Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000314.01.T01 | XP_003589097.1 | 95.025 | 603 | 27 | 2 | 1 | 602 | 1 | 601 | 0 | 1034 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000314.01.T01 | Q94AI1 | 42.667 | 675 | 273 | 24 | 1 | 602 | 1 | 634 | 1.39E-120 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000314.01.T01 | G7ICE7 | 95.025 | 603 | 27 | 2 | 1 | 602 | 1 | 601 | 0.0 | 1034 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047974.01 | MsG0180000314.01 | 0.821135 | 4.743652e-53 | 3.826970e-50 |
| MsG0080049140.01 | MsG0180000314.01 | 0.864889 | 8.785405e-65 | 2.802098e-61 |
| MsG0180000314.01 | MsG0180002421.01 | 0.809172 | 2.157980e-50 | 1.258078e-47 |
| MsG0180000314.01 | MsG0180003427.01 | 0.839642 | 1.402440e-57 | 1.948813e-54 |
| MsG0180000314.01 | MsG0180003485.01 | 0.820372 | 7.100643e-53 | 5.608382e-50 |
| MsG0180000314.01 | MsG0180003656.01 | 0.814451 | 1.530807e-51 | 1.027514e-48 |
| MsG0180000314.01 | MsG0180003796.01 | 0.824721 | 6.924148e-54 | 6.184109e-51 |
| MsG0180000314.01 | MsG0180003994.01 | 0.811501 | 6.783625e-51 | 4.206308e-48 |
| MsG0180000314.01 | MsG0180004049.01 | 0.825066 | 5.741136e-54 | 5.177866e-51 |
| MsG0180000314.01 | MsG0180004099.01 | 0.837754 | 4.313189e-57 | 5.658207e-54 |
| MsG0180000314.01 | MsG0180004661.01 | 0.819628 | 1.051066e-52 | 8.130909e-50 |
| MsG0180000314.01 | MsG0180004711.01 | 0.852148 | 5.583636e-61 | 1.156021e-57 |
| MsG0180000314.01 | MsG0180004806.01 | 0.814016 | 1.909398e-51 | 1.266619e-48 |
| MsG0180000314.01 | MsG0180004864.01 | 0.812314 | 4.512010e-51 | 2.859339e-48 |
| MsG0180000314.01 | MsG0180005435.01 | 0.812774 | 3.579707e-51 | 2.296141e-48 |
| MsG0180000314.01 | MsG0180005835.01 | 0.811943 | 5.437706e-51 | 3.411233e-48 |
| MsG0180000314.01 | MsG0180006000.01 | 0.871367 | 7.215758e-67 | 2.903252e-63 |
| MsG0180000314.01 | MsG0280006311.01 | 0.845575 | 3.729133e-59 | 6.241840e-56 |
| MsG0180000314.01 | MsG0280006540.01 | 0.852333 | 4.946540e-61 | 1.030170e-57 |
| MsG0180000314.01 | MsG0280006922.01 | 0.815427 | 9.297748e-52 | 6.408443e-49 |
| MsG0180000314.01 | MsG0280007359.01 | 0.848924 | 4.494968e-60 | 8.380812e-57 |
| MsG0180000314.01 | MsG0280007997.01 | 0.810328 | 1.217641e-50 | 7.318257e-48 |
| MsG0180000314.01 | MsG0280008280.01 | 0.818941 | 1.507168e-52 | 1.144108e-49 |
| MsG0180000314.01 | MsG0280008401.01 | 0.814569 | 1.441200e-51 | 9.704750e-49 |
| MsG0180000314.01 | MsG0280009266.01 | 0.801364 | 9.325051e-49 | 4.445102e-46 |
| MsG0180000314.01 | MsG0280009289.01 | 0.818895 | 1.543495e-52 | 1.170135e-49 |
| MsG0180000314.01 | MsG0280009493.01 | 0.801558 | 8.506733e-49 | 4.074792e-46 |
| MsG0180000314.01 | MsG0280009752.01 | 0.838915 | 2.164728e-57 | 2.941783e-54 |
| MsG0180000314.01 | MsG0280009794.01 | 0.813021 | 3.159675e-51 | 2.040161e-48 |
| MsG0180000314.01 | MsG0280010779.01 | 0.850264 | 1.900348e-60 | 3.701257e-57 |
| MsG0180000314.01 | MsG0280010795.01 | 0.816872 | 4.421283e-52 | 3.170416e-49 |
| MsG0180000314.01 | MsG0280011014.01 | 0.806882 | 6.627444e-50 | 3.638468e-47 |
| MsG0180000314.01 | MsG0280011154.01 | 0.809024 | 2.320831e-50 | 1.347600e-47 |
| MsG0180000314.01 | MsG0280011282.01 | 0.814394 | 1.575819e-51 | 1.056157e-48 |
| MsG0180000314.01 | MsG0280011416.01 | 0.802394 | 5.727992e-49 | 2.802841e-46 |
| MsG0180000314.01 | MsG0380012788.01 | 0.843314 | 1.512547e-58 | 2.357506e-55 |
| MsG0180000314.01 | MsG0380012808.01 | 0.825697 | 4.069818e-54 | 3.737101e-51 |
| MsG0180000314.01 | MsG0380013636.01 | 0.824487 | 7.861477e-54 | 6.973081e-51 |
| MsG0180000314.01 | MsG0380014387.01 | 0.834118 | 3.605357e-56 | 4.237653e-53 |
| MsG0180000314.01 | MsG0380014594.01 | 0.805426 | 1.342660e-49 | 7.101119e-47 |
| MsG0180000314.01 | MsG0380014808.01 | 0.840932 | 6.453373e-58 | 9.334287e-55 |
| MsG0180000314.01 | MsG0380015548.01 | 0.844709 | 6.389890e-59 | 1.040435e-55 |
| MsG0180000314.01 | MsG0380016140.01 | 0.851025 | 1.160641e-60 | 2.317864e-57 |
| MsG0180000314.01 | MsG0380016703.01 | 0.835603 | 1.524195e-56 | 1.873050e-53 |
