Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020052.01.T01 | QGA84926.1 | 92.265 | 181 | 14 | 0 | 40 | 220 | 5 | 185 | 4.85E-99 | 301 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020052.01.T01 | P0CC52 | 85.083 | 181 | 27 | 0 | 40 | 220 | 246 | 426 | 2.89E-90 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020052.01.T01 | A0A481S124 | 97.093 | 172 | 5 | 0 | 40 | 211 | 264 | 435 | 8.22e-110 | 337 |
| MsG0480020052.01.T01 | K4KEH3 | 96.512 | 172 | 6 | 0 | 40 | 211 | 141 | 312 | 5.71e-111 | 336 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0480020052.01 | 0.815541 | 8.768380e-52 | 6.062582e-49 |
| MsG0080048560.01 | MsG0480020052.01 | 0.804572 | 2.025524e-49 | 1.047974e-46 |
| MsG0080048690.01 | MsG0480020052.01 | 0.811008 | 8.680295e-51 | 5.313117e-48 |
| MsG0080048692.01 | MsG0480020052.01 | 0.901741 | 1.971648e-78 | 2.701018e-74 |
| MsG0080048693.01 | MsG0480020052.01 | 0.871608 | 6.001169e-67 | 2.436070e-63 |
| MsG0080048694.01 | MsG0480020052.01 | 0.901617 | 2.234967e-78 | 3.044141e-74 |
| MsG0080048695.01 | MsG0480020052.01 | 0.900998 | 4.178457e-78 | 5.531899e-74 |
| MsG0080048697.01 | MsG0480020052.01 | 0.842355 | 2.719719e-58 | 4.113297e-55 |
| MsG0080048698.01 | MsG0480020052.01 | 0.847790 | 9.255690e-60 | 1.663557e-56 |
| MsG0080048699.01 | MsG0480020052.01 | 0.890912 | 6.413616e-74 | 5.501422e-70 |
| MsG0080048800.01 | MsG0480020052.01 | 0.804827 | 1.791898e-49 | 9.332856e-47 |
| MsG0080048848.01 | MsG0480020052.01 | -0.804602 | 1.997007e-49 | 1.034005e-46 |
| MsG0080049076.01 | MsG0480020052.01 | 0.888306 | 6.636656e-73 | 5.114934e-69 |
| MsG0180000337.01 | MsG0480020052.01 | -0.831399 | 1.706791e-55 | 1.849956e-52 |
| MsG0180001072.01 | MsG0480020052.01 | 0.806929 | 6.478662e-50 | 3.561072e-47 |
| MsG0180001507.01 | MsG0480020052.01 | 0.834495 | 2.899803e-56 | 3.447312e-53 |
| MsG0180001925.01 | MsG0480020052.01 | 0.864707 | 1.002071e-64 | 3.176176e-61 |
| MsG0180002099.01 | MsG0480020052.01 | 0.823677 | 1.217578e-53 | 1.055608e-50 |
| MsG0180002214.01 | MsG0480020052.01 | 0.836939 | 6.972068e-57 | 8.920086e-54 |
| MsG0180002439.01 | MsG0480020052.01 | 0.912764 | 1.340254e-83 | 3.063072e-79 |
| MsG0180002546.01 | MsG0480020052.01 | 0.827604 | 1.427127e-54 | 1.384286e-51 |
| MsG0180004124.01 | MsG0480020052.01 | 0.818313 | 2.091908e-52 | 1.560477e-49 |
| MsG0180004125.01 | MsG0480020052.01 | 0.814273 | 1.675646e-51 | 1.119332e-48 |
| MsG0180004300.01 | MsG0480020052.01 | -0.804418 | 2.181340e-49 | 1.124077e-46 |
| MsG0180004435.01 | MsG0480020052.01 | 0.804197 | 2.424543e-49 | 1.242349e-46 |
| MsG0180004586.01 | MsG0480020052.01 | 0.849268 | 3.605833e-60 | 6.798714e-57 |
| MsG0180004761.01 | MsG0480020052.01 | 0.907946 | 2.921450e-81 | 5.300883e-77 |
| MsG0180005791.01 | MsG0480020052.01 | 0.849986 | 2.273672e-60 | 4.388089e-57 |
| MsG0180006226.01 | MsG0480020052.01 | 0.844618 | 6.760982e-59 | 1.097695e-55 |
| MsG0280010695.01 | MsG0480020052.01 | 0.874965 | 4.470277e-68 | 2.052114e-64 |
| MsG0280011120.01 | MsG0480020052.01 | 0.818549 | 1.850014e-52 | 1.389066e-49 |
| MsG0380013448.01 | MsG0480020052.01 | 0.855998 | 4.329932e-62 | 1.018447e-58 |
| MsG0380013890.01 | MsG0480020052.01 | 0.875355 | 3.289704e-68 | 1.531005e-64 |
| MsG0380013892.01 | MsG0480020052.01 | 0.950202 | 2.676631e-108 | 5.614463e-103 |
| MsG0380013921.01 | MsG0480020052.01 | 0.816864 | 4.439431e-52 | 3.182621e-49 |
| MsG0380013923.01 | MsG0480020052.01 | 0.815816 | 7.615111e-52 | 5.304895e-49 |
| MsG0380013926.01 | MsG0480020052.01 | 0.821322 | 4.293432e-53 | 3.481717e-50 |
| MsG0380013928.01 | MsG0480020052.01 | 0.888052 | 8.308886e-73 | 6.334865e-69 |
| MsG0380013929.01 | MsG0480020052.01 | 0.841991 | 3.396573e-58 | 5.077767e-55 |
| MsG0380013931.01 | MsG0480020052.01 | 0.822869 | 1.880605e-53 | 1.593509e-50 |
| MsG0380013940.01 | MsG0480020052.01 | 0.915573 | 5.012084e-85 | 1.318890e-80 |
| MsG0380013941.01 | MsG0480020052.01 | 0.827868 | 1.233072e-54 | 1.205430e-51 |
| MsG0380013942.01 | MsG0480020052.01 | 0.878981 | 1.807596e-69 | 9.632553e-66 |
| MsG0380013943.01 | MsG0480020052.01 | 0.912249 | 2.418131e-83 | 5.391466e-79 |
| MsG0380013944.01 | MsG0480020052.01 | 0.813024 | 3.154722e-51 | 2.037103e-48 |
| MsG0380013945.01 | MsG0480020052.01 | 0.888349 | 6.387664e-73 | 4.931196e-69 |
