AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020886.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020886.01.T01 MTR_4g062090 86.740 822 19 6 1 749 1 805 0.0 1390
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020886.01.T01 AT3G46220 56.700 806 269 5 1 748 1 784 0.0 865
MsG0480020886.01.T01 AT3G46220 56.044 819 270 5 1 748 1 800 0.0 859
MsG0480020886.01.T01 AT3G46220 55.060 830 269 6 1 748 1 808 0.0 851
MsG0480020886.01.T01 AT3G46220 55.654 787 253 5 1 713 1 765 0.0 820

Find 148 sgRNAs with CRISPR-Local

Find 444 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGAGCTTGGAGAGCTTTA+TGG 0.122705 4:+50089329 None:intergenic
TTCTTCCAGTCTTTGTTTAA+TGG 0.150208 4:-50093933 MsG0480020886.01.T01:CDS
GGATTTGATTGCGTCTATTT+TGG 0.155034 4:-50094256 MsG0480020886.01.T01:CDS
GAGCTTCTTCATACTGCTTC+TGG 0.232031 4:-50095208 MsG0480020886.01.T01:CDS
TGTTGCTATTTCTCACTTGC+AGG 0.243124 4:-50089293 MsG0480020886.01.T01:intron
ATCATCTTCAAACAATTCTA+AGG 0.250541 4:+50091426 None:intergenic
TCCCGGAGCTCTTGCAAATA+AGG 0.250691 4:-50090726 MsG0480020886.01.T01:CDS
AAATTATTACGGAGTCTTAC+TGG 0.262997 4:-50094368 MsG0480020886.01.T01:CDS
TAAAGGGCCAAAGAAGAAAA+AGG 0.281971 4:-50092085 MsG0480020886.01.T01:CDS
TCTGAGTACAAGAGAGCTTC+TGG 0.282486 4:-50087940 MsG0480020886.01.T01:CDS
GAAGTATGTTCTTGGTTATC+AGG 0.292210 4:+50092018 None:intergenic
TTAGCTGTTTCAAGGTCTTT+AGG 0.316152 4:-50092225 MsG0480020886.01.T01:CDS
TCAAACAAGCATGCTGATAA+AGG 0.317743 4:-50092102 MsG0480020886.01.T01:CDS
ATCGATCTTGCTGATGTTAC+TGG 0.324699 4:-50094468 MsG0480020886.01.T01:CDS
GTAACAAGAGGTTTGCCTTC+AGG 0.329190 4:+50093310 None:intergenic
AGACCTTGTTCTTCAAAATC+AGG 0.330357 4:+50091838 None:intergenic
GTTGCTGAGGTGAAGAAGTT+AGG 0.347127 4:-50094504 MsG0480020886.01.T01:CDS
ATCTGTACAATTGGCACTTA+AGG 0.357383 4:-50093002 MsG0480020886.01.T01:intron
TGTTTGTTGTGGGACGAAAT+TGG 0.365397 4:+50095527 None:intergenic
CGAAACGATTCTTAGGCCTT+TGG 0.365599 4:-50091724 MsG0480020886.01.T01:CDS
GCAGAATTTACTACAAGAAA+TGG 0.369393 4:-50093988 MsG0480020886.01.T01:CDS
GCTAGTGGTGTGGCTGTTGA+TGG 0.370444 4:-50093960 MsG0480020886.01.T01:CDS
CAGATTCAAAGCCAGGTTCT+AGG 0.373865 4:-50091942 MsG0480020886.01.T01:CDS
TAGAGTAAAGACACAACTTT+TGG 0.377868 4:+50089449 None:intergenic
GCAACAGAAATGGCCCTTCC+AGG 0.383656 4:+50089310 None:intergenic
CAAAGGCCTAAGAATCGTTT+CGG 0.385086 4:+50091725 None:intergenic
CGACAAACTTGACAGTGTTA+TGG 0.390294 4:-50094019 MsG0480020886.01.T01:CDS
AATACAACAGAGCATCATTC+AGG 0.392797 4:+50087840 None:intergenic
TAGAGACATTAGCTGTTTCA+AGG 0.395214 4:-50092233 MsG0480020886.01.T01:CDS
TGTAAAAGATGAGGGCAATA+AGG 0.397783 4:+50093060 None:intergenic
GTTGAGTGAGTCCAGTGATA+TGG 0.400982 4:-50092139 MsG0480020886.01.T01:CDS
GGCCTTTGGCTAACAAAGTA+AGG 0.401542 4:-50091710 MsG0480020886.01.T01:CDS
AAAGTAAGGCCTACAATAAT+CGG 0.406180 4:-50091696 MsG0480020886.01.T01:CDS
CTTGTACTATGTTGAGAAGT+TGG 0.407899 4:-50094439 MsG0480020886.01.T01:CDS
AACGAAATAGACTCGGACTT+TGG 0.407948 4:+50091115 None:intergenic
ATGATCCCGAAACGATTCTT+AGG 0.413786 4:-50091731 MsG0480020886.01.T01:CDS
GAATCAAGGGGAAATTATTA+CGG 0.415672 4:-50094379 MsG0480020886.01.T01:CDS
TCGATCGGATAATCGAATAC+TGG 0.419545 4:+50095282 None:intergenic
AACTGCTACTGTGACTCTAT+TGG 0.422613 4:-50088471 MsG0480020886.01.T01:CDS
AGGTGCTGCAAGGGGTATTA+CGG 0.428595 4:-50094045 MsG0480020886.01.T01:CDS
CATAACACTGTCAAGTTTGT+CGG 0.432174 4:+50094020 None:intergenic
ATGTAGTCAGATTGCTTTGA+CGG 0.434988 4:-50094307 MsG0480020886.01.T01:CDS
GAGTCTATTTCGTTTGGTCC+TGG 0.436482 4:-50091106 MsG0480020886.01.T01:CDS
GCCTTATTTGCAAGAGCTCC+GGG 0.437027 4:+50090725 None:intergenic
AGCCTTATTTGCAAGAGCTC+CGG 0.440120 4:+50090724 None:intergenic
TGATATGCTTCTTCATGACT+TGG 0.442992 4:-50091264 MsG0480020886.01.T01:intron
TCTAGCATCTCAATCATTGA+TGG 0.444749 4:+50093274 None:intergenic
TACTCTTTGATTGTTTGTTG+TGG 0.445039 4:+50095516 None:intergenic
CTCCATGATCCATTCTTCTG+AGG 0.446930 4:+50091879 None:intergenic
TCCATGATCCATTCTTCTGA+GGG 0.447510 4:+50091880 None:intergenic
ACTCTTTGATTGTTTGTTGT+GGG 0.447829 4:+50095517 None:intergenic
ATGTATCCTTACCCCTTCTC+TGG 0.448426 4:+50091977 None:intergenic
AAGGACAGTAGCAGCTCCTA+TGG 0.468025 4:-50091288 MsG0480020886.01.T01:CDS
AAAATAGGTGAAAGGAAGGC+TGG 0.472868 4:-50094123 MsG0480020886.01.T01:intron
CATAAAGCTCTCCAAGCTCC+TGG 0.473304 4:-50089328 MsG0480020886.01.T01:CDS
CCTCTGTCAATCTGTACAAT+TGG 0.473516 4:-50093011 MsG0480020886.01.T01:CDS
TCAGTAATCCCTCAGAAGAA+TGG 0.473944 4:-50091888 MsG0480020886.01.T01:CDS
AAGTCCGAGTCTATTTCGTT+TGG 0.475727 4:-50091112 MsG0480020886.01.T01:CDS
CAAACATCAGATTCAAAGCC+AGG 0.475978 4:-50091949 MsG0480020886.01.T01:CDS
ACAATTGCAGCTCTTTCTCC+AGG 0.477560 4:+50091088 None:intergenic
ATCCAAGTACCGATTATTGT+AGG 0.478083 4:+50091687 None:intergenic
CAAACAAGCATGCTGATAAA+GGG 0.481031 4:-50092101 MsG0480020886.01.T01:CDS
CAAGTCCATTAAACAAAGAC+TGG 0.481057 4:+50093928 None:intergenic
ACCATCACTCGCCATATCAC+TGG 0.484013 4:+50092128 None:intergenic
AAAGGCCTAAGAATCGTTTC+GGG 0.485000 4:+50091726 None:intergenic
AAATGGCCCTTCCAGGAGCT+TGG 0.485022 4:+50089317 None:intergenic
GTGAGAAATAGCAACAGAAA+TGG 0.485883 4:+50089300 None:intergenic
CATGGTTCGAGGTGCTGCAA+GGG 0.489197 4:-50094054 MsG0480020886.01.T01:CDS
CCATGGTTCGAGGTGCTGCA+AGG 0.490990 4:-50094055 MsG0480020886.01.T01:CDS
AAGAGCTCCGGGAAAACTCT+TGG 0.491553 4:+50090736 None:intergenic
TACAATAATCGGTACTTGGA+TGG 0.492143 4:-50091685 MsG0480020886.01.T01:CDS
CTTGCGGCGCAGTTGAATGT+TGG 0.492333 4:-50094282 MsG0480020886.01.T01:CDS
TGTGTCTTTACTCTATGTCC+AGG 0.495283 4:-50089441 MsG0480020886.01.T01:intron
TTTGTTTAATGGACTTGTGA+AGG 0.496709 4:-50093922 MsG0480020886.01.T01:CDS
AATTATTACGGAGTCTTACT+GGG 0.499853 4:-50094367 MsG0480020886.01.T01:CDS
GGCGCAGTTGAATGTTGGTT+TGG 0.502490 4:-50094277 MsG0480020886.01.T01:CDS
GGCCTACAATAATCGGTACT+TGG 0.505390 4:-50091689 MsG0480020886.01.T01:CDS
GGCCTTACTTTGTTAGCCAA+AGG 0.508968 4:+50091708 None:intergenic
GCAGAATTGATGTTGAATCA+AGG 0.510377 4:-50094393 MsG0480020886.01.T01:CDS
CTCATTAATCTCTTCAGCAA+TGG 0.513124 4:+50094341 None:intergenic
TTGCTGAGGTGAAGAAGTTA+GGG 0.514417 4:-50094503 MsG0480020886.01.T01:CDS
TTTGAAAATAGGTGAAAGGA+AGG 0.516894 4:-50094127 MsG0480020886.01.T01:intron
AGTGATTCTTTCCTAGAACC+TGG 0.521168 4:+50091931 None:intergenic
TCTTGCTGTTGTAGAAGCAT+TGG 0.532428 4:-50090702 MsG0480020886.01.T01:CDS
CAGAATTGATGTTGAATCAA+GGG 0.534268 4:-50094392 MsG0480020886.01.T01:CDS
AGAATCACTTAAAATGAAAG+AGG 0.537589 4:-50091917 MsG0480020886.01.T01:CDS
AATGCCGGCTCTCAAAAGCT+TGG 0.538599 4:-50087910 MsG0480020886.01.T01:CDS
TAATTCAACGACGTTTCGAT+CGG 0.539095 4:+50095267 None:intergenic