| MsG0180000314.01 | MsG0380016920.01 | 0.839176 | 1.853584e-57 | 2.539054e-54 |
| MsG0180000314.01 | MsG0380016994.01 | 0.810506 | 1.114406e-50 | 6.729517e-48 |
| MsG0180000314.01 | MsG0380017159.01 | 0.826065 | 3.328424e-54 | 3.088380e-51 |
| MsG0180000314.01 | MsG0380017164.01 | 0.824577 | 7.484879e-54 | 6.656968e-51 |
| MsG0180000314.01 | MsG0480018397.01 | 0.856411 | 3.277195e-62 | 7.815233e-59 |
| MsG0180000314.01 | MsG0480018526.01 | 0.813396 | 2.614001e-51 | 1.705196e-48 |
| MsG0180000314.01 | MsG0480018919.01 | 0.803126 | 4.045338e-49 | 2.016578e-46 |
| MsG0180000314.01 | MsG0480019699.01 | 0.802599 | 5.196129e-49 | 2.555845e-46 |
| MsG0180000314.01 | MsG0480019710.01 | 0.803913 | 2.777681e-49 | 1.413106e-46 |
| MsG0180000314.01 | MsG0480019922.01 | 0.805550 | 1.264431e-49 | 6.708621e-47 |
| MsG0180000314.01 | MsG0480020402.01 | 0.823498 | 1.341384e-53 | 1.156971e-50 |
| MsG0180000314.01 | MsG0480020495.01 | 0.845724 | 3.397961e-59 | 5.715612e-56 |
| MsG0180000314.01 | MsG0480020699.01 | 0.818747 | 1.667738e-52 | 1.259067e-49 |
| MsG0180000314.01 | MsG0480020847.01 | 0.848545 | 5.725309e-60 | 1.054314e-56 |
| MsG0180000314.01 | MsG0480020909.01 | 0.805998 | 1.018181e-49 | 5.464994e-47 |
| MsG0180000314.01 | MsG0480020965.01 | 0.820957 | 5.212486e-53 | 4.184724e-50 |
| MsG0180000314.01 | MsG0480021013.01 | 0.813805 | 2.124858e-51 | 1.401532e-48 |
| MsG0180000314.01 | MsG0480022313.01 | 0.805004 | 1.645400e-49 | 8.608504e-47 |
| MsG0180000314.01 | MsG0480022331.01 | 0.827712 | 1.344259e-54 | 1.308137e-51 |
| MsG0180000314.01 | MsG0480022549.01 | 0.814549 | 1.455887e-51 | 9.798420e-49 |
| MsG0180000314.01 | MsG0480022796.01 | 0.800352 | 1.500364e-48 | 6.971074e-46 |
| MsG0180000314.01 | MsG0480022982.01 | 0.825914 | 3.615229e-54 | 3.340349e-51 |
| MsG0180000314.01 | MsG0480022998.01 | 0.848986 | 4.320547e-60 | 8.071388e-57 |
| MsG0180000314.01 | MsG0480023262.01 | 0.855394 | 6.496272e-62 | 1.497843e-58 |
| MsG0180000314.01 | MsG0480023296.01 | 0.824136 | 9.506521e-54 | 8.348148e-51 |
| MsG0180000314.01 | MsG0480023341.01 | 0.821512 | 3.881796e-53 | 3.164438e-50 |
| MsG0180000314.01 | MsG0480023458.01 | 0.874501 | 6.427894e-68 | 2.900477e-64 |
| MsG0180000314.01 | MsG0480023672.01 | 0.819161 | 1.343301e-52 | 1.025732e-49 |
| MsG0180000314.01 | MsG0580024358.01 | 0.800850 | 1.187625e-48 | 5.588194e-46 |
| MsG0180000314.01 | MsG0580024489.01 | 0.855220 | 7.302033e-62 | 1.673433e-58 |
| MsG0180000314.01 | MsG0580024722.01 | 0.802844 | 4.626401e-49 | 2.289932e-46 |
| MsG0180000314.01 | MsG0580024748.01 | 0.807482 | 4.946197e-50 | 2.758178e-47 |
| MsG0180000314.01 | MsG0580024758.01 | 0.825210 | 5.306395e-54 | 4.805721e-51 |
| MsG0180000314.01 | MsG0580024954.01 | 0.817113 | 3.902148e-52 | 2.816526e-49 |
| MsG0180000314.01 | MsG0580025614.01 | 0.837462 | 5.124288e-57 | 6.661501e-54 |
| MsG0180000314.01 | MsG0580026593.01 | 0.808906 | 2.460712e-50 | 1.424283e-47 |
| MsG0180000314.01 | MsG0580028756.01 | 0.863272 | 2.801380e-64 | 8.444317e-61 |
| MsG0180000314.01 | MsG0580029298.01 | 0.835038 | 2.116941e-56 | 2.557702e-53 |
| MsG0180000314.01 | MsG0680030949.01 | 0.840779 | 7.077876e-58 | 1.018954e-54 |
| MsG0180000314.01 | MsG0680031353.01 | 0.827501 | 1.511058e-54 | 1.461441e-51 |
| MsG0180000314.01 | MsG0680031701.01 | 0.816161 | 6.378687e-52 | 4.485677e-49 |
| MsG0180000314.01 | MsG0680032773.01 | 0.818779 | 1.640404e-52 | 1.239518e-49 |
| MsG0180000314.01 | MsG0680035878.01 | 0.800980 | 1.117240e-48 | 5.274552e-46 |
| MsG0180000314.01 | MsG0780035954.01 | 0.822826 | 1.924174e-53 | 1.628505e-50 |
| MsG0180000314.01 | MsG0780036752.01 | 0.826099 | 3.266880e-54 | 3.034273e-51 |
| MsG0180000314.01 | MsG0780036816.01 | 0.817775 | 2.768571e-52 | 2.034969e-49 |
| MsG0180000314.01 | MsG0780038332.01 | 0.808648 | 2.792660e-50 | 1.605510e-47 |
| MsG0180000314.01 | MsG0780039861.01 | 0.823565 | 1.293416e-53 | 1.117673e-50 |
| MsG0180000314.01 | MsG0780040307.01 | 0.844082 | 9.421125e-59 | 1.504127e-55 |
| MsG0180000314.01 | MsG0780040509.01 | 0.816894 | 4.369552e-52 | 3.135093e-49 |
