGAA+TGG + Chr2:66451398-66451417 MsG0280010233.01.T01:CDS 45.0%
GGCGTCTCCATGATATATCA+TGG + Chr2:66448639-66448658 MsG0280010233.01.T01:intron 45.0%
GTACAAGCTTGGCAACTTTG+AGG + Chr2:66451573-66451592 MsG0280010233.01.T01:CDS 45.0%
GTGTACTTGCAAACACTCTC+AGG + Chr2:66448403-66448422 MsG0280010233.01.T01:intron 45.0%
TCGCAGAACAAGGATGTACA+CGG - Chr2:66450809-66450828 None:intergenic 45.0%
TGAAAGAGCAAGCACAACTC+AGG + Chr2:66451533-66451552 MsG0280010233.01.T01:CDS 45.0%
TGCAACAAACCATCAACAGC+TGG - Chr2:66449326-66449345 None:intergenic 45.0%
TGCTTACTACAGGCGTCAAA+TGG + Chr2:66450927-66450946 MsG0280010233.01.T01:CDS 45.0%
TGTTATGCTTTGATCCGGAG+TGG + Chr2:66448314-66448333 MsG0280010233.01.T01:intron 45.0%
! AGTGATTGGTCGAGAGTGTA+AGG + Chr2:66448434-66448453 MsG0280010233.01.T01:intron 45.0%
! GCATTGATCCGTTTCATTGG+TGG + Chr2:66448665-66448684 MsG0280010233.01.T01:intron 45.0%
! GTCGAGAGTGTAAGGTTGTA+GGG + Chr2:66448442-66448461 MsG0280010233.01.T01:intron 45.0%
! TCCGCATTGATCCGTTTCAT+TGG + Chr2:66448662-66448681 MsG0280010233.01.T01:intron 45.0%
!! CAGCACGACCTTTAGAATGT+AGG - Chr2:66449776-66449795 None:intergenic 45.0%
!! CCTAATGTTATAGCGGGTCT+AGG + Chr2:66449489-66449508 MsG0280010233.01.T01:intron 45.0%
!! CTGTAGAAAAGGCGTCAATG+TGG - Chr2:66451889-66451908 None:intergenic 45.0%
ACCAGCTCAGAGAAAGACGA+CGG + Chr2:66447501-66447520 MsG0280010233.01.T01:CDS 50.0%
ACGGCGTCGTTTATCGGAAT+CGG - Chr2:66447640-66447659 None:intergenic 50.0%
AGAGGGAGGAAGAGAAGAGA+AGG + Chr2:66447841-66447860 MsG0280010233.01.T01:CDS 50.0%
AGTCACATGGAAGCAACTCC+AGG + Chr2:66449587-66449606 MsG0280010233.01.T01:intron 50.0%
AGTCCAGCCCACCAATGAAA+CGG - Chr2:66448676-66448695 None:intergenic 50.0%
AGTCTTGACGCAACAGTTGG+AGG - Chr2:66449613-66449632 None:intergenic 50.0%
ATCGGATTCGGATTCCGGTT+CGG + Chr2:66447701-66447720 MsG0280010233.01.T01:CDS 50.0%
ATTCCGATAAACGACGCCGT+AGG + Chr2:66447640-66447659 MsG0280010233.01.T01:CDS 50.0%
ATTGCAGCAGCAGCCTATAG+TGG - Chr2:66451676-66451695 None:intergenic 50.0%
CAGAGAGCGATGAATCCGAA+CGG + Chr2:66447733-66447752 MsG0280010233.01.T01:CDS 50.0%
CATCTCATCGTCGCAGAACA+AGG - Chr2:66450819-66450838 None:intergenic 50.0%
CCGTCAATCTAAGTCCACTC+CGG - Chr2:66448331-66448350 None:intergenic 50.0%
CTTCCTACGGCGTCGTTTAT+CGG - Chr2:66447646-66447665 None:intergenic 50.0%