| MsG0380013951.01 | MsG0480020052.01 | 0.879052 | 1.706848e-69 | 9.120054e-66 |
| MsG0380013952.01 | MsG0480020052.01 | 0.805476 | 1.310298e-49 | 6.938964e-47 |
| MsG0380013953.01 | MsG0480020052.01 | 0.906007 | 2.349426e-80 | 3.902283e-76 |
| MsG0380013954.01 | MsG0480020052.01 | 0.832169 | 1.102179e-55 | 1.222062e-52 |
| MsG0380013956.01 | MsG0480020052.01 | 0.848494 | 5.915641e-60 | 1.087682e-56 |
| MsG0380013957.01 | MsG0480020052.01 | 0.909609 | 4.715285e-82 | 9.254253e-78 |
| MsG0380013961.01 | MsG0480020052.01 | 0.828150 | 1.054977e-54 | 1.039894e-51 |
| MsG0380013962.01 | MsG0480020052.01 | 0.848826 | 4.783512e-60 | 8.890125e-57 |
| MsG0380013966.01 | MsG0480020052.01 | 0.887367 | 1.519005e-72 | 1.126437e-68 |
| MsG0380013967.01 | MsG0480020052.01 | 0.906963 | 8.457266e-81 | 1.467154e-76 |
| MsG0380013968.01 | MsG0480020052.01 | 0.882567 | 9.348848e-71 | 5.722212e-67 |
| MsG0380013971.01 | MsG0480020052.01 | 0.884145 | 2.461774e-71 | 1.605831e-67 |
| MsG0380013975.01 | MsG0480020052.01 | 0.873784 | 1.124610e-67 | 4.941000e-64 |
| MsG0380013977.01 | MsG0480020052.01 | 0.902154 | 1.295277e-78 | 1.809925e-74 |
| MsG0380013984.01 | MsG0480020052.01 | 0.823509 | 1.333386e-53 | 1.150404e-50 |
| MsG0380013985.01 | MsG0480020052.01 | 0.855642 | 5.500047e-62 | 1.278477e-58 |
| MsG0380013986.01 | MsG0480020052.01 | 0.913008 | 1.011572e-83 | 2.341885e-79 |
| MsG0380013997.01 | MsG0480020052.01 | 0.910785 | 1.269533e-82 | 2.636434e-78 |
| MsG0380013999.01 | MsG0480020052.01 | 0.822905 | 1.844116e-53 | 1.564196e-50 |
| MsG0380014005.01 | MsG0480020052.01 | 0.890217 | 1.203267e-73 | 1.002579e-69 |
| MsG0380014006.01 | MsG0480020052.01 | 0.912916 | 1.124651e-83 | 2.591144e-79 |
| MsG0380014016.01 | MsG0480020052.01 | 0.905274 | 5.105131e-80 | 8.192740e-76 |
| MsG0380014017.01 | MsG0480020052.01 | 0.829762 | 4.292357e-55 | 4.435588e-52 |
| MsG0380014018.01 | MsG0480020052.01 | 0.896211 | 4.584008e-76 | 4.911636e-72 |
| MsG0380014020.01 | MsG0480020052.01 | 0.833730 | 4.508847e-56 | 5.237906e-53 |
| MsG0380014021.01 | MsG0480020052.01 | 0.825203 | 5.328257e-54 | 4.824421e-51 |
| MsG0380014023.01 | MsG0480020052.01 | 0.877755 | 4.871441e-69 | 2.478513e-65 |
| MsG0380014024.01 | MsG0480020052.01 | 0.814811 | 1.273968e-51 | 8.634723e-49 |
| MsG0380014026.01 | MsG0480020052.01 | 0.860644 | 1.789176e-63 | 4.925495e-60 |
| MsG0380014029.01 | MsG0480020052.01 | 0.893121 | 8.437698e-75 | 7.936382e-71 |
| MsG0380014032.01 | MsG0480020052.01 | 0.882407 | 1.069129e-70 | 6.503839e-67 |
| MsG0380014033.01 | MsG0480020052.01 | 0.878121 | 3.627674e-69 | 1.871163e-65 |
| MsG0380014039.01 | MsG0480020052.01 | 0.824039 | 1.001770e-53 | 8.772437e-51 |
| MsG0380014051.01 | MsG0480020052.01 | 0.848069 | 7.750229e-60 | 1.405194e-56 |
| MsG0380014057.01 | MsG0480020052.01 | 0.808886 | 2.484224e-50 | 1.437130e-47 |
| MsG0380014129.01 | MsG0480020052.01 | 0.824082 | 9.786357e-54 | 8.580830e-51 |
| MsG0480018571.01 | MsG0480020052.01 | -0.811994 | 5.298566e-51 | 3.328637e-48 |
| MsG0480018788.01 | MsG0480020052.01 | 0.829317 | 5.507505e-55 | 5.617932e-52 |
| MsG0480019028.01 | MsG0480020052.01 | 0.892656 | 1.297500e-74 | 1.197156e-70 |
| MsG0480019038.01 | MsG0480020052.01 | -0.837495 | 5.026678e-57 | 6.541451e-54 |
| MsG0480020052.01 | MsG0480021327.01 | 0.809636 | 1.716028e-50 | 1.012915e-47 |
| MsG0480020052.01 | MsG0480021331.01 | 0.830116 | 3.520549e-55 | 3.674769e-52 |
| MsG0480020052.01 | MsG0480021476.01 | 0.826100 | 3.264018e-54 | 3.031764e-51 |
| MsG0480020052.01 | MsG0480022125.01 | -0.815262 | 1.011810e-51 | 6.942091e-49 |
| MsG0480020052.01 | MsG0480022591.01 | 0.824774 | 6.726010e-54 | 6.016221e-51 |
| MsG0480020052.01 | MsG0480023480.01 | 0.825236 | 5.232042e-54 | 4.741649e-51 |
| MsG0480020052.01 | MsG0580024442.01 | 0.800434 | 1.443832e-48 | 6.722350e-46 |
| MsG0480020052.01 | MsG0580024570.01 | 0.890900 | 6.485329e-74 | 5.559149e-70 |
| MsG0480020052.01 | MsG0580025572.01 | -0.810345 | 1.206975e-50 | 7.257535e-48 |
| MsG0480020052.01 | MsG0580027641.01 | -0.801019 | 1.096924e-48 | 5.183776e-46 |
| MsG0480020052.01 | MsG0580027677.01 | 0.898081 | 7.522490e-77 | 8.756092e-73 |
| MsG0480020052.01 | MsG0580029583.01 | -0.814816 | 1.270823e-51 | 8.614351e-49 |
| MsG0480020052.01 | MsG0580029792.01 | 0.815437 | 9.250896e-52 | 6.377889e-49 |
| MsG0480020052.01 | MsG0680030439.01 | 0.835992 | 1.214507e-56 | 1.510139e-53 |
| MsG0480020052.01 | MsG0680030961.01 | -0.800126 | 1.667922e-48 | 7.705143e-46 |
| MsG0480020052.01 | MsG0680031813.01 | 0.804234 | 2.382465e-49 | 1.221904e-46 |
| MsG0480020052.01 | MsG0680035741.01 | -0.827491 | 1.519657e-54 | 1.469346e-51 |
| MsG0480020052.01 | MsG0780038047.01 | 0.819437 | 1.162155e-52 | 8.942778e-50 |
| MsG0480020052.01 | MsG0780038197.01 | 0.868881 | 4.696548e-66 | 1.726692e-62 |
| MsG0480020052.01 | MsG0780039622.01 | 0.806110 | 9.642742e-50 | 5.190280e-47 |
| MsG0480020052.01 | MsG0780039838.01 | 0.831306 | 1.799055e-55 | 1.944589e-52 |
| MsG0480020052.01 | MsG0780039839.01 | 0.800787 | 1.223574e-48 | 5.747640e-46 |
| MsG0480020052.01 | MsG0780040440.01 | -0.800085 | 1.700341e-48 | 7.846700e-46 |
| MsG0480020052.01 | MsG0780041637.01 | 0.815485 | 9.026813e-52 | 6.231931e-49 |
| MsG0480020052.01 | MsG0880042291.01 | 0.886303 | 3.847704e-72 | 2.732965e-68 |
| MsG0480020052.01 | MsG0880043983.01 | -0.832013 | 1.204548e-55 | 1.329620e-52 |
| MsG0480020052.01 | MsG0880045054.01 | -0.808046 | 3.753678e-50 | 2.124174e-47 |
| MsG0480020052.01 | MsG0880045097.01 | 0.810729 | 9.970835e-51 | 6.057421e-48 |
| MsG0480020052.01 | MsG0880045273.01 | 0.857257 | 1.846579e-62 | 4.529646e-59 |
| MsG0480020052.01 | MsG0880045274.01 | 0.809652 | 1.701742e-50 | 1.004899e-47 |
| MsG0480020052.01 | MsG0880045369.01 | 0.801124 | 1.043921e-48 | 4.946246e-46 |
| MsG0480020052.01 | MsG0880045385.01 | 0.811160 | 8.046041e-51 | 4.943944e-48 |
| MsG0480020052.01 | MsG0880045630.01 | 0.880916 | 3.699885e-70 | 2.124251e-66 |
| MsG0480020052.01 | MsG0880046099.01 | 0.840437 | 8.701067e-58 | 1.239325e-54 |
| MsG0480020052.01 | MsG0880046219.01 | 0.802426 | 5.640864e-49 | 2.762480e-46 |
| MsG0480020052.01 | MsG0880046630.01 | 0.828182 | 1.036134e-54 | 1.022248e-51 |
| MsG0480020052.01 | MsG0880047531.01 | -0.812410 | 4.299761e-51 | 2.731970e-48 |
| MsG0380015348.01 | MsG0480020052.01 | 0.823873 | 1.095876e-53 | 9.552897e-51 |
| MsG0380016008.01 | MsG0480020052.01 | -0.808294 | 3.323552e-50 | 1.893201e-47 |
| MsG0380016018.01 | MsG0480020052.01 | -0.813327 | 2.707338e-51 | 1.762676e-48 |
| MsG0380017007.01 | MsG0480020052.01 | 0.857838 | 1.242815e-62 | 3.108778e-59 |
| MsG0380017405.01 | MsG0480020052.01 | 0.821152 | 4.699678e-53 | 3.793213e-50 |
| MsG0380017406.01 | MsG0480020052.01 | 0.815746 | 7.892021e-52 | 5.487766e-49 |
| MsG0380017935.01 | MsG0480020052.01 | 0.834413 | 3.041034e-56 | 3.606316e-53 |
| MsG0480018296.01 | MsG0480020052.01 | 0.868459 | 6.429442e-66 | 2.327367e-62 |
| MsG0280006475.01 | MsG0480020052.01 | 0.825297 | 5.061989e-54 | 4.595474e-51 |
| MsG0280007133.01 | MsG0480020052.01 | 0.819827 | 9.465617e-53 | 7.363729e-50 |
| MsG0280007896.01 | MsG0480020052.01 | -0.820032 | 8.495669e-53 | 6.647472e-50 |
| MsG0280008820.01 | MsG0480020052.01 | 0.857074 | 2.090329e-62 | 5.096357e-59 |
| MsG0280009541.01 | MsG0480020052.01 | 0.812185 | 4.815136e-51 | 3.040734e-48 |
| MsG0280009971.01 | MsG0480020052.01 | -0.849483 | 3.141132e-60 | 5.963266e-57 |
| MsG0280010142.01 | MsG0480020052.01 | 0.884549 | 1.744052e-71 | 1.155518e-67 |
| MsG0280010143.01 | MsG0480020052.01 | 0.806432 | 8.251661e-50 | 4.477992e-47 |
| MsG0280010145.01 | MsG0480020052.01 | 0.890259 | 1.157687e-73 | 9.662709e-70 |
| MsG0280010227.01 | MsG0480020052.01 | 0.841747 | 3.939763e-58 | 5.844424e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020052.01.T01 | MTR_0002s0310 | 82.673 | 202 | 33 | 1 | 19 | 220 | 148 | 347 | 5.62e-83 | 256 |
| MsG0480020052.01.T01 | MTR_3g035660 | 93.370 | 181 | 12 | 0 | 40 | 220 | 625 | 805 | 2.46e-81 | 263 |
| MsG0480020052.01.T01 | MTR_3g035660 | 60.606 | 66 | 23 | 1 | 1 | 66 | 275 | 337 | 7.14e-15 | 75.5 |
| MsG0480020052.01.T01 | MTR_4g451295 | 81.513 | 119 | 14 | 2 | 181 | 299 | 192 | 302 | 4.98e-61 | 196 |
| MsG0480020052.01.T01 | MTR_5g080940 | 80.702 | 114 | 15 | 1 | 185 | 298 | 265 | 371 | 4.32e-55 | 185 |
| MsG0480020052.01.T01 | MTR_4g006070 | 63.478 | 115 | 33 | 2 | 185 | 298 | 192 | 298 | 7.85e-38 | 138 |
| MsG0480020052.01.T01 | MTR_1g039020 | 98.000 | 50 | 1 | 0 | 250 | 299 | 13 | 62 | 5.95e-33 | 116 |
| MsG0480020052.01.T01 | MTR_4g076920 | 91.667 | 48 | 4 | 0 | 237 | 284 | 132 | 179 | 6.59e-24 | 97.4 |
| MsG0480020052.01.T01 | MTR_0002s0300 | 89.744 | 39 | 4 | 0 | 1 | 39 | 93 | 131 | 3.05e-16 | 74.3 |
| MsG0480020052.01.T01 | MTR_4g103280 | 75.556 | 45 | 9 | 1 | 1 | 43 | 72 | 116 | 8.70e-13 | 65.5 |
| MsG0480020052.01.T01 | MTR_4g122520 | 92.857 | 28 | 2 | 0 | 271 | 298 | 25 | 52 | 1.69e-12 | 61.6 |
| MsG0480020052.01.T01 | MTR_4g091430 | 58.929 | 56 | 23 | 0 | 211 | 266 | 46 | 101 | 5.75e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020052.01.T01 | ATCG01250 | 91.713 | 181 | 15 | 0 | 40 | 220 | 141 | 321 | 2.16e-85 | 261 |
| MsG0480020052.01.T01 | ATCG00890 | 91.713 | 181 | 15 | 0 | 40 | 220 | 141 | 321 | 2.16e-85 | 261 |
| MsG0480020052.01.T01 | AT2G07689 | 34.884 | 172 | 108 | 3 | 40 | 211 | 14 | 181 | 7.11e-20 | 86.3 |
| MsG0480020052.01.T01 | ATCG01240 | 97.436 | 39 | 1 | 0 | 1 | 39 | 116 | 154 | 7.39e-19 | 82.0 |
| MsG0480020052.01.T01 | ATCG00900 | 97.436 | 39 | 1 | 0 | 1 | 39 | 116 | 154 | 7.39e-19 | 82.0 |
Find 82 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGGATATGTAATTAT+TGG | 0.189063 | 4:-32895203 | MsG0480020052.01.T01:CDS |
| GCTATTCTTAGCATGCTATT+AGG | 0.213688 | 4:-32895287 | MsG0480020052.01.T01:CDS |
| TTTGCTTGCATTGTGTTATT+TGG | 0.223841 | 4:-32895098 | MsG0480020052.01.T01:CDS |
| TCGGAAAACTTCATTTATTC+TGG | 0.226485 | 4:-32894950 | MsG0480020052.01.T01:CDS |
| TCGTTTGATGAGAAATAAAA+AGG | 0.282633 | 4:+32895335 | None:intergenic |
| CTATTCTTAGCATGCTATTA+GGG | 0.301257 | 4:-32895286 | MsG0480020052.01.T01:CDS |
| TATTCGTCCATAGGTCAAAT+TGG | 0.303171 | 4:-32895218 | MsG0480020052.01.T01:CDS |
| GTGTTATTTGGTCTACATAC+TGG | 0.304191 | 4:-32895086 | MsG0480020052.01.T01:CDS |
| GCACGAAAGGCGTAACGATC+TGG | 0.311741 | 4:+32894752 | None:intergenic |
| GCAAGCAGGTCTATATTTCT+TGG | 0.315741 | 4:-32894919 | MsG0480020052.01.T01:intron |
| GCATACGTTTCATGCTTGTT+TGG | 0.326865 | 4:+32895246 | None:intergenic |
| CAAATTAAGTTCCGAATTAG+TGG | 0.342047 | 4:-32896178 | MsG0480020052.01.T01:CDS |
| CACCAACTTCCTTAACCTTC+CGG | 0.362818 | 4:-32894627 | MsG0480020052.01.T01:CDS |
| TGGCGATGCCATACGCAAAA+AGG | 0.366109 | 4:-32896139 | MsG0480020052.01.T01:CDS |
| CATACGTTTCATGCTTGTTT+GGG | 0.369828 | 4:+32895247 | None:intergenic |
| GTAATTATTGGAATAATTGT+TGG | 0.373428 | 4:-32895191 | MsG0480020052.01.T01:CDS |
| CAAAGTCGTAAGACCATGTA+TGG | 0.380055 | 4:+32894584 | None:intergenic |
| TTCACCGGGGCTTCGGTCGC+CGG | 0.380408 | 4:-32894667 | MsG0480020052.01.T01:CDS |
| TTTGGCAGCATCCACTAATT+CGG | 0.404543 | 4:+32896167 | None:intergenic |
| TGCCCAGTGCCGGAAGGTTA+AGG | 0.409134 | 4:+32894618 | None:intergenic |
| TACATATCCAATTTGACCTA+TGG | 0.420081 | 4:+32895211 | None:intergenic |
| CTTCCTTAACCTTCCGGCAC+TGG | 0.422146 | 4:-32894621 | MsG0480020052.01.T01:CDS |
| GCCACCGTTCACCGGGGCTT+CGG | 0.422211 | 4:-32894674 | MsG0480020052.01.T01:CDS |
| TTCTGGTGTGGATGGCAAGC+AGG | 0.433380 | 4:-32894933 | MsG0480020052.01.T01:CDS |
| GGCTGACGCCTGCCCAGTGC+CGG | 0.435469 | 4:+32894608 | None:intergenic |
| TATGGCATCGCCATTCCCTT+TGG | 0.436234 | 4:+32896149 | None:intergenic |
| TTAACCTTCCGGCACTGGGC+AGG | 0.436659 | 4:-32894616 | MsG0480020052.01.T01:CDS |
| GCCCTATGTCTATTATCCTT+AGG | 0.440840 | 4:-32894999 | MsG0480020052.01.T01:CDS |
| GGAGGTCTTCCTCCACTAGC+AGG | 0.443104 | 4:-32894978 | MsG0480020052.01.T01:CDS |
| AGCAAAAGTTCCTAGATTCA+TGG | 0.448640 | 4:+32895115 | None:intergenic |
| TCGCCGGCTTCCCTGTCATC+AGG | 0.453580 | 4:-32894651 | MsG0480020052.01.T01:CDS |
| TTCTATATCTCCATGAATCT+AGG | 0.460861 | 4:-32895125 | MsG0480020052.01.T01:CDS |
| GAAGCCGGCGACCGAAGCCC+CGG | 0.461073 | 4:+32894663 | None:intergenic |
| TTCATTTATTCTGGTGTGGA+TGG | 0.469314 | 4:-32894941 | MsG0480020052.01.T01:CDS |
| ACAAGGAATTTCACTACCTT+AGG | 0.472790 | 4:-32894712 | MsG0480020052.01.T01:CDS |
| TACATGGTCTTACGACTTTG+CGG | 0.476001 | 4:-32894581 | MsG0480020052.01.T01:CDS |
| AGGTAGTGAAATTCCTTGTC+GGG | 0.478507 | 4:+32894716 | None:intergenic |
| TGCCGGAAGGTTAAGGAAGT+TGG | 0.485164 | 4:+32894625 | None:intergenic |
| TAGTTACGGCCACCGTTCAC+CGG | 0.488141 | 4:-32894682 | MsG0480020052.01.T01:CDS |
| CACGAAAGGCGTAACGATCT+GGG | 0.491297 | 4:+32894753 | None:intergenic |
| CCTTAGGACCGTTATAGTTA+CGG | 0.491944 | 4:-32894696 | MsG0480020052.01.T01:CDS |
| GAAGTTGGTGACCTGATGAC+AGG | 0.495416 | 4:+32894640 | None:intergenic |
| AAGGTAGTGAAATTCCTTGT+CGG | 0.504043 | 4:+32894715 | None:intergenic |
| TTCCTTAACCTTCCGGCACT+GGG | 0.504342 | 4:-32894620 | MsG0480020052.01.T01:CDS |
| CACTGTCTCGGAGAGAGGCT+CGG | 0.506062 | 4:+32894776 | None:intergenic |
| TAACGATCTGGGCACTGTCT+CGG | 0.513539 | 4:+32894764 | None:intergenic |
| GATCGTTACGCCTTTCGTGC+GGG | 0.516913 | 4:-32894749 | MsG0480020052.01.T01:CDS |
| ATGCTTGCTTATTCGTCCAT+AGG | 0.517225 | 4:-32895227 | MsG0480020052.01.T01:CDS |
| TGACCTGATGACAGGGAAGC+CGG | 0.518242 | 4:+32894648 | None:intergenic |
| AAACTTCATTTATTCTGGTG+TGG | 0.518432 | 4:-32894945 | MsG0480020052.01.T01:CDS |
| TTTATTTCTCATCAAACGAA+TGG | 0.522523 | 4:-32895331 | MsG0480020052.01.T01:CDS |
| AGTTACGGCCACCGTTCACC+GGG | 0.524007 | 4:-32894681 | MsG0480020052.01.T01:CDS |
| GATAACATTCGAGATTATGC+AGG | 0.531827 | 4:-32895059 | MsG0480020052.01.T01:CDS |
| GTGGATGCTGCCAAAGGGAA+TGG | 0.532446 | 4:-32896159 | MsG0480020052.01.T01:CDS |
| GCGACCGAAGCCCCGGTGAA+CGG | 0.541205 | 4:+32894670 | None:intergenic |
| CTGGGCACTGTCTCGGAGAG+AGG | 0.542198 | 4:+32894771 | None:intergenic |
| ATAATTGTTGGAGACTCAAA+TGG | 0.548093 | 4:-32895179 | MsG0480020052.01.T01:CDS |
| AAAGGAAGAGACTCATAGAA+TGG | 0.548096 | 4:-32896121 | MsG0480020052.01.T01:CDS |
| TCCTAAGGATAATAGACATA+GGG | 0.556597 | 4:+32894998 | None:intergenic |
| AAAGTCGTAAGACCATGTAT+GGG | 0.556989 | 4:+32894585 | None:intergenic |
| CTCCTAAGGATAATAGACAT+AGG | 0.558738 | 4:+32894997 | None:intergenic |
| AGATCGTTACGCCTTTCGTG+CGG | 0.565799 | 4:-32894750 | MsG0480020052.01.T01:CDS |
| GACGCCTGCCCAGTGCCGGA+AGG | 0.568365 | 4:+32894612 | None:intergenic |
| AACGGTGGCCGTAACTATAA+CGG | 0.574927 | 4:+32894688 | None:intergenic |
| AATTAGTGGATGCTGCCAAA+GGG | 0.575951 | 4:-32896164 | MsG0480020052.01.T01:CDS |
| ATAGCATGCTAAGAATAGCT+AGG | 0.576533 | 4:+32895291 | None:intergenic |
| TAGTGGAGGAAGACCTCCTA+AGG | 0.577052 | 4:+32894983 | None:intergenic |
| CCGTAACTATAACGGTCCTA+AGG | 0.580418 | 4:+32894696 | None:intergenic |
| TAAGTTCCGACCCGCACGAA+AGG | 0.581321 | 4:+32894739 | None:intergenic |
| GAATTAGTGGATGCTGCCAA+AGG | 0.584526 | 4:-32896165 | MsG0480020052.01.T01:CDS |
| ACCGAAGCCCCGGTGAACGG+TGG | 0.584737 | 4:+32894673 | None:intergenic |
| CTATGTCTATTATCCTTAGG+AGG | 0.590927 | 4:-32894996 | MsG0480020052.01.T01:CDS |
| AGAGACTCATAGAATGGCAG+AGG | 0.593635 | 4:-32896115 | MsG0480020052.01.T01:CDS |
| GTTACGCCTTTCGTGCGGGT+CGG | 0.605304 | 4:-32894745 | MsG0480020052.01.T01:CDS |
| AAGTCGTAAGACCATGTATG+GGG | 0.621859 | 4:+32894586 | None:intergenic |
| ATTGTTGGAGACTCAAATGG+TGG | 0.626325 | 4:-32895176 | MsG0480020052.01.T01:CDS |
| AAGTTGGTGACCTGATGACA+GGG | 0.627282 | 4:+32894641 | None:intergenic |
| TAGACATGTCTGTGAAGATG+CGG | 0.645281 | 4:+32894804 | None:intergenic |
| AGGAATATCGAAAATTCGAG+TGG | 0.650147 | 4:+32895355 | None:intergenic |
| GGGTCGGAACTTACCCGACA+AGG | 0.655880 | 4:-32894729 | MsG0480020052.01.T01:CDS |
| AGTCGTAAGACCATGTATGG+GGG | 0.686647 | 4:+32894587 | None:intergenic |
| GTTACGGCCACCGTTCACCG+GGG | 0.757630 | 4:-32894680 | MsG0480020052.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAAGAGGAATATT+TGG | - | Chr4:32894854-32894873 | MsG0480020052.01.T01:intron | 15.0% |
| !! | AGAATCAATAGAAAAAGAAT+CGG | - | Chr4:32894751-32894770 | MsG0480020052.01.T01:CDS | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | - | Chr4:32895545-32895564 | MsG0480020052.01.T01:intron | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | - | Chr4:32895557-32895576 | MsG0480020052.01.T01:intron | 20.0% |
| !! | TTGCTTAAGAATAAATAAAG+AGG | - | Chr4:32894845-32894864 | MsG0480020052.01.T01:intron | 20.0% |
| ! | AAGTTTAGTAATGAGCATAA+CGG | - | Chr4:32895108-32895127 | MsG0480020052.01.T01:CDS | 25.0% |
| ! | AGGAATATTTGGTATTTGTT+TGG | - | Chr4:32894865-32894884 | MsG0480020052.01.T01:intron | 25.0% |
| ! | CTATATTTCTTGGTTTCAAT+AGG | - | Chr4:32895839-32895858 | MsG0480020052.01.T01:intron | 25.0% |
| ! | GAAGAATTAGACCAAAAATT+AGG | + | Chr4:32895024-32895043 | None:intergenic | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | + | Chr4:32895416-32895435 | None:intergenic | 25.0% |
| !! | GATTCTTTTCCAATTATGTA+TGG | + | Chr4:32894737-32894756 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | - | Chr4:32895417-32895436 | MsG0480020052.01.T01:intron | 25.0% |
| !!! | ATACACAAAAGATCCTTTTT+TGG | - | Chr4:32895715-32895734 | MsG0480020052.01.T01:intron | 25.0% |
| AAACTTCATTTATTCTGGTG+TGG | - | Chr4:32895803-32895822 | MsG0480020052.01.T01:intron | 30.0% | |
| ACATAGACCTATGTTATGTA+TGG | - | Chr4:32894709-32894728 | MsG0480020052.01.T01:CDS | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | - | Chr4:32895569-32895588 | MsG0480020052.01.T01:intron | 30.0% | |
| ATCGAAAAGAAGCAAATGAA+AGG | + | Chr4:32894975-32894994 | None:intergenic | 30.0% | |
| ATTTCCCGAAAAACTAATCA+TGG | + | Chr4:32895161-32895180 | None:intergenic | 30.0% | |
| CAAATTAAGTTCCGAATTAG+TGG | - | Chr4:32894570-32894589 | MsG0480020052.01.T01:CDS | 30.0% | |
| CTATTCTTAGCATGCTATTA+GGG | - | Chr4:32895462-32895481 | MsG0480020052.01.T01:intron | 30.0% | |
| CTGATCAAAAAGATCTATCT+TGG | - | Chr4:32895065-32895084 | MsG0480020052.01.T01:CDS | 30.0% | |
| GAAAGACGAAATAGAAATGA+TGG | - | Chr4:32894799-32894818 | MsG0480020052.01.T01:CDS | 30.0% | |
| GTACATTGAATGTACAGAAA+TGG | - | Chr4:32895261-32895280 | MsG0480020052.01.T01:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | + | Chr4:32895540-32895559 | None:intergenic | 30.0% | |
| TATGGATCCATACATAACAT+AGG | + | Chr4:32894719-32894738 | None:intergenic | 30.0% | |
| TCCTAAGGATAATAGACATA+GGG | + | Chr4:32895753-32895772 | None:intergenic | 30.0% | |
| TCGGAAAACTTCATTTATTC+TGG | - | Chr4:32895798-32895817 | MsG0480020052.01.T01:intron | 30.0% | |
| TGTACATTCAATGTACTCTA+CGG | + | Chr4:32895257-32895276 | None:intergenic | 30.0% | |
| TGTATGGATCCATACATAAT+TGG | - | Chr4:32894725-32894744 | MsG0480020052.01.T01:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | - | Chr4:32895623-32895642 | MsG0480020052.01.T01:intron | 30.0% | |
| TTTCCCGAAAAACTAATCAT+GGG | + | Chr4:32895160-32895179 | None:intergenic | 30.0% | |
| TTTCGTTGAAATTGTTCGTT+TGG | + | Chr4:32895186-32895205 | None:intergenic | 30.0% | |
| ! | AGATAGATCTTTTTGATCAG+AGG | + | Chr4:32895065-32895084 | None:intergenic | 30.0% |
| ! | CAGGAATTGATCCTAATTTT+TGG | - | Chr4:32895010-32895029 | MsG0480020052.01.T01:CDS | 30.0% |
| ! | TTTCATTTGCTTCTTTTCGA+TGG | - | Chr4:32894974-32894993 | MsG0480020052.01.T01:CDS | 30.0% |
| ! | TTTGCTTGCATTGTGTTATT+TGG | - | Chr4:32895650-32895669 | MsG0480020052.01.T01:intron | 30.0% |
| !!! | AGAACCCATGATTAGTTTTT+CGG | - | Chr4:32895153-32895172 | MsG0480020052.01.T01:CDS | 30.0% |
| !!! | CGATGGAAGTTTTATTTTTC+AGG | - | Chr4:32894991-32895010 | MsG0480020052.01.T01:CDS | 30.0% |
| AAAGGAAGAGACTCATAGAA+TGG | - | Chr4:32894627-32894646 | MsG0480020052.01.T01:CDS | 35.0% | |
| AAAGTCGTAAGACCATGTAT+GGG | + | Chr4:32896166-32896185 | None:intergenic | 35.0% | |
| AAGGTAGTGAAATTCCTTGT+CGG | + | Chr4:32896036-32896055 | None:intergenic | 35.0% | |
| ACAAGGAATTTCACTACCTT+AGG | - | Chr4:32896036-32896055 | MsG0480020052.01.T01:intron | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | + | Chr4:32895636-32895655 | None:intergenic | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | + | Chr4:32895396-32895415 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | + | Chr4:32895460-32895479 | None:intergenic | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | + | Chr4:32895504-32895523 | None:intergenic | 35.0% | |
| CTATGTCTATTATCCTTAGG+AGG | - | Chr4:32895752-32895771 | MsG0480020052.01.T01:intron | 35.0% | |
| CTCCTAAGGATAATAGACAT+AGG | + | Chr4:32895754-32895773 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | - | Chr4:32895689-32895708 | MsG0480020052.01.T01:intron | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | - | Chr4:32895461-32895480 | MsG0480020052.01.T01:intron | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | - | Chr4:32895530-32895549 | MsG0480020052.01.T01:intron | 35.0% | |
| TTCATTTATTCTGGTGTGGA+TGG | - | Chr4:32895807-32895826 | MsG0480020052.01.T01:intron | 35.0% | |
| ! | ATTTTCGTTAATCCATGAGC+AGG | - | Chr4:32894674-32894693 | MsG0480020052.01.T01:CDS | 35.0% |
| !! | GTGTTATTTGGTCTACATAC+TGG | - | Chr4:32895662-32895681 | MsG0480020052.01.T01:intron | 35.0% |
| !!! | GAACCCATGATTAGTTTTTC+GGG | - | Chr4:32895154-32895173 | MsG0480020052.01.T01:CDS | 35.0% |
| AAGTCGTAAGACCATGTATG+GGG | + | Chr4:32896165-32896184 | None:intergenic | 40.0% | |
| ACAGAAAGAAAAGCAACGAC+TGG | + | Chr4:32895344-32895363 | None:intergenic | 40.0% | |
| AGGTAGTGAAATTCCTTGTC+GGG | + | Chr4:32896035-32896054 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | - | Chr4:32895521-32895540 | MsG0480020052.01.T01:intron | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | - | Chr4:32895572-32895591 | MsG0480020052.01.T01:intron | 40.0% | |
| CAAAGTCGTAAGACCATGTA+TGG | + | Chr4:32896167-32896186 | None:intergenic | 40.0% | |
| CCTTAGGACCGTTATAGTTA+CGG | - | Chr4:32896052-32896071 | MsG0480020052.01.T01:intron | 40.0% | |
| GCAAGCAGGTCTATATTTCT+TGG | - | Chr4:32895829-32895848 | MsG0480020052.01.T01:intron | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | + | Chr4:32895505-32895524 | None:intergenic | 40.0% | |
| GCCCTATGTCTATTATCCTT+AGG | - | Chr4:32895749-32895768 | MsG0480020052.01.T01:intron | 40.0% | |
| GCTAAAGAGAGAGCCAAAAA+AGG | + | Chr4:32895731-32895750 | None:intergenic | 40.0% | |
| GTGTATATAGATCCTGCTCA+TGG | + | Chr4:32894689-32894708 | None:intergenic | 40.0% | |
| TAGACATGTCTGTGAAGATG+CGG | + | Chr4:32895947-32895966 | None:intergenic | 40.0% | |
| TCAATGTACTCTACGGATAG+AGG | + | Chr4:32895250-32895269 | None:intergenic | 40.0% | |
| TTCAATAGGACTTAAGCCCA+GGG | - | Chr4:32895853-32895872 | MsG0480020052.01.T01:intron | 40.0% | |
| TTTCAATAGGACTTAAGCCC+AGG | - | Chr4:32895852-32895871 | MsG0480020052.01.T01:intron | 40.0% | |
| TTTCCGAAAAAACCTGCTAG+TGG | + | Chr4:32895785-32895804 | None:intergenic | 40.0% | |
| TTTGGCAGCATCCACTAATT+CGG | + | Chr4:32894584-32894603 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATGCTGCCAAA+GGG | - | Chr4:32894584-32894603 | MsG0480020052.01.T01:CDS | 40.0% |
| ! | AGTCTCTTCCTTTTTGCGTA+TGG | + | Chr4:32894620-32894639 | None:intergenic | 40.0% |
| ! | ATGGCTCAACTAAGCACTTT+TGG | - | Chr4:32894818-32894837 | MsG0480020052.01.T01:CDS | 40.0% |
| ! | TACATGGTCTTACGACTTTG+CGG | - | Chr4:32896167-32896186 | MsG0480020052.01.T01:CDS | 40.0% |
| ! | TGGCTCAACTAAGCACTTTT+GGG | - | Chr4:32894819-32894838 | MsG0480020052.01.T01:intron | 40.0% |
| AACGGTGGCCGTAACTATAA+CGG | + | Chr4:32896063-32896082 | None:intergenic | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | + | Chr4:32895338-32895357 | None:intergenic | 45.0% | |
| AGAGACTCATAGAATGGCAG+AGG | - | Chr4:32894633-32894652 | MsG0480020052.01.T01:CDS | 45.0% | |
| AGGGAACAGTGAAGCTTCAT+AGG | - | Chr4:32895896-32895915 | MsG0480020052.01.T01:intron | 45.0% | |
| AGTCGTAAGACCATGTATGG+GGG | + | Chr4:32896164-32896183 | None:intergenic | 45.0% | |
| ATGAAGCTTCACTGTTCCCT+GGG | + | Chr4:32895896-32895915 | None:intergenic | 45.0% | |
| CACCAACTTCCTTAACCTTC+CGG | - | Chr4:32896121-32896140 | MsG0480020052.01.T01:CDS | 45.0% | |
| CCGTAACTATAACGGTCCTA+AGG | + | Chr4:32896055-32896074 | None:intergenic | 45.0% | |
| GGAGAGTCAGAGTCAAAAAG+AGG | + | Chr4:32895317-32895336 | None:intergenic | 45.0% | |
| GGGAACAGTGAAGCTTCATA+GGG | - | Chr4:32895897-32895916 | MsG0480020052.01.T01:intron | 45.0% | |
| TATGAAGCTTCACTGTTCCC+TGG | + | Chr4:32895897-32895916 | None:intergenic | 45.0% | |
| TCATGGGTTCTTCTCTCCAT+CGG | + | Chr4:32895144-32895163 | None:intergenic | 45.0% | |
| TTCATAGGGTCTTTCTGTCC+AGG | - | Chr4:32895911-32895930 | MsG0480020052.01.T01:intron | 45.0% | |
| ! | GAATTAGTGGATGCTGCCAA+AGG | - | Chr4:32894583-32894602 | MsG0480020052.01.T01:CDS | 45.0% |
| ! | GGCTCAACTAAGCACTTTTG+GGG | - | Chr4:32894820-32894839 | MsG0480020052.01.T01:intron | 45.0% |
| ! | TTTGCGGAGACCTGTGTTTT+TGG | - | Chr4:32896183-32896202 | MsG0480020052.01.T01:CDS | 45.0% |
| !! | AAGTTGGTGACCTGATGACA+GGG | + | Chr4:32896110-32896129 | None:intergenic | 45.0% |
| !!! | CCTCCACTAGCAGGTTTTTT+CGG | - | Chr4:32895779-32895798 | MsG0480020052.01.T01:intron | 45.0% |
| AGATCGTTACGCCTTTCGTG+CGG | - | Chr4:32895998-32896017 | MsG0480020052.01.T01:intron | 50.0% | |
| CCGAAAAAACCTGCTAGTGG+AGG | + | Chr4:32895782-32895801 | None:intergenic | 50.0% | |
| TAGTGGAGGAAGACCTCCTA+AGG | + | Chr4:32895768-32895787 | None:intergenic | 50.0% | |
| TATGGCATCGCCATTCCCTT+TGG | + | Chr4:32894602-32894621 | None:intergenic | 50.0% | |
| TGCCGGAAGGTTAAGGAAGT+TGG | + | Chr4:32896126-32896145 | None:intergenic | 50.0% | |
| TGGCGATGCCATACGCAAAA+AGG | - | Chr4:32894609-32894628 | MsG0480020052.01.T01:CDS | 50.0% | |
| TTCCTTAACCTTCCGGCACT+GGG | - | Chr4:32896128-32896147 | MsG0480020052.01.T01:CDS | 50.0% | |
| ! | CACGAAAGGCGTAACGATCT+GGG | + | Chr4:32895998-32896017 | None:intergenic | 50.0% |
| ! | TAACGATCTGGGCACTGTCT+CGG | + | Chr4:32895987-32896006 | None:intergenic | 50.0% |
| !! | GAAGTTGGTGACCTGATGAC+AGG | + | Chr4:32896111-32896130 | None:intergenic | 50.0% |
| !! | TGTTCCCTGGGATTGGCTTT+GGG | + | Chr4:32895884-32895903 | None:intergenic | 50.0% |
| AACAGCCCAAAGCCAATCCC+AGG | - | Chr4:32895876-32895895 | MsG0480020052.01.T01:intron | 55.0% | |
| ACAGCCCAAAGCCAATCCCA+GGG | - | Chr4:32895877-32895896 | MsG0480020052.01.T01:intron | 55.0% | |
| CTTCCTTAACCTTCCGGCAC+TGG | - | Chr4:32896127-32896146 | MsG0480020052.01.T01:CDS | 55.0% | |
| GATCGTTACGCCTTTCGTGC+GGG | - | Chr4:32895999-32896018 | MsG0480020052.01.T01:intron | 55.0% | |
| GCTTCACTGTTCCCTGGGAT+TGG | + | Chr4:32895891-32895910 | None:intergenic | 55.0% | |
| GTGGATGCTGCCAAAGGGAA+TGG | - | Chr4:32894589-32894608 | MsG0480020052.01.T01:CDS | 55.0% | |
| TAACGGCGCTGTTGTTCCGA+TGG | - | Chr4:32895125-32895144 | MsG0480020052.01.T01:CDS | 55.0% | |
| TAAGTTCCGACCCGCACGAA+AGG | + | Chr4:32896012-32896031 | None:intergenic | 55.0% | |
| TAGTTACGGCCACCGTTCAC+CGG | - | Chr4:32896066-32896085 | MsG0480020052.01.T01:intron | 55.0% | |
| TGACCTGATGACAGGGAAGC+CGG | + | Chr4:32896103-32896122 | None:intergenic | 55.0% | |
| TTCTGGTGTGGATGGCAAGC+AGG | - | Chr4:32895815-32895834 | MsG0480020052.01.T01:intron | 55.0% | |
| ! | GCACGAAAGGCGTAACGATC+TGG | + | Chr4:32895999-32896018 | None:intergenic | 55.0% |
| !! | ATTGGCTTTGGGCTGTTCCC+TGG | + | Chr4:32895873-32895892 | None:intergenic | 55.0% |
| !! | CTGTTCCCTGGGATTGGCTT+TGG | + | Chr4:32895885-32895904 | None:intergenic | 55.0% |
| !! | TTGGCTTTGGGCTGTTCCCT+GGG | + | Chr4:32895872-32895891 | None:intergenic | 55.0% |
| AGTTACGGCCACCGTTCACC+GGG | - | Chr4:32896067-32896086 | MsG0480020052.01.T01:intron | 60.0% | |
| CACTGTCTCGGAGAGAGGCT+CGG | + | Chr4:32895975-32895994 | None:intergenic | 60.0% | |
| GGAGGTCTTCCTCCACTAGC+AGG | - | Chr4:32895770-32895789 | MsG0480020052.01.T01:intron | 60.0% | |
| GGGTCGGAACTTACCCGACA+AGG | - | Chr4:32896019-32896038 | MsG0480020052.01.T01:intron | 60.0% | |
| GGGTCTTTCTGTCCAGGTGC+AGG | - | Chr4:32895917-32895936 | MsG0480020052.01.T01:intron | 60.0% | |
| GTTACGCCTTTCGTGCGGGT+CGG | - | Chr4:32896003-32896022 | MsG0480020052.01.T01:intron | 60.0% | |
| ! | AGATGCGGACTACCTGCACC+TGG | + | Chr4:32895932-32895951 | None:intergenic | 60.0% |
| ! | TGCCCAGTGCCGGAAGGTTA+AGG | + | Chr4:32896133-32896152 | None:intergenic | 60.0% |
| ! | TTAACCTTCCGGCACTGGGC+AGG | - | Chr4:32896132-32896151 | MsG0480020052.01.T01:CDS | 60.0% |
| CAGGCGTCAGCCCCCATACA+TGG | - | Chr4:32896151-32896170 | MsG0480020052.01.T01:CDS | 65.0% | |
| GTTACGGCCACCGTTCACCG+GGG | - | Chr4:32896068-32896087 | MsG0480020052.01.T01:intron | 65.0% | |
| ! | CTGGGCACTGTCTCGGAGAG+AGG | + | Chr4:32895980-32895999 | None:intergenic | 65.0% |
| !! | TCGCCGGCTTCCCTGTCATC+AGG | - | Chr4:32896097-32896116 | MsG0480020052.01.T01:CDS | 65.0% |
| ACCGAAGCCCCGGTGAACGG+TGG | + | Chr4:32896078-32896097 | None:intergenic | 70.0% | |
| GCCACCGTTCACCGGGGCTT+CGG | - | Chr4:32896074-32896093 | MsG0480020052.01.T01:intron | 70.0% | |
| GCGACCGAAGCCCCGGTGAA+CGG | + | Chr4:32896081-32896100 | None:intergenic | 70.0% | |
| TTCACCGGGGCTTCGGTCGC+CGG | - | Chr4:32896081-32896100 | MsG0480020052.01.T01:intron | 70.0% | |
| GAAGCCGGCGACCGAAGCCC+CGG | + | Chr4:32896088-32896107 | None:intergenic | 75.0% | |
| GGCTGACGCCTGCCCAGTGC+CGG | + | Chr4:32896143-32896162 | None:intergenic | 75.0% | |
| ! | GACGCCTGCCCAGTGCCGGA+AGG | + | Chr4:32896139-32896158 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 32894562 | 32896208 | 32894562 | ID=MsG0480020052.01;Name=MsG0480020052.01 |
| Chr4 | mRNA | 32894562 | 32896208 | 32894562 | ID=MsG0480020052.01.T01;Parent=MsG0480020052.01;Name=MsG0480020052.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|0|0|3|0|299 |
| Chr4 | exon | 32896091 | 32896208 | 32896091 | ID=MsG0480020052.01.T01:exon:6017;Parent=MsG0480020052.01.T01 |
| Chr4 | exon | 32894920 | 32895425 | 32894920 | ID=MsG0480020052.01.T01:exon:6016;Parent=MsG0480020052.01.T01 |
| Chr4 | exon | 32894562 | 32894837 | 32894562 | ID=MsG0480020052.01.T01:exon:6015;Parent=MsG0480020052.01.T01 |
| Chr4 | CDS | 32896091 | 32896208 | 32896091 | ID=MsG0480020052.01.T01:cds;Parent=MsG0480020052.01.T01 |
| Chr4 | CDS | 32894920 | 32895425 | 32894920 | ID=MsG0480020052.01.T01:cds;Parent=MsG0480020052.01.T01 |
| Chr4 | CDS | 32894562 | 32894837 | 32894562 | ID=MsG0480020052.01.T01:cds;Parent=MsG0480020052.01.T01 |
| Gene Sequence |
| Protein sequence |