AATCTAAGAAAGGCCAGAGA+AGG 0.539351 4:-50091990 MsG0480020886.01.T01:CDS
ATGCTCTAGAACGTGGAAGC+TGG 0.540745 4:-50093237 MsG0480020886.01.T01:intron
TGAACAAATGTTGTAACAAG+AGG 0.541010 4:+50093298 None:intergenic
ATTGCCAATGAAGTAAAAGC+AGG 0.541196 4:-50092177 MsG0480020886.01.T01:CDS
TGTTGCTCGTGTTAGTGCCA+TGG 0.543356 4:-50094072 MsG0480020886.01.T01:CDS
TTGGCAATTGGTAAATCACC+AGG 0.544699 4:+50092192 None:intergenic
TCTTTAGGCACTGCAAAACC+TGG 0.545497 4:-50092210 MsG0480020886.01.T01:CDS
CCTTGCAGCACCTCGAACCA+TGG 0.546871 4:+50094055 None:intergenic
ATCTAAGAAAGGCCAGAGAA+GGG 0.549986 4:-50091989 MsG0480020886.01.T01:CDS
GAAAGGCCAGAGAAGGGGTA+AGG 0.550861 4:-50091983 MsG0480020886.01.T01:CDS
CGTGTTAGTGCCATGGTTCG+AGG 0.554128 4:-50094065 MsG0480020886.01.T01:CDS
GATTGCTTTGACGGAACTTG+CGG 0.554644 4:-50094298 MsG0480020886.01.T01:CDS
TTATCAGGACCACTTTCAGA+TGG 0.555712 4:+50092033 None:intergenic
TCCCTCAGAAGAATGGATCA+TGG 0.557735 4:-50091881 MsG0480020886.01.T01:CDS
TTGTTTAATGGACTTGTGAA+GGG 0.557946 4:-50093921 MsG0480020886.01.T01:CDS
AAGCTCTCCAAGCTCCTGGA+AGG 0.562089 4:-50089324 MsG0480020886.01.T01:CDS
ACTTCCACAAAATCTAAGAA+AGG 0.564114 4:-50092000 MsG0480020886.01.T01:CDS
TGTAGAAGCATTGGAAGGAA+AGG 0.567169 4:-50090693 MsG0480020886.01.T01:intron
TTAGCAAATCCATCTGAAAG+TGG 0.572366 4:-50092042 MsG0480020886.01.T01:CDS
CCAGGACATTTGTGATCGCA+TGG 0.577916 4:-50092265 MsG0480020886.01.T01:intron
CTAACACGAGCAACATAAGC+AGG 0.578723 4:+50094080 None:intergenic
AAAGAACGGAGTTGACGTGC+AGG 0.578778 4:-50091143 MsG0480020886.01.T01:CDS
CAAGAAATGGATGGAGCTAG+TGG 0.585358 4:-50093975 MsG0480020886.01.T01:CDS
TAGGTGAAAGGAAGGCTGGA+AGG 0.586646 4:-50094119 MsG0480020886.01.T01:CDS
CTAGCATCTCAATCATTGAT+GGG 0.589079 4:+50093275 None:intergenic
ATTTGCTAATGTATTTCCAG+TGG 0.589588 4:+50092056 None:intergenic
GTCTGCATTCAGAAGCGTGA+CGG 0.593001 4:-50090459 MsG0480020886.01.T01:CDS
AAGCAGGGTATGATTCAAGC+AGG 0.595048 4:-50092161 MsG0480020886.01.T01:CDS
TGAAGAAGCATATCAACCAT+AGG 0.596680 4:+50091272 None:intergenic
TTTGCAAAAGAAACTTGATG+AGG 0.603716 4:-50091604 MsG0480020886.01.T01:intron
AGCTCTCCAAGCTCCTGGAA+GGG 0.607044 4:-50089323 MsG0480020886.01.T01:CDS
TCTTGAGGTGTAAAAGATGA+GGG 0.608610 4:+50093052 None:intergenic
GGATCAACTGAGAAATGAGA+TGG 0.608853 4:-50094526 MsG0480020886.01.T01:CDS
GATGCTAGATGCTGCTACTG+AGG 0.610729 4:-50093260 MsG0480020886.01.T01:CDS
ATCTTGAGGTGTAAAAGATG+AGG 0.613240 4:+50093051 None:intergenic
GAGCACAACAAATTAAAGAA+CGG 0.615383 4:-50091157 MsG0480020886.01.T01:CDS
AGTGATATGGCGAGTGATGG+TGG 0.615512 4:-50092126 MsG0480020886.01.T01:CDS
AGAATTGATGTTGAATCAAG+GGG 0.617194 4:-50094391 MsG0480020886.01.T01:CDS
TTTAATGGACTTGTGAAGGG+AGG 0.618607 4:-50093918 MsG0480020886.01.T01:CDS
TCCAGTGATATGGCGAGTGA+TGG 0.621503 4:-50092129 MsG0480020886.01.T01:CDS
TCAGAAGCGTGACGGAAGAG+AGG 0.622187 4:-50090451 MsG0480020886.01.T01:intron
GTTGGCTCAGAGTATTGTAA+CGG 0.631287 4:-50094421 MsG0480020886.01.T01:CDS
TTGCCAATGAAGTAAAAGCA+GGG 0.631451 4:-50092176 MsG0480020886.01.T01:CDS
GTGAAAGGAAGGCTGGAAGG+TGG 0.632225 4:-50094116 MsG0480020886.01.T01:CDS
GCTTCTGGAGAGCAAAATGC+CGG 0.633423 4:-50087925 MsG0480020886.01.T01:CDS
GCTGTTGTAGAAGCATTGGA+AGG 0.633896 4:-50090698 MsG0480020886.01.T01:CDS
TCTAAGAAAGGCCAGAGAAG+GGG 0.639113 4:-50091988 MsG0480020886.01.T01:CDS
ATGGTTCGAGGTGCTGCAAG+GGG 0.639892 4:-50094053 MsG0480020886.01.T01:CDS
AATTTACTACAAGAAATGGA+TGG 0.641774 4:-50093984 MsG0480020886.01.T01:CDS
AAGATCAATCGATCTCAACA+TGG 0.659716 4:-50095359 MsG0480020886.01.T01:exon
CTCACTATAGTTCCAAGGCG+CGG 0.660395 4:+50094231 None:intergenic
AGGACCAAACGAAATAGACT+CGG 0.660752 4:+50091108 None:intergenic
ATTTAGTCCAGATATCCTGA+AGG 0.672165 4:-50093325 MsG0480020886.01.T01:intron
ACTGAGGATGCTCTAGAACG+TGG 0.675489 4:-50093244 MsG0480020886.01.T01:CDS
CCAATTGTACAGATTGACAG+AGG 0.688898 4:+50093011 None:intergenic
TTGCTGAAGAGATTAATGAG+AGG 0.692613 4:-50094338 MsG0480020886.01.T01:CDS
GAGAAATGAGATGGTTGCTG+AGG 0.695502 4:-50094517 MsG0480020886.01.T01:CDS
CAATTGTACAGATTGACAGA+GGG 0.701278 4:+50093012 None:intergenic
TGATACAGGATCAGTCTCAG+CGG 0.750039 4:+50089478 None:intergenic
AATGGATGGAGCTAGTGGTG+TGG 0.751839 4:-50093970 MsG0480020886.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTTTAAATATGTTTAA+CGG + Chr4:50093584-50093603 None:intergenic 10.0%
!! AACATATTTAAACATTTATT+TGG - Chr4:50093587-50093606 MsG0480020886.01.T01:intron 10.0%
!! AAAGTGATATTTGTATTAAT+AGG - Chr4:50093930-50093949 MsG0480020886.01.T01:CDS 15.0%
!! AGAAGATTATTTCAAATAAT+TGG - Chr4:50095254-50095273 MsG0480020886.01.T01:CDS 15.0%
!! ATATAATTTAATAATGTTGC+AGG - Chr4:50090190-50090209 MsG0480020886.01.T01:intron 15.0%
!! ATATGAAAACCATAAAATTT+AGG + Chr4:50089485-50089504 None:intergenic 15.0%
!! ATTATTAAATTATATCAGCA+AGG + Chr4:50090185-50090204 None:intergenic 15.0%
!! GAAGATTATTTCAAATAATT+GGG - Chr4:50095255-50095274 MsG0480020886.01.T01:CDS 15.0%
!!! AAATATCACTTTTTAAAATG+AGG + Chr4:50093922-50093941 None:intergenic 15.0%
!!! ATTTGACTTGAAAAATATTT+AGG + Chr4:50095420-50095439 None:intergenic 15.0%
!!! TGTTTTTGTACAATATTTTA+TGG + Chr4:50094704-50094723 None:intergenic 15.0%
!!! TTTACGTCTTTTTTTTTATT+AGG - Chr4:50088138-50088157 MsG0480020886.01.T01:intron 15.0%
!!! TTTTGTTTTTTTTGTTTGAT+GGG + Chr4:50093892-50093911 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTGTGTGT+TGG - Chr4:50089082-50089101 MsG0480020886.01.T01:intron 15.0%
!! AATTACAATGGATATATACT+TGG + Chr4:50094213-50094232 None:intergenic 20.0%
!! AATTTACAAGAACTTATTTG+AGG - Chr4:50093037-50093056 MsG0480020886.01.T01:CDS 20.0%
!! AGATCATATTTCAATTACAA+TGG + Chr4:50094225-50094244 None:intergenic 20.0%
!! ATTATTTCAAATAATTGGGT+AGG - Chr4:50095259-50095278 MsG0480020886.01.T01:CDS 20.0%
!! ATTGTTTATTTGTATTGTTG+CGG + Chr4:50093289-50093308 None:intergenic 20.0%
!! CAACAATACAAATAAACAAT+TGG - Chr4:50093289-50093308 MsG0480020886.01.T01:CDS 20.0%
!! GAATTAATTCATTTATCTTG+AGG + Chr4:50090475-50090494 None:intergenic 20.0%
!! TATTAATTACACGTTCTAAT+TGG - Chr4:50093452-50093471 MsG0480020886.01.T01:intron 20.0%
!! TCAACAATCAATTATCAAAT+TGG + Chr4:50088185-50088204 None:intergenic 20.0%
!! TTAGGATGTAATTAAAAGAT+TGG - Chr4:50088481-50088500 MsG0480020886.01.T01:CDS 20.0%
!!! AAATTGATGCCTAAATTTTA+TGG - Chr4:50089473-50089492 MsG0480020886.01.T01:CDS 20.0%
!!! AACACATTTTTATGTTTTAG+TGG - Chr4:50094429-50094448 MsG0480020886.01.T01:CDS 20.0%
!!! ATGATATATTTGAGGTTAAT+GGG - Chr4:50095203-50095222 MsG0480020886.01.T01:CDS 20.0%
!!! ATTCAATATTTTATAGAGTG+TGG - Chr4:50092794-50092813 MsG0480020886.01.T01:intron 20.0%
!!! ATTTTATGGAAATAAGACTT+GGG + Chr4:50094690-50094709 None:intergenic 20.0%
!!! GAACAATTTTACATTCATAT+CGG - Chr4:50092986-50093005 MsG0480020886.01.T01:intron 20.0%