GGAAGTCTTGACGCAACAGT+TGG - Chr2:66449616-66449635 None:intergenic 50.0%
TAGATTGACGGCCTGAGAGA+CGG + Chr2:66448340-66448359 MsG0280010233.01.T01:intron 50.0%
TATAACATCCTGGGACTGGG+AGG + Chr2:66450089-66450108 MsG0280010233.01.T01:intron 50.0%
TCAATGACGAAGAACAGCGC+AGG + Chr2:66451004-66451023 MsG0280010233.01.T01:CDS 50.0%
TGAATCCGAACGGTCTGGTT+CGG + Chr2:66447743-66447762 MsG0280010233.01.T01:CDS 50.0%
TGCTGCAATCCAGAGAAGGT+TGG + Chr2:66451687-66451706 MsG0280010233.01.T01:CDS 50.0%
TTTGGAGATGCTCGCTCACT+TGG - Chr2:66451974-66451993 None:intergenic 50.0%
! AGCTAAAGACCTACGGGCTA+CGG + Chr2:66449412-66449431 MsG0280010233.01.T01:intron 50.0%
! CCGGAGTGGACTTAGATTGA+CGG + Chr2:66448328-66448347 MsG0280010233.01.T01:intron 50.0%
! CGTTAACGGTAATGGTGCTC+CGG + Chr2:66447467-66447486 MsG0280010233.01.T01:CDS 50.0%
! GCACAAGGCTGCCTTTTCAT+AGG - Chr2:66452014-66452033 None:intergenic 50.0%
! GCAGCCTTGTGCATCTTACT+TGG + Chr2:66452022-66452041 MsG0280010233.01.T01:three_prime_UTR 50.0%
! GGTCGAGAGTGTAAGGTTGT+AGG + Chr2:66448441-66448460 MsG0280010233.01.T01:intron 50.0%
! TATTCGGGTTCGGAGAGTGA+AGG + Chr2:66447774-66447793 MsG0280010233.01.T01:CDS 50.0%
! TGGTTCGGAGTCGGAGTATT+CGG + Chr2:66447758-66447777 MsG0280010233.01.T01:CDS 50.0%
!! GTTATAGCGGGTCTAGGGAA+GGG + Chr2:66449495-66449514 MsG0280010233.01.T01:intron 50.0%
!! TGTTATAGCGGGTCTAGGGA+AGG + Chr2:66449494-66449513 MsG0280010233.01.T01:intron 50.0%
!! TTCGGATTCCGGTTCGGATT+CGG + Chr2:66447707-66447726 MsG0280010233.01.T01:CDS 50.0%
!! TTTCATTGGTGGGCTGGACT+TGG + Chr2:66448676-66448695 MsG0280010233.01.T01:intron 50.0%
ACTGTCTACACGGCAGCATC+AGG - Chr2:66451715-66451734 None:intergenic 55.0%
AGAAGCGAAGGAGGAGAGAG+AGG + Chr2:66447823-66447842 MsG0280010233.01.T01:CDS 55.0%
AGAGCAAGCACAACTCAGGG+AGG + Chr2:66451537-66451556 MsG0280010233.01.T01:CDS 55.0%
AGAGGAAGGAGAAGCGAAGG+AGG + Chr2:66447814-66447833 MsG0280010233.01.T01:CDS 55.0%
AGCACAACTCAGGGAGGAGA+TGG + Chr2:66451543-66451562 MsG0280010233.01.T01:CDS 55.0%
AGCGATGAATCCGAACGGTC+TGG + Chr2:66447738-66447757 MsG0280010233.01.T01:CDS 55.0%
ATTGAGTCTCTGGACTCGCC+TGG + Chr2:66448604-66448623 MsG0280010233.01.T01:intron 55.0%
CAAGTACACCACCACCTCTG+TGG - Chr2:66448392-66448411 None:intergenic 55.0%
CACGGTCCTGATTGAGTCTC+TGG + Chr2:66448594-66448613 MsG0280010233.01.T01:intron 55.0%
CATCAGGGTCCAACCTTCTC+TGG - Chr2:66451699-66451718 None:intergenic 55.0%
