AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006204.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006204.01.T01 MTR_2g438110 83.523 352 26 1 41 392 23 342 0.0 595
MsG0180006204.01.T01 MTR_2g039960 57.478 341 113 1 52 392 41 349 6.35e-140 405
MsG0180006204.01.T01 MTR_2g099620 56.140 342 118 1 51 392 24 333 1.72e-138 401
MsG0180006204.01.T01 MTR_2g099620 56.140 342 118 1 51 392 40 349 1.92e-138 401
MsG0180006204.01.T01 MTR_4g125970 57.185 341 114 1 52 392 41 349 7.35e-138 400
MsG0180006204.01.T01 MTR_4g125970 57.185 341 114 1 52 392 58 366 1.27e-137 400
MsG0180006204.01.T01 MTR_8g018400 55.718 341 119 1 52 392 41 349 2.20e-136 396
MsG0180006204.01.T01 MTR_1g046570 37.989 358 155 4 70 392 9 334 1.01e-74 238
MsG0180006204.01.T01 MTR_8g018370 38.907 311 133 5 84 392 5 260 5.31e-64 207
MsG0180006204.01.T01 MTR_7g076820 32.456 342 197 3 51 392 149 456 1.36e-59 202
MsG0180006204.01.T01 MTR_7g076800 32.164 342 198 3 51 392 140 447 1.64e-59 201
MsG0180006204.01.T01 MTR_7g076830 32.164 342 198 3 51 392 142 449 2.45e-59 201
MsG0180006204.01.T01 MTR_0915s0010 32.063 315 180 3 65 379 2 282 2.07e-54 181
MsG0180006204.01.T01 MTR_2g100230 28.818 347 207 4 50 389 94 407 6.04e-48 170
MsG0180006204.01.T01 MTR_7g109720 29.076 368 210 7 33 389 216 543 1.83e-44 164
MsG0180006204.01.T01 MTR_1g012420 31.073 354 205 7 45 392 38 358 3.12e-44 159
MsG0180006204.01.T01 MTR_3g107420 30.899 356 207 7 43 392 36 358 1.33e-43 157
MsG0180006204.01.T01 MTR_4g105100 29.714 350 208 3 50 393 200 517 3.31e-43 159
MsG0180006204.01.T01 MTR_4g010565 30.508 354 207 7 45 392 115 435 1.80e-42 155
MsG0180006204.01.T01 MTR_3g467550 27.887 355 206 7 50 388 115 435 4.34e-42 154
MsG0180006204.01.T01 MTR_4g105100 29.446 343 204 3 50 386 200 510 2.22e-41 153
MsG0180006204.01.T01 MTR_4g134170 26.536 358 237 5 40 388 275 615 2.70e-41 155
MsG0180006204.01.T01 MTR_3g467550 27.855 359 209 7 50 392 115 439 4.29e-41 152
MsG0180006204.01.T01 MTR_6g005320 26.257 358 236 6 40 388 237 575 7.00e-40 150
MsG0180006204.01.T01 MTR_4g049910 30.836 347 197 10 52 392 55 364 2.02e-39 146
MsG0180006204.01.T01 MTR_1g061970 30.000 350 208 10 52 392 80 401 4.36e-39 146
MsG0180006204.01.T01 MTR_3g467550 27.666 347 201 7 62 392 96 408 3.32e-38 144
MsG0180006204.01.T01 MTR_3g083690 28.455 369 211 7 42 388 133 470 3.37e-38 145
MsG0180006204.01.T01 MTR_5g090120 26.031 388 236 11 15 388 40 390 1.13e-37 144
MsG0180006204.01.T01 MTR_2g032630 28.261 368 222 7 31 389 472 806 7.62e-37 142
MsG0180006204.01.T01 MTR_4g114120 26.950 423 245 8 2 392 81 471 8.40e-37 142
MsG0180006204.01.T01 MTR_6g005550 27.920 351 204 9 50 389 163 475 6.39e-36 139
MsG0180006204.01.T01 MTR_3g449250 27.684 354 209 9 46 388 82 399 1.41e-35 137
MsG0180006204.01.T01 MTR_3g449250 27.684 354 209 9 46 388 82 399 1.61e-35 137
MsG0180006204.01.T01 MTR_1g054630 26.648 364 213 6 50 392 152 482 4.37e-35 136
MsG0180006204.01.T01 MTR_6g082080 26.023 342 217 5 50 388 8 316 1.75e-34 132
MsG0180006204.01.T01 MTR_7g056830 26.023 342 217 5 50 388 8 316 2.95e-34 132
MsG0180006204.01.T01 MTR_4g079320 26.744 344 212 6 51 388 18 327 5.92e-31 125
MsG0180006204.01.T01 MTR_1g095810 27.195 353 207 7 50 387 143 460 6.09e-31 124
MsG0180006204.01.T01 MTR_1g026830 26.912 353 208 8 50 387 145 462 3.77e-30 122
MsG0180006204.01.T01 MTR_6g033070 25.895 363 209 9 45 388 131 452 3.32e-29 119
MsG0180006204.01.T01 MTR_3g049990 26.816 358 217 7 41 388 140 462 3.98e-29 119
MsG0180006204.01.T01 MTR_2g007000 27.019 359 202 7 50 390 502 818 1.34e-28 118
MsG0180006204.01.T01 MTR_5g027840 25.641 351 215 5 50 388 102 418 1.80e-28 117
MsG0180006204.01.T01 MTR_2g066050 26.420 352 220 6 43 388 44 362 2.23e-27 114
MsG0180006204.01.T01 MTR_2g063080 24.703 421 247 11 17 390 77 474 4.47e-26 110
MsG0180006204.01.T01 MTR_6g039840 24.438 356 226 8 49 388 107 435 6.59e-26 110
MsG0180006204.01.T01 MTR_7g100820 26.346 353 218 6 48 393 126 443 8.23e-26 109
MsG0180006204.01.T01 MTR_3g071620 25.948 343 193 9 79 393 42 351 5.31e-25 107
MsG0180006204.01.T01 MTR_7g057250 23.919 393 229 10 52 388 163 541 2.48e-24 105
MsG0180006204.01.T01 MTR_2g055850 24.157 356 220 8 46 388 85 403 2.94e-24 105
MsG0180006204.01.T01 MTR_3g107420 32.828 198 127 5 43 235 36 232 5.90e-24 101
MsG0180006204.01.T01 MTR_8g027775 26.611 357 205 13 53 387 103 424 6.34e-24 103
MsG0180006204.01.T01 MTR_2g041140 25.905 359 220 8 41 388 129 452 7.35e-24 104
MsG0180006204.01.T01 MTR_4g112340 24.852 338 205 8 64 388 109 410 8.40e-24 103
MsG0180006204.01.T01 MTR_8g027780 26.611 357 205 12 53 387 107 428 8.80e-24 102
MsG0180006204.01.T01 MTR_8g027770 26.331 357 206 13 53 387 202 523 1.01e-23 103
MsG0180006204.01.T01 MTR_8g027780 26.519 362 209 12 53 392 107 433 2.50e-23 102
MsG0180006204.01.T01 MTR_8g018350 46.667 105 47 3 295 392 15 117 1.09e-22 94.4
MsG0180006204.01.T01 MTR_6g056080 26.741 359 205 12 48 389 102 419 2.08e-22 99.8
MsG0180006204.01.T01 MTR_1g102410 25.337 371 211 9 48 389 43 376 4.50e-21 95.5
MsG0180006204.01.T01 MTR_8g032230 34.058 138 90 1 50 186 8 145 8.36e-21 89.0
MsG0180006204.01.T01 MTR_4g077370 27.004 237 165 4 6 235 200 435 2.02e-20 92.8
MsG0180006204.01.T01 MTR_4g077370 30.159 189 103 5 52 232 2 169 6.65e-17 82.4
MsG0180006204.01.T01 MTR_5g092560 26.625 323 194 7 79 391 102 391 4.71e-20 92.8
MsG0180006204.01.T01 MTR_8g097000 22.740 365 209 12 53 387 289 610 6.98e-19 89.4
MsG0180006204.01.T01 MTR_4g068990 26.006 323 195 8 79 391 102 390 1.64e-18 88.2
MsG0180006204.01.T01 MTR_8g018330 40.385 104 56 2 295 392 15 118 9.49e-18 80.9
MsG0180006204.01.T01 MTR_1g083130 23.333 360 218 9 43 381 17 339 8.06e-17 82.8
MsG0180006204.01.T01 MTR_6g039840 24.820 278 175 7 118 388 9 259 8.16e-17 82.4
MsG0180006204.01.T01 MTR_4g459350 27.979 193 125 5 43 221 27 219 3.77e-16 78.6
MsG0180006204.01.T01 MTR_4g059460 27.979 193 125 5 43 221 30 222 1.99e-15 78.6
MsG0180006204.01.T01 MTR_2g043360 26.738 187 128 4 44 221 33 219 7.53e-15 76.6
MsG0180006204.01.T01 MTR_3g118120 23.592 373 217 10 49 387 129 467 4.54e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006204.01.T01 AT3G19760 74.716 352 57 1 41 392 25 344 0.0 548
MsG0180006204.01.T01 AT1G51380 65.625 352 89 1 41 392 12 331 1.52e-172 487
MsG0180006204.01.T01 AT1G51380 65.424 295 70 1 41 335 12 274 1.61e-141 404
MsG0180006204.01.T01 AT3G13920 57.310 342 114 1 51 392 29 338 3.65e-140 405
MsG0180006204.01.T01 AT3G13920 57.310 342 114 1 51 392 39 348 3.73e-140 405
MsG0180006204.01.T01 AT3G13920 57.310 342 114 1 51 392 43 352 1.99e-139 404
MsG0180006204.01.T01 AT3G13920 57.310 342 114 1 51 392 39 348 2.00e-139 404
MsG0180006204.01.T01 AT1G54270 56.433 342 117 1 51 392 39 348 6.90e-138 400
MsG0180006204.01.T01 AT1G72730 56.598 341 116 1 52 392 42 350 1.49e-136 397
MsG0180006204.01.T01 AT3G13920 56.140 342 113 2 51 392 39 343 6.07e-134 390
MsG0180006204.01.T01 AT1G54270 55.263 342 116 2 51 392 39 343 1.73e-131 383
MsG0180006204.01.T01 AT1G51380 63.780 254 60 1 41 294 12 233 4.32e-113 332