!!! GATAATTGATTGTTGATAAT+CGG - Chr4:50088189-50088208 MsG0480020886.01.T01:intron 20.0%
!!! GTTAATAAACATGATTTGTA+CGG - Chr4:50090571-50090590 MsG0480020886.01.T01:intron 20.0%
!!! GTTTTGTTTTTTTTGTTTGA+TGG + Chr4:50093893-50093912 None:intergenic 20.0%
!!! TATGATATATTTGAGGTTAA+TGG - Chr4:50095202-50095221 MsG0480020886.01.T01:CDS 20.0%
!!! TATTTTATGGAAATAAGACT+TGG + Chr4:50094691-50094710 None:intergenic 20.0%
!!! TATTTTTCAAGTCAAATCTA+CGG - Chr4:50095423-50095442 MsG0480020886.01.T01:five_prime_UTR 20.0%
!!! TTTGTTTTTTTTGTTTGATG+GGG + Chr4:50093891-50093910 None:intergenic 20.0%
! AAGAATAAGAGTTATATACG+TGG + Chr4:50091754-50091773 None:intergenic 25.0%
! AATCGATCATCCATTAAATT+CGG + Chr4:50088346-50088365 None:intergenic 25.0%
! AATTTACTACAAGAAATGGA+TGG - Chr4:50089302-50089321 MsG0480020886.01.T01:CDS 25.0%
! ACCAAGAAAATTTAATTCTC+TGG - Chr4:50094558-50094577 MsG0480020886.01.T01:intron 25.0%
! ACTTAGATAAAATCATATGC+AGG + Chr4:50091501-50091520 None:intergenic 25.0%
! AGAAGTTGTTTATTGTGTTT+AGG - Chr4:50089547-50089566 MsG0480020886.01.T01:intron 25.0%
! AGAATCACTTAAAATGAAAG+AGG - Chr4:50091369-50091388 MsG0480020886.01.T01:intron 25.0%
! AGATTGTTCTTATAACTAAC+TGG + Chr4:50093501-50093520 None:intergenic 25.0%
! AGCAAGAACAATGAATAATT+AGG - Chr4:50094587-50094606 MsG0480020886.01.T01:intron 25.0%
! AGTAAGAATAGTGCATTATT+TGG - Chr4:50092406-50092425 MsG0480020886.01.T01:intron 25.0%
! AGTTATAAGAACAATCTGAT+CGG - Chr4:50093424-50093443 MsG0480020886.01.T01:intron 25.0%
! ATATCTACATATGATCCAAA+TGG + Chr4:50089883-50089902 None:intergenic 25.0%
! ATCAAAAGCTGAATATCTTT+GGG - Chr4:50094643-50094662 MsG0480020886.01.T01:intron 25.0%
! ATCATCTTCAAACAATTCTA+AGG + Chr4:50091863-50091882 None:intergenic 25.0%
! ATGAATGTTAGTGCATAAAT+GGG + Chr4:50094527-50094546 None:intergenic 25.0%
! ATGTCCTTTCAAACTTATAA+TGG + Chr4:50089719-50089738 None:intergenic 25.0%
! ATTTCCAAATGATAACCATT+TGG - Chr4:50089865-50089884 MsG0480020886.01.T01:intron 25.0%
! CAAAAAAACAAATCAACACA+AGG + Chr4:50091805-50091824 None:intergenic 25.0%
! CAGGAAAAATTAATAGACAA+TGG + Chr4:50094139-50094158 None:intergenic 25.0%
! CCAAGAAAATTTAATTCTCT+GGG - Chr4:50094559-50094578 MsG0480020886.01.T01:intron 25.0%
! CGTGATATATGATATATTTG+AGG - Chr4:50095195-50095214 MsG0480020886.01.T01:CDS 25.0%
! CTGAAACAATTCTTTGTTAA+GGG - Chr4:50092631-50092650 MsG0480020886.01.T01:intron 25.0%
! GAGGAAATAAATAATAGGAA+AGG + Chr4:50090844-50090863 None:intergenic 25.0%
! GCAACTATAAAAAAATGACT+GGG - Chr4:50095002-50095021 MsG0480020886.01.T01:intron 25.0%
! GTAGTGAGGAAATAAATAAT+AGG + Chr4:50090849-50090868 None:intergenic 25.0%
! GTTATAAGAACAATCTAACA+CGG - Chr4:50093505-50093524 MsG0480020886.01.T01:intron 25.0%
! TAAAAATTACTCACATCATC+AGG + Chr4:50094858-50094877 None:intergenic 25.0%
! TAATTATTCATTGTTCTTGC+TGG + Chr4:50094588-50094607 None:intergenic 25.0%
! TATCAAAAGCTGAATATCTT+TGG - Chr4:50094642-50094661 MsG0480020886.01.T01:intron 25.0%
! TCAATTCCTGATAATAACAA+TGG + Chr4:50093776-50093795 None:intergenic 25.0%
! TGCAACTATAAAAAAATGAC+TGG - Chr4:50095001-50095020 MsG0480020886.01.T01:intron 25.0%
! TTATAAGAACAATCTAACAC+GGG - Chr4:50093506-50093525 MsG0480020886.01.T01:intron 25.0%
! TTTGTTAGACTGCAAAAAAT+GGG + Chr4:50090372-50090391 None:intergenic 25.0%
!! AATTTTACATTCATATCGGA+AGG - Chr4:50092990-50093009 MsG0480020886.01.T01:intron 25.0%
!! ATGTGATTAATTTTTCCAGT+GGG - Chr4:50092929-50092948 MsG0480020886.01.T01:intron 25.0%
!! CTTTAAGTTAGTATAGAAGT+GGG + Chr4:50093404-50093423 None:intergenic 25.0%
!! GTTACTTTAATATTTCAGAG+AGG + Chr4:50094940-50094959 None:intergenic 25.0%
!! TCTGAAACAATTCTTTGTTA+AGG - Chr4:50092630-50092649 MsG0480020886.01.T01:intron 25.0%
!! TCTTTAAGTTAGTATAGAAG+TGG + Chr4:50093405-50093424 None:intergenic 25.0%
!! TGATATATTTGAGGTTAATG+GGG - Chr4:50095204-50095223 MsG0480020886.01.T01:CDS 25.0%
!! TTTAAGTTAGTATAGAAGTG+GGG + Chr4:50093403-50093422 None:intergenic 25.0%
!!! AGATTTTGAAATACGGTTAA+GGG + Chr4:50087877-50087896 None:intergenic 25.0%
!!! ATGGTTTTCATATTTGAGTT+AGG - Chr4:50089492-50089511 MsG0480020886.01.T01:CDS 25.0%
!!! CTTGTGTTGATTTGTTTTTT+TGG - Chr4:50091803-50091822 MsG0480020886.01.T01:intron 25.0%
!!! GATTTCACATTTTATTTGTC+AGG - Chr4:50094749-50094768 MsG0480020886.01.T01:intron 25.0%
!!! TATGTGATGGTTTTGAAAAT+AGG - Chr4:50089148-50089167 MsG0480020886.01.T01:intron 25.0%
!!! TTGTTTTTTTTGTTTGATGG+GGG + Chr4:50093890-50093909 None:intergenic 25.0%
!!! TTTTAAAACTTACTGTCAAC+AGG + Chr4:50094158-50094177 None:intergenic 25.0%
!!! TTTTTTTTTGTGTGTTGGTT+TGG - Chr4:50089087-50089106 MsG0480020886.01.T01:intron 25.0%
AAAAACTCACTATAGTTCCA+AGG + Chr4:50089063-50089082 None:intergenic 30.0%
AAAGTAAGGCCTACAATAAT+CGG - Chr4:50091590-50091609 MsG0480020886.01.T01:intron 30.0%
AAATTATTACGGAGTCTTAC+TGG - Chr4:50088918-50088937 MsG0480020886.01.T01:intron 30.0%
AAATTGGATTGTGCAAACTT+AGG + Chr4:50089945-50089964 None:intergenic 30.0%
AACTGTGATTTCATATGTGA+TGG - Chr4:50089135-50089154 MsG0480020886.01.T01:intron 30.0%
AAGATAAAGAAACCAAAAGC+TGG + Chr4:50090874-50090893 None:intergenic 30.0%
AATATCTTTGGGCATCTAAA+GGG - Chr4:50094654-50094673 MsG0480020886.01.T01:intron 30.0%
AATTATTACGGAGTCTTACT+GGG - Chr4:50088919-50088938 MsG0480020886.01.T01:intron 30.0%
ACTGCCATTATAAGTTTGAA+AGG - Chr4:50089712-50089731 MsG0480020886.01.T01:intron 30.0%
ACTTCCACAAAATCTAAGAA+AGG - Chr4:50091286-50091305 MsG0480020886.01.T01:CDS 30.0%
AGAAATTAGGCCGAATTTAA+TGG - Chr4:50088333-50088352 MsG0480020886.01.T01:intron 30.0%
AGAATTGATGTTGAATCAAG+GGG - Chr4:50088895-50088914 MsG0480020886.01.T01:intron 30.0%
AGGAATACTAGAAAAGTCAT+TGG + Chr4:50093351-50093370 None:intergenic 30.0%
ATGGTAAAAAGAATAGTTGC+AGG + Chr4:50090961-50090980 None:intergenic 30.0%
ATGGTTAAGGCTTATTGTAT+AGG - Chr4:50092665-50092684 MsG0480020886.01.T01:intron 30.0%
CAAAAGAGTTCACATGAAAT+TGG + Chr4:50095136-50095155 None:intergenic 30.0%
CAACCATTCAAGTGTAATAT+GGG + Chr4:50094336-50094355 None:intergenic 30.0%
CAATGGATAACCTATGTATT+TGG + Chr4:50094122-50094141 None:intergenic 30.0%
CAGAATTGATGTTGAATCAA+GGG - Chr4:50088894-50088913 MsG0480020886.01.T01:intron 30.0%
CATGAATGTTAGTGCATAAA+TGG + Chr4:50094528-50094547 None:intergenic 30.0%
CATTTATCTTGAGGTCTATA+TGG + Chr4:50090466-50090485 None:intergenic 30.0%
CTAACAAAGCACACATATTT+GGG - Chr4:50090384-50090403 MsG0480020886.01.T01:intron 30.0%
CTGGAAAAATTAATCACATG+AGG + Chr4:50092928-50092947 None:intergenic 30.0%
CTTTGTTAGACTGCAAAAAA+TGG + Chr4:50090373-50090392 None:intergenic 30.0%
GAATCAAGGGGAAATTATTA+CGG - Chr4:50088907-50088926 MsG0480020886.01.T01:intron 30.0%
GAGCACAACAAATTAAAGAA+CGG - Chr4:50092129-50092148 MsG0480020886.01.T01:CDS 30.0%