CGAGCATCTCCAAACTGTCC+AGG + Chr2:66451980-66451999 MsG0280010233.01.T01:three_prime_UTR 55.0%
CTCTGACTCCGAATCCGAAC+CGG - Chr2:66447718-66447737 None:intergenic 55.0%
CTGCTGCTGCAATCCAGAGA+AGG + Chr2:66451683-66451702 MsG0280010233.01.T01:CDS 55.0%
CTGTCTACACGGCAGCATCA+GGG - Chr2:66451714-66451733 None:intergenic 55.0%
GAAAACATCCTCCCAGTCCC+AGG - Chr2:66450100-66450119 None:intergenic 55.0%
GAAGCGAAGGAGGAGAGAGA+GGG + Chr2:66447824-66447843 MsG0280010233.01.T01:CDS 55.0%
GACGGTTGAGTGGCTGAGTA+TGG + Chr2:66448358-66448377 MsG0280010233.01.T01:intron 55.0%
GAGAGAGGAAGGAGAGGAAG+AGG + Chr2:66447796-66447815 MsG0280010233.01.T01:CDS 55.0%
GAGGAAGGAGAGGAAGAGGA+AGG + Chr2:66447800-66447819 MsG0280010233.01.T01:CDS 55.0%
GCGAGTCCAGAGACTCAATC+AGG - Chr2:66448603-66448622 None:intergenic 55.0%
GGAAGAGGAAGGAGAAGCGA+AGG + Chr2:66447811-66447830 MsG0280010233.01.T01:CDS 55.0%
GGAGAGTGAAGGAGAGAGGA+AGG + Chr2:66447785-66447804 MsG0280010233.01.T01:CDS 55.0%
GTCGTCTTTCTCTGAGCTGG+TGG - Chr2:66447502-66447521 None:intergenic 55.0%
GTGAAGGAGAGAGGAAGGAG+AGG + Chr2:66447790-66447809 MsG0280010233.01.T01:CDS 55.0%
GTTCGGAGAGTGAAGGAGAG+AGG + Chr2:66447781-66447800 MsG0280010233.01.T01:CDS 55.0%
TACACCACCACCTCTGTGGA+GGG - Chr2:66448388-66448407 None:intergenic 55.0%
TCCAGAGTTCACCGCATGGT+TGG + Chr2:66449934-66449953 MsG0280010233.01.T01:CDS 55.0%
TGCTGCCGTGTAGACAGTGT+AGG + Chr2:66451717-66451736 MsG0280010233.01.T01:exon 55.0%
TTGAGTCTCTGGACTCGCCT+GGG + Chr2:66448605-66448624 MsG0280010233.01.T01:intron 55.0%
TTTCAGTTGCCGTAGCCCGT+AGG - Chr2:66449424-66449443 None:intergenic 55.0%
! GATCCGTTTCATTGGTGGGC+TGG + Chr2:66448670-66448689 MsG0280010233.01.T01:intron 55.0%
! GGAGTCGGAGTATTCGGGTT+CGG + Chr2:66447764-66447783 MsG0280010233.01.T01:CDS 55.0%
! GGTTCGGAGTCGGAGTATTC+GGG + Chr2:66447759-66447778 MsG0280010233.01.T01:CDS 55.0%
ACACCACCACCTCTGTGGAG+GGG - Chr2:66448387-66448406 None:intergenic 60.0%
AGCGTCCAGAGTTCACCGCA+TGG + Chr2:66449930-66449949 MsG0280010233.01.T01:CDS 60.0%
CAGCCACTCAACCGTCTCTC+AGG - Chr2:66448354-66448373 None:intergenic 60.0%
CGACTCCGAACCAGACCGTT+CGG - Chr2:66447751-66447770 None:intergenic 60.0%
CTCGCCTGGGTGTGCTTCTA+TGG + Chr2:66448618-66448637 MsG0280010233.01.T01:intron 60.0%
GCCAACCATGCGGTGAACTC+TGG - Chr2:66449938-66449957 None:intergenic 60.0%