MsG0180006204.01.T01 AT1G51380 63.780 254 60 1 41 294 12 233 9.66e-113 332
MsG0180006204.01.T01 AT4G00660 33.235 340 193 3 53 392 133 438 1.07e-61 207
MsG0180006204.01.T01 AT4G00660 33.235 340 193 3 53 392 133 438 1.07e-61 207
MsG0180006204.01.T01 AT3G61240 33.531 337 190 4 53 389 126 428 2.14e-60 203
MsG0180006204.01.T01 AT3G61240 33.531 337 190 4 53 389 126 428 2.14e-60 203
MsG0180006204.01.T01 AT2G45810 32.344 337 194 3 53 389 156 458 3.17e-58 198
MsG0180006204.01.T01 AT1G55150 30.659 349 198 6 50 389 123 436 4.43e-49 174
MsG0180006204.01.T01 AT1G55150 30.659 349 198 6 50 389 98 411 4.47e-49 173
MsG0180006204.01.T01 AT3G53110 30.747 348 203 8 53 392 93 410 2.34e-45 163
MsG0180006204.01.T01 AT5G11170 30.791 354 206 7 45 392 38 358 1.90e-43 157
MsG0180006204.01.T01 AT5G11200 30.791 354 206 7 45 392 38 358 1.90e-43 157
MsG0180006204.01.T01 AT2G33730 27.451 357 235 3 40 388 302 642 1.32e-42 159
MsG0180006204.01.T01 AT5G63120 28.857 350 211 3 50 393 164 481 1.84e-42 157
MsG0180006204.01.T01 AT2G47330 28.775 351 202 6 50 389 227 540 5.12e-42 157
MsG0180006204.01.T01 AT3G01540 30.636 346 201 6 50 389 157 469 7.48e-42 155
MsG0180006204.01.T01 AT3G01540 30.636 346 201 6 50 389 157 469 7.48e-42 155
MsG0180006204.01.T01 AT3G01540 30.636 346 201 6 50 389 157 469 7.48e-42 155
MsG0180006204.01.T01 AT5G14610 29.769 346 204 6 50 389 168 480 7.63e-42 154
MsG0180006204.01.T01 AT3G01540 30.636 346 201 6 50 389 157 469 7.94e-42 155
MsG0180006204.01.T01 AT3G06480 30.636 346 197 6 52 389 436 746 1.39e-41 156
MsG0180006204.01.T01 AT3G06480 30.636 346 197 6 52 389 436 746 5.79e-41 155
MsG0180006204.01.T01 AT5G14610 29.769 346 204 6 50 389 168 480 1.27e-40 152
MsG0180006204.01.T01 AT5G14610 29.769 346 204 6 50 389 160 472 1.87e-40 152
MsG0180006204.01.T01 AT5G14610 29.769 346 204 6 50 389 160 472 1.88e-40 152
MsG0180006204.01.T01 AT5G63120 28.329 353 215 3 40 386 154 474 1.88e-40 150
MsG0180006204.01.T01 AT5G63120 28.329 353 215 3 40 386 154 474 1.88e-40 150
MsG0180006204.01.T01 AT5G63120 28.329 353 215 3 40 386 154 474 1.88e-40 150
MsG0180006204.01.T01 AT5G63120 28.571 343 207 3 50 386 164 474 1.92e-40 150
MsG0180006204.01.T01 AT5G11200 29.504 383 232 11 45 392 38 417 1.73e-38 144
MsG0180006204.01.T01 AT5G11200 29.412 374 226 11 45 392 38 399 1.94e-38 144
MsG0180006204.01.T01 AT3G22330 27.666 347 204 9 52 388 105 414 5.00e-38 145
MsG0180006204.01.T01 AT2G42520 28.291 357 208 7 50 388 158 484 1.46e-37 144
MsG0180006204.01.T01 AT2G42520 28.291 357 208 7 50 388 158 484 1.46e-37 144
MsG0180006204.01.T01 AT2G42520 28.291 357 208 7 50 388 158 484 1.46e-37 144
MsG0180006204.01.T01 AT5G26742 30.769 325 173 9 79 388 129 416 1.48e-37 144
MsG0180006204.01.T01 AT5G26742 30.769 325 173 9 79 388 129 416 1.49e-37 144
MsG0180006204.01.T01 AT5G26742 30.556 324 173 9 80 388 37 323 5.85e-37 142
MsG0180006204.01.T01 AT5G14610 29.394 330 194 6 66 389 45 341 6.11e-37 140
MsG0180006204.01.T01 AT5G14610 29.394 330 194 6 66 389 45 341 6.11e-37 140
MsG0180006204.01.T01 AT3G22310 26.822 343 206 6 55 388 120 426 8.37e-37 141
MsG0180006204.01.T01 AT3G22310 26.822 343 206 6 55 388 120 426 9.43e-37 141
MsG0180006204.01.T01 AT5G14610 29.518 332 195 6 64 389 242 540 2.40e-36 140
MsG0180006204.01.T01 AT3G58510 28.142 366 213 7 42 388 140 474 1.24e-35 138
MsG0180006204.01.T01 AT3G58510 28.142 366 213 7 42 388 140 474 1.24e-35 138
MsG0180006204.01.T01 AT3G58510 28.142 366 213 7 42 388 140 474 1.24e-35 138
MsG0180006204.01.T01 AT5G60990 26.989 352 211 6 50 388 8 326 1.14e-34 133
MsG0180006204.01.T01 AT5G11170 29.642 307 179 6 90 392 2 275 1.14e-34 131
MsG0180006204.01.T01 AT3G58570 26.536 358 213 6 50 388 145 471 2.72e-34 134
MsG0180006204.01.T01 AT1G77030 25.882 340 216 4 53 388 30 337 3.25e-33 132
MsG0180006204.01.T01 AT3G09720 29.345 351 206 7 50 393 136 451 1.69e-32 128
MsG0180006204.01.T01 AT3G09720 29.345 351 206 7 50 393 136 451 1.69e-32 128
MsG0180006204.01.T01 AT4G33370 28.612 353 202 8 50 387 96 413 2.30e-32 128
MsG0180006204.01.T01 AT5G51280 28.895 353 201 8 50 387 145 462 2.20e-31 125
MsG0180006204.01.T01 AT1G12770 24.936 389 224 7 49 390 108 475 1.00e-30 124
MsG0180006204.01.T01 AT1G12770 24.936 389 224 7 49 390 108 475 1.00e-30 124
MsG0180006204.01.T01 AT1G20920 27.042 355 207 7 50 390 190 506 1.22e-30 124
MsG0180006204.01.T01 AT1G31970 26.158 367 213 8 43 388 103 432 4.92e-30 121
MsG0180006204.01.T01 AT1G28180 27.586 319 184 8 81 388 2 284 8.39e-30 118
MsG0180006204.01.T01 AT3G02065 23.932 351 220 6 50 388 109 424 1.37e-29 120
MsG0180006204.01.T01 AT3G02065 23.932 351 220 6 50 388 109 424 1.37e-29 120
MsG0180006204.01.T01 AT1G20920 27.042 355 207 7 50 390 528 844 3.73e-29 120
MsG0180006204.01.T01 AT1G20920 27.042 355 207 7 50 390 528 844 3.73e-29 120
MsG0180006204.01.T01 AT1G20920 27.042 355 207 7 50 390 528 844 3.73e-29 120
MsG0180006204.01.T01 AT1G20920 27.042 355 207 7 50 390 528 844 3.73e-29 120
MsG0180006204.01.T01 AT1G20920 27.042 355 207 7 50 390 528 844 3.73e-29 120
MsG0180006204.01.T01 AT1G20920 27.042 355 207 7 50 390 528 844 3.73e-29 120
MsG0180006204.01.T01 AT3G18600 24.859 354 220 6 45 388 83 400 9.13e-29 118
MsG0180006204.01.T01 AT1G16280 27.762 353 212 10 44 388 51 368 2.77e-28 116
MsG0180006204.01.T01 AT4G16630 26.330 376 224 6 20 388 149 478 7.02e-28 116
MsG0180006204.01.T01 AT5G63630 26.741 359 202 14 53 387 56 377 6.09e-27 112
MsG0180006204.01.T01 AT5G08620 26.000 400 242 15 13 392 43 408 1.06e-26 112
MsG0180006204.01.T01 AT5G05450 24.860 358 212 8 55 388 20 344 2.16e-26 111
MsG0180006204.01.T01 AT5G63630 26.741 359 202 14 53 387 250 571 3.93e-26 110
MsG0180006204.01.T01 AT5G65900 24.928 349 213 6 51 387 154 465 4.81e-26 110
MsG0180006204.01.T01 AT5G08610 27.041 392 218 15 32 392 356 710 7.46e-26 110
MsG0180006204.01.T01 AT5G62190 26.171 363 202 9 48 389 96 413 5.84e-25 107
MsG0180006204.01.T01 AT3G02065 23.676 321 198 6 80 388 2 287 7.58e-25 104
MsG0180006204.01.T01 AT1G71370 24.860 358 219 9 48 388 11 335 2.07e-24 105
MsG0180006204.01.T01 AT4G09730 23.037 382 249 8 24 388 85 438 2.73e-23 102
MsG0180006204.01.T01 AT5G54910 24.929 353 220 8 49 391 69 386 1.02e-22 100
MsG0180006204.01.T01 AT1G63250 25.600 375 209 12 42 387 319 652 9.66e-22 97.8
MsG0180006204.01.T01 AT3G09620 25.352 355 184 9 50 390 396 683 4.00e-21 96.3
MsG0180006204.01.T01 AT2G07750 25.131 382 202 12 42 387 366 699 4.16e-21 95.9
MsG0180006204.01.T01 AT3G09620 25.352 355 184 9 50 390 395 682 4.30e-21 96.3
MsG0180006204.01.T01 AT4G34910 24.786 351 210 10 49 380 44 359 1.12e-20 94.4
MsG0180006204.01.T01 AT1G71280 24.198 343 190 9 58 388 24 308 3.11e-20 91.3
MsG0180006204.01.T01 AT1G71280 24.198 343 190 9 58 388 24 308 2.73e-19 89.7
MsG0180006204.01.T01 AT3G16840 23.342 377 234 11 62 390 201 570 2.14e-18 87.8
MsG0180006204.01.T01 AT3G16840 23.342 377 234 11 62 390 202 571 2.22e-18 87.8
MsG0180006204.01.T01 AT3G06980 23.873 377 216 10 46 387 369 709 4.25e-17 84.0