GCAGAATTTACTACAAGAAA+TGG - Chr4:50089298-50089317 MsG0480020886.01.T01:CDS 30.0%
GTAAAGGTCTAAAAACGATA+TGG - Chr4:50092088-50092107 MsG0480020886.01.T01:CDS 30.0%
GTGTTACAAGTTAAGAAAGA+CGG + Chr4:50094464-50094483 None:intergenic 30.0%
TAACAAAGCACACATATTTG+GGG - Chr4:50090385-50090404 MsG0480020886.01.T01:intron 30.0%
TAAGCAAAAGTGAAAGACAA+GGG + Chr4:50089636-50089655 None:intergenic 30.0%
TAATGCACTATTCTTACTGT+TGG + Chr4:50092404-50092423 None:intergenic 30.0%
TAGCTATTCAATGAAGACAT+TGG + Chr4:50095101-50095120 None:intergenic 30.0%
TATGTTGCATTTAACCATCT+AGG - Chr4:50094387-50094406 MsG0480020886.01.T01:CDS 30.0%
TCTAACAAAGCACACATATT+TGG - Chr4:50090383-50090402 MsG0480020886.01.T01:intron 30.0%
TGAAAATGTGAAATCCTAGA+TGG + Chr4:50094404-50094423 None:intergenic 30.0%
TGAACAAATGTTGTAACAAG+AGG + Chr4:50089991-50090010 None:intergenic 30.0%
TGATATCTGACTAAGATATG+AGG - Chr4:50094250-50094269 MsG0480020886.01.T01:CDS 30.0%
TGATCCAAATGGTTATCATT+TGG + Chr4:50089872-50089891 None:intergenic 30.0%
TGTTTCTTGAGGTTTAGTAA+AGG - Chr4:50092072-50092091 MsG0480020886.01.T01:CDS 30.0%
TTAAGCAAAAGTGAAAGACA+AGG + Chr4:50089637-50089656 None:intergenic 30.0%
TTATTTGTATTGTTGCGGTA+TGG + Chr4:50093284-50093303 None:intergenic 30.0%
TTGTGAAAAGAATGAATCCA+CGG + Chr4:50089597-50089616 None:intergenic 30.0%
TTTCCCATATTACACTTGAA+TGG - Chr4:50094330-50094349 MsG0480020886.01.T01:CDS 30.0%
TTTGAAAATAGGTGAAAGGA+AGG - Chr4:50089159-50089178 MsG0480020886.01.T01:intron 30.0%
TTTGCAAAAGAAACTTGATG+AGG - Chr4:50091682-50091701 MsG0480020886.01.T01:CDS 30.0%
! AACATTTTAGATGCATCTTG+AGG + Chr4:50090252-50090271 None:intergenic 30.0%
! ATTTGCTAATGTATTTCCAG+TGG + Chr4:50091233-50091252 None:intergenic 30.0%
! CATGTGATTAATTTTTCCAG+TGG - Chr4:50092928-50092947 MsG0480020886.01.T01:intron 30.0%
! CCCAGAGAATTAAATTTTCT+TGG + Chr4:50094562-50094581 None:intergenic 30.0%
! CTTCTACCATTGTTATTATC+AGG - Chr4:50093767-50093786 MsG0480020886.01.T01:intron 30.0%
! GCAACTATTCTTTTTACCAT+TGG - Chr4:50090961-50090980 MsG0480020886.01.T01:intron 30.0%
! GTTCAGATGAGTATCTTTTA+AGG + Chr4:50091778-50091797 None:intergenic 30.0%
! GTTTAATGCTACTTAGAATG+TGG - Chr4:50092357-50092376 MsG0480020886.01.T01:intron 30.0%
! TACTCTTTGATTGTTTGTTG+TGG + Chr4:50087773-50087792 None:intergenic 30.0%
! TAGAGTAAAGACACAACTTT+TGG + Chr4:50093840-50093859 None:intergenic 30.0%
! TTCTTCCAGTCTTTGTTTAA+TGG - Chr4:50089353-50089372 MsG0480020886.01.T01:intron 30.0%
! TTTTCTGTTGATGTTTCTTG+AGG - Chr4:50092061-50092080 MsG0480020886.01.T01:CDS 30.0%
! TTTTGCATAGGCATTTACTA+AGG - Chr4:50091979-50091998 MsG0480020886.01.T01:CDS 30.0%
!! ACTCTTTGATTGTTTGTTGT+GGG + Chr4:50087772-50087791 None:intergenic 30.0%
!! ATTCCTGATTTTGAAGAACA+AGG - Chr4:50091445-50091464 MsG0480020886.01.T01:CDS 30.0%
!! ATTTTGTGGAAGTATGTTCT+TGG + Chr4:50091279-50091298 None:intergenic 30.0%
!! TTGTTTAATGGACTTGTGAA+GGG - Chr4:50089365-50089384 MsG0480020886.01.T01:intron 30.0%
!! TTTGTTTAATGGACTTGTGA+AGG - Chr4:50089364-50089383 MsG0480020886.01.T01:intron 30.0%
!!! AAGCCATATTACTGATTTTG+TGG - Chr4:50090498-50090517 MsG0480020886.01.T01:intron 30.0%
!!! GAGATTTTGAAATACGGTTA+AGG + Chr4:50087878-50087897 None:intergenic 30.0%
!!! TGCGTTGAGATTTTGAAATA+CGG + Chr4:50087884-50087903 None:intergenic 30.0%
!!! TGGTTTTGAAAATAGGTGAA+AGG - Chr4:50089155-50089174 MsG0480020886.01.T01:intron 30.0%
!!! TTCTTGTCAAGCTTTTTCAA+AGG + Chr4:50092958-50092977 None:intergenic 30.0%
AAACAACCAAAAGTTTCGTG+TGG + Chr4:50093704-50093723 None:intergenic 35.0%
AAAGGGCCAAAGAAGAAAAA+GGG - Chr4:50091202-50091221 MsG0480020886.01.T01:intron 35.0%
AACTACTAAGTGGGAGTTTA+TGG - Chr4:50093530-50093549 MsG0480020886.01.T01:intron 35.0%
AAGATCAATCGATCTCAACA+TGG - Chr4:50087927-50087946 MsG0480020886.01.T01:CDS 35.0%
ACATCCTAATTTCTTCACCT+CGG + Chr4:50088470-50088489 None:intergenic 35.0%
ACCAAGTATTACTACTGACA+TGG - Chr4:50094093-50094112 MsG0480020886.01.T01:CDS 35.0%
ACCATGTCAGTAGTAATACT+TGG + Chr4:50094097-50094116 None:intergenic 35.0%
ACGCGATCATGATTATTGTT+AGG - Chr4:50088277-50088296 MsG0480020886.01.T01:intron 35.0%
ACTGTGTGCTATAAATTGAC+AGG - Chr4:50091527-50091546 MsG0480020886.01.T01:intron 35.0%
AGACCTTGTTCTTCAAAATC+AGG + Chr4:50091451-50091470 None:intergenic 35.0%
AGTACATCAAATTACTGCCA+TGG - Chr4:50090677-50090696 MsG0480020886.01.T01:intron 35.0%
AGTTACCTGCAAGAATTGAA+TGG + Chr4:50089823-50089842 None:intergenic 35.0%
AGTTATATACGTGGACACAA+CGG + Chr4:50091745-50091764 None:intergenic 35.0%
ATACTAGAAAAGTCATTGGC+TGG + Chr4:50093347-50093366 None:intergenic 35.0%
ATAGACTGCAAATATGAGAC+TGG + Chr4:50092479-50092498 None:intergenic 35.0%
ATATCTTTGGGCATCTAAAG+GGG - Chr4:50094655-50094674 MsG0480020886.01.T01:intron 35.0%
ATCTGTACAATTGGCACTTA+AGG - Chr4:50090284-50090303 MsG0480020886.01.T01:intron 35.0%
ATCTTGAGGTGTAAAAGATG+AGG + Chr4:50090238-50090257 None:intergenic 35.0%
ATGATGCATAACTGAACCAT+CGG + Chr4:50094033-50094052 None:intergenic 35.0%
ATGTAGTCAGATTGCTTTGA+CGG - Chr4:50088979-50088998 MsG0480020886.01.T01:intron 35.0%
ATTGCCAATGAAGTAAAAGC+AGG - Chr4:50091109-50091128 MsG0480020886.01.T01:CDS 35.0%
ATTTAGTCCAGATATCCTGA+AGG - Chr4:50089961-50089980 MsG0480020886.01.T01:intron 35.0%
CAAACAAGCATGCTGATAAA+GGG - Chr4:50091185-50091204 MsG0480020886.01.T01:intron 35.0%
CAAGTCCATTAAACAAAGAC+TGG + Chr4:50089361-50089380 None:intergenic 35.0%
CAATTGTACAGATTGACAGA+GGG + Chr4:50090277-50090296 None:intergenic 35.0%
CATAACACTGTCAAGTTTGT+CGG + Chr4:50089269-50089288 None:intergenic 35.0%
CCAACCATTCAAGTGTAATA+TGG + Chr4:50094337-50094356 None:intergenic 35.0%
CCAAGAATTAAGTTACCGTT+GGG - Chr4:50090922-50090941 MsG0480020886.01.T01:intron 35.0%
CCATATTACACTTGAATGGT+TGG - Chr4:50094334-50094353 MsG0480020886.01.T01:CDS 35.0%
CTACCATTTCGTACATCAAT+TGG - Chr4:50095033-50095052 MsG0480020886.01.T01:intron 35.0%
CTAGCATCTCAATCATTGAT+GGG + Chr4:50090014-50090033 None:intergenic 35.0%
CTCATTAATCTCTTCAGCAA+TGG + Chr4:50088948-50088967 None:intergenic 35.0%
CTTGTACTATGTTGAGAAGT+TGG - Chr4:50088847-50088866 MsG0480020886.01.T01:intron 35.0%
GAAAGATTGAGCTCAGATAA+AGG + Chr4:50094314-50094333 None:intergenic 35.0%
GAAGTATGTTCTTGGTTATC+AGG + Chr4:50091271-50091290 None:intergenic 35.0%
GAATATCTTTGGGCATCTAA+AGG - Chr4:50094653-50094672 MsG0480020886.01.T01:intron 35.0%
GAGAAATGAATTTGTGACTG+AGG - Chr4:50088307-50088326 MsG0480020886.01.T01:intron 35.0%
GATATTTCAACTCAACCAGT+TGG + Chr4:50092710-50092729 None:intergenic 35.0%
GCACCACAAAATCAGTAATA+TGG + Chr4:50090504-50090523 None:intergenic 35.0%
GCAGAATTGATGTTGAATCA+AGG - Chr4:50088893-50088912 MsG0480020886.01.T01:intron 35.0%