GCCGTCGTCTTTCTCTGAGC+TGG - Chr2:66447505-66447524 None:intergenic 60.0%
GTACACCACCACCTCTGTGG+AGG - Chr2:66448389-66448408 None:intergenic 60.0%
GTATGGCATCCCCTCCACAG+AGG + Chr2:66448375-66448394 MsG0280010233.01.T01:intron 60.0%
TGACGCAACAGTTGGAGGCC+TGG - Chr2:66449608-66449627 None:intergenic 60.0%
TGCGGTGAACTCTGGACGCT+TGG - Chr2:66449930-66449949 None:intergenic 60.0%
! GACGCCATAGAAGCACACCC+AGG - Chr2:66448625-66448644 None:intergenic 60.0%
! TAGCGGGTCTAGGGAAGGGT+AGG + Chr2:66449499-66449518 MsG0280010233.01.T01:intron 60.0%
!! CGAACGGTCTGGTTCGGAGT+CGG + Chr2:66447749-66447768 MsG0280010233.01.T01:CDS 60.0%
!! GAGCTGGTGGCGATTTTCGC+CGG - Chr2:66447489-66447508 None:intergenic 60.0%
CATCCCCTCCACAGAGGTGG+TGG + Chr2:66448381-66448400 MsG0280010233.01.T01:intron 65.0%
CGGCCTGAGAGACGGTTGAG+TGG + Chr2:66448348-66448367 MsG0280010233.01.T01:intron 65.0%
GCGAAGGAGGAGAGAGAGGG+AGG + Chr2:66447827-66447846 MsG0280010233.01.T01:CDS 65.0%
TGGCATCCCCTCCACAGAGG+TGG + Chr2:66448378-66448397 MsG0280010233.01.T01:intron 65.0%
GGGCTGGACTTGGCCCAGTC+TGG + Chr2:66448686-66448705 MsG0280010233.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 66447437 66452252 66447437 ID=MsG0280010233.01;Name=MsG0280010233.01
Chr2 mRNA 66447437 66452252 66447437 ID=MsG0280010233.01.T01;Parent=MsG0280010233.01;Name=MsG0280010233.01.T01;_AED=0.34;_eAED=0.34;_QI=19|1|1|1|0.57|0.87|8|523|340
Chr2 exon 66447437 66448027 66447437 ID=MsG0280010233.01.T01:exon:5348;Parent=MsG0280010233.01.T01
Chr2 exon 66449925 66449970 66449925 ID=MsG0280010233.01.T01:exon:5349;Parent=MsG0280010233.01.T01
Chr2 exon 66450356 66450405 66450356 ID=MsG0280010233.01.T01:exon:5350;Parent=MsG0280010233.01.T01
Chr2 exon 66450699 66450740 66450699 ID=MsG0280010233.01.T01:exon:5351;Parent=MsG0280010233.01.T01
Chr2 exon 66450912 66451025 66450912 ID=MsG0280010233.01.T01:exon:5352;Parent=MsG0280010233.01.T01
Chr2 exon 66451341 66451419 66451341 ID=MsG0280010233.01.T01:exon:5353;Parent=MsG0280010233.01.T01
Chr2 exon 66451523 66451594 66451523 ID=MsG0280010233.01.T01:exon:5354;Parent=MsG0280010233.01.T01
Chr2 exon 66451682 66452252 66451682 ID=MsG0280010233.01.T01:exon:5355;Parent=MsG0280010233.01.T01
Chr2 five_prime_UTR 66447437 66447455 66447437 ID=MsG0280010233.01.T01:five_prime_utr;Parent=MsG0280010233.01.T01