MsG0180006204.01.T01 AT2G40700 27.835 194 131 5 37 221 16 209 1.29e-14 75.9
MsG0180006204.01.T01 AT4G15850 24.859 354 192 14 89 389 73 405 3.80e-14 74.3
MsG0180006204.01.T01 AT1G28180 30.769 117 72 2 81 188 2 118 6.86e-12 62.8

Find 83 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAACTGAAAATGTTATTT+TGG 0.151334 1:-101317734 MsG0180006204.01.T01:CDS
CTACTTAGCAAAGTTGTAAT+TGG 0.214897 1:+101317315 None:intergenic
TACGCTACCTCATGAAATTT+TGG 0.254057 1:-101316871 MsG0180006204.01.T01:CDS
TGACAGTAGAAGAAAGGTTT+AGG 0.287979 1:+101322006 None:intergenic
TGCCGTTCTACCTATCATTC+AGG 0.291705 1:-101321833 MsG0180006204.01.T01:CDS
AAGAGAAAGAGATGCAATTA+TGG 0.315960 1:-101316398 MsG0180006204.01.T01:CDS
TATTGATAACGACTGATGTT+TGG 0.325693 1:-101316348 MsG0180006204.01.T01:CDS
ATATCTCCCTCCGGATCTTC+AGG 0.332541 1:-101317400 MsG0180006204.01.T01:CDS
GACAGTAGAAGAAAGGTTTA+GGG 0.333950 1:+101322007 None:intergenic
TTGTAATTTGAACAGGTTGC+AGG 0.352767 1:-101317791 MsG0180006204.01.T01:intron
ATTGCATCTCTTTCTCTTTG+AGG 0.376417 1:+101316403 None:intergenic
GATTGCTCTCACTGTTTGCC+AGG 0.377469 1:-101321761 MsG0180006204.01.T01:CDS
ATTGATAACGACTGATGTTT+GGG 0.390146 1:-101316347 MsG0180006204.01.T01:CDS
TGTGTCTCCGACAAGGGAAT+TGG 0.408057 1:-101317761 MsG0180006204.01.T01:CDS
AGCAATCATGGAGGACTTGC+CGG 0.434474 1:+101321777 None:intergenic
ACGTCACGACCCTGAATGAT+AGG 0.436959 1:+101321823 None:intergenic
GGAGTGTGTCAAATGGGATC+AGG 0.440632 1:-101322256 MsG0180006204.01.T01:CDS
CATGTAGTGTCGGGGACTCC+TGG 0.441130 1:-101317622 MsG0180006204.01.T01:CDS
ATCAGCTGGAGTGTGTCAAA+TGG 0.444615 1:-101322263 MsG0180006204.01.T01:CDS
TGTGAGGCCAATTCCCTTGT+CGG 0.444766 1:+101317754 None:intergenic
AAGGTTTCTCAAAACCGTAT+TGG 0.451081 1:+101321872 None:intergenic
GTCATCGCTCAGTCTCAATC+TGG 0.453284 1:-101321802 MsG0180006204.01.T01:CDS
CTACTGTCACTCAGCGGCTA+TGG 0.454362 1:-101321992 MsG0180006204.01.T01:CDS
CCTCATGATTACAGGGCATC+AGG 0.461625 1:-101316716 MsG0180006204.01.T01:intron
CTGCGTGGAATTTACCAATA+CGG 0.462856 1:-101321886 MsG0180006204.01.T01:CDS
CACGGAGTTCATGTAGTGTC+GGG 0.464753 1:-101317631 MsG0180006204.01.T01:CDS
CGTCATGCCACGTCATCAGC+TGG 0.466171 1:-101322277 None:intergenic
GTTTAGGGTTTCTATCAAGT+TGG 0.471948 1:+101322022 None:intergenic
GCAAACAGTGAGAGCAATCA+TGG 0.475280 1:+101321765 None:intergenic
ACGACTGATGTTTGGGCTCG+TGG 0.476458 1:-101316340 MsG0180006204.01.T01:CDS
CGAGCACATGCATGCATTGG+AGG 0.480977 1:-101317688 MsG0180006204.01.T01:CDS
GCTCAGTCTCAATCTGGAAC+CGG 0.482872 1:-101321796 MsG0180006204.01.T01:CDS
TAGAACGGCACGCTGTTGAA+TGG 0.489358 1:+101321846 None:intergenic
AGCTATCAAGTTGCTTGTGC+TGG 0.499944 1:-101317557 MsG0180006204.01.T01:intron
TCACTCAGCGGCTATGGCTA+TGG 0.502793 1:-101321986 MsG0180006204.01.T01:CDS
TCAGCTGGAGTGTGTCAAAT+GGG 0.504942 1:-101322262 MsG0180006204.01.T01:CDS
ATAAAATGACAGAGAAGGTA+AGG 0.506376 1:+101317373 None:intergenic
GTAAGGTGAACCTGAAGATC+CGG 0.506742 1:+101317390 None:intergenic
AAGAGGAACTCACTCTTTGA+CGG 0.515459 1:+101321726 None:intergenic
GATTCAGAGCTTCGATGAGA+TGG 0.519793 1:-101321926 MsG0180006204.01.T01:CDS
TGCATTGGAGGCAAAAGCGT+TGG 0.520539 1:-101317676 MsG0180006204.01.T01:CDS
GAGTGTGTCAAATGGGATCA+GGG 0.523781 1:-101322255 MsG0180006204.01.T01:CDS
GCCGTTCTACCTATCATTCA+GGG 0.525768 1:-101321832 MsG0180006204.01.T01:CDS
GAGTCCTTGACATGATCAAA+AGG 0.531974 1:-101317597 MsG0180006204.01.T01:CDS
TTATGTTGATGTTGAAAGGG+AGG 0.536096 1:-101316688 MsG0180006204.01.T01:CDS
ATTCAGAGCTTCGATGAGAT+GGG 0.537585 1:-101321925 MsG0180006204.01.T01:CDS
TTTAATTGTGTCTCCGACAA+GGG 0.538538 1:-101317767 MsG0180006204.01.T01:CDS
CTTTAATTGTGTCTCCGACA+AGG 0.539027 1:-101317768 MsG0180006204.01.T01:CDS
GCACGCTGTTGAATGGATGA+AGG 0.539674 1:+101321853 None:intergenic
ATACGAGCACATGCATGCAT+TGG 0.549970 1:-101317691 MsG0180006204.01.T01:CDS
TCAAAGCTTCGAGACATCGA+AGG 0.553831 1:-101321959 MsG0180006204.01.T01:CDS
TCGTGGACTTGATGTACAGC+AGG 0.556397 1:-101316323 MsG0180006204.01.T01:CDS
ATCATGTCAAGGACTCGGCC+AGG 0.564010 1:+101317604 None:intergenic
TCCAAATAAAATGACAGAGA+AGG 0.566268 1:+101317368 None:intergenic
GCTGAGTGACAGTAGAAGAA+AGG 0.568231 1:+101322000 None:intergenic
ACGTGATGAATTGACATTGG+AGG 0.580038 1:-101316802 MsG0180006204.01.T01:intron
ATTATGGATGAATTTCGTGC+TGG 0.582575 1:-101316382 MsG0180006204.01.T01:CDS
AAAACGTGATGAATTGACAT+TGG 0.590799 1:-101316805 MsG0180006204.01.T01:CDS
ACACGGAGTTCATGTAGTGT+CGG 0.591877 1:-101317632 MsG0180006204.01.T01:CDS
TTGATGTTGAAAGGGAGGAA+TGG 0.599804 1:-101316683 MsG0180006204.01.T01:CDS
TTCACTATCTCATCAATGCA+CGG 0.607282 1:-101316433 MsG0180006204.01.T01:CDS
GTCATCTCCAAAATTTCATG+AGG 0.612581 1:+101316864 None:intergenic
ATTCTGTAACACCAAGCGAA+AGG 0.615167 1:-101316604 MsG0180006204.01.T01:intron
TGTGTATAGATATCTCCCTC+CGG 0.617507 1:-101317409 MsG0180006204.01.T01:CDS
GAATATAACAGCTTGAGTGA+TGG 0.627409 1:+101316623 None:intergenic
ACACACTCCAGCTGATGACG+TGG 0.635646 1:+101322270 None:intergenic
ACCCTGAATGATAGGTAGAA+CGG 0.644492 1:+101321831 None:intergenic
TTTGCTAAGTAGACTTCACA+AGG 0.647584 1:-101317304 MsG0180006204.01.T01:intron
TGACGGAGGTATCAACAACC+TGG 0.647609 1:+101321743 None:intergenic
CAAAGCTTCGAGACATCGAA+GGG 0.648344 1:-101321958 MsG0180006204.01.T01:CDS
AGGTGAACCTGAAGATCCGG+AGG 0.649252 1:+101317393 None:intergenic
AGTGTGTCAAATGGGATCAG+GGG 0.652321 1:-101322254 MsG0180006204.01.T01:CDS
AGGAACTCACTCTTTGACGG+AGG 0.657463 1:+101321729 None:intergenic
GTGTGTCAAATGGGATCAGG+GGG 0.662224 1:-101322253 MsG0180006204.01.T01:intron
ATCAAAGACGATTTACTGCG+TGG 0.662617 1:-101321901 MsG0180006204.01.T01:CDS
AAAGCGTTGGAGAAGACACA+AGG 0.685686 1:-101317663 MsG0180006204.01.T01:CDS
ACGGAGTTCATGTAGTGTCG+GGG 0.690010 1:-101317630 MsG0180006204.01.T01:CDS
GACACAAGGAAACTTGAACA+CGG 0.692105 1:-101317649 MsG0180006204.01.T01:CDS
TCTGATGAAATGCTGAGCAG+AGG 0.698342 1:-101317453 MsG0180006204.01.T01:CDS
GGTGAACCTGAAGATCCGGA+GGG 0.711398 1:+101317394 None:intergenic
AGTTTATGACAGATCCTGTG+AGG 0.717164 1:-101316836 MsG0180006204.01.T01:CDS
TTTCTTCTACTGTCACTCAG+CGG 0.724602 1:-101321998 MsG0180006204.01.T01:CDS
AACAGTGAGAGCAATCATGG+AGG 0.733411 1:+101321768 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTAATT+TGG - Chr1:101319614-101319633 MsG0180006204.01.T01:intron 0.0%
!!! TTTTACTTATATTACTTTTT+AGG - Chr1:101319462-101319481 MsG0180006204.01.T01:intron 10.0%
!! AAGGTAAATGAAAATTATAA+AGG - Chr1:101322000-101322019 MsG0180006204.01.T01:CDS 15.0%
!! AATTTCTATGTAATTTACTT+AGG - Chr1:101317961-101317980 MsG0180006204.01.T01:intron 15.0%
!! AGTAAATTACATAGAAATTA+TGG + Chr1:101317960-101317979 None:intergenic 15.0%
!! ATATTTGATAAAAATGAGTT+CGG - Chr1:101318794-101318813 MsG0180006204.01.T01:intron 15.0%
!! CTTTAATATATCTTTGAATA+AGG - Chr1:101317183-101317202 MsG0180006204.01.T01:intron 15.0%
!! TCAAATTACAAAATTTCAAT+CGG + Chr1:101320785-101320804 None:intergenic 15.0%
!!! AATGTACTTATTTTAAAACA+TGG - Chr1:101320466-101320485 MsG0180006204.01.T01:intron 15.0%
