Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016510.01.T01 | XP_003602219.1 | 92.243 | 593 | 11 | 2 | 1 | 559 | 1 | 592 | 0 | 1083 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016510.01.T01 | P0DO24 | 32.727 | 165 | 86 | 5 | 393 | 546 | 372 | 522 | 1.72E-13 | 77 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016510.01.T01 | G7J6T8 | 92.243 | 593 | 11 | 2 | 1 | 559 | 1 | 592 | 0.0 | 1083 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048058.01 | MsG0380016510.01 | 0.833145 | 6.310630e-56 | 7.204483e-53 |
| MsG0180000001.01 | MsG0380016510.01 | 0.807614 | 4.637087e-50 | 2.594548e-47 |
| MsG0180000197.01 | MsG0380016510.01 | 0.831298 | 1.807062e-55 | 1.952755e-52 |
| MsG0180000295.01 | MsG0380016510.01 | 0.804950 | 1.688570e-49 | 8.822649e-47 |
| MsG0180000555.01 | MsG0380016510.01 | 0.835570 | 1.553547e-56 | 1.907220e-53 |
| MsG0180000741.01 | MsG0380016510.01 | 0.832502 | 9.112330e-56 | 1.020463e-52 |
| MsG0180000821.01 | MsG0380016510.01 | 0.813739 | 2.198101e-51 | 1.447218e-48 |
| MsG0180001117.01 | MsG0380016510.01 | 0.800696 | 1.276835e-48 | 5.984157e-46 |
| MsG0180001173.01 | MsG0380016510.01 | 0.832160 | 1.107770e-55 | 1.227937e-52 |
| MsG0180001178.01 | MsG0380016510.01 | 0.803701 | 3.075172e-49 | 1.555782e-46 |
| MsG0180001237.01 | MsG0380016510.01 | 0.822628 | 2.139564e-53 | 1.800723e-50 |
| MsG0180001294.01 | MsG0380016510.01 | 0.807113 | 5.923483e-50 | 3.271374e-47 |
| MsG0180001565.01 | MsG0380016510.01 | 0.833140 | 6.328879e-56 | 7.224225e-53 |
| MsG0180001566.01 | MsG0380016510.01 | 0.838850 | 2.250734e-57 | 3.052645e-54 |
| MsG0180001911.01 | MsG0380016510.01 | 0.810546 | 1.092277e-50 | 6.602834e-48 |
| MsG0180002074.01 | MsG0380016510.01 | 0.852310 | 5.021229e-61 | 1.045008e-57 |
| MsG0180002075.01 | MsG0380016510.01 | 0.816608 | 5.065694e-52 | 3.606226e-49 |
| MsG0180003303.01 | MsG0380016510.01 | 0.803297 | 3.728934e-49 | 1.867012e-46 |
| MsG0180003444.01 | MsG0380016510.01 | 0.822618 | 2.151140e-53 | 1.809946e-50 |
| MsG0180004008.01 | MsG0380016510.01 | 0.815372 | 9.560300e-52 | 6.579513e-49 |
| MsG0180004139.01 | MsG0380016510.01 | 0.802847 | 4.619225e-49 | 2.286536e-46 |
| MsG0180004222.01 | MsG0380016510.01 | 0.817918 | 2.569519e-52 | 1.896080e-49 |
| MsG0180004437.01 | MsG0380016510.01 | 0.817570 | 3.079037e-52 | 2.250390e-49 |
| MsG0180004598.01 | MsG0380016510.01 | 0.803423 | 3.511523e-49 | 1.763937e-46 |
| MsG0180004689.01 | MsG0380016510.01 | 0.806869 | 6.669238e-50 | 3.660254e-47 |
| MsG0180004730.01 | MsG0380016510.01 | 0.801248 | 9.849555e-49 | 4.681289e-46 |
| MsG0180004989.01 | MsG0380016510.01 | 0.807867 | 4.097391e-50 | 2.307729e-47 |
| MsG0180004991.01 | MsG0380016510.01 | 0.811537 | 6.661377e-51 | 4.134314e-48 |
| MsG0180005188.01 | MsG0380016510.01 | 0.825172 | 5.419196e-54 | 4.902529e-51 |
| MsG0180005443.01 | MsG0380016510.01 | 0.854146 | 1.494496e-61 | 3.306503e-58 |
| MsG0180005451.01 | MsG0380016510.01 | 0.857514 | 1.549805e-62 | 3.835080e-59 |
| MsG0180005493.01 | MsG0380016510.01 | 0.882170 | 1.303575e-70 | 7.858040e-67 |
| MsG0180005507.01 | MsG0380016510.01 | 0.837685 | 4.491298e-57 | 5.879457e-54 |
| MsG0180005944.01 | MsG0380016510.01 | 0.810459 | 1.140518e-50 | 6.878538e-48 |
| MsG0180006023.01 | MsG0380016510.01 | 0.821851 | 3.240633e-53 | 2.667489e-50 |
| MsG0180006061.01 | MsG0380016510.01 | 0.836859 | 7.310348e-57 | 9.330056e-54 |
| MsG0180006235.01 | MsG0380016510.01 | 0.813547 | 2.421564e-51 | 1.586151e-48 |
| MsG0180006260.01 | MsG0380016510.01 | 0.841327 | 5.082589e-58 | 7.441616e-55 |
| MsG0280010632.01 | MsG0380016510.01 | 0.814346 | 1.614817e-51 | 1.080833e-48 |
| MsG0280010735.01 | MsG0380016510.01 | 0.819740 | 9.908456e-53 | 7.689562e-50 |
| MsG0280010816.01 | MsG0380016510.01 | 0.803283 | 3.753647e-49 | 1.878722e-46 |
| MsG0280011085.01 | MsG0380016510.01 | 0.809394 | 1.933960e-50 | 1.134165e-47 |
| MsG0280011105.01 | MsG0380016510.01 | 0.831145 | 1.970926e-55 | 2.120183e-52 |
| MsG0280011293.01 | MsG0380016510.01 | 0.818612 | 1.790163e-52 | 1.346363e-49 |
| MsG0280011334.01 | MsG0380016510.01 | 0.809319 | 2.006635e-50 | 1.174424e-47 |
| MsG0280011336.01 | MsG0380016510.01 | 0.804634 | 1.965834e-49 | 1.018700e-46 |
| MsG0380013548.01 | MsG0380016510.01 | 0.810023 | 1.416116e-50 | 8.444304e-48 |
| MsG0380014576.01 | MsG0380016510.01 | 0.823278 | 1.509586e-53 | 1.293931e-50 |
| MsG0380015347.01 | MsG0380016510.01 | 0.800363 | 1.492640e-48 | 6.937119e-46 |
| MsG0380015702.01 | MsG0380016510.01 | 0.898988 | 3.091478e-77 | 3.745160e-73 |
| MsG0380016227.01 | MsG0380016510.01 | 0.834375 | 3.108175e-56 | 3.681770e-53 |
| MsG0380016236.01 | MsG0380016510.01 | 0.821747 | 3.426240e-53 | 2.811599e-50 |
| MsG0380016510.01 | MsG0380017045.01 | 0.802034 | 6.795438e-49 | 3.294559e-46 |
| MsG0380016510.01 | MsG0380017055.01 | 0.856481 | 3.124748e-62 | 7.469688e-59 |
| MsG0380016510.01 | MsG0380017195.01 | 0.809253 | 2.073488e-50 | 1.211428e-47 |
| MsG0380016510.01 | MsG0380017232.01 | 0.808326 | 3.272376e-50 | 1.865679e-47 |
| MsG0380016510.01 | MsG0380017836.01 | 0.815738 | 7.927812e-52 | 5.511323e-49 |