GGATGCATGCATATTAATCA+AGG + Chr4:50090805-50090824 None:intergenic 35.0%
GTAACTTAATTCTTGGCAGT+TGG + Chr4:50090918-50090937 None:intergenic 35.0%
GTCAGTAGTAATACTTGGTT+TGG + Chr4:50094092-50094111 None:intergenic 35.0%
GTGAGAAATAGCAACAGAAA+TGG + Chr4:50093989-50094008 None:intergenic 35.0%
GTGCGAAGCATAAATTAATG+AGG + Chr4:50090324-50090343 None:intergenic 35.0%
GTTACCTGCAAGAATTGAAT+GGG + Chr4:50089822-50089841 None:intergenic 35.0%
GTTGATCATAAGCTAGAACT+AGG + Chr4:50089676-50089695 None:intergenic 35.0%
TAAAGGGCCAAAGAAGAAAA+AGG - Chr4:50091201-50091220 MsG0480020886.01.T01:intron 35.0%
TAATTCAACGACGTTTCGAT+CGG + Chr4:50088022-50088041 None:intergenic 35.0%
TACAATAATCGGTACTTGGA+TGG - Chr4:50091601-50091620 MsG0480020886.01.T01:intron 35.0%
TACATGCATTAGGAAACCAA+TGG + Chr4:50090980-50090999 None:intergenic 35.0%
TACTTGGATGGAGAAAAAGA+AGG - Chr4:50091613-50091632 MsG0480020886.01.T01:CDS 35.0%
TATCTGACTAAGATATGAGG+TGG - Chr4:50094253-50094272 MsG0480020886.01.T01:CDS 35.0%
TCAAACAAGCATGCTGATAA+AGG - Chr4:50091184-50091203 MsG0480020886.01.T01:intron 35.0%
TCAGGATATCTGGACTAAAT+TGG + Chr4:50089961-50089980 None:intergenic 35.0%
TCTAGCATCTCAATCATTGA+TGG + Chr4:50090015-50090034 None:intergenic 35.0%
TCTTGAGGTGTAAAAGATGA+GGG + Chr4:50090237-50090256 None:intergenic 35.0%
TGATATGCTTCTTCATGACT+TGG - Chr4:50092022-50092041 MsG0480020886.01.T01:CDS 35.0%
TGTAAAAGATGAGGGCAATA+AGG + Chr4:50090229-50090248 None:intergenic 35.0%
TTAGCAAATCCATCTGAAAG+TGG - Chr4:50091244-50091263 MsG0480020886.01.T01:intron 35.0%
TTAGTATAGAAGTGGGGAAA+AGG + Chr4:50093397-50093416 None:intergenic 35.0%
TTGCCAATGAAGTAAAAGCA+GGG - Chr4:50091110-50091129 MsG0480020886.01.T01:CDS 35.0%
TTGCCAATTGATGTACGAAA+TGG + Chr4:50095039-50095058 None:intergenic 35.0%
TTGCTGAAGAGATTAATGAG+AGG - Chr4:50088948-50088967 MsG0480020886.01.T01:intron 35.0%
TTGGTTTCCTAATGCATGTA+TGG - Chr4:50090980-50090999 MsG0480020886.01.T01:intron 35.0%
! AATACAACAGAGCATCATTC+AGG + Chr4:50095449-50095468 None:intergenic 35.0%
! ACTTTTGGTAGAAGTGATAC+AGG + Chr4:50093825-50093844 None:intergenic 35.0%
! ATGTGATTGATTGTGCTGTT+AGG - Chr4:50088739-50088758 MsG0480020886.01.T01:intron 35.0%
! GAAAAATATTTAGGACTGCG+AGG + Chr4:50095411-50095430 None:intergenic 35.0%
! GCTTTTACTTCATTGGCAAT+TGG + Chr4:50091109-50091128 None:intergenic 35.0%
! GGATTTGATTGCGTCTATTT+TGG - Chr4:50089030-50089049 MsG0480020886.01.T01:intron 35.0%
! TACTAGAAAAGTCATTGGCT+GGG + Chr4:50093346-50093365 None:intergenic 35.0%
! TAGAGACATTAGCTGTTTCA+AGG - Chr4:50091053-50091072 MsG0480020886.01.T01:intron 35.0%
! TCATATTTGAGTTAGGCCTT+TGG - Chr4:50089499-50089518 MsG0480020886.01.T01:CDS 35.0%
! TCTGTTGTATTTTGCTAGCA+TGG - Chr4:50095458-50095477 MsG0480020886.01.T01:five_prime_UTR 35.0%
! TGAAGAAGCATATCAACCAT+AGG + Chr4:50092017-50092036 None:intergenic 35.0%
! TTAGCTGTTTCAAGGTCTTT+AGG - Chr4:50091061-50091080 MsG0480020886.01.T01:intron 35.0%
! TTGAGTTGTCAATGTAGCTA+TGG + Chr4:50090719-50090738 None:intergenic 35.0%
!! ACACGATGGATTATACTGTT+AGG - Chr4:50088428-50088447 MsG0480020886.01.T01:intron 35.0%
!! ATACCCTGCTTTTACTTCAT+TGG + Chr4:50091116-50091135 None:intergenic 35.0%
!! ATCCAAGTACCGATTATTGT+AGG + Chr4:50091602-50091621 None:intergenic 35.0%
!! CTATTTGAGTTGAGTGGAAT+TGG + Chr4:50093190-50093209 None:intergenic 35.0%
!! TGATCTTCCGTTTTTCTTAG+CGG + Chr4:50087821-50087840 None:intergenic 35.0%
!! TTAATGTGTTTTTGATGCCC+AGG - Chr4:50091953-50091972 MsG0480020886.01.T01:CDS 35.0%
!!! GGTAGACATTTTTTACCCAA+CGG + Chr4:50090940-50090959 None:intergenic 35.0%
!!! TACTGATTTTGTGGTGCAAA+TGG - Chr4:50090507-50090526 MsG0480020886.01.T01:intron 35.0%
!!! TGTTGGTTTGGATGTCTTTT+TGG - Chr4:50089099-50089118 MsG0480020886.01.T01:intron 35.0%
!!! TTTTTTTTGTTTGATGGGGG+TGG + Chr4:50093887-50093906 None:intergenic 35.0%
AAAATAGGTGAAAGGAAGGC+TGG - Chr4:50089163-50089182 MsG0480020886.01.T01:intron 40.0%
AAACGCACCGCTAAGAAAAA+CGG - Chr4:50087811-50087830 MsG0480020886.01.T01:three_prime_UTR 40.0%
AAAGGCCTAAGAATCGTTTC+GGG + Chr4:50091563-50091582 None:intergenic 40.0%
AACACGGGAAACTACTAAGT+GGG - Chr4:50093521-50093540 MsG0480020886.01.T01:intron 40.0%
AACGAAATAGACTCGGACTT+TGG + Chr4:50092174-50092193 None:intergenic 40.0%
AACTGCTACTGTGACTCTAT+TGG - Chr4:50094815-50094834 MsG0480020886.01.T01:intron 40.0%
AAGGGCCAAAGAAGAAAAAG+GGG - Chr4:50091203-50091222 MsG0480020886.01.T01:intron 40.0%
AAGTCCGAGTCTATTTCGTT+TGG - Chr4:50092174-50092193 MsG0480020886.01.T01:CDS 40.0%
AATCTAAGAAAGGCCAGAGA+AGG - Chr4:50091296-50091315 MsG0480020886.01.T01:CDS 40.0%
AATGCCTATGCAAAACAACC+TGG + Chr4:50091974-50091993 None:intergenic 40.0%
ACTCAATTCACCATTCCAAC+TGG - Chr4:50092692-50092711 MsG0480020886.01.T01:intron 40.0%
AGGACCAAACGAAATAGACT+CGG + Chr4:50092181-50092200 None:intergenic 40.0%
AGGTCTGCTATGAATGACTT+TGG - Chr4:50091465-50091484 MsG0480020886.01.T01:intron 40.0%
AGTGATTCTTTCCTAGAACC+TGG + Chr4:50091358-50091377 None:intergenic 40.0%
ATCACAAATGTCCTGGTAGA+AGG + Chr4:50091017-50091036 None:intergenic 40.0%
ATCGATCTTGCTGATGTTAC+TGG - Chr4:50088818-50088837 MsG0480020886.01.T01:intron 40.0%
ATCTAAGAAAGGCCAGAGAA+GGG - Chr4:50091297-50091316 MsG0480020886.01.T01:CDS 40.0%
ATGATCCCGAAACGATTCTT+AGG - Chr4:50091555-50091574 MsG0480020886.01.T01:intron 40.0%
ATGCCTATGCAAAACAACCT+GGG + Chr4:50091973-50091992 None:intergenic 40.0%
CAAACATCAGATTCAAAGCC+AGG - Chr4:50091337-50091356 MsG0480020886.01.T01:intron 40.0%
CAAAGGCCTAAGAATCGTTT+CGG + Chr4:50091564-50091583 None:intergenic 40.0%
CACGTGATGTATAGCAGTAT+AGG + Chr4:50094486-50094505 None:intergenic 40.0%
CAGACATTGTTAGATGATGC+TGG - Chr4:50093071-50093090 MsG0480020886.01.T01:CDS 40.0%
CAGAGAACCATACATGCATT+AGG + Chr4:50090990-50091009 None:intergenic 40.0%
CCAATTGTACAGATTGACAG+AGG + Chr4:50090278-50090297 None:intergenic 40.0%
CCACTCAACTCAAATAGTGA+TGG - Chr4:50093193-50093212 MsG0480020886.01.T01:intron 40.0%
CCCAACGGTAACTTAATTCT+TGG + Chr4:50090925-50090944 None:intergenic 40.0%
CCTCTGTCAATCTGTACAAT+TGG - Chr4:50090275-50090294 MsG0480020886.01.T01:intron 40.0%
CGACAAACTTGACAGTGTTA+TGG - Chr4:50089267-50089286 MsG0480020886.01.T01:intron 40.0%
CTAGAACTAGGCGAAATGTT+TGG + Chr4:50089664-50089683 None:intergenic 40.0%
CTGCAATTGTAAGACTTGAG+AGG - Chr4:50092211-50092230 MsG0480020886.01.T01:CDS 40.0%
GACATGGTCACCAAATACAT+AGG - Chr4:50094109-50094128 MsG0480020886.01.T01:CDS 40.0%
GATATGGATTCAACCTTTGC+AGG - Chr4:50092104-50092123 MsG0480020886.01.T01:CDS 40.0%
GCCAAGAATTAAGTTACCGT+TGG - Chr4:50090921-50090940 MsG0480020886.01.T01:intron 40.0%
GGATCAACTGAGAAATGAGA+TGG - Chr4:50088760-50088779 MsG0480020886.01.T01:intron 40.0%
GGTATGTTCTATATGTCCGA+TGG - Chr4:50094014-50094033 MsG0480020886.01.T01:CDS 40.0%
GGTCTGCTATGAATGACTTT+GGG - Chr4:50091466-50091485 MsG0480020886.01.T01:intron 40.0%
GGTTGCTCAGATTATGGTTA+AGG - Chr4:50092652-50092671 MsG0480020886.01.T01:intron 40.0%
GTAAGTGCTTGTTTACACGA+TGG - Chr4:50088414-50088433 MsG0480020886.01.T01:intron 40.0%
GTGACTGAGGTGAAGAAATT+AGG - Chr4:50088320-50088339 MsG0480020886.01.T01:intron 40.0%
GTTAAGGGTTGCTCAGATTA+TGG - Chr4:50092646-50092665 MsG0480020886.01.T01:intron 40.0%
GTTATATACGTGGACACAAC+GGG + Chr4:50091744-50091763 None:intergenic 40.0%
TAACACGGGAAACTACTAAG+TGG - Chr4:50093520-50093539 MsG0480020886.01.T01:intron 40.0%
TAATATGCATGCATCCTGCT+GGG - Chr4:50090809-50090828 MsG0480020886.01.T01:intron 40.0%
TACGACGTTCTGCAAAAACT+TGG - Chr4:50089786-50089805 MsG0480020886.01.T01:intron 40.0%
TATGAAGTAAGCCACTCCAA+AGG + Chr4:50089518-50089537 None:intergenic 40.0%
TCACAAATGTCCTGGTAGAA+GGG + Chr4:50091016-50091035 None:intergenic 40.0%
TCAGTAATCCCTCAGAAGAA+TGG - Chr4:50091398-50091417 MsG0480020886.01.T01:intron 40.0%
TCCATGATCCATTCTTCTGA+GGG + Chr4:50091409-50091428 None:intergenic 40.0%
TCGATCGGATAATCGAATAC+TGG + Chr4:50088007-50088026 None:intergenic 40.0%
TGACTAAGATATGAGGTGGT+TGG - Chr4:50094257-50094276 MsG0480020886.01.T01:CDS 40.0%
TGCAACGTTACTCTGCAATT+CGG - Chr4:50093725-50093744 MsG0480020886.01.T01:intron 40.0%
TGTGTCTTTACTCTATGTCC+AGG - Chr4:50093845-50093864 MsG0480020886.01.T01:intron 40.0%
TTAATATGCATGCATCCTGC+TGG - Chr4:50090808-50090827 MsG0480020886.01.T01:intron 40.0%
TTATCAGGACCACTTTCAGA+TGG + Chr4:50091256-50091275 None:intergenic 40.0%
TTCAACTCAACCAGTTGGAA+TGG + Chr4:50092705-50092724 None:intergenic 40.0%
TTGCTGAGGTGAAGAAGTTA+GGG - Chr4:50088783-50088802 MsG0480020886.01.T01:intron 40.0%
TTGGCAATTGGTAAATCACC+AGG + Chr4:50091097-50091116 None:intergenic 40.0%
! ACTAGAAAAGTCATTGGCTG+GGG + Chr4:50093345-50093364 None:intergenic 40.0%
! GCAGTCTATCTTCTTTTGTG+AGG - Chr4:50092490-50092509 MsG0480020886.01.T01:intron 40.0%
! GCTTTCCCCTTTTTCTTCTT+TGG + Chr4:50091211-50091230 None:intergenic 40.0%
! TGGCACTGAGATTATCTGTT+TGG - Chr4:50093097-50093116 MsG0480020886.01.T01:intron 40.0%
!! AAAACCAAGCTTTTGAGAGC+CGG + Chr4:50095383-50095402 None:intergenic 40.0%
!! CCATCACTATTTGAGTTGAG+TGG + Chr4:50093196-50093215 None:intergenic 40.0%
!! CTGGCCTTTCTTAGATTTTG+TGG + Chr4:50091293-50091312 None:intergenic 40.0%
!! GAATGCTTAGTTGATGACCA+TGG + Chr4:50090697-50090716 None:intergenic 40.0%
!! GCAAATATGAGACTGGTCTA+TGG + Chr4:50092472-50092491 None:intergenic 40.0%
!! GGTATTTGCTGTTGCTCAAA+AGG - Chr4:50089568-50089587 MsG0480020886.01.T01:intron 40.0%
!! GTTGGCTCAGAGTATTGTAA+CGG - Chr4:50088865-50088884 MsG0480020886.01.T01:intron 40.0%
!! TCTTGCTGTTGTAGAAGCAT+TGG - Chr4:50092584-50092603 MsG0480020886.01.T01:intron 40.0%
!! TGTAGAAGCATTGGAAGGAA+AGG - Chr4:50092593-50092612 MsG0480020886.01.T01:intron 40.0%
!! TGTTGCTATTTCTCACTTGC+AGG - Chr4:50093993-50094012 MsG0480020886.01.T01:CDS 40.0%
!! TGTTTGTTGTGGGACGAAAT+TGG + Chr4:50087762-50087781 None:intergenic 40.0%
!! TTGGCTTGCTGCTAATATTC+AGG + Chr4:50093679-50093698 None:intergenic 40.0%
!! TTGTTAGATGATGCTGGTTC+TGG - Chr4:50093077-50093096 MsG0480020886.01.T01:CDS 40.0%
!! TTTAATGGACTTGTGAAGGG+AGG - Chr4:50089368-50089387 MsG0480020886.01.T01:intron 40.0%
!!! GCTTTTTCGCAGAACAGATT+CGG + Chr4:50093235-50093254 None:intergenic 40.0%
AAAGGAAGATAAACCCCAGC+AGG + Chr4:50090826-50090845 None:intergenic 45.0%
AAGAAAAAGGGGAAAGCCAC+TGG - Chr4:50091214-50091233 MsG0480020886.01.T01:intron 45.0%
AAGCAGGGTATGATTCAAGC+AGG - Chr4:50091125-50091144 MsG0480020886.01.T01:CDS 45.0%
AATATGCATGCATCCTGCTG+GGG - Chr4:50090810-50090829 MsG0480020886.01.T01:intron 45.0%
ACAAATGTCCTGGTAGAAGG+GGG + Chr4:50091014-50091033 None:intergenic 45.0%
ACAACTGTCTTCCTGCACAA+CGG + Chr4:50095312-50095331 None:intergenic 45.0%
ACAATTGCAGCTCTTTCTCC+AGG + Chr4:50092201-50092220 None:intergenic 45.0%
ACCAAAAGCTGGATGTAGTG+AGG + Chr4:50090863-50090882 None:intergenic 45.0%
AGATCCCTTGCACAGCATTA+GGG + Chr4:50090100-50090119 None:intergenic 45.0%
AGGAGTGATCAAACTTCTGC+TGG + Chr4:50094920-50094939 None:intergenic 45.0%
AGGTTTGCCTTCAGGATATC+TGG + Chr4:50089971-50089990 None:intergenic 45.0%
ATCACATGAGGTTTCACGTC+AGG + Chr4:50092916-50092935 None:intergenic 45.0%
ATGTATCCTTACCCCTTCTC+TGG + Chr4:50091312-50091331 None:intergenic 45.0%
CAAGAAATGGATGGAGCTAG+TGG - Chr4:50089311-50089330 MsG0480020886.01.T01:CDS 45.0%
CACAAATGTCCTGGTAGAAG+GGG + Chr4:50091015-50091034 None:intergenic 45.0%
CAGATTCAAAGCCAGGTTCT+AGG - Chr4:50091344-50091363 MsG0480020886.01.T01:intron 45.0%
CAGCTGTGAGTGACATGATA+CGG - Chr4:50089432-50089451 MsG0480020886.01.T01:intron 45.0%
CCAAAAGTTTCGTGTGGAGT+TGG + Chr4:50093698-50093717 None:intergenic 45.0%
CGAAACGATTCTTAGGCCTT+TGG - Chr4:50091562-50091581 MsG0480020886.01.T01:intron 45.0%
CTAACACGAGCAACATAAGC+AGG + Chr4:50089209-50089228 None:intergenic 45.0%
CTCCATGATCCATTCTTCTG+AGG + Chr4:50091410-50091429 None:intergenic 45.0%
GAGAAATGAGATGGTTGCTG+AGG - Chr4:50088769-50088788 MsG0480020886.01.T01:intron 45.0%
GAGCTTCTTCATACTGCTTC+TGG - Chr4:50088078-50088097 MsG0480020886.01.T01:intron 45.0%
GAGTCTATTTCGTTTGGTCC+TGG - Chr4:50092180-50092199 MsG0480020886.01.T01:CDS 45.0%
GATTGCTTTGACGGAACTTG+CGG - Chr4:50088988-50089007 MsG0480020886.01.T01:intron 45.0%
GGCCTACAATAATCGGTACT+TGG - Chr4:50091597-50091616 MsG0480020886.01.T01:intron 45.0%
GGCCTTACTTTGTTAGCCAA+AGG + Chr4:50091581-50091600 None:intergenic 45.0%
GGCCTTTGGCTAACAAAGTA+AGG - Chr4:50091576-50091595 MsG0480020886.01.T01:intron 45.0%
GTAACAAGAGGTTTGCCTTC+AGG + Chr4:50089979-50089998 None:intergenic 45.0%
GTTGAGTGAGTCCAGTGATA+TGG - Chr4:50091147-50091166 MsG0480020886.01.T01:CDS 45.0%
GTTGCCGAGGTGAAGAAATT+AGG - Chr4:50088463-50088482 MsG0480020886.01.T01:CDS 45.0%
GTTGCTGAGGTGAAGAAGTT+AGG - Chr4:50088782-50088801 MsG0480020886.01.T01:intron 45.0%
TAGAACGTGGAAGCTGGTAA+GGG - Chr4:50090055-50090074 MsG0480020886.01.T01:intron 45.0%
TAGACGAGCAGCAAGATTAG+AGG + Chr4:50093371-50093390 None:intergenic 45.0%
TCACATGAGGTTTCACGTCA+GGG + Chr4:50092915-50092934 None:intergenic 45.0%
TCCCTCAGAAGAATGGATCA+TGG - Chr4:50091405-50091424 MsG0480020886.01.T01:intron 45.0%
TCTAAGAAAGGCCAGAGAAG+GGG - Chr4:50091298-50091317 MsG0480020886.01.T01:CDS 45.0%
TCTGAGTACAAGAGAGCTTC+TGG - Chr4:50095346-50095365 MsG0480020886.01.T01:exon 45.0%
TGATACAGGATCAGTCTCAG+CGG + Chr4:50093811-50093830 None:intergenic 45.0%
TGTTGCTCAAAAGGAATCCG+TGG - Chr4:50089577-50089596 MsG0480020886.01.T01:intron 45.0%
TTCCTGCACAACGGAAAAAG+AGG + Chr4:50095303-50095322 None:intergenic 45.0%
TTGTTGTGCTCATCCTGCAA+AGG + Chr4:50092120-50092139 None:intergenic 45.0%
! AAAGTCATTGGCTGGGGAAA+AGG + Chr4:50093339-50093358 None:intergenic 45.0%
! AAGTCATTGGCTGGGGAAAA+GGG + Chr4:50093338-50093357 None:intergenic 45.0%
! CCAACTCCACACGAAACTTT+TGG - Chr4:50093695-50093714 MsG0480020886.01.T01:intron 45.0%
! CTGCAAGAATTGAATGGGCT+GGG + Chr4:50089817-50089836 None:intergenic 45.0%
! TCCTCACTACATCCAGCTTT+TGG - Chr4:50090859-50090878 MsG0480020886.01.T01:intron 45.0%
! TCTTTAGGCACTGCAAAACC+TGG - Chr4:50091076-50091095 MsG0480020886.01.T01:intron 45.0%
! TGAAGGGAGGCGAGATTTTA+GGG - Chr4:50089381-50089400 MsG0480020886.01.T01:intron 45.0%
! TTCCTCTTTTTCCGTTGTGC+AGG - Chr4:50095298-50095317 MsG0480020886.01.T01:CDS 45.0%
! TTGCAGTCCAAGAGTTTTCC+CGG - Chr4:50092543-50092562 MsG0480020886.01.T01:intron 45.0%
! TTTGAGTTAGGCCTTTGGAG+TGG - Chr4:50089504-50089523 MsG0480020886.01.T01:intron 45.0%
!! AGCCTTATTTGCAAGAGCTC+CGG + Chr4:50092565-50092584 None:intergenic 45.0%
!! ATGCCCAGGTTGTTTTGCAT+AGG - Chr4:50091967-50091986 MsG0480020886.01.T01:CDS 45.0%
!! CAAATGGTGCTACTAAGGCT+CGG - Chr4:50090523-50090542 MsG0480020886.01.T01:intron 45.0%
!! GCTGTTGTAGAAGCATTGGA+AGG - Chr4:50092588-50092607 MsG0480020886.01.T01:intron 45.0%
!! TGCAAGAATTGAATGGGCTG+GGG + Chr4:50089816-50089835 None:intergenic 45.0%
!! TGGTGCAAATGGTGCTACTA+AGG - Chr4:50090518-50090537 MsG0480020886.01.T01:intron 45.0%
!!! CTTTTTCAAAGGCAACCCAC+TGG + Chr4:50092947-50092966 None:intergenic 45.0%
AAAAGGGCTGACAGTGTGTC+TGG + Chr4:50093322-50093341 None:intergenic 50.0%
AAAGAACGGAGTTGACGTGC+AGG - Chr4:50092143-50092162 MsG0480020886.01.T01:CDS 50.0%
AAGAGCTCCGGGAAAACTCT+TGG + Chr4:50092553-50092572 None:intergenic 50.0%
AAGGACAGTAGCAGCTCCTA+TGG - Chr4:50091998-50092017 MsG0480020886.01.T01:CDS 50.0%
AATGGATGGAGCTAGTGGTG+TGG - Chr4:50089316-50089335 MsG0480020886.01.T01:CDS 50.0%
ACCATCACTCGCCATATCAC+TGG + Chr4:50091161-50091180 None:intergenic 50.0%
AGTGATATGGCGAGTGATGG+TGG - Chr4:50091160-50091179 MsG0480020886.01.T01:CDS 50.0%
ATCCCTTGCACAGCATTAGG+GGG + Chr4:50090098-50090117 None:intergenic 50.0%
CAAATGTCCTGGTAGAAGGG+GGG + Chr4:50091013-50091032 None:intergenic 50.0%
CAGGAGCTTGGAGAGCTTTA+TGG + Chr4:50093960-50093979 None:intergenic 50.0%
CATAAAGCTCTCCAAGCTCC+TGG - Chr4:50093958-50093977 MsG0480020886.01.T01:CDS 50.0%
CCAGCCCATTCAATTCTTGC+AGG - Chr4:50089815-50089834 MsG0480020886.01.T01:intron 50.0%
CCAGGACATTTGTGATCGCA+TGG - Chr4:50091021-50091040 MsG0480020886.01.T01:intron 50.0%
CCATGCGATCACAAATGTCC+TGG + Chr4:50091024-50091043 None:intergenic 50.0%
CCTGCAAGAATTGAATGGGC+TGG + Chr4:50089818-50089837 None:intergenic 50.0%
CGTATCATGTCACTCACAGC+TGG + Chr4:50089434-50089453 None:intergenic 50.0%
CTAGAACGTGGAAGCTGGTA+AGG - Chr4:50090054-50090073 MsG0480020886.01.T01:intron 50.0%
CTCACTATAGTTCCAAGGCG+CGG + Chr4:50089058-50089077 None:intergenic 50.0%
GAGATCCCTTGCACAGCATT+AGG + Chr4:50090101-50090120 None:intergenic 50.0%
GATCAACTGAGATGTTGCCG+AGG - Chr4:50088450-50088469 MsG0480020886.01.T01:CDS 50.0%
GATCCCTTGCACAGCATTAG+GGG + Chr4:50090099-50090118 None:intergenic 50.0%
GATGCTAGATGCTGCTACTG+AGG - Chr4:50090026-50090045 MsG0480020886.01.T01:intron 50.0%
GGAGTAGCACTCAAGTTACC+TGG + Chr4:50093866-50093885 None:intergenic 50.0%
TAGGTGAAAGGAAGGCTGGA+AGG - Chr4:50089167-50089186 MsG0480020886.01.T01:intron 50.0%
TCCAGTGATATGGCGAGTGA+TGG - Chr4:50091157-50091176 MsG0480020886.01.T01:CDS 50.0%
TCCCGGAGCTCTTGCAAATA+AGG - Chr4:50092560-50092579 MsG0480020886.01.T01:intron 50.0%
TGTTGCTCGTGTTAGTGCCA+TGG - Chr4:50089214-50089233 MsG0480020886.01.T01:intron 50.0%
! GCTGAGCAGCAGCTTTATGA+AGG - Chr4:50090418-50090437 MsG0480020886.01.T01:intron 50.0%
! GCTTCTGGAGAGCAAAATGC+CGG - Chr4:50095361-50095380 MsG0480020886.01.T01:exon 50.0%
! GGCGCAGTTGAATGTTGGTT+TGG - Chr4:50089009-50089028 MsG0480020886.01.T01:intron 50.0%
! GTCTGCATTCAGAAGCGTGA+CGG - Chr4:50092827-50092846 MsG0480020886.01.T01:intron 50.0%
! GTGAAGGGAGGCGAGATTTT+AGG - Chr4:50089380-50089399 MsG0480020886.01.T01:intron 50.0%
!! AATGCCGGCTCTCAAAAGCT+TGG - Chr4:50095376-50095395 MsG0480020886.01.T01:five_prime_UTR 50.0%
!! ACAGATTCGGTGAAAGGAGC+TGG + Chr4:50093222-50093241 None:intergenic 50.0%
!! ACTGAGGATGCTCTAGAACG+TGG - Chr4:50090042-50090061 MsG0480020886.01.T01:intron 50.0%
!! AGGTGCTGCAAGGGGTATTA+CGG - Chr4:50089241-50089260 MsG0480020886.01.T01:intron 50.0%
!! ATGCTCTAGAACGTGGAAGC+TGG - Chr4:50090049-50090068 MsG0480020886.01.T01:intron 50.0%
!! CAGATTCGGTGAAAGGAGCT+GGG + Chr4:50093221-50093240 None:intergenic 50.0%
!! CGCAGAACAGATTCGGTGAA+AGG + Chr4:50093228-50093247 None:intergenic 50.0%
!! GCCTTATTTGCAAGAGCTCC+GGG + Chr4:50092564-50092583 None:intergenic 50.0%
AAATGGCCCTTCCAGGAGCT+TGG + Chr4:50093972-50093991 None:intergenic 55.0%
AAGCTCTCCAAGCTCCTGGA+AGG - Chr4:50093962-50093981 MsG0480020886.01.T01:CDS 55.0%
AGCTCTCCAAGCTCCTGGAA+GGG - Chr4:50093963-50093982 MsG0480020886.01.T01:CDS 55.0%
CACCCCCTAATGCTGTGCAA+GGG - Chr4:50090093-50090112 MsG0480020886.01.T01:intron 55.0%
CCAATGTACTCCAGCGCGAA+CGG + Chr4:50089408-50089427 None:intergenic 55.0%
CGTGTTAGTGCCATGGTTCG+AGG - Chr4:50089221-50089240 MsG0480020886.01.T01:intron 55.0%
CTTGCACAGCATTAGGGGGT+GGG + Chr4:50090094-50090113 None:intergenic 55.0%
CTTGCGGCGCAGTTGAATGT+TGG - Chr4:50089004-50089023 MsG0480020886.01.T01:intron 55.0%
GAAAGGCCAGAGAAGGGGTA+AGG - Chr4:50091303-50091322 MsG0480020886.01.T01:CDS 55.0%
GCAACAGAAATGGCCCTTCC+AGG + Chr4:50093979-50093998 None:intergenic 55.0%
GCTAGTGGTGTGGCTGTTGA+TGG - Chr4:50089326-50089345 MsG0480020886.01.T01:CDS 55.0%
GTGAAAGGAAGGCTGGAAGG+TGG - Chr4:50089170-50089189 MsG0480020886.01.T01:intron 55.0%
TTGCACAGCATTAGGGGGTG+GGG + Chr4:50090093-50090112 None:intergenic 55.0%
! TCAGAAGCGTGACGGAAGAG+AGG - Chr4:50092835-50092854 MsG0480020886.01.T01:intron 55.0%
!! ATGGTTCGAGGTGCTGCAAG+GGG - Chr4:50089233-50089252 MsG0480020886.01.T01:intron 55.0%
!! CATGGTTCGAGGTGCTGCAA+GGG - Chr4:50089232-50089251 MsG0480020886.01.T01:intron 55.0%
!!! ATTTTAGGGTCCGTTCGCGC+TGG - Chr4:50089395-50089414 MsG0480020886.01.T01:intron 55.0%
!!! TCTATTTTGGAGCCGCGCCT+TGG - Chr4:50089043-50089062 MsG0480020886.01.T01:intron 55.0%
CCACCCCCTAATGCTGTGCA+AGG - Chr4:50090092-50090111 MsG0480020886.01.T01:intron 60.0%
CCGTTCGCGCTGGAGTACAT+TGG - Chr4:50089405-50089424 MsG0480020886.01.T01:intron 60.0%
CCTTGCACAGCATTAGGGGG+TGG + Chr4:50090095-50090114 None:intergenic 60.0%
CCTTGCAGCACCTCGAACCA+TGG + Chr4:50089234-50089253 None:intergenic 60.0%
TGCACAGCATTAGGGGGTGG+GGG + Chr4:50090092-50090111 None:intergenic 60.0%
TTCTCTGCCCCCCTTCTACC+AGG - Chr4:50091003-50091022 MsG0480020886.01.T01:intron 60.0%
!! CCATGGTTCGAGGTGCTGCA+AGG - Chr4:50089231-50089250 MsG0480020886.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 50087742 50095566 50087742 ID=MsG0480020886.01;Name=MsG0480020886.01
Chr4 mRNA 50087742 50095566 50087742 ID=MsG0480020886.01.T01;Parent=MsG0480020886.01;Name=MsG0480020886.01.T01;_AED=0.43;_eAED=0.43;_QI=204|0.87|0.94|1|0.93|0.88|17|145|749
Chr4 exon 50087742 50087988 50087742 ID=MsG0480020886.01.T01:exon:886;Parent=MsG0480020886.01.T01
Chr4 exon 50088445 50088537 50088445 ID=MsG0480020886.01.T01:exon:885;Parent=MsG0480020886.01.T01
Chr4 exon 50089294 50089356 50089294 ID=MsG0480020886.01.T01:exon:884;Parent=MsG0480020886.01.T01
Chr4 exon 50089442 50089519 50089442 ID=MsG0480020886.01.T01:exon:883;Parent=MsG0480020886.01.T01
Chr4 exon 50090297 50090360 50090297 ID=MsG0480020886.01.T01:exon:882;Parent=MsG0480020886.01.T01
Chr4 exon 50090452 50090498 50090452 ID=MsG0480020886.01.T01:exon:881;Parent=MsG0480020886.01.T01
Chr4 exon 50090694 50090759 50090694 ID=MsG0480020886.01.T01:exon:880;Parent=MsG0480020886.01.T01
Chr4 exon 50091090 50091182 50091090 ID=MsG0480020886.01.T01:exon:879;Parent=MsG0480020886.01.T01
Chr4 exon 50091265 50091333 50091265 ID=MsG0480020886.01.T01:exon:878;Parent=MsG0480020886.01.T01
Chr4 exon 50091414 50091479 50091414 ID=MsG0480020886.01.T01:exon:877;Parent=MsG0480020886.01.T01
Chr4 exon 50091605 50091759 50091605 ID=MsG0480020886.01.T01:exon:876;Parent=MsG0480020886.01.T01
Chr4 exon 50091842 50092283 50091842 ID=MsG0480020886.01.T01:exon:875;Parent=MsG0480020886.01.T01
Chr4 exon 50093003 50093096 50093003 ID=MsG0480020886.01.T01:exon:874;Parent=MsG0480020886.01.T01
Chr4 exon 50093238 50093336 50093238 ID=MsG0480020886.01.T01:exon:873;Parent=MsG0480020886.01.T01
Chr4 exon 50093906 50094138 50093906 ID=MsG0480020886.01.T01:exon:872;Parent=MsG0480020886.01.T01
Chr4 exon 50094236 50094547 50094236 ID=MsG0480020886.01.T01:exon:871;Parent=MsG0480020886.01.T01
Chr4 exon 50095189 50095566 50095189 ID=MsG0480020886.01.T01:exon:870;Parent=MsG0480020886.01.T01
Chr4 five_prime_UTR 50095363 50095566 50095363 ID=MsG0480020886.01.T01:five_prime_utr;Parent=MsG0480020886.01.T01
Chr4 CDS 50095189 50095362 50095189 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50094236 50094547 50094236 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50093906 50094138 50093906 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50093238 50093336 50093238 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50093003 50093096 50093003 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50091842 50092283 50091842 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50091605 50091759 50091605 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50091414 50091479 50091414 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50091265 50091333 50091265 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50091090 50091182 50091090 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50090694 50090759 50090694 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50090452 50090498 50090452 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50090297 50090360 50090297 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50089442 50089519 50089442 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50089294 50089356 50089294 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50088445 50088537 50088445 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 CDS 50087887 50087988 50087887 ID=MsG0480020886.01.T01:cds;Parent=MsG0480020886.01.T01
Chr4 three_prime_UTR 50087742 50087886 50087742 ID=MsG0480020886.01.T01:three_prime_utr;Parent=MsG0480020886.01.T01
Gene Sequence

>MsG0480020886.01.T01

ATGGACGACGAATTGCTCGAATTGCAGCGACAATTTGAGTTCGCTCAACAAGCAAAATCCAGTATTCGATTATCCGATCGAAACGTCGTTGAATTAGTTCAAAAATTGCAACAACTTCAATTCATTGATTTTGAGCTTCTTCATACTGCTTCTGGCAAAGAATACATCACTCTCGATCAACTGAGAAATGAGATGGTTGCTGAGGTGAAGAAGTTAGGGCGAATTTCTGTGATCGATCTTGCTGATGTTACTGGAGTTGACTTGTACTATGTTGAGAAGTTGGCTCAGAGTATTGTAACGGATCACGCAGAATTGATGTTGAATCAAGGGGAAATTATTACGGAGTCTTACTGGGATTCCATTGCTGAAGAGATTAATGAGAGGCTTCAAGAATGTAGTCAGATTGCTTTGACGGAACTTGCGGCGCAGTTGAATGTTGGTTTGGATTTGATTGCGTCTATTTTGGAGCCGCGCCTTGGAACTATAGTGAAAGGAAGGCTGGAAGGTGGACAATTGTATACTCCTGCTTATGTTGCTCGTGTTAGTGCCATGGTTCGAGGTGCTGCAAGGGGTATTACGGTTCCGACAAACTTGACAGTGTTATGGAGCTCATTGCAGAATTTACTACAAGAAATGGATGGAGCTAGTGGTGTGGCTGTTGATGGATCTTTCTTCCAGTCTTTGTTTAATGGACTTGTGAAGGGAGGCGAGATTTTAGGATATCCTGAAGGCAAACCTCTTGTTACAACATTTGTTCACCCATCAATGATTGAGATGCTAGATGCTGCTACTGAGGATGCTCTAGAACGTGGAAGCTGGAGTGATTCTCTTTCCTTATTGCCCTCATCTTTTACACCTCAAGATGCATCTAAAATGTTGTCCCTCTGTCAATCTGTACAATTGGCACTTAAGGACATTTGTGATCGCATGGTGAAAGAATTAGAGACATTAGCTGTTTCAAGGTCTTTAGGCACTGCAAAACCTGGTGATTTACCAATTGCCAATGAAGTAAAAGCAGGGTATGATTCAAGCAGGTTGAGTGAGTCCAGTGATATGGCGAGTGATGGTGGTTCAAACAAGCATGCTGATAAAGGGCCAAAGAAGAAAAAGGGGAAAGCCACTGGAAATACATTAGCAAATCCATCTGAAAGTGGTCCTGATAACCAAGAACATACTTCCACAAAATCTAAGAAAGGCCAGAGAAGGGGTAAGGATACATCTTCACAAACATCAGATTCAAAGCCAGGTTCTAGGAAAGAATCACTTAAAATGAAAGAGGATAATCTCAGTAATCCCTCAGAAGAATGGATCATGGAGAAGATTACAGCATTGATTCCTGATTTTGAAGAACAAGGTATTGATGATCCCGAAACGATTCTTAGGCCTTTGGCTAACAAAGTAAGGCCTACAATAATCGGTACTTGGATGGAGAAAAAGAAGGCATTGTTTAAAGACAATGCAGAAAGAATGAAACAATTGCTTGATAGTTTGCAAAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGGCATTTACTAAGGACAGTAGCAGCTCCTATGGTTGATATGCTTCTTCATGACTTGGATGAGCACAACAAATTAAAGAACGGAGTTGACGTGCAGGAATCTCCAAAGTCCGAGTCTATTTCGTTTGGTCCTGGAGAAAGAGCTGCAATTTCCAAGAGTTTTCCCGGAGCTCTTGCAAATAAGGCTCTTGCTGTTGTAGAAGCATTGGAAGGAAAGAGTGTGGAAACATTCATGTCTGCATTCAGAAGCGTGACGGAAGAGAGTGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACAATTTTACATTCATATCGGAAGGAATTGACGTCTCAAGTATCCGCTGAGACTGATCCTGTATCACTTCTACCAAAAGTTGTGTCTTTACTCTATGTCCAGGTTTACCATAAAGCTCTCCAAGCTCCTGGAAGGGCCATTTCTGTTGCTATTTCTCACTTGCAGGATAAGCTAGACGAGTCAGCATGCAAGACTTTAGCTGATTATCAAACTGCTACTGTGACTCTATTGGCATTATTATCAGCTGCTCCTGATGATGAAGACAGTTGTGCATCTGACAGAGTTCTGAGTACAAGAGAGCTTCTGGAGAGCAAAATGCCGGCTCTCAAAAGCTTGGTTTTGACTACCTCGCAGTCCTAA

Protein sequence

>MsG0480020886.01.T01

MDDELLELQRQFEFAQQAKSSIRLSDRNVVELVQKLQQLQFIDFELLHTASGKEYITLDQLRNEMVAEVKKLGRISVIDLADVTGVDLYYVEKLAQSIVTDHAELMLNQGEIITESYWDSIAEEINERLQECSQIALTELAAQLNVGLDLIASILEPRLGTIVKGRLEGGQLYTPAYVARVSAMVRGAARGITVPTNLTVLWSSLQNLLQEMDGASGVAVDGSFFQSLFNGLVKGGEILGYPEGKPLVTTFVHPSMIEMLDAATEDALERGSWSDSLSLLPSSFTPQDASKMLSLCQSVQLALKDICDRMVKELETLAVSRSLGTAKPGDLPIANEVKAGYDSSRLSESSDMASDGGSNKHADKGPKKKKGKATGNTLANPSESGPDNQEHTSTKSKKGQRRGKDTSSQTSDSKPGSRKESLKMKEDNLSNPSEEWIMEKITALIPDFEEQGIDDPETILRPLANKVRPTIIGTWMEKKKALFKDNAERMKQLLDSLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLHDLDEHNKLKNGVDVQESPKSESISFGPGERAAISKSFPGALANKALAVVEALEGKSVETFMSAFRSVTEESGLPLKKLDKKLERTILHSYRKELTSQVSAETDPVSLLPKVVSLLYVQVYHKALQAPGRAISVAISHLQDKLDESACKTLADYQTATVTLLALLSAAPDDEDSCASDRVLSTRELLESKMPALKSLVLTTSQS*