!!! ATTGTTTAATTTTAATGTGT+AGG - Chr1:101321675-101321694 MsG0180006204.01.T01:intron 15.0%
!!! GCTTTTAAAATATAATTTGT+GGG + Chr1:101318009-101318028 None:intergenic 15.0%
!!! TATACTTGATTTTTGAATTT+CGG + Chr1:101318673-101318692 None:intergenic 15.0%
!!! TATATTTTCTTTTTTATTGC+AGG - Chr1:101321104-101321123 MsG0180006204.01.T01:intron 15.0%
!!! TGCTTTTAAAATATAATTTG+TGG + Chr1:101318010-101318029 None:intergenic 15.0%
!! AAAATGATTAAAGATAGTGA+CGG + Chr1:101320066-101320085 None:intergenic 20.0%
!! AAGCTAGATTAATAATTTGA+TGG + Chr1:101319328-101319347 None:intergenic 20.0%
!! AATAAATTTCATAAGTCAAG+AGG - Chr1:101320629-101320648 MsG0180006204.01.T01:intron 20.0%
!! AATCAATTCAATATCTCATA+TGG + Chr1:101319160-101319179 None:intergenic 20.0%
!! AATTTGTCTGAATTAGAAAT+TGG + Chr1:101321316-101321335 None:intergenic 20.0%
!! ACAAATTTAGGTGATAAATA+GGG - Chr1:101321329-101321348 MsG0180006204.01.T01:intron 20.0%
!! ACATTCTTTGGATTTATTAT+TGG + Chr1:101316460-101316479 None:intergenic 20.0%
!! ATAAATTTCATAAGTCAAGA+GGG - Chr1:101320630-101320649 MsG0180006204.01.T01:intron 20.0%
!! ATAATAAATCCAAAGAATGT+TGG - Chr1:101316460-101316479 MsG0180006204.01.T01:CDS 20.0%
!! ATCACTTAAAAATACACTTA+AGG + Chr1:101318991-101319010 None:intergenic 20.0%
!! ATTTGAATAAGGAATGTATT+TGG - Chr1:101319129-101319148 MsG0180006204.01.T01:intron 20.0%
!! CACAAAAAAATAGATGAATA+TGG - Chr1:101318758-101318777 MsG0180006204.01.T01:intron 20.0%
!! CATTCTTTGGATTTATTATT+GGG + Chr1:101316459-101316478 None:intergenic 20.0%
!! CTGTCTATAAATATAAAAAG+CGG - Chr1:101316516-101316535 MsG0180006204.01.T01:intron 20.0%
!! GAAAATTATAAAGGTTCTTT+AGG - Chr1:101322009-101322028 MsG0180006204.01.T01:CDS 20.0%
!! GACTTATGAAATTTATTGAT+AGG + Chr1:101320626-101320645 None:intergenic 20.0%
!! GTAATATAAGTAAAACATGA+AGG + Chr1:101319457-101319476 None:intergenic 20.0%
!! TTATATTTACATATGGTGAT+TGG - Chr1:101322070-101322089 MsG0180006204.01.T01:intron 20.0%
!! TTTCTAATTCAGACAAATTT+AGG - Chr1:101321317-101321336 MsG0180006204.01.T01:intron 20.0%
!!! AAAATGTTATTTTGGCAATT+GGG - Chr1:101320859-101320878 MsG0180006204.01.T01:intron 20.0%
!!! AAGTTTTAGGTTGAATTTAT+TGG - Chr1:101316936-101316955 MsG0180006204.01.T01:intron 20.0%
!!! AATTTATTTTACCACTTACT+CGG + Chr1:101318333-101318352 None:intergenic 20.0%
!!! AATTTTATGTTGATGTTGAA+AGG - Chr1:101321893-101321912 MsG0180006204.01.T01:CDS 20.0%
!!! ACAAACTGAAAATGTTATTT+TGG - Chr1:101320851-101320870 MsG0180006204.01.T01:intron 20.0%
!!! ATGAAGGAAATTCATTTTTT+TGG - Chr1:101318076-101318095 MsG0180006204.01.T01:intron 20.0%
!!! ATGAGAGTTTTAATTTTCTT+TGG - Chr1:101318504-101318523 MsG0180006204.01.T01:intron 20.0%
!!! ATTGGTTATATATATCCTTT+TGG - Chr1:101322088-101322107 MsG0180006204.01.T01:intron 20.0%
!!! ATTTTATGTTGATGTTGAAA+GGG - Chr1:101321894-101321913 MsG0180006204.01.T01:CDS 20.0%
!!! CTAGTCTTTATATTTACATA+TGG - Chr1:101322063-101322082 MsG0180006204.01.T01:intron 20.0%
!!! GAAAAAAGTGTTAATGAATA+TGG - Chr1:101318822-101318841 MsG0180006204.01.T01:intron 20.0%
!!! GTAAGTGGTAAAATAAATTT+TGG - Chr1:101318334-101318353 MsG0180006204.01.T01:intron 20.0%
!!! TAACCTTATTTCTTAAATCT+AGG + Chr1:101317032-101317051 None:intergenic 20.0%
!!! TATTTTAAAAGCAGACTAAT+TGG - Chr1:101318017-101318036 MsG0180006204.01.T01:intron 20.0%
!!! TGAAATTTGTATTAGTTTTG+CGG - Chr1:101318439-101318458 MsG0180006204.01.T01:intron 20.0%
!!! TGAAATTTTGTAATTTGAAC+AGG - Chr1:101320787-101320806 MsG0180006204.01.T01:intron 20.0%
!!! TGAAGTTTTTTACTTTCTTT+AGG - Chr1:101316976-101316995 MsG0180006204.01.T01:intron 20.0%
!!! TGAGAGTTTTAATTTTCTTT+GGG - Chr1:101318505-101318524 MsG0180006204.01.T01:intron 20.0%
!!! TGTTTTTTTTTCAACAACTT+TGG + Chr1:101318895-101318914 None:intergenic 20.0%
!!! TTTTAAACATTTTGTCACTA+GGG + Chr1:101317445-101317464 None:intergenic 20.0%
!!! TTTTCATAATGAGAAACTAA+AGG - Chr1:101318166-101318185 MsG0180006204.01.T01:intron 20.0%
! AAGCATACAATAAGCTATAT+AGG + Chr1:101320203-101320222 None:intergenic 25.0%
! ACAAAAAAAAAAAGAGTTGC+GGG - Chr1:101318845-101318864 MsG0180006204.01.T01:intron 25.0%
! ACAGTCAAAACACTAAAAAA+TGG - Chr1:101318531-101318550 MsG0180006204.01.T01:intron 25.0%
! ACCTCAATTTATAACTTAGT+TGG - Chr1:101321539-101321558 MsG0180006204.01.T01:intron 25.0%
! AGTTAAATATCAGAAAACAC+AGG + Chr1:101321828-101321847 None:intergenic 25.0%
! ATATTGAGAACAAAGCTAAA+AGG - Chr1:101317630-101317649 MsG0180006204.01.T01:CDS 25.0%
! ATGAATATGTTGTCTTCATT+TGG - Chr1:101321479-101321498 MsG0180006204.01.T01:intron 25.0%
! ATTGGAAGACTGAAATTTAT+AGG - Chr1:101317212-101317231 MsG0180006204.01.T01:intron 25.0%
! CAGCAATTGCAAATTAAATA+TGG - Chr1:101317810-101317829 MsG0180006204.01.T01:intron 25.0%
! GACAAAAAAAAAAAGAGTTG+CGG - Chr1:101318844-101318863 MsG0180006204.01.T01:intron 25.0%
! GACAAATTTAGGTGATAAAT+AGG - Chr1:101321328-101321347 MsG0180006204.01.T01:intron 25.0%
! GAGAAAATATTTCAAGACAT+GGG - Chr1:101319670-101319689 MsG0180006204.01.T01:intron 25.0%
! GTTATGTTTCAATTAGCATT+CGG - Chr1:101316903-101316922 MsG0180006204.01.T01:intron 25.0%
! TCAAAATCCAAAATTGGATT+TGG - Chr1:101319924-101319943 MsG0180006204.01.T01:intron 25.0%
! TCCAACTAAGTTATAAATTG+AGG + Chr1:101321543-101321562 None:intergenic 25.0%
! TGACCTAGATTTAAGAAATA+AGG - Chr1:101317026-101317045 MsG0180006204.01.T01:intron 25.0%
! TGAGAAAATATTTCAAGACA+TGG - Chr1:101319669-101319688 MsG0180006204.01.T01:intron 25.0%
! TGTTGTCACAAATAGAAATA+AGG + Chr1:101320159-101320178 None:intergenic 25.0%
! TTCAGGTCATAAAATATTCA+TGG + Chr1:101319085-101319104 None:intergenic 25.0%
! TTGTGATCATATGATGATAA+GGG + Chr1:101317297-101317316 None:intergenic 25.0%
! TTGTGCAGAAAATTAATTGT+AGG + Chr1:101318743-101318762 None:intergenic 25.0%
! TTTGACTCAACTTTCTAATA+GGG - Chr1:101319884-101319903 MsG0180006204.01.T01:intron 25.0%
!! AAAACTAGAGGTAATTTTGT+AGG + Chr1:101319986-101320005 None:intergenic 25.0%
!! AATAACATTTTCAGTTTGTG+AGG + Chr1:101320850-101320869 None:intergenic 25.0%
!! AATCAATAGAGGGTAATTTT+GGG - Chr1:101319485-101319504 MsG0180006204.01.T01:intron 25.0%
!! TAATTTTCTCTGAATGCTAA+TGG - Chr1:101320666-101320685 MsG0180006204.01.T01:intron 25.0%
!! TAGGTTGAATTTATTGGTTA+GGG - Chr1:101316942-101316961 MsG0180006204.01.T01:intron 25.0%
!! TGTGTTTTCTGATATTTAAC+TGG - Chr1:101321827-101321846 MsG0180006204.01.T01:CDS 25.0%
!!! ACTTTTTAGGAATCAATAGA+GGG - Chr1:101319475-101319494 MsG0180006204.01.T01:intron 25.0%
!!! ATTTTGACTTTCTTCAAATG+TGG - Chr1:101318630-101318649 MsG0180006204.01.T01:intron 25.0%
!!! CGAAAGAATTTTTTTACAGT+GGG - Chr1:101316390-101316409 MsG0180006204.01.T01:CDS 25.0%
!!! GAAAATGTTATTTTGGCAAT+TGG - Chr1:101320858-101320877 MsG0180006204.01.T01:intron 25.0%
!!! GGATTTTAACATAAAACTAG+AGG + Chr1:101319998-101320017 None:intergenic 25.0%
!!! GTTTTAAACATTTTGTCACT+AGG + Chr1:101317446-101317465 None:intergenic 25.0%
!!! TACTTTTTAGGAATCAATAG+AGG - Chr1:101319474-101319493 MsG0180006204.01.T01:intron 25.0%
!!! TATATATATCCTTTTGGAAC+AGG - Chr1:101322094-101322113 MsG0180006204.01.T01:intron 25.0%
!!! TCGAAAGAATTTTTTTACAG+TGG - Chr1:101316389-101316408 MsG0180006204.01.T01:CDS 25.0%
!!! TTAGGTTGAATTTATTGGTT+AGG - Chr1:101316941-101316960 MsG0180006204.01.T01:intron 25.0%
!!! TTATTGGTTAGGGTTTTATA+TGG - Chr1:101316952-101316971 MsG0180006204.01.T01:intron 25.0%
!!! TTTTTAGGTTTGTGTGATAT+TGG - Chr1:101319555-101319574 MsG0180006204.01.T01:intron 25.0%
!!! TTTTTTTACAGTGGGAATAT+CGG - Chr1:101316398-101316417 MsG0180006204.01.T01:CDS 25.0%
AAAACGTGATGAATTGACAT+TGG - Chr1:101321780-101321799 MsG0180006204.01.T01:CDS 30.0%
AAAATCTGTATCAGCTATAG+AGG + Chr1:101321458-101321477 None:intergenic 30.0%
AAATCCAAAATTGGATTTGG+AGG - Chr1:101319927-101319946 MsG0180006204.01.T01:intron 30.0%
AACAAATCATGTGTCTTGAA+GGG + Chr1:101319726-101319745 None:intergenic 30.0%
AAGAGAAAGAGATGCAATTA+TGG - Chr1:101322187-101322206 MsG0180006204.01.T01:intron 30.0%
AAGGATCTTCAAGATATAGA+TGG + Chr1:101317422-101317441 None:intergenic 30.0%
AATCCAAAATTGGATTTGGA+GGG - Chr1:101319928-101319947 MsG0180006204.01.T01:intron 30.0%
ACTAAAACCAATCATCAAAC+AGG + Chr1:101321375-101321394 None:intergenic 30.0%
ACTATAGAATAGATCTCTGA+TGG + Chr1:101319218-101319237 None:intergenic 30.0%
ACTTAGTTGGATGTATCTTT+AGG - Chr1:101321552-101321571 MsG0180006204.01.T01:intron 30.0%
AGAGGATCAAAATCCAAAAT+TGG - Chr1:101319918-101319937 MsG0180006204.01.T01:intron 30.0%
AGGTAAAGTTTCAGATGATT+GGG + Chr1:101321523-101321542 None:intergenic 30.0%
AGTTTCACATTTAACCTGTT+AGG + Chr1:101318105-101318124 None:intergenic 30.0%
ATAAAATGACAGAGAAGGTA+AGG + Chr1:101321215-101321234 None:intergenic 30.0%
ATAAATTGTGACCATTCCAT+TGG - Chr1:101320590-101320609 MsG0180006204.01.T01:intron 30.0%
ATAATGAGAAACTAAAGGCA+AGG - Chr1:101318171-101318190 MsG0180006204.01.T01:intron 30.0%
ATAGGAGATGTTGTCAAAAA+AGG + Chr1:101320185-101320204 None:intergenic 30.0%
ATTCAGAGACTACATAAGTT+TGG + Chr1:101321657-101321676 None:intergenic 30.0%
ATTCATTAACAAACCACATG+TGG + Chr1:101319766-101319785 None:intergenic 30.0%
CTAATTGAAACATAACAGAG+AGG + Chr1:101316899-101316918 None:intergenic 30.0%
CTACTTAGCAAAGTTGTAAT+TGG + Chr1:101321273-101321292 None:intergenic 30.0%
CTTAGTTGGATGTATCTTTA+GGG - Chr1:101321553-101321572 MsG0180006204.01.T01:intron 30.0%
GAATCTTCATATTTCAGGAT+TGG - Chr1:101316364-101316383 MsG0180006204.01.T01:CDS 30.0%
GTCTTGTATTACTTAAACGA+CGG - Chr1:101317138-101317157 MsG0180006204.01.T01:intron 30.0%
GTGAAACCATATACTAAAGT+GGG + Chr1:101317501-101317520 None:intergenic 30.0%
GTTGTGATCATATGATGATA+AGG + Chr1:101317298-101317317 None:intergenic 30.0%
GTTTGACTCAACTTTCTAAT+AGG - Chr1:101319883-101319902 MsG0180006204.01.T01:intron 30.0%
TAAATTGTGACCATTCCATT+GGG - Chr1:101320591-101320610 MsG0180006204.01.T01:intron 30.0%
TAACAAATCATGTGTCTTGA+AGG + Chr1:101319727-101319746 None:intergenic 30.0%
TATGGAAAGAAAACTGAAAG+AGG + Chr1:101317942-101317961 None:intergenic 30.0%
TCAACTTTCTAATAGGGAAA+GGG - Chr1:101319890-101319909 MsG0180006204.01.T01:intron 30.0%
TCATGATCAAATTAAGCTTC+AGG + Chr1:101319102-101319121 None:intergenic 30.0%
TCCAAATAAAATGACAGAGA+AGG + Chr1:101321220-101321239 None:intergenic 30.0%
TTCATTAACAAACCACATGT+GGG + Chr1:101319765-101319784 None:intergenic 30.0%
! AGCTGAAATTTGGTTTACAA+GGG + Chr1:101317579-101317598 None:intergenic 30.0%
! AGGTATACTGTCTATGATTT+TGG - Chr1:101320705-101320724 MsG0180006204.01.T01:intron 30.0%
! ATGTTTTGCACCTTGTAATT+TGG + Chr1:101316431-101316450 None:intergenic 30.0%
! ATTTTCATTTACCTTTCGCT+TGG + Chr1:101321995-101322014 None:intergenic 30.0%
! CTTTGAATAAGGCACTATAT+TGG - Chr1:101317194-101317213 MsG0180006204.01.T01:intron 30.0%
! GAAGCTTAATTTGATCATGA+CGG - Chr1:101319102-101319121 MsG0180006204.01.T01:intron 30.0%
! GAATCAATAGAGGGTAATTT+TGG - Chr1:101319484-101319503 MsG0180006204.01.T01:intron 30.0%
! TATAAAGGTTCTTTAGGAAC+AGG - Chr1:101322015-101322034 MsG0180006204.01.T01:CDS 30.0%
! TATTCATGGTTTTCGTTCAA+TGG + Chr1:101319071-101319090 None:intergenic 30.0%
! TCAATTCATCACGTTTTACA+AGG + Chr1:101321777-101321796 None:intergenic 30.0%
! TGGGTTGAATTAACAGATTA+GGG - Chr1:101319504-101319523 MsG0180006204.01.T01:intron 30.0%
! TTACTCTTGTTGTAAACTTG+TGG - Chr1:101321609-101321628 MsG0180006204.01.T01:intron 30.0%
! TTTCTTTCTTTTTCTCGTCA+AGG - Chr1:101321074-101321093 MsG0180006204.01.T01:intron 30.0%
!! ATTGATAACGACTGATGTTT+GGG - Chr1:101322238-101322257 MsG0180006204.01.T01:intron 30.0%
!! CAAGACACATGATTTGTTAT+AGG - Chr1:101319728-101319747 MsG0180006204.01.T01:intron 30.0%
!! GTCAATTAGTTTGCAATTGT+TGG + Chr1:101320747-101320766 None:intergenic 30.0%
!! TATAAAGTGTGTTGTTTGCT+TGG - Chr1:101319809-101319828 MsG0180006204.01.T01:intron 30.0%
!! TATTGATAACGACTGATGTT+TGG - Chr1:101322237-101322256 MsG0180006204.01.T01:intron 30.0%
!! TTGGGTTGAATTAACAGATT+AGG - Chr1:101319503-101319522 MsG0180006204.01.T01:intron 30.0%
!!! ACCTTCTCTGTCATTTTATT+TGG - Chr1:101321216-101321235 MsG0180006204.01.T01:intron 30.0%
!!! CTCTGTCATTTTATTTGGAA+TGG - Chr1:101321221-101321240 MsG0180006204.01.T01:intron 30.0%
!!! TTTTTTACCAACAACGAAAG+AGG - Chr1:101317251-101317270 MsG0180006204.01.T01:intron 30.0%
AAAAAAAAAGAGTTGCGGGA+AGG - Chr1:101318849-101318868 MsG0180006204.01.T01:intron 35.0%
AAAATTGGATTTGGAGGGAA+GGG - Chr1:101319933-101319952 MsG0180006204.01.T01:intron 35.0%
AACAATACCAAACACGTTTG+TGG + Chr1:101317096-101317115 None:intergenic 35.0%
AAGGTTTCTCAAAACCGTAT+TGG + Chr1:101316716-101316735 None:intergenic 35.0%
ACAGGTTAAATGTGAAACTG+TGG - Chr1:101318106-101318125 MsG0180006204.01.T01:intron 35.0%
ACTACAACAACAATGAAGAG+AGG + Chr1:101320094-101320113 None:intergenic 35.0%
ATGACGGTTGGATTTGAATA+AGG - Chr1:101319118-101319137 MsG0180006204.01.T01:intron 35.0%
ATGCTTACGTTGGAATATGT+GGG + Chr1:101317742-101317761 None:intergenic 35.0%
ATTATGGATGAATTTCGTGC+TGG - Chr1:101322203-101322222 MsG0180006204.01.T01:intron 35.0%
ATTGCATCTCTTTCTCTTTG+AGG + Chr1:101322185-101322204 None:intergenic 35.0%
CAAATGTGGAATAGAGACAA+AGG - Chr1:101318644-101318663 MsG0180006204.01.T01:intron 35.0%
CGTGAAACCATATACTAAAG+TGG + Chr1:101317502-101317521 None:intergenic 35.0%
CTACAACAACAATGAAGAGA+GGG + Chr1:101320093-101320112 None:intergenic 35.0%
CTCAACTTTCTAATAGGGAA+AGG - Chr1:101319889-101319908 MsG0180006204.01.T01:intron 35.0%
GAATATAACAGCTTGAGTGA+TGG + Chr1:101321965-101321984 None:intergenic 35.0%
GAATTCTGACAGCTGAAATT+TGG + Chr1:101317589-101317608 None:intergenic 35.0%
GACAGTAGAAGAAAGGTTTA+GGG + Chr1:101316581-101316600 None:intergenic 35.0%
GACGTGGATTTAAGAAATGA+GGG - Chr1:101319580-101319599 MsG0180006204.01.T01:intron 35.0%
GAGGTAAAGTTTCAGATGAT+TGG + Chr1:101321524-101321543 None:intergenic 35.0%
GGTGATAAATAGGGTTAAAG+AGG - Chr1:101321338-101321357 MsG0180006204.01.T01:intron 35.0%
GTCATCTCCAAAATTTCATG+AGG + Chr1:101321724-101321743 None:intergenic 35.0%
TAACAACATAATTTCCCCTC+AGG + Chr1:101321430-101321449 None:intergenic 35.0%
TACAACAACAATGAAGAGAG+GGG + Chr1:101320092-101320111 None:intergenic 35.0%
TATATTCACCAGATGAGTGA+GGG + Chr1:101320573-101320592 None:intergenic 35.0%
TCAGAGATCGTGTAAAACAA+AGG - Chr1:101319271-101319290 MsG0180006204.01.T01:intron 35.0%
TGACAGTAGAAGAAAGGTTT+AGG + Chr1:101316582-101316601 None:intergenic 35.0%
TGACGTGGATTTAAGAAATG+AGG - Chr1:101319579-101319598 MsG0180006204.01.T01:intron 35.0%
TGGATTCCCACTTTAGTATA+TGG - Chr1:101317492-101317511 MsG0180006204.01.T01:intron 35.0%
TTATATTCACCAGATGAGTG+AGG + Chr1:101320574-101320593 None:intergenic 35.0%
TTATGTTGATGTTGAAAGGG+AGG - Chr1:101321897-101321916 MsG0180006204.01.T01:CDS 35.0%
TTCACTATCTCATCAATGCA+CGG - Chr1:101322152-101322171 MsG0180006204.01.T01:intron 35.0%
TTGTAATTTGAACAGGTTGC+AGG - Chr1:101320794-101320813 MsG0180006204.01.T01:intron 35.0%
TTTAATTGTGTCTCCGACAA+GGG - Chr1:101320818-101320837 MsG0180006204.01.T01:intron 35.0%
TTTGCTAAGTAGACTTCACA+AGG - Chr1:101321281-101321300 MsG0180006204.01.T01:intron 35.0%
! AAACATTTTGTCACTAGGGA+AGG + Chr1:101317441-101317460 None:intergenic 35.0%
! AAATCCAAAGAATGTTGGCT+TGG - Chr1:101316465-101316484 MsG0180006204.01.T01:CDS 35.0%
! AACAGATTAGGGTTTTCCAA+TGG - Chr1:101319515-101319534 MsG0180006204.01.T01:intron 35.0%
! AGTTTTGCGGAGAAAATGAA+AGG - Chr1:101318452-101318471 MsG0180006204.01.T01:intron 35.0%
! CAGACTACAGTTTTCAATGA+AGG - Chr1:101318060-101318079 MsG0180006204.01.T01:intron 35.0%
! CAGCTGAAATTTGGTTTACA+AGG + Chr1:101317580-101317599 None:intergenic 35.0%
! CGGAAACTTGAGTAAGTTTT+AGG - Chr1:101316923-101316942 MsG0180006204.01.T01:intron 35.0%
! CTCTTCATTGTTGTTGTAGT+TGG - Chr1:101320094-101320113 MsG0180006204.01.T01:intron 35.0%
! CTTAATTTGATCATGACGGT+TGG - Chr1:101319106-101319125 MsG0180006204.01.T01:intron 35.0%
! GTTTAGGGTTTCTATCAAGT+TGG + Chr1:101316566-101316585 None:intergenic 35.0%
! GTTTTGCGGAGAAAATGAAA+GGG - Chr1:101318453-101318472 MsG0180006204.01.T01:intron 35.0%
! TACGCTACCTCATGAAATTT+TGG - Chr1:101321714-101321733 MsG0180006204.01.T01:intron 35.0%
! TAGGCATTAGTCTGAAGATT+GGG + Chr1:101318724-101318743 None:intergenic 35.0%
! TTCTCCTTTTGATCATGTCA+AGG + Chr1:101320995-101321014 None:intergenic 35.0%
! TTTTGATCATGTCAAGGACT+CGG + Chr1:101320989-101321008 None:intergenic 35.0%
!! AATCCAAAGAATGTTGGCTT+GGG - Chr1:101316466-101316485 MsG0180006204.01.T01:CDS 35.0%
!! TTGTTTTACACGATCTCTGA+TGG + Chr1:101319271-101319290 None:intergenic 35.0%
!!! ATATATCCTTTTGGAACAGG+TGG - Chr1:101322097-101322116 MsG0180006204.01.T01:intron 35.0%
!!! CATTTTTTTGGCATCCTAAC+AGG - Chr1:101318088-101318107 MsG0180006204.01.T01:intron 35.0%
AAGAGGAACTCACTCTTTGA+CGG + Chr1:101316862-101316881 None:intergenic 40.0%
AAGATTGGGAAGACAACTTC+TGG + Chr1:101318710-101318729 None:intergenic 40.0%
AATTTCCATCACGCACAACA+TGG - Chr1:101317472-101317491 MsG0180006204.01.T01:intron 40.0%
ACCAACAACGAAAGAGGTTA+AGG - Chr1:101317257-101317276 MsG0180006204.01.T01:intron 40.0%
ACCCTGAATGATAGGTAGAA+CGG + Chr1:101316757-101316776 None:intergenic 40.0%
ACGTGATGAATTGACATTGG+AGG - Chr1:101321783-101321802 MsG0180006204.01.T01:CDS 40.0%
ACTTTCTAATAGGGAAAGGG+AGG - Chr1:101319893-101319912 MsG0180006204.01.T01:intron 40.0%
AGGAGAGAGAAGATGAAAAG+AGG + Chr1:101316879-101316898 None:intergenic 40.0%
AGTATACCTGTCATGGTCAT+AGG + Chr1:101320694-101320713 None:intergenic 40.0%
AGTTCAACATGCCCAAATCA+AGG + Chr1:101320391-101320410 None:intergenic 40.0%
AGTTTATGACAGATCCTGTG+AGG - Chr1:101321749-101321768 MsG0180006204.01.T01:CDS 40.0%
AGTTTGGAAAGAATGCAGAC+AGG + Chr1:101321641-101321660 None:intergenic 40.0%
ATCAAAGACGATTTACTGCG+TGG - Chr1:101316684-101316703 MsG0180006204.01.T01:CDS 40.0%
ATTCAGAGCTTCGATGAGAT+GGG - Chr1:101316660-101316679 MsG0180006204.01.T01:CDS 40.0%
ATTCTGTAACACCAAGCGAA+AGG - Chr1:101321981-101322000 MsG0180006204.01.T01:CDS 40.0%
CAAAATTGGATTTGGAGGGA+AGG - Chr1:101319932-101319951 MsG0180006204.01.T01:intron 40.0%
CAAATGACTGATGCTTACGT+TGG + Chr1:101317752-101317771 None:intergenic 40.0%
CAACGTAAGCATCAGTCATT+TGG - Chr1:101317750-101317769 MsG0180006204.01.T01:CDS 40.0%
CATAGACAGTATACCTGTCA+TGG + Chr1:101320701-101320720 None:intergenic 40.0%
CGACGGAATCTTCATATTTC+AGG - Chr1:101316359-101316378 MsG0180006204.01.T01:CDS 40.0%
CGGAACTTGTCCAAATTACA+AGG - Chr1:101316418-101316437 MsG0180006204.01.T01:CDS 40.0%
CTCATTTCCACTCCTTCATA+TGG + Chr1:101321407-101321426 None:intergenic 40.0%
CTGCGTGGAATTTACCAATA+CGG - Chr1:101316699-101316718 MsG0180006204.01.T01:CDS 40.0%
CTTTAATTGTGTCTCCGACA+AGG - Chr1:101320817-101320836 MsG0180006204.01.T01:intron 40.0%
CTTTCTAATAGGGAAAGGGA+GGG - Chr1:101319894-101319913 MsG0180006204.01.T01:intron 40.0%
GACACAAGGAAACTTGAACA+CGG - Chr1:101320936-101320955 MsG0180006204.01.T01:intron 40.0%
GAGACGCACGAGTTAAATAT+TGG + Chr1:101320019-101320038 None:intergenic 40.0%
GAGTCCTTGACATGATCAAA+AGG - Chr1:101320988-101321007 MsG0180006204.01.T01:intron 40.0%
GATGCTTACGTTGGAATATG+TGG + Chr1:101317743-101317762 None:intergenic 40.0%
GATTTGGGCATGTTGAACTA+TGG - Chr1:101320392-101320411 MsG0180006204.01.T01:intron 40.0%
GTGCATATAATACCCACATG+TGG - Chr1:101319750-101319769 MsG0180006204.01.T01:intron 40.0%
TATTTGAGAATGCCCTGTGA+TGG - Chr1:101320509-101320528 MsG0180006204.01.T01:intron 40.0%
TCCTTAACCTCTTTCGTTGT+TGG + Chr1:101317261-101317280 None:intergenic 40.0%
TGTGTATAGATATCTCCCTC+CGG - Chr1:101321176-101321195 MsG0180006204.01.T01:intron 40.0%
TTGATGTTGAAAGGGAGGAA+TGG - Chr1:101321902-101321921 MsG0180006204.01.T01:CDS 40.0%
TTGTGTGATATTGGATGACG+TGG - Chr1:101319564-101319583 MsG0180006204.01.T01:intron 40.0%
TTTCTTCTACTGTCACTCAG+CGG - Chr1:101316587-101316606 MsG0180006204.01.T01:intron 40.0%
TTTGTGCAAAGTCATGAAGC+AGG - Chr1:101318390-101318409 MsG0180006204.01.T01:intron 40.0%
! ATGTTGTGCGTGATGGAAAT+TGG + Chr1:101317473-101317492 None:intergenic 40.0%
! CAATGGTTGGAGTTGTTTCA+GGG - Chr1:101319532-101319551 MsG0180006204.01.T01:intron 40.0%
! CTTCCCTCCAAATCCAATTT+TGG + Chr1:101319934-101319953 None:intergenic 40.0%
! GATTAGGGTTTTCCAATGGT+TGG - Chr1:101319519-101319538 MsG0180006204.01.T01:intron 40.0%
! GCTTTATGTTTCTGTGACAC+TGG - Chr1:101317002-101317021 MsG0180006204.01.T01:intron 40.0%
! GTAGGCATTAGTCTGAAGAT+TGG + Chr1:101318725-101318744 None:intergenic 40.0%
! TAGTTGGCACTTTGACTTCT+CGG - Chr1:101320110-101320129 MsG0180006204.01.T01:intron 40.0%
! TGATGTGCCTGTTTGATGAT+TGG - Chr1:101321365-101321384 MsG0180006204.01.T01:intron 40.0%
! TGTTGTTTGCTTGGTCTGTT+TGG - Chr1:101319818-101319837 MsG0180006204.01.T01:intron 40.0%
!! ATCCAAAGAATGTTGGCTTG+GGG - Chr1:101316467-101316486 MsG0180006204.01.T01:CDS 40.0%
!! GGAGTTGTTTCAGGGTTTTT+AGG - Chr1:101319540-101319559 MsG0180006204.01.T01:intron 40.0%
!! GTGTCATTGACACTTTTGTG+TGG + Chr1:101318585-101318604 None:intergenic 40.0%
!!! GGTCTCTGTCATTTTGTTGA+AGG - Chr1:101319292-101319311 MsG0180006204.01.T01:intron 40.0%
AACAGTGAGAGCAATCATGG+AGG + Chr1:101316820-101316839 None:intergenic 45.0%
ACACGGAGTTCATGTAGTGT+CGG - Chr1:101320953-101320972 MsG0180006204.01.T01:intron 45.0%
ACTCCACAAATGCGTGTTTG+CGG + Chr1:101319430-101319449 None:intergenic 45.0%
AGTGACCTGACACCATATGA+AGG - Chr1:101321392-101321411 MsG0180006204.01.T01:intron 45.0%
AGTGTGTCAAATGGGATCAG+GGG - Chr1:101316331-101316350 MsG0180006204.01.T01:CDS 45.0%
ATACGAGCACATGCATGCAT+TGG - Chr1:101320894-101320913 MsG0180006204.01.T01:intron 45.0%
ATCAGCTGGAGTGTGTCAAA+TGG - Chr1:101316322-101316341 MsG0180006204.01.T01:CDS 45.0%
ATGGTGGCTCACCTTGATTT+GGG - Chr1:101320377-101320396 MsG0180006204.01.T01:intron 45.0%
ATGTTGCCAAAGCGGTCTTA+TGG - Chr1:101320358-101320377 MsG0180006204.01.T01:intron 45.0%
ATTACCCGCCTCATGATTAC+AGG - Chr1:101321861-101321880 MsG0180006204.01.T01:CDS 45.0%
CAAAGCTTCGAGACATCGAA+GGG - Chr1:101316627-101316646 MsG0180006204.01.T01:CDS 45.0%
CAGCAGAGGAGAGAAGAAAA+AGG - Chr1:101318942-101318961 MsG0180006204.01.T01:intron 45.0%
CCACTTACTCGGAAAGATGA+CGG + Chr1:101318322-101318341 None:intergenic 45.0%
CCTGAAACAACTCCAACCAT+TGG + Chr1:101319534-101319553 None:intergenic 45.0%
GAGTGTGTCAAATGGGATCA+GGG - Chr1:101316330-101316349 MsG0180006204.01.T01:CDS 45.0%
GATAGGTTCTTCTGACCCAA+TGG + Chr1:101320609-101320628 None:intergenic 45.0%
GATTCAGAGCTTCGATGAGA+TGG - Chr1:101316659-101316678 MsG0180006204.01.T01:CDS 45.0%
GCAAACAGTGAGAGCAATCA+TGG + Chr1:101316823-101316842 None:intergenic 45.0%
GCCGTTCTACCTATCATTCA+GGG - Chr1:101316753-101316772 MsG0180006204.01.T01:intron 45.0%
GCTGAGTGACAGTAGAAGAA+AGG + Chr1:101316588-101316607 None:intergenic 45.0%
GTAAGGTGAACCTGAAGATC+CGG + Chr1:101321198-101321217 None:intergenic 45.0%
GTTCTTCTGACCCAATGGAA+TGG + Chr1:101320604-101320623 None:intergenic 45.0%
GTTTGCGGTGATACAAGACT+CGG + Chr1:101319415-101319434 None:intergenic 45.0%
GTTTGCTTGGTCTGTTTGGT+TGG - Chr1:101319822-101319841 MsG0180006204.01.T01:intron 45.0%
TACCAAACACGTTTGTGGAG+TGG + Chr1:101317091-101317110 None:intergenic 45.0%
TATGGTGGCTCACCTTGATT+TGG - Chr1:101320376-101320395 MsG0180006204.01.T01:intron 45.0%
TCAAAGCTTCGAGACATCGA+AGG - Chr1:101316626-101316645 MsG0180006204.01.T01:CDS 45.0%
TCAGCTGGAGTGTGTCAAAT+GGG - Chr1:101316323-101316342 MsG0180006204.01.T01:CDS 45.0%
TCGGCATTGTGACAGATCAA+TGG + Chr1:101319396-101319415 None:intergenic 45.0%
TCTGATGAAATGCTGAGCAG+AGG - Chr1:101321132-101321151 MsG0180006204.01.T01:intron 45.0%
TGATTTCTGCAAAACCACCG+TGG + Chr1:101320323-101320342 None:intergenic 45.0%
TGCCGTTCTACCTATCATTC+AGG - Chr1:101316752-101316771 MsG0180006204.01.T01:intron 45.0%
TGGAATGTTCGCTCGCAATT+TGG + Chr1:101316546-101316565 None:intergenic 45.0%
TGGGAAGACAACTTCTGGTA+TGG + Chr1:101318705-101318724 None:intergenic 45.0%
TGTACAGCAGGCAAGTTGTT+AGG - Chr1:101322274-101322293 MsG0180006204.01.T01:CDS 45.0%
TTACCCGCCTCATGATTACA+GGG - Chr1:101321862-101321881 MsG0180006204.01.T01:CDS 45.0%
TTACGTTGGAATATGTGGGC+AGG + Chr1:101317738-101317757 None:intergenic 45.0%
! ACGACGGCTATGTTTGTTGA+CGG - Chr1:101317154-101317173 MsG0180006204.01.T01:intron 45.0%
! AGCTATCAAGTTGCTTGTGC+TGG - Chr1:101321028-101321047 MsG0180006204.01.T01:intron 45.0%
! CCAATGGTTGGAGTTGTTTC+AGG - Chr1:101319531-101319550 MsG0180006204.01.T01:intron 45.0%
! CGTTTTACAAGGATCCTCAC+AGG + Chr1:101321766-101321785 None:intergenic 45.0%
!! AAAGCGTTGGAGAAGACACA+AGG - Chr1:101320922-101320941 MsG0180006204.01.T01:intron 45.0%
!! CGGTGGTTTTGCAGAAATCA+TGG - Chr1:101320323-101320342 MsG0180006204.01.T01:intron 45.0%
!!! ATTATTATATATTTTTACTA+TGG + Chr1:101318486-101318505 None:intergenic 5.0%
AAGGAGTGGAAATGAGCCTG+AGG - Chr1:101321411-101321430 MsG0180006204.01.T01:intron 50.0%
AATAGGGAAAGGGAGGGAAG+AGG - Chr1:101319900-101319919 MsG0180006204.01.T01:intron 50.0%
AATGCCCTGTGATGGTCAGT+TGG - Chr1:101320517-101320536 MsG0180006204.01.T01:intron 50.0%
ACCAGTCCACCTGTTCCAAA+AGG + Chr1:101322106-101322125 None:intergenic 50.0%
ACGCACATCACTCCAGTAAC+TGG + Chr1:101321588-101321607 None:intergenic 50.0%
ACGGAGTTCATGTAGTGTCG+GGG - Chr1:101320955-101320974 MsG0180006204.01.T01:intron 50.0%
ACGTCACGACCCTGAATGAT+AGG + Chr1:101316765-101316784 None:intergenic 50.0%
AGACCGCTTTGGCAACATCA+TGG + Chr1:101320356-101320375 None:intergenic 50.0%
AGCAATCATGGAGGACTTGC+CGG + Chr1:101316811-101316830 None:intergenic 50.0%
AGCAGAGACAACTTCAGCAG+AGG - Chr1:101318928-101318947 MsG0180006204.01.T01:intron 50.0%
AGGAACTCACTCTTTGACGG+AGG + Chr1:101316859-101316878 None:intergenic 50.0%
AGGAGTGGAAATGAGCCTGA+GGG - Chr1:101321412-101321431 MsG0180006204.01.T01:intron 50.0%
ATATCTCCCTCCGGATCTTC+AGG - Chr1:101321185-101321204 MsG0180006204.01.T01:intron 50.0%
ATGCCCTGTAATCATGAGGC+GGG + Chr1:101321868-101321887 None:intergenic 50.0%
ATGCCCTGTGATGGTCAGTT+GGG - Chr1:101320518-101320537 MsG0180006204.01.T01:intron 50.0%
ATGGAGCCTATGACCATGAC+AGG - Chr1:101320685-101320704 MsG0180006204.01.T01:intron 50.0%
CACGGAGTTCATGTAGTGTC+GGG - Chr1:101320954-101320973 MsG0180006204.01.T01:intron 50.0%
CCACCATGATGTTGCCAAAG+CGG - Chr1:101320350-101320369 MsG0180006204.01.T01:intron 50.0%
CCACTCCTTCATATGGTGTC+AGG + Chr1:101321400-101321419 None:intergenic 50.0%
CCGTCATCTTTCCGAGTAAG+TGG - Chr1:101318319-101318338 MsG0180006204.01.T01:intron 50.0%
CCTGACACCATATGAAGGAG+TGG - Chr1:101321397-101321416 MsG0180006204.01.T01:intron 50.0%
CCTGATGCCCTGTAATCATG+AGG + Chr1:101321872-101321891 None:intergenic 50.0%
CGCACATCACTCCAGTAACT+GGG + Chr1:101321587-101321606 None:intergenic 50.0%
CTCCAATCACTCACTCTTGG+AGG + Chr1:101319642-101319661 None:intergenic 50.0%
CTCCACTCCACAAACGTGTT+TGG - Chr1:101317086-101317105 MsG0180006204.01.T01:intron 50.0%
CTCCTCCAAGAGTGAGTGAT+TGG - Chr1:101319637-101319656 MsG0180006204.01.T01:intron 50.0%
GATGCCCTGTAATCATGAGG+CGG + Chr1:101321869-101321888 None:intergenic 50.0%
GATTGCTCTCACTGTTTGCC+AGG - Chr1:101316824-101316843 MsG0180006204.01.T01:CDS 50.0%
GCACGCTGTTGAATGGATGA+AGG + Chr1:101316735-101316754 None:intergenic 50.0%
GCTCTCCAATCACTCACTCT+TGG + Chr1:101319645-101319664 None:intergenic 50.0%
GGAATCCATGTTGTGCGTGA+TGG + Chr1:101317480-101317499 None:intergenic 50.0%
GGAGTGTGTCAAATGGGATC+AGG - Chr1:101316329-101316348 MsG0180006204.01.T01:CDS 50.0%
GTCATCGCTCAGTCTCAATC+TGG - Chr1:101316783-101316802 MsG0180006204.01.T01:intron 50.0%
GTGTGTCAAATGGGATCAGG+GGG - Chr1:101316332-101316351 MsG0180006204.01.T01:CDS 50.0%
GTTGGAATATGTGGGCAGGA+AGG + Chr1:101317734-101317753 None:intergenic 50.0%
TAGAACGGCACGCTGTTGAA+TGG + Chr1:101316742-101316761 None:intergenic 50.0%
TCACCGCAAACACGCATTTG+TGG - Chr1:101319424-101319443 MsG0180006204.01.T01:intron 50.0%
TCGTGGACTTGATGTACAGC+AGG - Chr1:101322262-101322281 MsG0180006204.01.T01:CDS 50.0%
TCTGTTTGGTTGGAGGTAGG+TGG - Chr1:101319832-101319851 MsG0180006204.01.T01:intron 50.0%
TGCTTGGTCTGTTTGGTTGG+AGG - Chr1:101319825-101319844 MsG0180006204.01.T01:intron 50.0%
TGGTCTGTTTGGTTGGAGGT+AGG - Chr1:101319829-101319848 MsG0180006204.01.T01:intron 50.0%
TGTCTCTGCTGAACTGACAG+AGG + Chr1:101318918-101318937 None:intergenic 50.0%
TGTGAGGCCAATTCCCTTGT+CGG + Chr1:101320834-101320853 None:intergenic 50.0%
TGTGTCTCCGACAAGGGAAT+TGG - Chr1:101320824-101320843 MsG0180006204.01.T01:intron 50.0%
! CCTCATGATTACAGGGCATC+AGG - Chr1:101321869-101321888 MsG0180006204.01.T01:CDS 50.0%
! CGACGGCTATGTTTGTTGAC+GGG - Chr1:101317155-101317174 MsG0180006204.01.T01:intron 50.0%
! GCTCAGTCTCAATCTGGAAC+CGG - Chr1:101316789-101316808 MsG0180006204.01.T01:intron 50.0%
! GGTCAGTTGGGCTGTTCTTT+TGG - Chr1:101320530-101320549 MsG0180006204.01.T01:intron 50.0%
! TGCATTGGAGGCAAAAGCGT+TGG - Chr1:101320909-101320928 MsG0180006204.01.T01:intron 50.0%
! TTGCCAAAGCGGTCTTATGG+TGG - Chr1:101320361-101320380 MsG0180006204.01.T01:intron 50.0%
!! GGATGTATCTTTAGGGTCCG+TGG - Chr1:101321560-101321579 MsG0180006204.01.T01:intron 50.0%
!! TGACGGAGGTATCAACAACC+TGG + Chr1:101316845-101316864 None:intergenic 50.0%
!!! CTTTTGGTTAGCCTGCTCAG+AGG - Chr1:101320546-101320565 MsG0180006204.01.T01:intron 50.0%
!!! TCCTTTTGGAACAGGTGGAC+TGG - Chr1:101322102-101322121 MsG0180006204.01.T01:intron 50.0%
AAGACCCCACTTGCCACCTT+GGG + Chr1:101316493-101316512 None:intergenic 55.0%
ACAGCCCAACTGACCATCAC+AGG + Chr1:101320525-101320544 None:intergenic 55.0%
ACGACTGATGTTTGGGCTCG+TGG - Chr1:101322245-101322264 MsG0180006204.01.T01:intron 55.0%
AGGTGAACCTGAAGATCCGG+AGG + Chr1:101321195-101321214 None:intergenic 55.0%
ATCATGTCAAGGACTCGGCC+AGG + Chr1:101320984-101321003 None:intergenic 55.0%
CACTCCAGTAACTGGGACCA+CGG + Chr1:101321580-101321599 None:intergenic 55.0%
CAGCCCAACTGACCATCACA+GGG + Chr1:101320524-101320543 None:intergenic 55.0%
CCGCTTTGGCAACATCATGG+TGG + Chr1:101320353-101320372 None:intergenic 55.0%
CGAGCACATGCATGCATTGG+AGG - Chr1:101320897-101320916 MsG0180006204.01.T01:intron 55.0%
CTACTGTCACTCAGCGGCTA+TGG - Chr1:101316593-101316612 MsG0180006204.01.T01:intron 55.0%
GAGCCACCATAAGACCGCTT+TGG + Chr1:101320367-101320386 None:intergenic 55.0%
GGAGTGGAAATGAGCCTGAG+GGG - Chr1:101321413-101321432 MsG0180006204.01.T01:intron 55.0%
GGCCCCAAGCCAACATTCTT+TGG + Chr1:101316472-101316491 None:intergenic 55.0%
GGTGAACCTGAAGATCCGGA+GGG + Chr1:101321194-101321213 None:intergenic 55.0%
TCACTCAGCGGCTATGGCTA+TGG - Chr1:101316599-101316618 MsG0180006204.01.T01:intron 55.0%
TCAGAGGTCCCTCACTCATC+TGG - Chr1:101320562-101320581 MsG0180006204.01.T01:intron 55.0%
TGGTTGGAGGTAGGTGGAGA+GGG - Chr1:101319838-101319857 MsG0180006204.01.T01:intron 55.0%
TTGGTTGGAGGTAGGTGGAG+AGG - Chr1:101319837-101319856 MsG0180006204.01.T01:intron 55.0%
! ACACACTCCAGCTGATGACG+TGG + Chr1:101316318-101316337 None:intergenic 55.0%
! TGGGATCAGGGGGTTTTCGA+CGG - Chr1:101316342-101316361 MsG0180006204.01.T01:CDS 55.0%
GAAGACCCCACTTGCCACCT+TGG + Chr1:101316494-101316513 None:intergenic 60.0%
TGAGTGAGGGACCTCTGAGC+AGG + Chr1:101320560-101320579 None:intergenic 60.0%
TGGAGGTAGGTGGAGAGGGA+GGG - Chr1:101319842-101319861 MsG0180006204.01.T01:intron 60.0%
TTGGAGGTAGGTGGAGAGGG+AGG - Chr1:101319841-101319860 MsG0180006204.01.T01:intron 60.0%
! CATGTAGTGTCGGGGACTCC+TGG - Chr1:101320963-101320982 MsG0180006204.01.T01:intron 60.0%
!! GAATGTTGGCTTGGGGCCCA+AGG - Chr1:101316474-101316493 MsG0180006204.01.T01:intron 60.0%
GGGTCCGTGGTCCCAGTTAC+TGG - Chr1:101321573-101321592 MsG0180006204.01.T01:intron 65.0%
TGGGGCCCAAGGTGGCAAGT+GGG - Chr1:101316485-101316504 MsG0180006204.01.T01:intron 65.0%
TTGGGGCCCAAGGTGGCAAG+TGG - Chr1:101316484-101316503 MsG0180006204.01.T01:intron 65.0%
!! TGTTGGCTTGGGGCCCAAGG+TGG - Chr1:101316477-101316496 MsG0180006204.01.T01:intron 65.0%
GGGGCCCAAGGTGGCAAGTG+GGG - Chr1:101316486-101316505 MsG0180006204.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 101316312 101322295 101316312 ID=MsG0180006204.01;Name=MsG0180006204.01
Chr1 mRNA 101316312 101322295 101316312 ID=MsG0180006204.01.T01;Parent=MsG0180006204.01;Name=MsG0180006204.01.T01;_AED=0.50;_eAED=0.52;_QI=0|0.5|0.42|1|0.83|0.85|7|0|393
Chr1 exon 101322254 101322295 101322254 ID=MsG0180006204.01.T01:exon:28005;Parent=MsG0180006204.01.T01
Chr1 exon 101321739 101322052 101321739 ID=MsG0180006204.01.T01:exon:28004;Parent=MsG0180006204.01.T01
Chr1 exon 101317558 101317798 101317558 ID=MsG0180006204.01.T01:exon:28003;Parent=MsG0180006204.01.T01
Chr1 exon 101317305 101317481 101317305 ID=MsG0180006204.01.T01:exon:28002;Parent=MsG0180006204.01.T01
Chr1 exon 101316803 101316910 101316803 ID=MsG0180006204.01.T01:exon:28001;Parent=MsG0180006204.01.T01
Chr1 exon 101316605 101316724 101316605 ID=MsG0180006204.01.T01:exon:28000;Parent=MsG0180006204.01.T01
Chr1 exon 101316312 101316491 101316312 ID=MsG0180006204.01.T01:exon:27999;Parent=MsG0180006204.01.T01
Chr1 CDS 101322254 101322295 101322254 ID=MsG0180006204.01.T01:cds;Parent=MsG0180006204.01.T01
Chr1 CDS 101321739 101322052 101321739 ID=MsG0180006204.01.T01:cds;Parent=MsG0180006204.01.T01
Chr1 CDS 101317558 101317798 101317558 ID=MsG0180006204.01.T01:cds;Parent=MsG0180006204.01.T01
Chr1 CDS 101317305 101317481 101317305 ID=MsG0180006204.01.T01:cds;Parent=MsG0180006204.01.T01
Chr1 CDS 101316803 101316910 101316803 ID=MsG0180006204.01.T01:cds;Parent=MsG0180006204.01.T01
Chr1 CDS 101316605 101316724 101316605 ID=MsG0180006204.01.T01:cds;Parent=MsG0180006204.01.T01
Chr1 CDS 101316312 101316491 101316312 ID=MsG0180006204.01.T01:cds;Parent=MsG0180006204.01.T01
Gene Sequence

>MsG0180006204.01.T01

ATGCCACGTCATCAGCTGGAGTGTGTCAAATGGGATCAGGGGCGAACATTCCAACTTGATAGAAACCCTAAACCTTTCTTCTACTGTCACTCAGCGGCTATGGCTATGGCGATTCAAAGCTTCGAGACATCGAAGGGTGTGAATGCGATTCAGAGCTTCGATGAGATGGGAATCAAAGACGATTTACTGCGTGGAATTTACCAATACGGTTTTGAGAAACCTTCATCCATTCAACAGCGTGCCGTTCTACCTATCATTCAGGGTCGTGACGTCATCGCTCAGTCTCAATCTGGAACCGGCAAGTCCTCCATGATTGCTCTCACTGTTTGCCAGGTTGTTGATACCTCCGTCAAAGAGTTGCAGGCTTTAATTGTGTCTCCGACAAGGGAATTGGCCTCACAAACTGAAAATGTTATTTTGGCAATTGGGAGTTTCATTAATATACGAGCACATGCATGCATTGGAGGCAAAAGCGTTGGAGAAGACACAAGGAAACTTGAACACGGAGTTCATGTAGTGTCGGGGACTCCTGGCCGAGTCCTTGACATGATCAAAAGGAGAACATTGTGCACAAGAGCTATCAAGTTGCTTGTGCTGGATGAATCTGATGAAATGCTGAGCAGAGGATTTAAAGATCAAATTTATGATGTGTATAGATATCTCCCTCCGGATCTTCAGGTTCACCTTACCTTCTCTGTCATTTTATTTGGAATGGAATTTCTGCAATTTGAATTTTTTTCTCCAATTACAACTTTGCTAAGTAGACTTCACAAGGTTTGCTTGATTTCTGCTACGCTACCTCATGAAATTTTGGAGATGACAAATAAGTTTATGACAGATCCTGTGAGGATCCTTGTAAAACGTGATGAATTGACATTGGAGGGCATCAGGCAATTTTATGTTGATGTTGAAAGGGAGGAATGGAAATTTGATACTCTTTGTGATCTTTATGATTATTTGACCATCACTCAAGCTGTTATATTCTGTAACACCAAGCGAAAGGTGGACTGGTTAACTGAAAAAATGCGTAACAATAATTTCACTATCTCATCAATGCACGGTGATATGCCTCAAAGAGAAAGAGATGCAATTATGGATGAATTTCGTGCTGGAACAACTCGAGTATTGATAACGACTGATGTTTGGGCTCGTGGACTTGATGTACAGCAGGCAAGTTGTTAG
Protein sequence

>MsG0180006204.01.T01

MPRHQLECVKWDQGRTFQLDRNPKPFFYCHSAAMAMAIQSFETSKGVNAIQSFDEMGIKDDLLRGIYQYGFEKPSSIQQRAVLPIIQGRDVIAQSQSGTGKSSMIALTVCQVVDTSVKELQALIVSPTRELASQTENVILAIGSFINIRAHACIGGKSVGEDTRKLEHGVHVVSGTPGRVLDMIKRRTLCTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVHLTFSVILFGMEFLQFEFFSPITTLLSRLHKVCLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIRQFYVDVEREEWKFDTLCDLYDYLTITQAVIFCNTKRKVDWLTEKMRNNNFTISSMHGDMPQRERDAIMDEFRAGTTRVLITTDVWARGLDVQQASC*