| MsG0380016510.01 | MsG0380018015.01 | 0.827480 | 1.528922e-54 | 1.477857e-51 |
| MsG0380016510.01 | MsG0480018846.01 | 0.851118 | 1.092608e-60 | 2.188666e-57 |
| MsG0380016510.01 | MsG0480019170.01 | 0.801280 | 9.698720e-49 | 4.613444e-46 |
| MsG0380016510.01 | MsG0480020242.01 | 0.859352 | 4.389900e-63 | 1.156103e-59 |
| MsG0380016510.01 | MsG0480020331.01 | 0.816598 | 5.092358e-52 | 3.624138e-49 |
| MsG0380016510.01 | MsG0480020540.01 | 0.822317 | 2.527034e-53 | 2.107869e-50 |
| MsG0380016510.01 | MsG0480021778.01 | 0.821304 | 4.334428e-53 | 3.513205e-50 |
| MsG0380016510.01 | MsG0480021900.01 | 0.839444 | 1.578456e-57 | 2.180309e-54 |
| MsG0380016510.01 | MsG0480022094.01 | 0.855064 | 8.105185e-62 | 1.848063e-58 |
| MsG0380016510.01 | MsG0480022115.01 | 0.840192 | 1.008309e-57 | 1.425418e-54 |
| MsG0380016510.01 | MsG0480022228.01 | 0.881865 | 1.681521e-70 | 1.001598e-66 |
| MsG0380016510.01 | MsG0480022597.01 | 0.836598 | 8.519483e-57 | 1.078748e-53 |
| MsG0380016510.01 | MsG0480022598.01 | 0.855708 | 5.263204e-62 | 1.226173e-58 |
| MsG0380016510.01 | MsG0480022719.01 | 0.810535 | 1.098453e-50 | 6.638167e-48 |
| MsG0380016510.01 | MsG0480023421.01 | 0.813467 | 2.522155e-51 | 1.648466e-48 |
| MsG0380016510.01 | MsG0480023451.01 | 0.813167 | 2.935355e-51 | 1.902686e-48 |
| MsG0380016510.01 | MsG0480023500.01 | 0.821007 | 5.074943e-53 | 4.080069e-50 |
| MsG0380016510.01 | MsG0480023620.01 | 0.835035 | 2.120818e-56 | 2.562099e-53 |
| MsG0380016510.01 | MsG0480023718.01 | 0.806215 | 9.166257e-50 | 4.947212e-47 |
| MsG0380016510.01 | MsG0480024010.01 | 0.802028 | 6.811662e-49 | 3.302022e-46 |
| MsG0380016510.01 | MsG0580024157.01 | 0.878271 | 3.214279e-69 | 1.667815e-65 |
| MsG0380016510.01 | MsG0580024323.01 | 0.818321 | 2.083682e-52 | 1.554662e-49 |
| MsG0380016510.01 | MsG0580024721.01 | 0.826055 | 3.346045e-54 | 3.103989e-51 |
| MsG0380016510.01 | MsG0580024960.01 | 0.846392 | 2.236190e-59 | 3.843267e-56 |
| MsG0380016510.01 | MsG0580025008.01 | 0.802520 | 5.396818e-49 | 2.649004e-46 |
| MsG0380016510.01 | MsG0580025072.01 | 0.814716 | 1.337449e-51 | 9.041703e-49 |
| MsG0380016510.01 | MsG0580025206.01 | 0.807234 | 5.584988e-50 | 3.094246e-47 |
| MsG0380016510.01 | MsG0580025352.01 | 0.827769 | 1.302660e-54 | 1.269704e-51 |
| MsG0380016510.01 | MsG0580025900.01 | 0.806429 | 8.261759e-50 | 4.483250e-47 |
| MsG0380016510.01 | MsG0580027261.01 | 0.805652 | 1.203820e-49 | 6.404039e-47 |
| MsG0380016510.01 | MsG0580027628.01 | 0.802959 | 4.380109e-49 | 2.174212e-46 |
| MsG0380016510.01 | MsG0580029009.01 | 0.820664 | 6.085190e-53 | 4.844842e-50 |
| MsG0380016510.01 | MsG0580029592.01 | 0.812023 | 5.221713e-51 | 3.282941e-48 |
| MsG0380016510.01 | MsG0680030321.01 | 0.820446 | 6.831833e-53 | 5.406888e-50 |
| MsG0380016510.01 | MsG0680030621.01 | 0.800165 | 1.638136e-48 | 7.574598e-46 |
| MsG0380016510.01 | MsG0680030679.01 | 0.819494 | 1.127575e-52 | 8.691005e-50 |
| MsG0380016510.01 | MsG0680030684.01 | 0.810599 | 1.063906e-50 | 6.440693e-48 |
| MsG0380016510.01 | MsG0680030740.01 | 0.842628 | 2.301723e-58 | 3.510478e-55 |
| MsG0380016510.01 | MsG0680031877.01 | 0.851540 | 8.305483e-61 | 1.686589e-57 |
| MsG0380016510.01 | MsG0680031975.01 | 0.840621 | 7.787202e-58 | 1.115524e-54 |
| MsG0380016510.01 | MsG0680034757.01 | 0.862205 | 5.974416e-64 | 1.735633e-60 |
| MsG0380016510.01 | MsG0680035656.01 | 0.812069 | 5.103617e-51 | 3.212666e-48 |
| MsG0380016510.01 | MsG0680035764.01 | 0.807736 | 4.368678e-50 | 2.452279e-47 |
| MsG0380016510.01 | MsG0780036630.01 | 0.856417 | 3.262831e-62 | 7.782888e-59 |
| MsG0380016510.01 | MsG0780036633.01 | 0.817860 | 2.648489e-52 | 1.951250e-49 |
| MsG0380016510.01 | MsG0780036635.01 | 0.813223 | 2.853237e-51 | 1.852302e-48 |
| MsG0380016510.01 | MsG0780036773.01 | 0.834752 | 2.499613e-56 | 2.993933e-53 |
| MsG0380016510.01 | MsG0780037975.01 | 0.840853 | 6.772107e-58 | 9.771526e-55 |
| MsG0380016510.01 | MsG0780038602.01 | 0.812424 | 4.269393e-51 | 2.713692e-48 |
| MsG0380016510.01 | MsG0780039528.01 | 0.800751 | 1.244021e-48 | 5.838596e-46 |
| MsG0380016510.01 | MsG0780039654.01 | 0.835297 | 1.821512e-56 | 2.218354e-53 |
| MsG0380016510.01 | MsG0780039655.01 | 0.860360 | 2.180545e-63 | 5.944780e-60 |
| MsG0380016510.01 | MsG0780039712.01 | 0.841449 | 4.718772e-58 | 6.936695e-55 |
| MsG0380016510.01 | MsG0780039717.01 | 0.852133 | 5.635950e-61 | 1.166290e-57 |
| MsG0380016510.01 | MsG0780039817.01 | 0.815510 | 8.911037e-52 | 6.156059e-49 |
| MsG0380016510.01 | MsG0780040047.01 | 0.816966 | 4.210638e-52 | 3.027289e-49 |
| MsG0380016510.01 | MsG0780040290.01 | 0.823185 | 1.587150e-53 | 1.356842e-50 |
| MsG0380016510.01 | MsG0780040488.01 | 0.831473 | 1.636162e-55 | 1.777460e-52 |
| MsG0380016510.01 | MsG0780040854.01 | 0.811025 | 8.605791e-51 | 5.269672e-48 |
| MsG0380016510.01 | MsG0780041310.01 | 0.810167 | 1.318682e-50 | 7.892408e-48 |
| MsG0380016510.01 | MsG0780041423.01 | 0.801424 | 9.063858e-49 | 4.326969e-46 |
| MsG0380016510.01 | MsG0780041469.01 | 0.816773 | 4.652354e-52 | 3.326933e-49 |
| MsG0380016510.01 | MsG0780041671.01 | 0.821264 | 4.428201e-53 | 3.584972e-50 |
| MsG0380016510.01 | MsG0780041764.01 | 0.828570 | 8.352576e-55 | 8.334230e-52 |
| MsG0380016510.01 | MsG0780041787.01 | 0.822505 | 2.285716e-53 | 1.916822e-50 |
| MsG0380016510.01 | MsG0880042329.01 | 0.825995 | 3.458590e-54 | 3.202959e-51 |
| MsG0380016510.01 | MsG0880042547.01 | 0.821340 | 4.253636e-53 | 3.451174e-50 |
| MsG0380016510.01 | MsG0880042829.01 | 0.829536 | 4.872121e-55 | 5.000599e-52 |
| MsG0380016510.01 | MsG0880042836.01 | 0.825369 | 4.867828e-54 | 4.428071e-51 |
| MsG0380016510.01 | MsG0880042944.01 | 0.802904 | 4.496365e-49 | 2.228867e-46 |
| MsG0380016510.01 | MsG0880043252.01 | 0.808453 | 3.074673e-50 | 1.758770e-47 |
| MsG0380016510.01 | MsG0880043489.01 | 0.813716 | 2.223086e-51 | 1.462807e-48 |
| MsG0380016510.01 | MsG0880043522.01 | 0.805733 | 1.157811e-49 | 6.172467e-47 |
| MsG0380016510.01 | MsG0880044917.01 | 0.800369 | 1.488943e-48 | 6.920930e-46 |
| MsG0380016510.01 | MsG0880045185.01 | 0.846197 | 2.527040e-59 | 4.315398e-56 |
| MsG0380016510.01 | MsG0880045393.01 | 0.804340 | 2.264614e-49 | 1.164679e-46 |
| MsG0380016510.01 | MsG0880045433.01 | -0.813399 | 2.610777e-51 | 1.703178e-48 |
| MsG0380016510.01 | MsG0880045448.01 | 0.816966 | 4.211388e-52 | 3.027793e-49 |
| MsG0380016510.01 | MsG0880045914.01 | 0.813759 | 2.175338e-51 | 1.432969e-48 |
| MsG0380016510.01 | MsG0880046027.01 | 0.850705 | 1.428396e-60 | 2.822488e-57 |
| MsG0380016510.01 | MsG0880046560.01 | 0.841856 | 3.685893e-58 | 5.487038e-55 |
| MsG0380016510.01 | MsG0880046762.01 | 0.819530 | 1.106679e-52 | 8.538505e-50 |
| MsG0380016510.01 | MsG0880047044.01 | 0.807400 | 5.149114e-50 | 2.865209e-47 |
| MsG0380016510.01 | MsG0880047289.01 | 0.819011 | 1.452822e-52 | 1.104943e-49 |
| MsG0380016510.01 | MsG0880047293.01 | 0.821286 | 4.378137e-53 | 3.546685e-50 |
| MsG0380016510.01 | MsG0880047337.01 | 0.844778 | 6.121316e-59 | 9.989436e-56 |
| MsG0380016510.01 | MsG0880047353.01 | 0.838434 | 2.881948e-57 | 3.859824e-54 |
| MsG0380016510.01 | MsG0880047437.01 | 0.806173 | 9.352851e-50 | 5.042472e-47 |
| MsG0280006692.01 | MsG0380016510.01 | 0.866619 | 2.497219e-65 | 8.471195e-62 |
| MsG0280007048.01 | MsG0380016510.01 | 0.817594 | 3.041030e-52 | 2.224075e-49 |
| MsG0280007484.01 | MsG0380016510.01 | 0.820294 | 7.399413e-53 | 5.831408e-50 |
| MsG0280007740.01 | MsG0380016510.01 | 0.806974 | 6.337171e-50 | 3.487380e-47 |
| MsG0280007764.01 | MsG0380016510.01 | 0.857877 | 1.210064e-62 | 3.030676e-59 |
| MsG0280007790.01 | MsG0380016510.01 | 0.834235 | 3.369583e-56 | 3.974376e-53 |
| MsG0280007984.01 | MsG0380016510.01 | 0.808934 | 2.426336e-50 | 1.405432e-47 |
| MsG0280008270.01 | MsG0380016510.01 | 0.832997 | 6.866524e-56 | 7.804671e-53 |
| MsG0280008614.01 | MsG0380016510.01 | 0.806450 | 8.176313e-50 | 4.439342e-47 |
| MsG0280009509.01 | MsG0380016510.01 | 0.833812 | 4.301976e-56 | 5.010384e-53 |
| MsG0280009515.01 | MsG0380016510.01 | 0.815910 | 7.255486e-52 | 5.067169e-49 |
| MsG0280009774.01 | MsG0380016510.01 | 0.821046 | 4.970789e-53 | 4.000681e-50 |
| MsG0280010001.01 | MsG0380016510.01 | 0.835835 | 1.331222e-56 | 1.647389e-53 |
| MsG0280010109.01 | MsG0380016510.01 | 0.818643 | 1.760959e-52 | 1.325570e-49 |
| MsG0280010239.01 | MsG0380016510.01 | 0.810957 | 8.902718e-51 | 5.441763e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016510.01.T01 | MTR_3g091180 | 92.243 | 593 | 11 | 2 | 1 | 559 | 1 | 592 | 0.0 | 1083 |
| MsG0380016510.01.T01 | MTR_1g092540 | 61.921 | 604 | 176 | 7 | 1 | 558 | 1 | 596 | 0.0 | 724 |
| MsG0380016510.01.T01 | MTR_1g061540 | 41.436 | 543 | 279 | 13 | 5 | 536 | 9 | 523 | 1.56e-113 | 348 |
| MsG0380016510.01.T01 | MTR_7g103490 | 39.410 | 576 | 299 | 9 | 1 | 552 | 5 | 554 | 3.27e-110 | 340 |
| MsG0380016510.01.T01 | MTR_6g461910 | 38.910 | 532 | 265 | 9 | 19 | 545 | 29 | 505 | 2.33e-107 | 332 |
| MsG0380016510.01.T01 | MTR_0318s0020 | 61.582 | 177 | 63 | 1 | 372 | 548 | 395 | 566 | 9.14e-68 | 229 |
| MsG0380016510.01.T01 | MTR_0318s0020 | 35.573 | 253 | 144 | 3 | 15 | 248 | 117 | 369 | 5.06e-43 | 162 |
| MsG0380016510.01.T01 | MTR_4g021260 | 28.678 | 537 | 290 | 11 | 15 | 530 | 8 | 472 | 2.28e-67 | 226 |
| MsG0380016510.01.T01 | MTR_1g044135 | 62.893 | 159 | 54 | 2 | 389 | 547 | 436 | 589 | 8.39e-62 | 214 |
| MsG0380016510.01.T01 | MTR_1g044135 | 37.805 | 246 | 134 | 3 | 1 | 229 | 1 | 244 | 1.20e-48 | 178 |
| MsG0380016510.01.T01 | MTR_1g073890 | 61.006 | 159 | 57 | 2 | 389 | 547 | 406 | 559 | 3.36e-59 | 207 |
| MsG0380016510.01.T01 | MTR_1g073890 | 35.659 | 258 | 143 | 5 | 1 | 237 | 1 | 256 | 1.38e-44 | 166 |
| MsG0380016510.01.T01 | MTR_7g063040 | 39.735 | 151 | 84 | 2 | 388 | 533 | 331 | 479 | 2.09e-27 | 115 |
| MsG0380016510.01.T01 | MTR_7g063040 | 23.780 | 328 | 215 | 5 | 21 | 327 | 20 | 333 | 1.23e-25 | 110 |
| MsG0380016510.01.T01 | MTR_1g096970 | 27.570 | 214 | 137 | 3 | 26 | 229 | 51 | 256 | 8.15e-16 | 80.9 |
| MsG0380016510.01.T01 | MTR_1g096970 | 29.747 | 158 | 94 | 2 | 392 | 539 | 270 | 420 | 9.02e-14 | 74.3 |
| MsG0380016510.01.T01 | MTR_3g114010 | 28.774 | 212 | 137 | 5 | 26 | 229 | 122 | 327 | 6.49e-14 | 75.1 |
| MsG0380016510.01.T01 | MTR_3g114010 | 32.895 | 152 | 85 | 4 | 390 | 531 | 340 | 484 | 1.93e-13 | 73.6 |
| MsG0380016510.01.T01 | MTR_3g097240 | 25.980 | 204 | 148 | 1 | 26 | 229 | 141 | 341 | 2.23e-13 | 72.8 |
| MsG0380016510.01.T01 | MTR_3g097240 | 25.980 | 204 | 148 | 1 | 26 | 229 | 141 | 341 | 3.05e-13 | 72.4 |
| MsG0380016510.01.T01 | MTR_3g097240 | 25.980 | 204 | 148 | 1 | 26 | 229 | 141 | 341 | 4.52e-13 | 72.4 |
| MsG0380016510.01.T01 | MTR_1g025340 | 31.210 | 157 | 90 | 4 | 390 | 535 | 345 | 494 | 7.79e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016510.01.T01 | AT5G04550 | 53.654 | 602 | 231 | 5 | 1 | 558 | 1 | 598 | 0.0 | 605 |
| MsG0380016510.01.T01 | AT5G04550 | 53.654 | 602 | 231 | 5 | 1 | 558 | 1 | 598 | 0.0 | 605 |
| MsG0380016510.01.T01 | AT3G23160 | 55.495 | 182 | 72 | 5 | 367 | 547 | 338 | 511 | 1.91e-56 | 198 |
| MsG0380016510.01.T01 | AT3G23160 | 41.063 | 207 | 121 | 1 | 23 | 229 | 40 | 245 | 6.42e-49 | 177 |
| MsG0380016510.01.T01 | AT5G51670 | 54.070 | 172 | 66 | 3 | 377 | 542 | 299 | 463 | 2.21e-52 | 186 |
| MsG0380016510.01.T01 | AT5G51670 | 35.349 | 215 | 127 | 1 | 26 | 228 | 37 | 251 | 3.63e-41 | 155 |
| MsG0380016510.01.T01 | AT5G51670 | 54.070 | 172 | 66 | 3 | 377 | 542 | 299 | 463 | 2.21e-52 | 186 |
| MsG0380016510.01.T01 | AT5G51670 | 35.349 | 215 | 127 | 1 | 26 | 228 | 37 | 251 | 3.63e-41 | 155 |
| MsG0380016510.01.T01 | AT5G08660 | 32.727 | 165 | 86 | 5 | 393 | 546 | 372 | 522 | 1.75e-14 | 77.0 |
| MsG0380016510.01.T01 | AT5G08660 | 27.103 | 214 | 138 | 3 | 26 | 229 | 149 | 354 | 8.11e-11 | 65.5 |
| MsG0380016510.01.T01 | AT5G08660 | 32.727 | 165 | 86 | 5 | 393 | 546 | 372 | 522 | 1.75e-14 | 77.0 |
| MsG0380016510.01.T01 | AT5G08660 | 27.103 | 214 | 138 | 3 | 26 | 229 | 149 | 354 | 8.11e-11 | 65.5 |
| MsG0380016510.01.T01 | AT5G08660 | 32.727 | 165 | 86 | 5 | 393 | 546 | 372 | 522 | 1.75e-14 | 77.0 |
| MsG0380016510.01.T01 | AT5G08660 | 27.103 | 214 | 138 | 3 | 26 | 229 | 149 | 354 | 8.11e-11 | 65.5 |
| MsG0380016510.01.T01 | AT1G34320 | 26.389 | 216 | 139 | 3 | 26 | 229 | 155 | 362 | 5.84e-14 | 75.5 |
| MsG0380016510.01.T01 | AT1G34320 | 29.697 | 165 | 95 | 4 | 384 | 535 | 368 | 524 | 3.61e-13 | 72.8 |
| MsG0380016510.01.T01 | AT1G34320 | 26.389 | 216 | 139 | 3 | 26 | 229 | 155 | 362 | 5.84e-14 | 75.5 |
| MsG0380016510.01.T01 | AT1G34320 | 29.697 | 165 | 95 | 4 | 384 | 535 | 368 | 524 | 3.61e-13 | 72.8 |
| MsG0380016510.01.T01 | AT5G08660 | 27.103 | 214 | 138 | 3 | 26 | 229 | 149 | 354 | 4.74e-11 | 65.5 |
| MsG0380016510.01.T01 | AT1G30755 | 30.968 | 155 | 87 | 3 | 391 | 532 | 353 | 500 | 9.23e-11 | 65.1 |
| MsG0380016510.01.T01 | AT1G30755 | 30.968 | 155 | 87 | 3 | 391 | 532 | 353 | 500 | 9.23e-11 | 65.1 |
| MsG0380016510.01.T01 | AT1G30755 | 30.968 | 155 | 87 | 3 | 391 | 532 | 353 | 500 | 9.23e-11 | 65.1 |
Find 114 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTATGCTTTCCTAAAAT+TGG | 0.164702 | 3:-84494932 | None:intergenic |
| TGTCCAAGCTGGTTAATTTA+TGG | 0.173391 | 3:+84494105 | MsG0380016510.01.T01:CDS |
| CTGAATTATGTCTGCAAATA+TGG | 0.209847 | 3:+84495675 | MsG0380016510.01.T01:CDS |
| CTTCGTATATGGCTTTAATT+TGG | 0.228449 | 3:-84495418 | MsG0380016511.01.T01:CDS |
| GCAGCTGCACCAAGGGTTTC+AGG | 0.229194 | 3:-84495264 | None:intergenic |
| GTTTAAGACACTCGAGTTAT+TGG | 0.231922 | 3:-84494711 | None:intergenic |
| AAACACTCTTCCGCCATAAC+TGG | 0.252428 | 3:+84495049 | MsG0380016510.01.T01:CDS |
| ATCTAGCAGTAATAGTATTA+AGG | 0.255713 | 3:-84494832 | None:intergenic |
| CTTAGAGAATATTGTGAATA+AGG | 0.272293 | 3:-84494642 | None:intergenic |
| GTCTTTGACACAAGTCTTGC+AGG | 0.283346 | 3:+84495459 | MsG0380016510.01.T01:CDS |
| TGATTACACGATACATCTTT+TGG | 0.284499 | 3:+84494613 | MsG0380016510.01.T01:CDS |
| AAAGCCAGCATTTCTCATTC+AGG | 0.310641 | 3:+84494878 | MsG0380016510.01.T01:CDS |
| CGTAGTGATAAACCCATAAA+AGG | 0.312698 | 3:-84494333 | None:intergenic |
| TATGGAGATCGTTGAGAATA+TGG | 0.317599 | 3:+84494238 | MsG0380016510.01.T01:CDS |
| GCTTTATTTGTTCTAACAAT+TGG | 0.326268 | 3:-84494860 | None:intergenic |
| TTCTCAAAACCTTTCAAAAT+CGG | 0.332274 | 3:-84494308 | None:intergenic |
| TACCAGCAGCACATTTGTTC+GGG | 0.351505 | 3:-84495589 | None:intergenic |
| TGGCTTTAATTTGGCCTTGA+GGG | 0.351640 | 3:-84495409 | MsG0380016511.01.T01:CDS |
| GCGCCATCCGACTCATTATT+AGG | 0.353064 | 3:-84494503 | None:intergenic |
| CAAGTTAATTCCCACCCATA+TGG | 0.362762 | 3:-84494365 | None:intergenic |
| TTGTATGCTTTCCTAAAATT+GGG | 0.365181 | 3:-84494931 | None:intergenic |
| CGAAGCAATGTCAAGCATAT+TGG | 0.366671 | 3:+84495491 | MsG0380016510.01.T01:CDS |
| GTGAGTTTCCTTCCCAGTTA+TGG | 0.383182 | 3:-84495062 | None:intergenic |
| GATGCCATGGTCTTCGTATA+TGG | 0.386588 | 3:-84495429 | MsG0380016511.01.T01:CDS |
| GTACCAGCAGCACATTTGTT+CGG | 0.401978 | 3:-84495590 | None:intergenic |
| TTCTTGATTTGCAAAGTAAA+GGG | 0.402434 | 3:-84495616 | None:intergenic |
| TTTCTTGATTTGCAAAGTAA+AGG | 0.404302 | 3:-84495617 | None:intergenic |
| CATTGAACGATTGATCTGTA+TGG | 0.406973 | 3:+84494220 | MsG0380016510.01.T01:CDS |
| GATGGAGGTGCTTGTTGATC+TGG | 0.409544 | 3:+84494457 | MsG0380016510.01.T01:CDS |
| GAGGGCAATTCTCACACGTC+TGG | 0.409757 | 3:-84495391 | MsG0380016511.01.T01:CDS |
| AAGGGGTCCTGAAGAAAATC+TGG | 0.414678 | 3:-84494813 | None:intergenic |
| TCTAGCAGTAATAGTATTAA+GGG | 0.420518 | 3:-84494831 | None:intergenic |
| GGTGACTCATCCACAAAATC+AGG | 0.427673 | 3:+84494908 | MsG0380016510.01.T01:CDS |
| ATTTCTCATTCAGGTCCTCT+TGG | 0.429289 | 3:+84494887 | MsG0380016510.01.T01:CDS |
| CACCAAGGGTTTCAGGTGGA+GGG | 0.429974 | 3:-84495257 | None:intergenic |
| ACACAAGTCTTGCAGGAGAA+TGG | 0.437247 | 3:+84495466 | MsG0380016510.01.T01:CDS |
| GAGGAGATCACAAATTCAAT+TGG | 0.437515 | 3:+84494164 | MsG0380016510.01.T01:CDS |
| GGGATGTTTCTCTGTGGAAC+AGG | 0.445839 | 3:+84494585 | MsG0380016510.01.T01:CDS |
| AGAAGAAAGTTGCATGGAAA+AGG | 0.452080 | 3:+84494543 | MsG0380016510.01.T01:CDS |
| GCACCAAGGGTTTCAGGTGG+AGG | 0.459060 | 3:-84495258 | None:intergenic |
| AAGCAATGGTTGCGGAATCA+TGG | 0.461314 | 3:+84493991 | None:intergenic |
| AATTCTGAGAAGGAGGTGAT+TGG | 0.466034 | 3:+84494053 | MsG0380016510.01.T01:CDS |
| GTCAAGCATATTGGAATGGT+TGG | 0.470687 | 3:+84495500 | MsG0380016510.01.T01:CDS |
| GGAGCTCAATGCAAAATCTC+TGG | 0.491321 | 3:+84495701 | MsG0380016510.01.T01:CDS |
| GCATGAGGTGAAGAACTTGC+GGG | 0.500274 | 3:+84494565 | MsG0380016510.01.T01:CDS |
| ACTACGGGTACAGATCCATA+TGG | 0.502018 | 3:+84494350 | MsG0380016510.01.T01:CDS |
| AGGACCTGAATGAGAAATGC+TGG | 0.505217 | 3:-84494882 | None:intergenic |
| AACCTTTCAAAATCGGATCA+TGG | 0.507399 | 3:-84494301 | None:intergenic |
| TTGATTCATGTTCCTTCCAA+GGG | 0.512029 | 3:-84494975 | None:intergenic |
| ATTGATTCATGTTCCTTCCA+AGG | 0.513777 | 3:-84494976 | None:intergenic |
| AATACTATTACTGCTAGATC+AGG | 0.517795 | 3:+84494836 | MsG0380016510.01.T01:CDS |
| ATTATGTCTGCAAATATGGC+AGG | 0.518317 | 3:+84495679 | MsG0380016510.01.T01:CDS |
| TTGCCATAAATTAACCAGCT+TGG | 0.526727 | 3:-84494108 | None:intergenic |
| TTTACTCAGGTCCCCTTGGA+AGG | 0.533412 | 3:+84494963 | MsG0380016510.01.T01:CDS |
| GTAGTCTGTGGAGGACTCCT+CGG | 0.540847 | 3:+84494018 | MsG0380016510.01.T01:CDS |
| AACACTCTTCCGCCATAACT+GGG | 0.544435 | 3:+84495050 | MsG0380016510.01.T01:CDS |
| ACTCAAGTTGGACCTTTCAA+AGG | 0.547610 | 3:+84495103 | MsG0380016510.01.T01:CDS |
| AGGGCAATTCTCACACGTCT+GGG | 0.550322 | 3:-84495390 | MsG0380016511.01.T01:CDS |
| AACCCTCCACCTGAAACCCT+TGG | 0.551082 | 3:+84495255 | MsG0380016510.01.T01:CDS |
| TGAGTGATAAGCATATATCT+AGG | 0.551088 | 3:+84494135 | MsG0380016510.01.T01:CDS |
| ATGTGGCCGAGTCCGTGGCT+AGG | 0.552509 | 3:+84494264 | MsG0380016510.01.T01:CDS |
| TTCCCGAACAAATGTGCTGC+TGG | 0.552642 | 3:+84495587 | MsG0380016510.01.T01:CDS |
| CATAGTCGAATGACTCAAGT+TGG | 0.553493 | 3:+84495091 | MsG0380016510.01.T01:CDS |
| ACGTGTGAGAATTGCCCTCA+AGG | 0.554129 | 3:+84495395 | MsG0380016510.01.T01:CDS |
| GTCTGGGTAACATGTTGTAC+AGG | 0.554326 | 3:-84495374 | MsG0380016511.01.T01:CDS |
| AGCAAGCTTGATGTCCAAGC+TGG | 0.554952 | 3:+84494094 | MsG0380016510.01.T01:CDS |
| ATAATCACCGAGCTTCTTGT+GGG | 0.555663 | 3:+84495651 | MsG0380016510.01.T01:CDS |
| TATTATTATTCTGTGATGAG+TGG | 0.557224 | 3:-84494787 | None:intergenic |
| AATAATCACCGAGCTTCTTG+TGG | 0.558759 | 3:+84495650 | MsG0380016510.01.T01:CDS |
| GGCACATGTGGCCGAGTCCG+TGG | 0.569052 | 3:+84494259 | MsG0380016510.01.T01:CDS |
| GCAGCTTCTCCACACTTGAT+CGG | 0.571839 | 3:+84495333 | MsG0380016510.01.T01:CDS |
| GCATATATCTAGGTTGAAAG+AGG | 0.572414 | 3:+84494145 | MsG0380016510.01.T01:CDS |
| ATGGCTTTAATTTGGCCTTG+AGG | 0.577697 | 3:-84495410 | MsG0380016511.01.T01:CDS |
| TGCAAGTCTGTATCAAGAGA+TGG | 0.582369 | 3:+84494439 | MsG0380016510.01.T01:CDS |
| TGAAAGCCTAGCCACGGACT+CGG | 0.586035 | 3:-84494270 | None:intergenic |
| GGCATGAGGTGAAGAACTTG+CGG | 0.586790 | 3:+84494564 | MsG0380016510.01.T01:CDS |
| AATCATGGTTTCGTAGTCTG+TGG | 0.589487 | 3:+84494006 | MsG0380016510.01.T01:CDS |
| CGTTGAGAATATGGCACATG+TGG | 0.590918 | 3:+84494247 | MsG0380016510.01.T01:CDS |
| TCTCTTGAATCCCGAAAACA+TGG | 0.590944 | 3:-84494670 | None:intergenic |
| CTCTTCCGCCATAACTGGGA+AGG | 0.593341 | 3:+84495054 | MsG0380016510.01.T01:CDS |
| CAATGTCAAGCATATTGGAA+TGG | 0.593748 | 3:+84495496 | MsG0380016510.01.T01:CDS |
| ATTCAGACCCACAAGAAGCT+CGG | 0.597225 | 3:-84495658 | None:intergenic |
| CGTATCATGTTATGAGCAAG+CGG | 0.599166 | 3:-84495525 | None:intergenic |
| CAAGAGATGGTAGATGATGG+TGG | 0.602012 | 3:+84494686 | MsG0380016510.01.T01:CDS |
| ATTCAAGAGATGGTAGATGA+TGG | 0.602934 | 3:+84494683 | MsG0380016510.01.T01:CDS |
| TGATAAAGCAGCTGCACCAA+GGG | 0.605605 | 3:-84495271 | None:intergenic |
| GCATGATGCTAATTCTGAGA+AGG | 0.608544 | 3:+84494043 | MsG0380016510.01.T01:CDS |
| AGTATCAGAAGAAAGTTGCA+TGG | 0.611702 | 3:+84494537 | MsG0380016510.01.T01:CDS |
| CAAGCCATACATCCTTTGAA+AGG | 0.613969 | 3:-84495115 | None:intergenic |
| TCCTAGATAAGCAATGGTTG+CGG | 0.617445 | 3:+84493983 | None:intergenic |
| GTGATAAAGCAGCTGCACCA+AGG | 0.620790 | 3:-84495272 | None:intergenic |
| TTTCTTTGAAAGCCTAGCCA+CGG | 0.624883 | 3:-84494276 | None:intergenic |
| AGTGAAGCCTAATAATGAGT+CGG | 0.624980 | 3:+84494496 | MsG0380016510.01.T01:CDS |
| CGGGTACAGATCCATATGGG+TGG | 0.627773 | 3:+84494354 | MsG0380016510.01.T01:CDS |
| CTACGGGTACAGATCCATAT+GGG | 0.628821 | 3:+84494351 | MsG0380016510.01.T01:CDS |
| GCAAAATCTCTGGCAGAGTG+TGG | 0.631334 | 3:+84495711 | MsG0380016510.01.T01:CDS |
| AAGCCTAATAATGAGTCGGA+TGG | 0.631568 | 3:+84494500 | MsG0380016510.01.T01:CDS |
| AGTTTCCTTCCCAGTTATGG+CGG | 0.632458 | 3:-84495059 | None:intergenic |
| GAATTAGCATCATGCTTCCG+AGG | 0.632742 | 3:-84494035 | None:intergenic |
| GCGTCGAGACCGATCAAGTG+TGG | 0.634080 | 3:-84495342 | MsG0380016511.01.T01:CDS |
| GCTGCACCAAGGGTTTCAGG+TGG | 0.635184 | 3:-84495261 | None:intergenic |
| TGATGCTAATTCTGAGAAGG+AGG | 0.639412 | 3:+84494046 | MsG0380016510.01.T01:CDS |
| GGGTACAGATCCATATGGGT+GGG | 0.644087 | 3:+84494355 | MsG0380016510.01.T01:CDS |
| CATGGTTTCGTAGTCTGTGG+AGG | 0.648414 | 3:+84494009 | MsG0380016510.01.T01:CDS |
| TTATGTCTGCAAATATGGCA+GGG | 0.650727 | 3:+84495680 | MsG0380016510.01.T01:CDS |
| TGATTCATGTTCCTTCCAAG+GGG | 0.662062 | 3:-84494974 | None:intergenic |
| AAAGACTGATGACGATGCCA+TGG | 0.669183 | 3:-84495442 | MsG0380016511.01.T01:CDS |
| CTAGCAGTAATAGTATTAAG+GGG | 0.675941 | 3:-84494830 | None:intergenic |
| AAGTCTGTATCAAGAGATGG+AGG | 0.682935 | 3:+84494442 | MsG0380016510.01.T01:CDS |
| TTTGTGGATGAGTCACCAAG+AGG | 0.684677 | 3:-84494902 | None:intergenic |
| TTGCTCATAACATGATACGA+TGG | 0.690679 | 3:+84495529 | MsG0380016510.01.T01:CDS |
| ACTTGCGGGATGTTTCTCTG+TGG | 0.694225 | 3:+84494579 | MsG0380016510.01.T01:CDS |
| AAAGCCATATACGAAGACCA+TGG | 0.695835 | 3:+84495425 | MsG0380016510.01.T01:CDS |
| AGTTGCATGGAAAAGGCATG+AGG | 0.701910 | 3:+84494550 | MsG0380016510.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATCTAGCAGTAATAGTATTA+AGG | - | Chr3:84494835-84494854 | None:intergenic | 25.0% |
| ! | CAAAAAAAATGAGCAAGATT+TGG | + | Chr3:84495017-84495036 | MsG0380016510.01.T01:CDS | 25.0% |
| ! | CTTAGAGAATATTGTGAATA+AGG | - | Chr3:84494645-84494664 | None:intergenic | 25.0% |
| ! | TATTATTATTCTGTGATGAG+TGG | - | Chr3:84494790-84494809 | None:intergenic | 25.0% |
| ! | TCTAGCAGTAATAGTATTAA+GGG | - | Chr3:84494834-84494853 | None:intergenic | 25.0% |
| ! | TTCTCAAAACCTTTCAAAAT+CGG | - | Chr3:84494311-84494330 | None:intergenic | 25.0% |
| ! | TTGTATGCTTTCCTAAAATT+GGG | - | Chr3:84494934-84494953 | None:intergenic | 25.0% |
| ! | TTTGTATGCTTTCCTAAAAT+TGG | - | Chr3:84494935-84494954 | None:intergenic | 25.0% |
| !! | ACAAATGTCAATTTTTACTC+AGG | + | Chr3:84494950-84494969 | MsG0380016510.01.T01:CDS | 25.0% |
| !!! | ATTTTTTTTGTTCTAGTGAG+TGG | - | Chr3:84495007-84495026 | None:intergenic | 25.0% |
| !!! | GCTTTATTTGTTCTAACAAT+TGG | - | Chr3:84494863-84494882 | None:intergenic | 25.0% |
| !!! | TTCTTGATTTGCAAAGTAAA+GGG | - | Chr3:84495619-84495638 | None:intergenic | 25.0% |
| !!! | TTTCTTGATTTGCAAAGTAA+AGG | - | Chr3:84495620-84495639 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTTCTAGTGAGT+GGG | - | Chr3:84495006-84495025 | None:intergenic | 25.0% |
| AATACTATTACTGCTAGATC+AGG | + | Chr3:84494836-84494855 | MsG0380016510.01.T01:CDS | 30.0% | |
| CTAGCAGTAATAGTATTAAG+GGG | - | Chr3:84494833-84494852 | None:intergenic | 30.0% | |
| CTGAATTATGTCTGCAAATA+TGG | + | Chr3:84495675-84495694 | MsG0380016510.01.T01:CDS | 30.0% | |
| TGAGTGATAAGCATATATCT+AGG | + | Chr3:84494135-84494154 | MsG0380016510.01.T01:CDS | 30.0% | |
| TTGAGTATGATGAACTACTT+TGG | - | Chr3:84495205-84495224 | None:intergenic | 30.0% | |
| ! | AATATTGCCAGATTTTCTTC+AGG | + | Chr3:84494806-84494825 | MsG0380016510.01.T01:CDS | 30.0% |
| ! | CTTTTATGGGTTTATCACTA+CGG | + | Chr3:84494334-84494353 | MsG0380016510.01.T01:CDS | 30.0% |
| ! | TGATTACACGATACATCTTT+TGG | + | Chr3:84494613-84494632 | MsG0380016510.01.T01:CDS | 30.0% |
| ! | TTTTATGGGTTTATCACTAC+GGG | + | Chr3:84494335-84494354 | MsG0380016510.01.T01:CDS | 30.0% |
| !! | CTTCGTATATGGCTTTAATT+TGG | - | Chr3:84495421-84495440 | MsG0380016511.01.T01:CDS | 30.0% |
| !! | GGAATTAACTTGCAAAAAGA+TGG | + | Chr3:84494376-84494395 | MsG0380016510.01.T01:CDS | 30.0% |
| !! | TCTAAGATCAACCATGTTTT+CGG | + | Chr3:84494659-84494678 | MsG0380016510.01.T01:CDS | 30.0% |
| !!! | GTTTTGAGAACACCTTTTAT+GGG | + | Chr3:84494321-84494340 | MsG0380016510.01.T01:CDS | 30.0% |
| AACCTTTCAAAATCGGATCA+TGG | - | Chr3:84494304-84494323 | None:intergenic | 35.0% | |
| AGAAGAAAGTTGCATGGAAA+AGG | + | Chr3:84494543-84494562 | MsG0380016510.01.T01:CDS | 35.0% | |
| AGTATCAGAAGAAAGTTGCA+TGG | + | Chr3:84494537-84494556 | MsG0380016510.01.T01:CDS | 35.0% | |
| AGTGAAGCCTAATAATGAGT+CGG | + | Chr3:84494496-84494515 | MsG0380016510.01.T01:CDS | 35.0% | |
| ATTATGTCTGCAAATATGGC+AGG | + | Chr3:84495679-84495698 | MsG0380016510.01.T01:CDS | 35.0% | |
| ATTCAAGAGATGGTAGATGA+TGG | + | Chr3:84494683-84494702 | MsG0380016510.01.T01:CDS | 35.0% | |
| CAATGTCAAGCATATTGGAA+TGG | + | Chr3:84495496-84495515 | MsG0380016510.01.T01:CDS | 35.0% | |
| CATTGAACGATTGATCTGTA+TGG | + | Chr3:84494220-84494239 | MsG0380016510.01.T01:CDS | 35.0% | |
| CGTAGTGATAAACCCATAAA+AGG | - | Chr3:84494336-84494355 | None:intergenic | 35.0% | |
| GAGGAGATCACAAATTCAAT+TGG | + | Chr3:84494164-84494183 | MsG0380016510.01.T01:CDS | 35.0% | |
| TATGGAGATCGTTGAGAATA+TGG | + | Chr3:84494238-84494257 | MsG0380016510.01.T01:CDS | 35.0% | |
| TGTCCAAGCTGGTTAATTTA+TGG | + | Chr3:84494105-84494124 | MsG0380016510.01.T01:CDS | 35.0% | |
| TTATGTCTGCAAATATGGCA+GGG | + | Chr3:84495680-84495699 | MsG0380016510.01.T01:CDS | 35.0% | |
| TTGATTCATGTTCCTTCCAA+GGG | - | Chr3:84494978-84494997 | None:intergenic | 35.0% | |
| TTGCCATAAATTAACCAGCT+TGG | - | Chr3:84494111-84494130 | None:intergenic | 35.0% | |
| TTGCTCATAACATGATACGA+TGG | + | Chr3:84495529-84495548 | MsG0380016510.01.T01:CDS | 35.0% | |
| TTTCAAAGGATGTATGGCTT+GGG | + | Chr3:84495117-84495136 | MsG0380016510.01.T01:intron | 35.0% | |
| ! | ACAAAATCAGGCCCAATTTT+AGG | + | Chr3:84494920-84494939 | MsG0380016510.01.T01:CDS | 35.0% |
| ! | ATTGATTCATGTTCCTTCCA+AGG | - | Chr3:84494979-84494998 | None:intergenic | 35.0% |
| ! | CTAAGATCAACCATGTTTTC+GGG | + | Chr3:84494660-84494679 | MsG0380016510.01.T01:CDS | 35.0% |
| ! | GCATATATCTAGGTTGAAAG+AGG | + | Chr3:84494145-84494164 | MsG0380016510.01.T01:CDS | 35.0% |
| ! | GTTTAAGACACTCGAGTTAT+TGG | - | Chr3:84494714-84494733 | None:intergenic | 35.0% |
| ! | TAAAATTGGGCCTGATTTTG+TGG | - | Chr3:84494921-84494940 | None:intergenic | 35.0% |
| !!! | GGTTTTGAGAACACCTTTTA+TGG | + | Chr3:84494320-84494339 | MsG0380016510.01.T01:CDS | 35.0% |
| AAAGCCAGCATTTCTCATTC+AGG | + | Chr3:84494878-84494897 | MsG0380016510.01.T01:CDS | 40.0% | |
| AAAGCCATATACGAAGACCA+TGG | + | Chr3:84495425-84495444 | MsG0380016510.01.T01:CDS | 40.0% | |
| AAGCCTAATAATGAGTCGGA+TGG | + | Chr3:84494500-84494519 | MsG0380016510.01.T01:CDS | 40.0% | |
| AAGTCTGTATCAAGAGATGG+AGG | + | Chr3:84494442-84494461 | MsG0380016510.01.T01:CDS | 40.0% | |
| AATAATCACCGAGCTTCTTG+TGG | + | Chr3:84495650-84495669 | MsG0380016510.01.T01:CDS | 40.0% | |
| AATCATGGTTTCGTAGTCTG+TGG | + | Chr3:84494006-84494025 | MsG0380016510.01.T01:CDS | 40.0% | |
| AATGCAAGTGGCGTTCATTA+TGG | + | Chr3:84495169-84495188 | MsG0380016510.01.T01:intron | 40.0% | |
| ATAATCACCGAGCTTCTTGT+GGG | + | Chr3:84495651-84495670 | MsG0380016510.01.T01:CDS | 40.0% | |
| ATGCAAGTGGCGTTCATTAT+GGG | + | Chr3:84495170-84495189 | MsG0380016510.01.T01:intron | 40.0% | |
| ATTTCTCATTCAGGTCCTCT+TGG | + | Chr3:84494887-84494906 | MsG0380016510.01.T01:CDS | 40.0% | |
| CAAGCCATACATCCTTTGAA+AGG | - | Chr3:84495118-84495137 | None:intergenic | 40.0% | |
| CAAGTTAATTCCCACCCATA+TGG | - | Chr3:84494368-84494387 | None:intergenic | 40.0% | |
| CATAGTCGAATGACTCAAGT+TGG | + | Chr3:84495091-84495110 | MsG0380016510.01.T01:CDS | 40.0% | |
| CGAAGCAATGTCAAGCATAT+TGG | + | Chr3:84495491-84495510 | MsG0380016510.01.T01:CDS | 40.0% | |
| CGTATCATGTTATGAGCAAG+CGG | - | Chr3:84495528-84495547 | None:intergenic | 40.0% | |
| CTTTCAAAGGATGTATGGCT+TGG | + | Chr3:84495116-84495135 | MsG0380016510.01.T01:intron | 40.0% | |
| GTCAAGCATATTGGAATGGT+TGG | + | Chr3:84495500-84495519 | MsG0380016510.01.T01:CDS | 40.0% | |
| TCTCTTGAATCCCGAAAACA+TGG | - | Chr3:84494673-84494692 | None:intergenic | 40.0% | |
| TGATTCATGTTCCTTCCAAG+GGG | - | Chr3:84494977-84494996 | None:intergenic | 40.0% | |
| TGCAAGTCTGTATCAAGAGA+TGG | + | Chr3:84494439-84494458 | MsG0380016510.01.T01:CDS | 40.0% | |
| TGGACCTTTCAAAGGATGTA+TGG | + | Chr3:84495111-84495130 | MsG0380016510.01.T01:intron | 40.0% | |
| ! | AATTCTGAGAAGGAGGTGAT+TGG | + | Chr3:84494053-84494072 | MsG0380016510.01.T01:CDS | 40.0% |
| ! | AATTTTTACTCAGGTCCCCT+TGG | + | Chr3:84494959-84494978 | MsG0380016510.01.T01:CDS | 40.0% |
| ! | GCATGATGCTAATTCTGAGA+AGG | + | Chr3:84494043-84494062 | MsG0380016510.01.T01:CDS | 40.0% |
| ! | TGATGCTAATTCTGAGAAGG+AGG | + | Chr3:84494046-84494065 | MsG0380016510.01.T01:CDS | 40.0% |
| ! | TGCCATGATCCGATTTTGAA+AGG | + | Chr3:84494299-84494318 | MsG0380016510.01.T01:CDS | 40.0% |
| ! | TTTCTTTGAAAGCCTAGCCA+CGG | - | Chr3:84494279-84494298 | None:intergenic | 40.0% |
| !! | ACTCAAGTTGGACCTTTCAA+AGG | + | Chr3:84495103-84495122 | MsG0380016510.01.T01:CDS | 40.0% |
| !! | ATGGCTTTAATTTGGCCTTG+AGG | - | Chr3:84495413-84495432 | MsG0380016511.01.T01:CDS | 40.0% |
| !! | TGGCTTTAATTTGGCCTTGA+GGG | - | Chr3:84495412-84495431 | MsG0380016511.01.T01:CDS | 40.0% |
| !! | TGTTTTCGGGATTCAAGAGA+TGG | + | Chr3:84494673-84494692 | MsG0380016510.01.T01:CDS | 40.0% |
| AAACACTCTTCCGCCATAAC+TGG | + | Chr3:84495049-84495068 | MsG0380016510.01.T01:CDS | 45.0% | |
| AACACTCTTCCGCCATAACT+GGG | + | Chr3:84495050-84495069 | MsG0380016510.01.T01:CDS | 45.0% | |
| AAGGGGTCCTGAAGAAAATC+TGG | - | Chr3:84494816-84494835 | None:intergenic | 45.0% | |
| ACACAAGTCTTGCAGGAGAA+TGG | + | Chr3:84495466-84495485 | MsG0380016510.01.T01:CDS | 45.0% | |
| ACTACGGGTACAGATCCATA+TGG | + | Chr3:84494350-84494369 | MsG0380016510.01.T01:CDS | 45.0% | |
| AGGACCTGAATGAGAAATGC+TGG | - | Chr3:84494885-84494904 | None:intergenic | 45.0% | |
| AGTTTCCTTCCCAGTTATGG+CGG | - | Chr3:84495062-84495081 | None:intergenic | 45.0% | |
| ATTCAGACCCACAAGAAGCT+CGG | - | Chr3:84495661-84495680 | None:intergenic | 45.0% | |
| CGTTGAGAATATGGCACATG+TGG | + | Chr3:84494247-84494266 | MsG0380016510.01.T01:CDS | 45.0% | |
| CTACGGGTACAGATCCATAT+GGG | + | Chr3:84494351-84494370 | MsG0380016510.01.T01:CDS | 45.0% | |
| GAACGCCACTTGCATTTGAA+TGG | - | Chr3:84495165-84495184 | None:intergenic | 45.0% | |
| GAATTAGCATCATGCTTCCG+AGG | - | Chr3:84494038-84494057 | None:intergenic | 45.0% | |
| GACTGCCATTCAAATGCAAG+TGG | + | Chr3:84495157-84495176 | MsG0380016510.01.T01:intron | 45.0% | |
| GATGCCATGGTCTTCGTATA+TGG | - | Chr3:84495432-84495451 | MsG0380016511.01.T01:CDS | 45.0% | |
| GGAGCTCAATGCAAAATCTC+TGG | + | Chr3:84495701-84495720 | MsG0380016510.01.T01:CDS | 45.0% | |
| GGTGACTCATCCACAAAATC+AGG | + | Chr3:84494908-84494927 | MsG0380016510.01.T01:CDS | 45.0% | |
| GTACCAGCAGCACATTTGTT+CGG | - | Chr3:84495593-84495612 | None:intergenic | 45.0% | |
| GTCTGGGTAACATGTTGTAC+AGG | - | Chr3:84495377-84495396 | MsG0380016511.01.T01:CDS | 45.0% | |
| GTCTTTGACACAAGTCTTGC+AGG | + | Chr3:84495459-84495478 | MsG0380016510.01.T01:CDS | 45.0% | |
| GTGAGTTTCCTTCCCAGTTA+TGG | - | Chr3:84495065-84495084 | None:intergenic | 45.0% | |
| TACCAGCAGCACATTTGTTC+GGG | - | Chr3:84495592-84495611 | None:intergenic | 45.0% | |
| TGAATGGCAGTCAATGACAG+AGG | - | Chr3:84495149-84495168 | None:intergenic | 45.0% | |
| TGATAAAGCAGCTGCACCAA+GGG | - | Chr3:84495274-84495293 | None:intergenic | 45.0% | |
| TTTGTGGATGAGTCACCAAG+AGG | - | Chr3:84494905-84494924 | None:intergenic | 45.0% | |
| ! | AAAGACTGATGACGATGCCA+TGG | - | Chr3:84495445-84495464 | MsG0380016511.01.T01:CDS | 45.0% |
| ! | AGTTGCATGGAAAAGGCATG+AGG | + | Chr3:84494550-84494569 | MsG0380016510.01.T01:CDS | 45.0% |
| ! | CAAGAGATGGTAGATGATGG+TGG | + | Chr3:84494686-84494705 | MsG0380016510.01.T01:CDS | 45.0% |
| ACGTGTGAGAATTGCCCTCA+AGG | + | Chr3:84495395-84495414 | MsG0380016510.01.T01:CDS | 50.0% | |
| ACTTGCGGGATGTTTCTCTG+TGG | + | Chr3:84494579-84494598 | MsG0380016510.01.T01:CDS | 50.0% | |
| AGCAAGCTTGATGTCCAAGC+TGG | + | Chr3:84494094-84494113 | MsG0380016510.01.T01:CDS | 50.0% | |
| AGGGCAATTCTCACACGTCT+GGG | - | Chr3:84495393-84495412 | MsG0380016511.01.T01:CDS | 50.0% | |
| CATGGTTTCGTAGTCTGTGG+AGG | + | Chr3:84494009-84494028 | MsG0380016510.01.T01:CDS | 50.0% | |
| GCAAAATCTCTGGCAGAGTG+TGG | + | Chr3:84495711-84495730 | MsG0380016510.01.T01:CDS | 50.0% | |
| GCAGCTTCTCCACACTTGAT+CGG | + | Chr3:84495333-84495352 | MsG0380016510.01.T01:CDS | 50.0% | |
| GCATGAGGTGAAGAACTTGC+GGG | + | Chr3:84494565-84494584 | MsG0380016510.01.T01:CDS | 50.0% | |
| GCGCCATCCGACTCATTATT+AGG | - | Chr3:84494506-84494525 | None:intergenic | 50.0% | |
| GGCATGAGGTGAAGAACTTG+CGG | + | Chr3:84494564-84494583 | MsG0380016510.01.T01:CDS | 50.0% | |
| GGGATGTTTCTCTGTGGAAC+AGG | + | Chr3:84494585-84494604 | MsG0380016510.01.T01:CDS | 50.0% | |
| GGGTACAGATCCATATGGGT+GGG | + | Chr3:84494355-84494374 | MsG0380016510.01.T01:CDS | 50.0% | |
| GTGATAAAGCAGCTGCACCA+AGG | - | Chr3:84495275-84495294 | None:intergenic | 50.0% | |
| TTCCCGAACAAATGTGCTGC+TGG | + | Chr3:84495587-84495606 | MsG0380016510.01.T01:CDS | 50.0% | |
| TTTACTCAGGTCCCCTTGGA+AGG | + | Chr3:84494963-84494982 | MsG0380016510.01.T01:CDS | 50.0% | |
| ! | GGCAGAGTGTGGCAGTTTTA+GGG | + | Chr3:84495722-84495741 | MsG0380016510.01.T01:CDS | 50.0% |
| ! | TGGCAGAGTGTGGCAGTTTT+AGG | + | Chr3:84495721-84495740 | MsG0380016510.01.T01:CDS | 50.0% |
| !! | GATGGAGGTGCTTGTTGATC+TGG | + | Chr3:84494457-84494476 | MsG0380016510.01.T01:CDS | 50.0% |
| !!! | GAGTGTGGCAGTTTTAGGGT+TGG | + | Chr3:84495726-84495745 | MsG0380016510.01.T01:CDS | 50.0% |
| AACCCTCCACCTGAAACCCT+TGG | + | Chr3:84495255-84495274 | MsG0380016510.01.T01:CDS | 55.0% | |
| CGGGTACAGATCCATATGGG+TGG | + | Chr3:84494354-84494373 | MsG0380016510.01.T01:CDS | 55.0% | |
| CTCTTCCGCCATAACTGGGA+AGG | + | Chr3:84495054-84495073 | MsG0380016510.01.T01:CDS | 55.0% | |
| GAGGGCAATTCTCACACGTC+TGG | - | Chr3:84495394-84495413 | MsG0380016511.01.T01:CDS | 55.0% | |
| GTAGTCTGTGGAGGACTCCT+CGG | + | Chr3:84494018-84494037 | MsG0380016510.01.T01:CDS | 55.0% | |
| TGAAAGCCTAGCCACGGACT+CGG | - | Chr3:84494273-84494292 | None:intergenic | 55.0% | |
| ! | CACCAAGGGTTTCAGGTGGA+GGG | - | Chr3:84495260-84495279 | None:intergenic | 55.0% |
| GCAGCTGCACCAAGGGTTTC+AGG | - | Chr3:84495267-84495286 | None:intergenic | 60.0% | |
| GCGTCGAGACCGATCAAGTG+TGG | - | Chr3:84495345-84495364 | MsG0380016511.01.T01:CDS | 60.0% | |
| GCTGCACCAAGGGTTTCAGG+TGG | - | Chr3:84495264-84495283 | None:intergenic | 60.0% | |
| ! | GCACCAAGGGTTTCAGGTGG+AGG | - | Chr3:84495261-84495280 | None:intergenic | 60.0% |
| ATGTGGCCGAGTCCGTGGCT+AGG | + | Chr3:84494264-84494283 | MsG0380016510.01.T01:CDS | 65.0% | |
| GGCACATGTGGCCGAGTCCG+TGG | + | Chr3:84494259-84494278 | MsG0380016510.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 84493996 | 84495776 | 84493996 | ID=MsG0380016510.01;Name=MsG0380016510.01 |
| Chr3 | mRNA | 84493996 | 84495776 | 84493996 | ID=MsG0380016510.01.T01;Parent=MsG0380016510.01;Name=MsG0380016510.01.T01;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|0|0|2|0|559 |
| Chr3 | exon | 84493996 | 84495127 | 84493996 | ID=MsG0380016510.01.T01:exon:14359;Parent=MsG0380016510.01.T01 |
| Chr3 | exon | 84495229 | 84495776 | 84495229 | ID=MsG0380016510.01.T01:exon:14360;Parent=MsG0380016510.01.T01 |
| Chr3 | CDS | 84493996 | 84495127 | 84493996 | ID=MsG0380016510.01.T01:cds;Parent=MsG0380016510.01.T01 |
| Chr3 | CDS | 84495229 | 84495776 | 84495229 | ID=MsG0380016510.01.T01:cds;Parent=MsG0380016510.01.T01 |
| Gene Sequence |
| Protein sequence |