Chr2 CDS 66447456 66448027 66447456 ID=MsG0280010233.01.T01:cds;Parent=MsG0280010233.01.T01
Chr2 CDS 66449925 66449970 66449925 ID=MsG0280010233.01.T01:cds;Parent=MsG0280010233.01.T01
Chr2 CDS 66450356 66450405 66450356 ID=MsG0280010233.01.T01:cds;Parent=MsG0280010233.01.T01
Chr2 CDS 66450699 66450740 66450699 ID=MsG0280010233.01.T01:cds;Parent=MsG0280010233.01.T01
Chr2 CDS 66450912 66451025 66450912 ID=MsG0280010233.01.T01:cds;Parent=MsG0280010233.01.T01
Chr2 CDS 66451341 66451419 66451341 ID=MsG0280010233.01.T01:cds;Parent=MsG0280010233.01.T01
Chr2 CDS 66451523 66451594 66451523 ID=MsG0280010233.01.T01:cds;Parent=MsG0280010233.01.T01
Chr2 CDS 66451682 66451729 66451682 ID=MsG0280010233.01.T01:cds;Parent=MsG0280010233.01.T01
Chr2 three_prime_UTR 66451730 66452252 66451730 ID=MsG0280010233.01.T01:three_prime_utr;Parent=MsG0280010233.01.T01
Gene Sequence

>MsG0280010233.01.T01

ATGTCGAGAAACGTTAACGGTAATGGTGCTCCGGCGAAAATCGCCACCAGCTCAGAGAAAGACGACGGCGACGCTCCGTCGAAAAGAGATTCAAGGAAAACACGAGAATATTCCGATATAGACACACAAACCGATAGAAAGCATAGTAGCTCAAAGAAGAAATCGCGTGAGAGTTCAGATTCCGATTCCGATAAACGACGCCGTAGGAAGAGAAAATCACGTCGGAGATACAGCAGTGATGATGAATCGGATTCGGATTCCGGTTCGGATTCGGAGTCAGAGAGCGATGAATCCGAACGGTCTGGTTCGGAGTCGGAGTATTCGGGTTCGGAGAGTGAAGGAGAGAGGAAGGAGAGGAAGAGGAAGGAGAAGCGAAGGAGGAGAGAGAGGGAGGAAGAGAAGAGAAGGAGAAGAGAGAAAGAGAAGAAGAGAAGGAAGAAGGAGAAAGAAGAAGAGAGAAGGAAAAAAGAGAAACGGAAAATGAAGAAGAAGGAGAAAAAGGAGAGAGGGAAGAAAGGTGCTGTGACTAATTTATGGGGAAAGTATGGGATTATTAGAGAAACTGATATGTGGACCAAGCGTCCAGAGTTCACCGCATGGTTGGCAGAAGTTAAGCTGGTAAATATGGAGCATCTGTCTAATTGGGAAGAAAAACAGATGTTCAAAGAATTTATGGAGGATCACAACACAGCTACGTTCCCTTCCAAAAAGTATTACAGTCTTGATGCTTACTACAGGCGTCAAATGGAAAAAGAGATGAAAAAGGGTTATAAGAAGGTTCAGCCTAAGGAACGAACAGTTTTCAATGACGAAGAACAGCGCAGACAAGAAATGTTGCAAGTACGTGAAAAACAGAAGGAAGAGCAAGTGATAGCTTTGAAGCGTGAAATGGAAAGTGGAATGGCACAAGCAATGAAAGAGCAAGCACAACTCAGGGAGGAGATGGCTTACCAGTACAAGCTTGGCAACTTTGAGGCTGCTGCTGCAATCCAGAGAAGGTTGGACCCTGATGCTGCCGTGTAG

Protein sequence

>MsG0280010233.01.T01

MSRNVNGNGAPAKIATSSEKDDGDAPSKRDSRKTREYSDIDTQTDRKHSSSKKKSRESSDSDSDKRRRRKRKSRRRYSSDDESDSDSGSDSESESDESERSGSESEYSGSESEGERKERKRKEKRRRREREEEKRRRREKEKKRRKKEKEEERRKKEKRKMKKKEKKERGKKGAVTNLWGKYGIIRETDMWTKRPEFTAWLAEVKLVNMEHLSNWEEKQMFKEFMEDHNTATFPSKKYYSLDAYYRRQMEKEMKKGYKKVQPKERTVFNDEEQRRQEMLQVREKQKEEQVIALKREMESGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRLDPDAAV*