Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007997.01.T01 | XP_013463255.1 | 90.038 | 261 | 17 | 2 | 5 | 261 | 40 | 295 | 6.72E-151 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007997.01.T01 | Q9C7J6 | 30.744 | 309 | 161 | 9 | 1 | 261 | 61 | 364 | 6.15E-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047974.01 | MsG0280007997.01 | 0.810404 | 1.172048e-50 | 7.058407e-48 |
| MsG0180000314.01 | MsG0280007997.01 | 0.810328 | 1.217641e-50 | 7.318257e-48 |
| MsG0180003656.01 | MsG0280007997.01 | 0.805055 | 1.605428e-49 | 8.410621e-47 |
| MsG0180003786.01 | MsG0280007997.01 | 0.806998 | 6.264279e-50 | 3.449375e-47 |
| MsG0180003920.01 | MsG0280007997.01 | 0.812873 | 3.404590e-51 | 2.189539e-48 |
| MsG0180003943.01 | MsG0280007997.01 | 0.831428 | 1.678889e-55 | 1.821252e-52 |
| MsG0180004099.01 | MsG0280007997.01 | 0.838756 | 2.379677e-57 | 3.218366e-54 |
| MsG0180004707.01 | MsG0280007997.01 | 0.805352 | 1.391609e-49 | 7.345974e-47 |
| MsG0180004711.01 | MsG0280007997.01 | 0.803055 | 4.184958e-49 | 2.082357e-46 |
| MsG0180006000.01 | MsG0280007997.01 | 0.839966 | 1.154606e-57 | 1.620861e-54 |
| MsG0280006311.01 | MsG0280007997.01 | 0.822532 | 2.252486e-53 | 1.890491e-50 |
| MsG0280007997.01 | MsG0280008362.01 | 0.806481 | 8.056636e-50 | 4.377730e-47 |
| MsG0280007997.01 | MsG0280009794.01 | 0.838787 | 2.337064e-57 | 3.163699e-54 |
| MsG0280007997.01 | MsG0280010779.01 | 0.800930 | 1.143922e-48 | 5.393452e-46 |
| MsG0280007997.01 | MsG0280011014.01 | 0.821718 | 3.479398e-53 | 2.853113e-50 |
| MsG0280007997.01 | MsG0280011282.01 | 0.809848 | 1.545065e-50 | 9.170657e-48 |
| MsG0280007997.01 | MsG0380012471.01 | 0.822916 | 1.833660e-53 | 1.555801e-50 |
| MsG0280007997.01 | MsG0380013475.01 | 0.807747 | 4.345068e-50 | 2.439733e-47 |
| MsG0280007997.01 | MsG0380015677.01 | 0.809606 | 1.740930e-50 | 1.026800e-47 |
| MsG0280007997.01 | MsG0380016140.01 | 0.803123 | 4.050814e-49 | 2.019162e-46 |
| MsG0280007997.01 | MsG0380016703.01 | 0.807015 | 6.214048e-50 | 3.423196e-47 |
| MsG0280007997.01 | MsG0380016920.01 | 0.819727 | 9.976111e-53 | 7.739257e-50 |
| MsG0280007997.01 | MsG0380016994.01 | 0.828407 | 9.144333e-55 | 9.081382e-52 |
| MsG0280007997.01 | MsG0380017061.01 | 0.816995 | 4.148448e-52 | 2.984868e-49 |
| MsG0280007997.01 | MsG0380017159.01 | 0.817808 | 2.721361e-52 | 2.002099e-49 |
| MsG0280007997.01 | MsG0480018397.01 | 0.837384 | 5.367066e-57 | 6.959395e-54 |
| MsG0280007997.01 | MsG0480020699.01 | 0.805986 | 1.024208e-49 | 5.495670e-47 |
| MsG0280007997.01 | MsG0480020847.01 | 0.815080 | 1.110393e-51 | 7.580676e-49 |
| MsG0280007997.01 | MsG0480022325.01 | 0.812681 | 3.751208e-51 | 2.400426e-48 |
| MsG0280007997.01 | MsG0480023832.01 | 0.806962 | 6.376322e-50 | 3.507778e-47 |
| MsG0280007997.01 | MsG0580024489.01 | 0.802593 | 5.212515e-49 | 2.563497e-46 |
| MsG0280007997.01 | MsG0580024758.01 | 0.811271 | 7.612232e-51 | 4.691159e-48 |
| MsG0280007997.01 | MsG0580026145.01 | 0.811188 | 7.932888e-51 | 4.878159e-48 |
| MsG0280007997.01 | MsG0680030949.01 | 0.814293 | 1.658351e-51 | 1.108421e-48 |
| MsG0280007997.01 | MsG0780036752.01 | 0.833460 | 5.267027e-56 | 6.069394e-53 |
| MsG0280007997.01 | MsG0780036815.01 | 0.816443 | 5.516827e-52 | 3.909354e-49 |
| MsG0280007997.01 | MsG0780036816.01 | 0.819580 | 1.077846e-52 | 8.327569e-50 |
| MsG0280007997.01 | MsG0780038332.01 | 0.802289 | 6.020312e-49 | 2.937991e-46 |
| MsG0280007997.01 | MsG0780039137.01 | 0.809479 | 1.854273e-50 | 1.089868e-47 |
| MsG0280007997.01 | MsG0780041063.01 | 0.818952 | 1.498718e-52 | 1.137992e-49 |
| MsG0280007997.01 | MsG0880042961.01 | 0.813092 | 3.049103e-51 | 1.972392e-48 |
| MsG0280007997.01 | MsG0880043614.01 | 0.824188 | 9.240489e-54 | 8.126762e-51 |
| MsG0280007997.01 | MsG0880044782.01 | 0.802481 | 5.495567e-49 | 2.694940e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007997.01.T01 | MTR_2g436830 | 90.038 | 261 | 17 | 2 | 5 | 261 | 40 | 295 | 8.14e-155 | 432 |
| MsG0280007997.01.T01 | MTR_4g119820 | 48.611 | 288 | 97 | 12 | 1 | 261 | 95 | 358 | 4.53e-67 | 212 |
| MsG0280007997.01.T01 | MTR_6g045583 | 51.429 | 70 | 28 | 3 | 193 | 261 | 95 | 159 | 6.61e-11 | 61.2 |
| MsG0280007997.01.T01 | MTR_5g049870 | 51.429 | 70 | 28 | 3 | 193 | 261 | 95 | 159 | 7.18e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007997.01.T01 | AT1G56210 | 30.744 | 309 | 161 | 9 | 1 | 261 | 61 | 364 | 6.27e-14 | 71.2 |
| MsG0280007997.01.T01 | AT5G27690 | 46.032 | 63 | 34 | 0 | 5 | 67 | 55 | 117 | 7.59e-12 | 65.1 |
Find 71 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGACCAGCTTCCTTAAA+AGG | 0.155110 | 2:+24107771 | None:intergenic |
| TGCAAGCTTTGTGCTTCTTT+TGG | 0.232522 | 2:+24107656 | None:intergenic |
| TCTGACCAAGATTCTGAAAT+TGG | 0.246160 | 2:+24107375 | None:intergenic |
| CCTAGCTTTGTTGATCAATA+TGG | 0.246316 | 2:-24107176 | MsG0280007997.01.T01:CDS |
| TGATCAATATGGTACTTATC+AGG | 0.301999 | 2:-24107165 | MsG0280007997.01.T01:CDS |
| GGATTCCAATTTCAGAATCT+TGG | 0.332701 | 2:-24107380 | MsG0280007997.01.T01:CDS |
| TCAGAATCTTGGTCAGACTA+TGG | 0.358813 | 2:-24107369 | MsG0280007997.01.T01:CDS |
| TGTTCACAATCCTCACATAA+TGG | 0.367064 | 2:+24107082 | None:intergenic |
| TTACAATAGGTTCTATCCTA+TGG | 0.381858 | 2:-24107252 | MsG0280007997.01.T01:CDS |
| ATATGTCATCAGCTTACAAT+AGG | 0.388071 | 2:-24107265 | MsG0280007997.01.T01:CDS |
| TTTAGTGATGAAAATGCTAA+TGG | 0.402104 | 2:-24107110 | MsG0280007997.01.T01:CDS |
| CTGGAAAGTACGCTGAGATT+TGG | 0.402278 | 2:-24107748 | MsG0280007997.01.T01:CDS |
| AAAGATGGGTGTAGTGGAAA+TGG | 0.408222 | 2:-24107470 | MsG0280007997.01.T01:CDS |
| CCCTTCCCGTCAAGATTCTC+CGG | 0.414067 | 2:+24107725 | None:intergenic |
| GGAAATGGAAATGGAAATGA+TGG | 0.428718 | 2:-24107449 | MsG0280007997.01.T01:CDS |
| ATCTTGTATCCATCAGAAAC+TGG | 0.431923 | 2:-24107308 | MsG0280007997.01.T01:CDS |
| CACCGGAGGAACATGGTTAC+CGG | 0.442748 | 2:+24107532 | None:intergenic |
| TTTACCATGCATAACTATGA+AGG | 0.443995 | 2:-24107863 | None:intergenic |
| GGTACTTATCAGGTTCAATC+TGG | 0.444832 | 2:-24107155 | MsG0280007997.01.T01:CDS |
| TCATCACTAAACAACTCAAA+AGG | 0.460526 | 2:+24107122 | None:intergenic |
| TTAAGGAAGCTGGTCAAAGC+TGG | 0.463380 | 2:-24107767 | MsG0280007997.01.T01:CDS |
| TTTGACCAGCTTCCTTAAAA+GGG | 0.472837 | 2:+24107772 | None:intergenic |
| GGGTGTAGTGGAAATGGAAA+TGG | 0.474373 | 2:-24107464 | MsG0280007997.01.T01:CDS |
| AGTGGAAATGGAAATGGAAA+TGG | 0.477221 | 2:-24107458 | MsG0280007997.01.T01:CDS |
| AACTAACGCCGGAGAGTCGC+CGG | 0.479828 | 2:-24107567 | MsG0280007997.01.T01:CDS |
| AGCACAAAGCTTGCAAAACA+AGG | 0.487035 | 2:-24107648 | MsG0280007997.01.T01:CDS |
| GAAGATGGAACATGATAAGA+AGG | 0.504811 | 2:+24107215 | None:intergenic |
| TTCTATCCTATGGGAAGAGT+TGG | 0.506361 | 2:-24107242 | MsG0280007997.01.T01:CDS |
| TAGGGCTGAGATTCACTTGG+TGG | 0.512971 | 2:+24107345 | None:intergenic |
| GGCCGGTAACCATGTTCCTC+CGG | 0.513408 | 2:-24107534 | MsG0280007997.01.T01:CDS |
| GTTCCTCCGGTGAGTGGTGG+AGG | 0.522411 | 2:-24107521 | MsG0280007997.01.T01:CDS |
| AATTGGAATCCACTGTGTGC+TGG | 0.529577 | 2:+24107392 | None:intergenic |
| AAGATTGATTGCTGACGTGT+AGG | 0.532112 | 2:+24107326 | None:intergenic |
| TACAATAGGTTCTATCCTAT+GGG | 0.533406 | 2:-24107251 | MsG0280007997.01.T01:CDS |
| ATTTGGCCGGAGAATCTTGA+CGG | 0.534632 | 2:-24107731 | MsG0280007997.01.T01:CDS |
| CCATATTGATCAACAAAGCT+AGG | 0.542434 | 2:+24107176 | None:intergenic |
| GTAACAGTAACTGGAAATGT+TGG | 0.543025 | 2:-24107803 | MsG0280007997.01.T01:CDS |
| AGATTGATTGCTGACGTGTA+GGG | 0.544485 | 2:+24107327 | None:intergenic |
| AACTGGTTATTACCCTCCAA+TGG | 0.550201 | 2:-24107291 | MsG0280007997.01.T01:CDS |
| GGGTAATAACCAGTTTCTGA+TGG | 0.551722 | 2:+24107299 | None:intergenic |
| GCCGGAGAATCTTGACGGGA+AGG | 0.553950 | 2:-24107726 | MsG0280007997.01.T01:CDS |
| GTTACCAAGTGTGAAAATGA+AGG | 0.554175 | 2:-24107614 | MsG0280007997.01.T01:CDS |
| GGACACGTGTAGGGTGAAGA+TGG | 0.555418 | 2:+24107200 | None:intergenic |
| GCTGATGACATATAAACCAT+TGG | 0.558867 | 2:+24107275 | None:intergenic |
| CCGGAGAATCTTGACGGGAA+GGG | 0.563881 | 2:-24107725 | MsG0280007997.01.T01:CDS |
| TTTGGCCGGAGAATCTTGAC+GGG | 0.565237 | 2:-24107730 | MsG0280007997.01.T01:CDS |
| CATGTTCCTCCGGTGAGTGG+TGG | 0.568406 | 2:-24107524 | MsG0280007997.01.T01:CDS |
| AACCATGTTCCTCCGGTGAG+TGG | 0.571405 | 2:-24107527 | MsG0280007997.01.T01:CDS |
| CCTCCGGTGAGTGGTGGAGG+TGG | 0.575221 | 2:-24107518 | MsG0280007997.01.T01:CDS |
| CACCACTCACCGGAGGAACA+TGG | 0.583260 | 2:+24107525 | None:intergenic |
| AAAGTACGCTGAGATTTGGC+CGG | 0.585267 | 2:-24107744 | MsG0280007997.01.T01:CDS |
| AAGCTAGGAGGACACGTGTA+GGG | 0.590451 | 2:+24107191 | None:intergenic |
| AACAACTCAAAAGGAATCAA+CGG | 0.594539 | 2:+24107131 | None:intergenic |
| AGAGTCGCCGGAAAACTCAC+CGG | 0.606377 | 2:-24107555 | MsG0280007997.01.T01:CDS |
| AAAGCTAGGAGGACACGTGT+AGG | 0.607435 | 2:+24107190 | None:intergenic |
| GATGACATATAAACCATTGG+AGG | 0.607599 | 2:+24107278 | None:intergenic |
| AGGGCTGAGATTCACTTGGT+GGG | 0.607822 | 2:+24107346 | None:intergenic |
| GGATCACCAACTCTTCCCAT+AGG | 0.609702 | 2:+24107236 | None:intergenic |
| GAACCACCTCCACCACTCAC+CGG | 0.609920 | 2:+24107515 | None:intergenic |
| AACACCTTCATAGTTATGCA+TGG | 0.610166 | 2:+24107859 | None:intergenic |
| TCGCCGGAAAACTCACCGGC+CGG | 0.623716 | 2:-24107551 | MsG0280007997.01.T01:CDS |
| AATGGAAATGATGGAAGTGA+TGG | 0.633579 | 2:-24107440 | MsG0280007997.01.T01:CDS |
| TTGACTACAGTAGCTAAGAG+TGG | 0.651669 | 2:-24107416 | MsG0280007997.01.T01:CDS |
| ATGACATATAAACCATTGGA+GGG | 0.654131 | 2:+24107279 | None:intergenic |
| GGAGGAACATGGTTACCGGC+CGG | 0.661117 | 2:+24107536 | None:intergenic |
| GCACAAAGCTTGCAAAACAA+GGG | 0.661538 | 2:-24107647 | MsG0280007997.01.T01:CDS |
| CCACCTCCACCACTCACCGG+AGG | 0.681711 | 2:+24107518 | None:intergenic |
| AATGGATGTTCCATTATGTG+AGG | 0.691882 | 2:-24107092 | None:intergenic |
| TATTGATCAACAAAGCTAGG+AGG | 0.694963 | 2:+24107179 | None:intergenic |
| GTGTAGGGCTGAGATTCACT+TGG | 0.708981 | 2:+24107342 | None:intergenic |
| AAGAGTGGACCAGCACACAG+TGG | 0.728445 | 2:-24107401 | MsG0280007997.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGAAGAAAAAGAAAGA+TGG | - | Chr2:24107466-24107485 | MsG0280007997.01.T01:CDS | 20.0% |
| !! | ATAAGAAGAAAAAGAAAGAT+GGG | - | Chr2:24107467-24107486 | MsG0280007997.01.T01:CDS | 20.0% |
| ! | TTTAGTGATGAAAATGCTAA+TGG | - | Chr2:24107841-24107860 | MsG0280007997.01.T01:CDS | 25.0% |
| AAAAAGTCAAAAACTAACGC+CGG | - | Chr2:24107373-24107392 | MsG0280007997.01.T01:CDS | 30.0% | |
| AACAACTCAAAAGGAATCAA+CGG | + | Chr2:24107823-24107842 | None:intergenic | 30.0% | |
| ATATGTCATCAGCTTACAAT+AGG | - | Chr2:24107686-24107705 | MsG0280007997.01.T01:CDS | 30.0% | |
| ATGACATATAAACCATTGGA+GGG | + | Chr2:24107675-24107694 | None:intergenic | 30.0% | |
| CAAAGAGAAGAAAAAGAACA+AGG | - | Chr2:24107261-24107280 | MsG0280007997.01.T01:CDS | 30.0% | |
| CAACAAAAAGTAACAGTAAC+TGG | - | Chr2:24107139-24107158 | MsG0280007997.01.T01:CDS | 30.0% | |
| TACAATAGGTTCTATCCTAT+GGG | - | Chr2:24107700-24107719 | MsG0280007997.01.T01:CDS | 30.0% | |
| TCATCACTAAACAACTCAAA+AGG | + | Chr2:24107832-24107851 | None:intergenic | 30.0% | |
| TGATCAATATGGTACTTATC+AGG | - | Chr2:24107786-24107805 | MsG0280007997.01.T01:CDS | 30.0% | |
| TTACAATAGGTTCTATCCTA+TGG | - | Chr2:24107699-24107718 | MsG0280007997.01.T01:CDS | 30.0% | |
| ! | TTTACCTTCATTTTCACACT+TGG | + | Chr2:24107344-24107363 | None:intergenic | 30.0% |
| AAAAAGAAAGATGGGTGTAG+TGG | - | Chr2:24107475-24107494 | MsG0280007997.01.T01:CDS | 35.0% | |
| AGTGGAAATGGAAATGGAAA+TGG | - | Chr2:24107493-24107512 | MsG0280007997.01.T01:CDS | 35.0% | |
| ATCTTGTATCCATCAGAAAC+TGG | - | Chr2:24107643-24107662 | MsG0280007997.01.T01:CDS | 35.0% | |
| CCATATTGATCAACAAAGCT+AGG | + | Chr2:24107778-24107797 | None:intergenic | 35.0% | |
| GAAGATGGAACATGATAAGA+AGG | + | Chr2:24107739-24107758 | None:intergenic | 35.0% | |
| GATGACATATAAACCATTGG+AGG | + | Chr2:24107676-24107695 | None:intergenic | 35.0% | |
| GCTGATGACATATAAACCAT+TGG | + | Chr2:24107679-24107698 | None:intergenic | 35.0% | |
| GGAAATGGAAATGGAAATGA+TGG | - | Chr2:24107502-24107521 | MsG0280007997.01.T01:CDS | 35.0% | |
| GGATTCCAATTTCAGAATCT+TGG | - | Chr2:24107571-24107590 | MsG0280007997.01.T01:CDS | 35.0% | |
| GTAACAGTAACTGGAAATGT+TGG | - | Chr2:24107148-24107167 | MsG0280007997.01.T01:CDS | 35.0% | |
| GTTACCAAGTGTGAAAATGA+AGG | - | Chr2:24107337-24107356 | MsG0280007997.01.T01:CDS | 35.0% | |
| TATTGATCAACAAAGCTAGG+AGG | + | Chr2:24107775-24107794 | None:intergenic | 35.0% | |
| TTTGACCAGCTTCCTTAAAA+GGG | + | Chr2:24107182-24107201 | None:intergenic | 35.0% | |
| ! | AATGGAAATGATGGAAGTGA+TGG | - | Chr2:24107511-24107530 | MsG0280007997.01.T01:CDS | 35.0% |
| ! | GTTCTTTTTCTTCTCTTTGC+CGG | + | Chr2:24107260-24107279 | None:intergenic | 35.0% |
| !! | CCTAGCTTTGTTGATCAATA+TGG | - | Chr2:24107775-24107794 | MsG0280007997.01.T01:CDS | 35.0% |
| !! | TCTGACCAAGATTCTGAAAT+TGG | + | Chr2:24107579-24107598 | None:intergenic | 35.0% |
| AACTGGTTATTACCCTCCAA+TGG | - | Chr2:24107660-24107679 | MsG0280007997.01.T01:CDS | 40.0% | |
| AAGATTGATTGCTGACGTGT+AGG | + | Chr2:24107628-24107647 | None:intergenic | 40.0% | |
| AGATTGATTGCTGACGTGTA+GGG | + | Chr2:24107627-24107646 | None:intergenic | 40.0% | |
| AGCACAAAGCTTGCAAAACA+AGG | - | Chr2:24107303-24107322 | MsG0280007997.01.T01:CDS | 40.0% | |
| CTTTGACCAGCTTCCTTAAA+AGG | + | Chr2:24107183-24107202 | None:intergenic | 40.0% | |
| GCACAAAGCTTGCAAAACAA+GGG | - | Chr2:24107304-24107323 | MsG0280007997.01.T01:CDS | 40.0% | |
| GGGTAATAACCAGTTTCTGA+TGG | + | Chr2:24107655-24107674 | None:intergenic | 40.0% | |
| GGTACTTATCAGGTTCAATC+TGG | - | Chr2:24107796-24107815 | MsG0280007997.01.T01:CDS | 40.0% | |
| TCAGAATCTTGGTCAGACTA+TGG | - | Chr2:24107582-24107601 | MsG0280007997.01.T01:CDS | 40.0% | |
| TTCTATCCTATGGGAAGAGT+TGG | - | Chr2:24107709-24107728 | MsG0280007997.01.T01:CDS | 40.0% | |
| TTGACTACAGTAGCTAAGAG+TGG | - | Chr2:24107535-24107554 | MsG0280007997.01.T01:CDS | 40.0% | |
| ! | AAAGATGGGTGTAGTGGAAA+TGG | - | Chr2:24107481-24107500 | MsG0280007997.01.T01:CDS | 40.0% |
| !! | TGCAAGCTTTGTGCTTCTTT+TGG | + | Chr2:24107298-24107317 | None:intergenic | 40.0% |
| !!! | TTGGTGTTGAGACCCTTTTA+AGG | - | Chr2:24107167-24107186 | MsG0280007997.01.T01:CDS | 40.0% |
| AAAGTACGCTGAGATTTGGC+CGG | - | Chr2:24107207-24107226 | MsG0280007997.01.T01:CDS | 45.0% | |
| AATTGGAATCCACTGTGTGC+TGG | + | Chr2:24107562-24107581 | None:intergenic | 45.0% | |
| ATTTGGCCGGAGAATCTTGA+CGG | - | Chr2:24107220-24107239 | MsG0280007997.01.T01:CDS | 45.0% | |
| TTAAGGAAGCTGGTCAAAGC+TGG | - | Chr2:24107184-24107203 | MsG0280007997.01.T01:CDS | 45.0% | |
| ! | CTGGAAAGTACGCTGAGATT+TGG | - | Chr2:24107203-24107222 | MsG0280007997.01.T01:CDS | 45.0% |
| ! | GGGTGTAGTGGAAATGGAAA+TGG | - | Chr2:24107487-24107506 | MsG0280007997.01.T01:CDS | 45.0% |
| !! | TGAGACCCTTTTAAGGAAGC+TGG | - | Chr2:24107174-24107193 | MsG0280007997.01.T01:CDS | 45.0% |
| AAAGCTAGGAGGACACGTGT+AGG | + | Chr2:24107764-24107783 | None:intergenic | 50.0% | |
| AAGCTAGGAGGACACGTGTA+GGG | + | Chr2:24107763-24107782 | None:intergenic | 50.0% | |
| AGGGCTGAGATTCACTTGGT+GGG | + | Chr2:24107608-24107627 | None:intergenic | 50.0% | |
| GGATCACCAACTCTTCCCAT+AGG | + | Chr2:24107718-24107737 | None:intergenic | 50.0% | |
| GTGTAGGGCTGAGATTCACT+TGG | + | Chr2:24107612-24107631 | None:intergenic | 50.0% | |
| TAGGGCTGAGATTCACTTGG+TGG | + | Chr2:24107609-24107628 | None:intergenic | 50.0% | |
| TTTGGCCGGAGAATCTTGAC+GGG | - | Chr2:24107221-24107240 | MsG0280007997.01.T01:CDS | 50.0% | |
| AACCATGTTCCTCCGGTGAG+TGG | - | Chr2:24107424-24107443 | MsG0280007997.01.T01:CDS | 55.0% | |
| AAGAGTGGACCAGCACACAG+TGG | - | Chr2:24107550-24107569 | MsG0280007997.01.T01:CDS | 55.0% | |
| AGAGTCGCCGGAAAACTCAC+CGG | - | Chr2:24107396-24107415 | MsG0280007997.01.T01:CDS | 55.0% | |
| CACCGGAGGAACATGGTTAC+CGG | + | Chr2:24107422-24107441 | None:intergenic | 55.0% | |
| CCCTTCCCGTCAAGATTCTC+CGG | + | Chr2:24107229-24107248 | None:intergenic | 55.0% | |
| CCGGAGAATCTTGACGGGAA+GGG | - | Chr2:24107226-24107245 | MsG0280007997.01.T01:CDS | 55.0% | |
| GACGGGAAGGGAAAAAGCTC+CGG | - | Chr2:24107238-24107257 | MsG0280007997.01.T01:CDS | 55.0% | |
| GGACACGTGTAGGGTGAAGA+TGG | + | Chr2:24107754-24107773 | None:intergenic | 55.0% | |
| ! | TGAGTTTTCCGGCGACTCTC+CGG | + | Chr2:24107395-24107414 | None:intergenic | 55.0% |
| ! | TTACCGGCCGGTGAGTTTTC+CGG | + | Chr2:24107406-24107425 | None:intergenic | 55.0% |
| AACTAACGCCGGAGAGTCGC+CGG | - | Chr2:24107384-24107403 | MsG0280007997.01.T01:CDS | 60.0% | |
| CACCACTCACCGGAGGAACA+TGG | + | Chr2:24107429-24107448 | None:intergenic | 60.0% | |
| CATGTTCCTCCGGTGAGTGG+TGG | - | Chr2:24107427-24107446 | MsG0280007997.01.T01:CDS | 60.0% | |
| GAACCACCTCCACCACTCAC+CGG | + | Chr2:24107439-24107458 | None:intergenic | 60.0% | |
| GCCGGAGAATCTTGACGGGA+AGG | - | Chr2:24107225-24107244 | MsG0280007997.01.T01:CDS | 60.0% | |
| GGAGGAACATGGTTACCGGC+CGG | + | Chr2:24107418-24107437 | None:intergenic | 60.0% | |
| GGCCGGTAACCATGTTCCTC+CGG | - | Chr2:24107417-24107436 | MsG0280007997.01.T01:CDS | 60.0% | |
| GTTCCTCCGGTGAGTGGTGG+AGG | - | Chr2:24107430-24107449 | MsG0280007997.01.T01:CDS | 65.0% | |
| TCGCCGGAAAACTCACCGGC+CGG | - | Chr2:24107400-24107419 | MsG0280007997.01.T01:CDS | 65.0% | |
| CCACCTCCACCACTCACCGG+AGG | + | Chr2:24107436-24107455 | None:intergenic | 70.0% | |
| ! | CCTCCGGTGAGTGGTGGAGG+TGG | - | Chr2:24107433-24107452 | MsG0280007997.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 24107094 | 24107879 | 24107094 | ID=MsG0280007997.01;Name=MsG0280007997.01 |
| Chr2 | mRNA | 24107094 | 24107879 | 24107094 | ID=MsG0280007997.01.T01;Parent=MsG0280007997.01;Name=MsG0280007997.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|261 |
| Chr2 | exon | 24107094 | 24107879 | 24107094 | ID=MsG0280007997.01.T01:exon:40551;Parent=MsG0280007997.01.T01 |
| Chr2 | CDS | 24107094 | 24107879 | 24107094 | ID=MsG0280007997.01.T01:cds;Parent=MsG0280007997.01.T01 |
| Gene Sequence |
| Protein sequence |