| MsG0180000314.01 | MsG0780040620.01 | 0.803808 | 2.921536e-49 | 1.482141e-46 |
| MsG0180000314.01 | MsG0780040683.01 | 0.808753 | 2.652625e-50 | 1.529213e-47 |
| MsG0180000314.01 | MsG0780040896.01 | 0.829023 | 6.492103e-55 | 6.563350e-52 |
| MsG0180000314.01 | MsG0780041063.01 | 0.857474 | 1.593191e-62 | 3.936825e-59 |
| MsG0180000314.01 | MsG0780041132.01 | 0.846639 | 1.914565e-59 | 3.316898e-56 |
| MsG0180000314.01 | MsG0780041143.01 | 0.806489 | 8.025503e-50 | 4.361688e-47 |
| MsG0180000314.01 | MsG0780041579.01 | 0.851675 | 7.602969e-61 | 1.550642e-57 |
| MsG0180000314.01 | MsG0780041592.01 | 0.810969 | 8.849503e-51 | 5.410977e-48 |
| MsG0180000314.01 | MsG0780041735.01 | 0.815263 | 1.011285e-51 | 6.938649e-49 |
| MsG0180000314.01 | MsG0780041739.01 | 0.812784 | 3.561108e-51 | 2.284827e-48 |
| MsG0180000314.01 | MsG0880042773.01 | 0.815545 | 8.750360e-52 | 6.050794e-49 |
| MsG0180000314.01 | MsG0880042791.01 | 0.814133 | 1.799105e-51 | 1.197241e-48 |
| MsG0180000314.01 | MsG0880042929.01 | 0.808415 | 3.131609e-50 | 1.789544e-47 |
| MsG0180000314.01 | MsG0880043516.01 | 0.831899 | 1.284624e-55 | 1.413421e-52 |
| MsG0180000314.01 | MsG0880043614.01 | 0.856685 | 2.721886e-62 | 6.548813e-59 |
| MsG0180000314.01 | MsG0880043637.01 | 0.823196 | 1.577235e-53 | 1.348824e-50 |
| MsG0180000314.01 | MsG0880045890.01 | 0.833039 | 6.702742e-56 | 7.627989e-53 |
| MsG0180000314.01 | MsG0880047226.01 | 0.820767 | 5.763365e-53 | 4.602218e-50 |
| MsG0180000314.01 | MsG0880047431.01 | 0.810428 | 1.158362e-50 | 6.980425e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000314.01.T01 | MTR_1g018440 | 95.025 | 603 | 27 | 2 | 1 | 602 | 1 | 601 | 0.0 | 1034 |
| MsG0180000314.01.T01 | MTR_1g106735 | 47.255 | 510 | 216 | 12 | 115 | 602 | 120 | 598 | 7.15e-118 | 363 |
| MsG0180000314.01.T01 | MTR_1g106735 | 47.162 | 511 | 216 | 13 | 115 | 602 | 120 | 599 | 4.49e-116 | 358 |
| MsG0180000314.01.T01 | MTR_4g130490 | 48.425 | 254 | 115 | 2 | 362 | 602 | 347 | 597 | 2.25e-58 | 206 |
| MsG0180000314.01.T01 | MTR_4g130490 | 48.425 | 254 | 115 | 2 | 362 | 602 | 347 | 597 | 2.98e-58 | 206 |
| MsG0180000314.01.T01 | MTR_2g028220 | 36.082 | 194 | 124 | 0 | 409 | 602 | 275 | 468 | 9.31e-37 | 144 |
| MsG0180000314.01.T01 | MTR_4g130490 | 48.404 | 188 | 81 | 2 | 362 | 536 | 347 | 531 | 1.69e-36 | 144 |
| MsG0180000314.01.T01 | MTR_2g090050 | 27.711 | 332 | 202 | 8 | 300 | 602 | 149 | 471 | 2.97e-24 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000314.01.T01 | AT1G49890 | 42.667 | 675 | 273 | 24 | 1 | 602 | 1 | 634 | 1.42e-121 | 374 |
| MsG0180000314.01.T01 | AT3G19570 | 43.281 | 573 | 264 | 15 | 64 | 602 | 84 | 629 | 3.98e-116 | 360 |
| MsG0180000314.01.T01 | AT3G19570 | 43.286 | 566 | 260 | 15 | 64 | 595 | 84 | 622 | 3.51e-114 | 354 |
| MsG0180000314.01.T01 | AT3G19570 | 43.575 | 537 | 242 | 15 | 64 | 566 | 84 | 593 | 1.30e-104 | 328 |
| MsG0180000314.01.T01 | AT3G19570 | 43.575 | 537 | 242 | 15 | 64 | 566 | 84 | 593 | 1.30e-104 | 328 |
| MsG0180000314.01.T01 | AT4G30710 | 34.347 | 658 | 308 | 23 | 17 | 602 | 4 | 609 | 4.82e-71 | 240 |
| MsG0180000314.01.T01 | AT4G30710 | 34.195 | 658 | 309 | 23 | 17 | 602 | 4 | 609 | 1.72e-70 | 240 |
| MsG0180000314.01.T01 | AT4G30710 | 34.195 | 658 | 309 | 23 | 17 | 602 | 4 | 609 | 1.72e-70 | 240 |
| MsG0180000314.01.T01 | AT4G30710 | 34.195 | 658 | 309 | 23 | 17 | 602 | 4 | 609 | 4.40e-70 | 239 |
| MsG0180000314.01.T01 | AT5G43160 | 51.866 | 268 | 107 | 6 | 337 | 602 | 1 | 248 | 4.84e-64 | 211 |
| MsG0180000314.01.T01 | AT5G43160 | 51.866 | 268 | 107 | 6 | 337 | 602 | 1 | 248 | 4.84e-64 | 211 |
| MsG0180000314.01.T01 | AT2G24070 | 46.000 | 250 | 117 | 4 | 355 | 602 | 340 | 573 | 5.61e-56 | 199 |
| MsG0180000314.01.T01 | AT2G24070 | 46.000 | 250 | 117 | 4 | 355 | 602 | 340 | 573 | 5.61e-56 | 199 |
| MsG0180000314.01.T01 | AT2G24070 | 46.000 | 250 | 117 | 4 | 355 | 602 | 340 | 573 | 5.61e-56 | 199 |
| MsG0180000314.01.T01 | AT4G25190 | 34.857 | 175 | 113 | 1 | 423 | 596 | 198 | 372 | 1.80e-30 | 124 |
| MsG0180000314.01.T01 | AT4G25190 | 34.659 | 176 | 113 | 2 | 423 | 596 | 198 | 373 | 1.89e-29 | 120 |
| MsG0180000314.01.T01 | AT2G44190 | 34.314 | 204 | 130 | 1 | 387 | 590 | 238 | 437 | 2.92e-29 | 121 |
| MsG0180000314.01.T01 | AT3G60000 | 30.366 | 191 | 131 | 1 | 409 | 599 | 237 | 425 | 2.04e-25 | 110 |
| MsG0180000314.01.T01 | AT3G60000 | 32.203 | 177 | 118 | 1 | 423 | 599 | 251 | 425 | 4.08e-25 | 108 |
| MsG0180000314.01.T01 | AT2G20815 | 33.333 | 180 | 118 | 2 | 424 | 602 | 280 | 458 | 6.58e-21 | 96.7 |
| MsG0180000314.01.T01 | AT2G20815 | 33.333 | 180 | 118 | 2 | 424 | 602 | 203 | 381 | 1.63e-20 | 94.7 |
| MsG0180000314.01.T01 | AT2G20815 | 33.149 | 181 | 118 | 3 | 424 | 602 | 280 | 459 | 1.05e-19 | 92.8 |
| MsG0180000314.01.T01 | AT2G20815 | 33.149 | 181 | 118 | 3 | 424 | 602 | 251 | 430 | 1.47e-19 | 92.4 |
| MsG0180000314.01.T01 | AT5G43155 | 33.449 | 287 | 117 | 16 | 22 | 308 | 18 | 230 | 9.36e-14 | 71.6 |
Find 144 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTTTATCCGTTTCGTTTC+AGG | 0.110567 | 1:+4287277 | MsG0180000314.01.T01:CDS |
| TTTGGAAGATTGGGCTATTC+TGG | 0.179886 | 1:+4289429 | MsG0180000314.01.T01:CDS |
| GTTACTTCTGGTAGTTCTTC+TGG | 0.203202 | 1:+4287725 | MsG0180000314.01.T01:CDS |
| GTCATTGCGGAATTCGTTAT+TGG | 0.251953 | 1:+4287595 | MsG0180000314.01.T01:CDS |
| CAACTGTAACTTTATTCTTT+TGG | 0.255507 | 1:-4288947 | None:intergenic |
| AAACAGAAAATTCGATTTCT+AGG | 0.267547 | 1:+4287450 | MsG0180000314.01.T01:CDS |
| TTGAGAAATTCGAATGGATT+TGG | 0.285233 | 1:+4287557 | MsG0180000314.01.T01:CDS |
| AGGATCATACTTGCTCATTC+AGG | 0.314619 | 1:-4288999 | None:intergenic |
| CATTGAGACTCCTACATAAC+AGG | 0.331265 | 1:+4288176 | MsG0180000314.01.T01:CDS |
| AACAGTTCCTCCGAAGCTTT+TGG | 0.334062 | 1:+4287868 | MsG0180000314.01.T01:CDS |
| TCTTCTGGAGTACAGGAGTT+TGG | 0.345008 | 1:+4287740 | MsG0180000314.01.T01:CDS |
| TTGTATCAGAAAAGCCTCTA+TGG | 0.346941 | 1:+4288883 | MsG0180000314.01.T01:intron |
| TCTTCGAGAAACGGTGGAAT+TGG | 0.348527 | 1:+4287836 | MsG0180000314.01.T01:CDS |
| TTATCAGAAGGAACAAGTTC+AGG | 0.354897 | 1:-4287695 | None:intergenic |
| ACTCTTCCTCTTCCAATTGT+CGG | 0.357125 | 1:-4287410 | None:intergenic |
| AGATGATCTATTTGGAAGAT+TGG | 0.359337 | 1:+4289419 | MsG0180000314.01.T01:intron |
| GATAATGAAAGTGTTACTTC+TGG | 0.379947 | 1:+4287713 | MsG0180000314.01.T01:CDS |
| GAAGTAACTTCTCGTGCTTT+CGG | 0.386297 | 1:-4287011 | None:intergenic |
| ATTCCACCGTTTCTCGAAGA+TGG | 0.387096 | 1:-4287833 | None:intergenic |
| GATGATCTATTTGGAAGATT+GGG | 0.390025 | 1:+4289420 | MsG0180000314.01.T01:intron |
| ACGGTTACAACACCGACAAT+TGG | 0.406091 | 1:+4287398 | MsG0180000314.01.T01:CDS |
| GATGGCATCCCTAGCTTACT+TGG | 0.408280 | 1:-4287995 | None:intergenic |
| CTCTGCACCGTCGCTGGCGG+CGG | 0.409488 | 1:-4287335 | None:intergenic |
| GTCAATTATTAGAACTATGC+AGG | 0.417605 | 1:+4290634 | MsG0180000314.01.T01:CDS |
| CTCAAACTCTGCACCGTCGC+TGG | 0.421458 | 1:-4287341 | None:intergenic |
| TAATAATTGACAAAAGATCT+TGG | 0.427756 | 1:-4290622 | None:intergenic |
| ACCGTTGTTACCTTCTGAAT+CGG | 0.428192 | 1:+4286968 | MsG0180000314.01.T01:CDS |
| CTCAGTCGACGGAGCGGCAG+AGG | 0.428799 | 1:+4287183 | MsG0180000314.01.T01:CDS |
| GTGTACTCTGGTTCCCTCTC+AGG | 0.430024 | 1:+4289457 | MsG0180000314.01.T01:CDS |
| AGCTCGAGCGATTGTTGTTC+CGG | 0.438095 | 1:+4287784 | MsG0180000314.01.T01:CDS |
| AGTTTATCCGTTTCGTTTCA+GGG | 0.440821 | 1:+4287278 | MsG0180000314.01.T01:CDS |
| GGCGGTTTCGCTTTACTCAC+CGG | 0.446470 | 1:-4287317 | None:intergenic |
| GTTGTGATTTCGCCGGCCAC+CGG | 0.446740 | 1:-4287487 | None:intergenic |
| TGGTAGTTCTTCTGGAGTAC+AGG | 0.453379 | 1:+4287733 | MsG0180000314.01.T01:CDS |
| GGACGAACTGCAGAACGAAT+TGG | 0.453439 | 1:-4287965 | None:intergenic |
| CTTCGGTAACAGTAGGCATA+TGG | 0.462002 | 1:-4289741 | None:intergenic |
| CAAGGTACTCCTCGGCCTAA+TGG | 0.468202 | 1:+4287212 | MsG0180000314.01.T01:CDS |
| CAGCGACGGTGCAGAGTTTG+AGG | 0.469732 | 1:+4287342 | MsG0180000314.01.T01:CDS |
| GAAAAGCCTCTATGGTGCTT+GGG | 0.470233 | 1:+4288891 | MsG0180000314.01.T01:intron |
| GATAGATCTACTGAATTTGA+AGG | 0.470240 | 1:+4289673 | MsG0180000314.01.T01:intron |
| AGGAGCGACCGAAGCGCTAA+AGG | 0.473671 | 1:+4289477 | MsG0180000314.01.T01:CDS |
| AGAAAAGCCTCTATGGTGCT+TGG | 0.475511 | 1:+4288890 | MsG0180000314.01.T01:intron |
| CCTGCTTCTCCAAGTAAGCT+AGG | 0.476087 | 1:+4287986 | MsG0180000314.01.T01:CDS |
| GCCGGAACCTTCCTCCTCTC+CGG | 0.476363 | 1:-4287374 | None:intergenic |
| GGTGCTGGCCTTTAGCGCTT+CGG | 0.477110 | 1:-4289485 | None:intergenic |
| TTCAGCAATGGATGTGATGC+AGG | 0.485132 | 1:+4289706 | MsG0180000314.01.T01:CDS |
| TCTGGAGTACAGGAGTTTGG+AGG | 0.486148 | 1:+4287743 | MsG0180000314.01.T01:CDS |
| AACAGGAAGACGTAGGGTGC+TGG | 0.490737 | 1:-4289500 | None:intergenic |
| GATTTGGAAGCAATGTGGTT+AGG | 0.494423 | 1:+4287573 | MsG0180000314.01.T01:CDS |
| TCAGAAAATGTTGTTTACTT+CGG | 0.495807 | 1:+4287250 | MsG0180000314.01.T01:CDS |
| GCAACCGGAGTCTCACCATT+AGG | 0.495895 | 1:-4287227 | None:intergenic |
| AAGGACTCACACCGCGCGAA+GGG | 0.498493 | 1:-4288027 | None:intergenic |
| CGACGGAGCGGCAGAGGCAA+CGG | 0.498632 | 1:+4287189 | MsG0180000314.01.T01:CDS |
| AGATTGGGCTATTCTGGATC+GGG | 0.500099 | 1:+4289435 | MsG0180000314.01.T01:CDS |
| ACCGGAGAGGAGGAAGGTTC+CGG | 0.504389 | 1:+4287373 | MsG0180000314.01.T01:CDS |
| AAGATTGGGCTATTCTGGAT+CGG | 0.505653 | 1:+4289434 | MsG0180000314.01.T01:CDS |
| CAAGGACTCACACCGCGCGA+AGG | 0.509047 | 1:-4288028 | None:intergenic |
| TAGCAACACCGTTTCTTCCA+CGG | 0.514313 | 1:-4288051 | None:intergenic |
| AGTGGATCAGCACCGGTGGC+CGG | 0.514774 | 1:+4287475 | MsG0180000314.01.T01:CDS |
| CGCTTCGGTCGCTCCTGAGA+GGG | 0.515117 | 1:-4289470 | None:intergenic |
| ATTCTGGATCGGGTGTACTC+TGG | 0.516487 | 1:+4289445 | MsG0180000314.01.T01:CDS |
| CCTAGCTTACTTGGAGAAGC+AGG | 0.524697 | 1:-4287986 | None:intergenic |
| GGAGTACAGGAGTTTGGAGG+TGG | 0.529886 | 1:+4287746 | MsG0180000314.01.T01:CDS |
| AGCGAAACCGCCGCCAGCGA+CGG | 0.529951 | 1:+4287328 | MsG0180000314.01.T01:CDS |
| CGCGAAGGGGACCTCGGTGA+TGG | 0.530379 | 1:-4288013 | None:intergenic |
| TAATTTCATGAATAGAAGCT+TGG | 0.535304 | 1:+4287520 | MsG0180000314.01.T01:CDS |
| GGAGGCTATTTGTTCAGCAA+TGG | 0.537402 | 1:+4289694 | MsG0180000314.01.T01:CDS |
| AATTCAGTGTCTGCACAGAA+AGG | 0.541182 | 1:-4288240 | None:intergenic |
| GAGGAGGAAGGTTCCGGCGA+CGG | 0.543889 | 1:+4287379 | MsG0180000314.01.T01:CDS |
| GGTTGTAAATGTAAAGTCAC+TGG | 0.546346 | 1:+4290547 | MsG0180000314.01.T01:intron |
| GTCGGTGTTGTAACCGTCGC+CGG | 0.547586 | 1:-4287392 | None:intergenic |
| ATTCAGTGTCTGCACAGAAA+GGG | 0.550651 | 1:-4288239 | None:intergenic |
| ATTGCATAAGCCTGTTATGT+AGG | 0.553385 | 1:-4288186 | None:intergenic |
| ATTCCTCGTGGAGACGATGC+AGG | 0.554378 | 1:-4287917 | None:intergenic |
| GGTAACAACGGTGGCCTCGT+TGG | 0.555549 | 1:-4286957 | None:intergenic |
| ACTAATCCATCTTCGAGAAA+CGG | 0.557716 | 1:+4287827 | MsG0180000314.01.T01:CDS |
| CGATTCTCCCTGAAACGAAA+CGG | 0.558328 | 1:-4287285 | None:intergenic |
| GCCTCTTGCAAGAACCTCGC+CGG | 0.564762 | 1:-4287803 | None:intergenic |
| ACCGACGGCGTAACTGTCAC+CGG | 0.564809 | 1:-4287152 | None:intergenic |
| TGATTCTGTTGTGATTTCGC+CGG | 0.565036 | 1:-4287494 | None:intergenic |
| TCCGGCGAGGTTCTTGCAAG+AGG | 0.567321 | 1:+4287802 | MsG0180000314.01.T01:CDS |
| GCGCTTCGGTCGCTCCTGAG+AGG | 0.572968 | 1:-4289471 | None:intergenic |
| TATATACCTTCGGTAACAGT+AGG | 0.574204 | 1:-4289748 | None:intergenic |
| CTGCTTCTCCAAGTAAGCTA+GGG | 0.575742 | 1:+4287987 | MsG0180000314.01.T01:CDS |
| CGCGGTGTGAGTCCTTGCCG+TGG | 0.577170 | 1:+4288034 | MsG0180000314.01.T01:CDS |
| TTCGGCACCAAAAGCTTCGG+AGG | 0.579043 | 1:-4287875 | None:intergenic |
| GAAAAGAACTAACTCGCCAT+TGG | 0.584363 | 1:+4287088 | MsG0180000314.01.T01:CDS |
| AGTCCTTGCCGTGGAAGAAA+CGG | 0.584401 | 1:+4288043 | MsG0180000314.01.T01:CDS |
| GACTGAGATCGTTTCACCGA+CGG | 0.589591 | 1:-4287167 | None:intergenic |
| GTAACACTTTCATTATCAGA+AGG | 0.591803 | 1:-4287707 | None:intergenic |
| GGAAAAGTACACCGGAGAGG+AGG | 0.592441 | 1:+4287363 | MsG0180000314.01.T01:CDS |
| TACATAACAGGCTTATGCAA+TGG | 0.595217 | 1:+4288188 | MsG0180000314.01.T01:CDS |
| TAGGCATATGGAGGATGCCA+TGG | 0.595245 | 1:-4289729 | None:intergenic |
| TTCACCGTTCTATTCACCAA+TGG | 0.595880 | 1:-4287104 | None:intergenic |
| AAATTCGATTTCTAGGTCAG+TGG | 0.597586 | 1:+4287457 | MsG0180000314.01.T01:CDS |
| ATTGCATTGTCCGATTCAGA+AGG | 0.598126 | 1:-4286978 | None:intergenic |
| CTAGGTCAGTGGATCAGCAC+CGG | 0.601366 | 1:+4287468 | MsG0180000314.01.T01:CDS |
| AGGACTCACACCGCGCGAAG+GGG | 0.602977 | 1:-4288026 | None:intergenic |
| TAGCTACCCAAGCACCATAG+AGG | 0.603348 | 1:-4288897 | None:intergenic |
| GGTCAGTGGATCAGCACCGG+TGG | 0.608767 | 1:+4287471 | MsG0180000314.01.T01:CDS |
| AAGTACACCGGAGAGGAGGA+AGG | 0.611409 | 1:+4287367 | MsG0180000314.01.T01:CDS |
| CTCGCCATTGGTGAATAGAA+CGG | 0.612901 | 1:+4287100 | MsG0180000314.01.T01:CDS |
| GGAGTCTCACCATTAGGCCG+AGG | 0.613090 | 1:-4287221 | None:intergenic |
| TCGGCCTAATGGTGAGACTC+CGG | 0.614526 | 1:+4287223 | MsG0180000314.01.T01:CDS |
| TCATACTTGCTCATTCAGGA+TGG | 0.615410 | 1:-4288995 | None:intergenic |
| GGGGAAAATTGGAGAGAACA+GGG | 0.616709 | 1:+4288138 | MsG0180000314.01.T01:CDS |
| ACACCGTTTCTTCCACGGCA+AGG | 0.617821 | 1:-4288046 | None:intergenic |
| GAGCGATTGTTGTTCCGGCG+AGG | 0.619427 | 1:+4287789 | MsG0180000314.01.T01:CDS |
| AAACTCTGCACCGTCGCTGG+CGG | 0.621343 | 1:-4287338 | None:intergenic |
| ACACCGCGCGAAGGGGACCT+CGG | 0.621540 | 1:-4288019 | None:intergenic |
| ACAACACCGACAATTGGAAG+AGG | 0.623276 | 1:+4287404 | MsG0180000314.01.T01:CDS |
| ACGGCAAAACTCAAAACAGA+AGG | 0.630720 | 1:-4288103 | None:intergenic |
| AATGGATGTGATGCAGGCCA+TGG | 0.630875 | 1:+4289712 | MsG0180000314.01.T01:CDS |
| CGATTATTCAAAATTCCTCG+TGG | 0.631530 | 1:-4287929 | None:intergenic |
| ATCGCTCGAGCTGATCGTTG+CGG | 0.631817 | 1:-4287773 | None:intergenic |
| GGCAACGGCAAGGTACTCCT+CGG | 0.635107 | 1:+4287204 | MsG0180000314.01.T01:CDS |
| TGTGCAGACACTGAATTCTG+AGG | 0.635950 | 1:+4288246 | MsG0180000314.01.T01:CDS |
| ATTGGAAGAGGAAGAGTGAA+CGG | 0.637041 | 1:+4287416 | MsG0180000314.01.T01:CDS |
| GCCGGTGACAGTTACGCCGT+CGG | 0.640758 | 1:+4287151 | MsG0180000314.01.T01:CDS |
| TCACCGAGGTCCCCTTCGCG+CGG | 0.643495 | 1:+4288016 | MsG0180000314.01.T01:CDS |
| CGGTAACAGTAGGCATATGG+AGG | 0.643850 | 1:-4289738 | None:intergenic |
| AGTTGTCAGCATAAGTGCAA+AGG | 0.647548 | 1:+4290577 | MsG0180000314.01.T01:CDS |
| AGATCTACTGAATTTGAAGG+AGG | 0.651994 | 1:+4289676 | MsG0180000314.01.T01:CDS |
| GAGCGGCAGAGGCAACGGCA+AGG | 0.654833 | 1:+4287194 | MsG0180000314.01.T01:CDS |
| AATCCATCTTCGAGAAACGG+TGG | 0.655723 | 1:+4287830 | MsG0180000314.01.T01:CDS |
| ATGAATAGAAGCTTGGATTG+TGG | 0.664306 | 1:+4287527 | MsG0180000314.01.T01:CDS |
| GAGTTTGAGGAAAAGTACAC+CGG | 0.667037 | 1:+4287355 | MsG0180000314.01.T01:CDS |
| CATATGCCTACTGTTACCGA+AGG | 0.667961 | 1:+4289742 | MsG0180000314.01.T01:CDS |
| AACGATCTCAGTCGACGGAG+CGG | 0.670815 | 1:+4287177 | MsG0180000314.01.T01:CDS |
| GCAATGTGGTTAGGTCATTG+CGG | 0.674795 | 1:+4287582 | MsG0180000314.01.T01:CDS |
| AAATGTTGTTTACTTCGGCG+AGG | 0.676953 | 1:+4287255 | MsG0180000314.01.T01:CDS |
| GATCCTCGAGTTTCTCACGA+TGG | 0.678747 | 1:+4287617 | MsG0180000314.01.T01:CDS |
| GGTGAAACGATCTCAGTCGA+CGG | 0.679372 | 1:+4287172 | MsG0180000314.01.T01:CDS |
| TCCGATTCAGAAGGTAACAA+CGG | 0.679861 | 1:-4286969 | None:intergenic |
| GAATGGATTTGGAAGCAATG+TGG | 0.680388 | 1:+4287568 | MsG0180000314.01.T01:CDS |
| TGAGGAAAAGTACACCGGAG+AGG | 0.704881 | 1:+4287360 | MsG0180000314.01.T01:CDS |
| GCACCATCGTGAGAAACTCG+AGG | 0.706819 | 1:-4287620 | None:intergenic |
| TTGCCGTTGATGTTCCAAGG+GGG | 0.732369 | 1:+4288119 | MsG0180000314.01.T01:CDS |
| AGTCCTGCATCGTCTCCACG+AGG | 0.738290 | 1:+4287914 | MsG0180000314.01.T01:CDS |
| TTTGCCGTTGATGTTCCAAG+GGG | 0.738628 | 1:+4288118 | MsG0180000314.01.T01:CDS |
| GAGACAGAAATTGACGACGC+CGG | 0.740637 | 1:+4287133 | MsG0180000314.01.T01:CDS |
| AGCTAGGGATGCCATCACCG+AGG | 0.744783 | 1:+4288002 | MsG0180000314.01.T01:CDS |
| GATTCAGAAGGTAACAACGG+TGG | 0.747196 | 1:-4286966 | None:intergenic |
| AGAGAGCATCAACACCAACG+AGG | 0.758781 | 1:+4286943 | MsG0180000314.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTCATATTTTCATTTTA+TGG | + | Chr1:4290457-4290476 | MsG0180000314.01.T01:intron | 10.0% |
| !!! | TTTATTTATTTTTTGCTATT+TGG | + | Chr1:4288447-4288466 | MsG0180000314.01.T01:intron | 10.0% |
| !! | AAAAAAAATCAAGAAGATTA+CGG | - | Chr1:4290418-4290437 | None:intergenic | 15.0% |
| !!! | TCTTTTTCAAATTTCAAATT+TGG | + | Chr1:4288276-4288295 | MsG0180000314.01.T01:intron | 15.0% |
| !! | AAATAATGTCAACAATATCA+AGG | - | Chr1:4288620-4288639 | None:intergenic | 20.0% |
| !! | TAAGAAATAAAGCAATAAAC+AGG | - | Chr1:4289559-4289578 | None:intergenic | 20.0% |
| !! | TAAGTTATCAAACAAATCAT+TGG | + | Chr1:4290161-4290180 | MsG0180000314.01.T01:intron | 20.0% |
| !! | TAATAATTGACAAAAGATCT+TGG | - | Chr1:4290625-4290644 | None:intergenic | 20.0% |
| !! | TGACACAAATATCTAAATAA+TGG | - | Chr1:4289092-4289111 | None:intergenic | 20.0% |
| !! | TTACATTTACAACCTATAAA+TGG | - | Chr1:4290541-4290560 | None:intergenic | 20.0% |
| !! | TTATGCTATTAATATTCTAC+TGG | + | Chr1:4288488-4288507 | MsG0180000314.01.T01:intron | 20.0% |
| !!! | AGTTTTAATGGTTCATATAT+AGG | + | Chr1:4289973-4289992 | MsG0180000314.01.T01:intron | 20.0% |
| !!! | ATATGTTTTGTTTTCCATTT+TGG | + | Chr1:4288807-4288826 | MsG0180000314.01.T01:intron | 20.0% |
| !!! | GTTGACATTATTTAAAACTT+TGG | + | Chr1:4288627-4288646 | MsG0180000314.01.T01:intron | 20.0% |
| !!! | TAGGGTTTTATAATATGTTA+AGG | - | Chr1:4290271-4290290 | None:intergenic | 20.0% |
| !!! | TCTTAAAATATTTTCTGTGA+TGG | - | Chr1:4290137-4290156 | None:intergenic | 20.0% |
| ! | AAACAGAAAATTCGATTTCT+AGG | + | Chr1:4287450-4287469 | MsG0180000314.01.T01:CDS | 25.0% |
| ! | AAGAGAAAAGAAAAATACCT+TGG | - | Chr1:4289536-4289555 | None:intergenic | 25.0% |
| ! | AGCATGTATGAAAAAAGAAA+AGG | - | Chr1:4289302-4289321 | None:intergenic | 25.0% |
| ! | CTCAGTCAAAAAGATAAAAA+AGG | - | Chr1:4288730-4288749 | None:intergenic | 25.0% |
| ! | CTGATACAAGAAAGAATATT+AGG | - | Chr1:4288872-4288891 | None:intergenic | 25.0% |
| ! | GTGAAGATCAATTCATATAT+AGG | + | Chr1:4288762-4288781 | MsG0180000314.01.T01:intron | 25.0% |
| ! | TAATTTCATGAATAGAAGCT+TGG | + | Chr1:4287520-4287539 | MsG0180000314.01.T01:CDS | 25.0% |
| ! | TACACCACATATTTATTTAG+AGG | + | Chr1:4290374-4290393 | MsG0180000314.01.T01:intron | 25.0% |
| ! | TATTAATGTTGTGATTGCTT+GGG | + | Chr1:4288320-4288339 | MsG0180000314.01.T01:intron | 25.0% |
| ! | TATTAGCTATTAGCATATCT+GGG | + | Chr1:4289619-4289638 | MsG0180000314.01.T01:intron | 25.0% |
| ! | TTATTAATGTTGTGATTGCT+TGG | + | Chr1:4288319-4288338 | MsG0180000314.01.T01:intron | 25.0% |
| !! | AAAATATTTTCTGTGATGGT+GGG | - | Chr1:4290133-4290152 | None:intergenic | 25.0% |
| !! | AGGATAGTATGTATACATTT+TGG | - | Chr1:4289282-4289301 | None:intergenic | 25.0% |
| !! | ATTTAAAACTTTGGCTGTAT+TGG | + | Chr1:4288636-4288655 | MsG0180000314.01.T01:intron | 25.0% |
| !! | CAACTGTAACTTTATTCTTT+TGG | - | Chr1:4288950-4288969 | None:intergenic | 25.0% |
| !! | TAAAATATTTTCTGTGATGG+TGG | - | Chr1:4290134-4290153 | None:intergenic | 25.0% |
| !! | TCAGAAAATGTTGTTTACTT+CGG | + | Chr1:4287250-4287269 | MsG0180000314.01.T01:CDS | 25.0% |
| !! | TTTAAAACTTTGGCTGTATT+GGG | + | Chr1:4288637-4288656 | MsG0180000314.01.T01:intron | 25.0% |
| !! | TTTTACTCAGATGATCTATT+TGG | + | Chr1:4289411-4289430 | MsG0180000314.01.T01:intron | 25.0% |
| !!! | ACTCTTTGAAGTTGTATTTA+AGG | + | Chr1:4288521-4288540 | MsG0180000314.01.T01:intron | 25.0% |
| !!! | ATGCAGGTAAGTTTTATATT+CGG | + | Chr1:4290650-4290669 | MsG0180000314.01.T01:intron | 25.0% |
| !!! | TAAAAGCACAGAAGTTTTAA+TGG | + | Chr1:4289961-4289980 | MsG0180000314.01.T01:intron | 25.0% |
| AATCATTGGTGTGATACAAA+AGG | + | Chr1:4290175-4290194 | MsG0180000314.01.T01:intron | 30.0% | |
| ACCACATATTTATTTAGAGG+TGG | + | Chr1:4290377-4290396 | MsG0180000314.01.T01:intron | 30.0% | |
| ACCACCTCTAAATAAATATG+TGG | - | Chr1:4290381-4290400 | None:intergenic | 30.0% | |
| AGAAATGTTCTCTGCTAAAA+TGG | - | Chr1:4288424-4288443 | None:intergenic | 30.0% | |
| AGATCAGAAAGCAACAAAAA+TGG | + | Chr1:4287650-4287669 | MsG0180000314.01.T01:CDS | 30.0% | |
| AGATGATCTATTTGGAAGAT+TGG | + | Chr1:4289419-4289438 | MsG0180000314.01.T01:intron | 30.0% | |
| AGCTGTGTTAAGTATAGTTT+CGG | - | Chr1:4290309-4290328 | None:intergenic | 30.0% | |
| AGTTGTAGATAAGGTGAATA+TGG | + | Chr1:4289338-4289357 | MsG0180000314.01.T01:intron | 30.0% | |
| ATTAGCTATTAGCATATCTG+GGG | + | Chr1:4289620-4289639 | MsG0180000314.01.T01:intron | 30.0% | |
| CTATTAGCTATTAGCATATC+TGG | + | Chr1:4289618-4289637 | MsG0180000314.01.T01:intron | 30.0% | |
| GATAGATCTACTGAATTTGA+AGG | + | Chr1:4289673-4289692 | MsG0180000314.01.T01:intron | 30.0% | |
| GATGATCTATTTGGAAGATT+GGG | + | Chr1:4289420-4289439 | MsG0180000314.01.T01:intron | 30.0% | |
| GCAAAAGGATTATATACCTT+CGG | - | Chr1:4289761-4289780 | None:intergenic | 30.0% | |
| GTAACACTTTCATTATCAGA+AGG | - | Chr1:4287710-4287729 | None:intergenic | 30.0% | |
| GTACTTGTCTTGAATTTCAT+TGG | + | Chr1:4290696-4290715 | MsG0180000314.01.T01:intron | 30.0% | |
| GTCAATTATTAGAACTATGC+AGG | + | Chr1:4290634-4290653 | MsG0180000314.01.T01:CDS | 30.0% | |
| TGTCCATTTGTATCATTACT+GGG | + | Chr1:4289177-4289196 | MsG0180000314.01.T01:intron | 30.0% | |
| TTATATTTGTGACGAAGTGA+TGG | + | Chr1:4289811-4289830 | MsG0180000314.01.T01:intron | 30.0% | |
| TTCAAAGACTATTGAAAAGC+TGG | - | Chr1:4289857-4289876 | None:intergenic | 30.0% | |
| TTCATTGGATGATATTGTTG+TGG | + | Chr1:4290711-4290730 | MsG0180000314.01.T01:intron | 30.0% | |
| TTGTCCATTTGTATCATTAC+TGG | + | Chr1:4289176-4289195 | MsG0180000314.01.T01:intron | 30.0% | |
| TTTACTTGCAGTTGTAGATA+AGG | + | Chr1:4289329-4289348 | MsG0180000314.01.T01:intron | 30.0% | |
| TTTATGGATAACCAGCATTT+GGG | + | Chr1:4290473-4290492 | MsG0180000314.01.T01:intron | 30.0% | |
| ! | ATTTTGAATAATCGGTTGCA+AGG | + | Chr1:4287938-4287957 | MsG0180000314.01.T01:CDS | 30.0% |
| ! | CACGAGGAATTTTGAATAAT+CGG | + | Chr1:4287930-4287949 | MsG0180000314.01.T01:CDS | 30.0% |
| ! | TTGAGAAATTCGAATGGATT+TGG | + | Chr1:4287557-4287576 | MsG0180000314.01.T01:CDS | 30.0% |
| ! | TTTTATGGATAACCAGCATT+TGG | + | Chr1:4290472-4290491 | MsG0180000314.01.T01:intron | 30.0% |
| !! | GATAATGAAAGTGTTACTTC+TGG | + | Chr1:4287713-4287732 | MsG0180000314.01.T01:CDS | 30.0% |
| !! | GTTTTGTTGAGAAATTCGAA+TGG | + | Chr1:4287551-4287570 | MsG0180000314.01.T01:CDS | 30.0% |
| !! | TGAAAGCATTCTCCATTTAT+AGG | + | Chr1:4290526-4290545 | MsG0180000314.01.T01:intron | 30.0% |
| !! | TGCAGGTAAGTTTTATATTC+GGG | + | Chr1:4290651-4290670 | MsG0180000314.01.T01:intron | 30.0% |
| !!! | CTATCGAACACTGATTTTTT+CGG | - | Chr1:4287896-4287915 | None:intergenic | 30.0% |
| !!! | TCTTTTTTCATACATGCTTG+AGG | + | Chr1:4289304-4289323 | MsG0180000314.01.T01:intron | 30.0% |
| AAATTCAGCACATGTAGCTA+AGG | - | Chr1:4289022-4289041 | None:intergenic | 35.0% | |
| AACAATCATTCCATGGCATT+TGG | + | Chr1:4289130-4289149 | MsG0180000314.01.T01:intron | 35.0% | |
| AATTCTCTTGTCTTCTGTAC+TGG | + | Chr1:4290091-4290110 | MsG0180000314.01.T01:intron | 35.0% | |
| AATTGCTAAATCCCAAATGC+TGG | - | Chr1:4290487-4290506 | None:intergenic | 35.0% | |
| ACTAATCCATCTTCGAGAAA+CGG | + | Chr1:4287827-4287846 | MsG0180000314.01.T01:CDS | 35.0% | |
| AGATCTACTGAATTTGAAGG+AGG | + | Chr1:4289676-4289695 | MsG0180000314.01.T01:CDS | 35.0% | |
| AGTTTATCCGTTTCGTTTCA+GGG | + | Chr1:4287278-4287297 | MsG0180000314.01.T01:CDS | 35.0% | |
| ATAGAGCAACAATCATTCCA+TGG | + | Chr1:4289123-4289142 | MsG0180000314.01.T01:intron | 35.0% | |
| ATGAATAGAAGCTTGGATTG+TGG | + | Chr1:4287527-4287546 | MsG0180000314.01.T01:CDS | 35.0% | |
| ATTGCATAAGCCTGTTATGT+AGG | - | Chr1:4288189-4288208 | None:intergenic | 35.0% | |
| CAACATTCATTATGGCAGTA+TGG | - | Chr1:4289783-4289802 | None:intergenic | 35.0% | |
| CATACTGCCATAATGAATGT+TGG | + | Chr1:4289781-4289800 | MsG0180000314.01.T01:intron | 35.0% | |
| CGATTATTCAAAATTCCTCG+TGG | - | Chr1:4287932-4287951 | None:intergenic | 35.0% | |
| CTATCTGTAGCAAAATACAG+TGG | - | Chr1:4289658-4289677 | None:intergenic | 35.0% | |
| GAAGACAAGAGAATTTGAAG+TGG | - | Chr1:4290086-4290105 | None:intergenic | 35.0% | |
| GAATGATTGTTGCTCTATGA+AGG | - | Chr1:4289121-4289140 | None:intergenic | 35.0% | |
| GGTTGTAAATGTAAAGTCAC+TGG | + | Chr1:4290547-4290566 | MsG0180000314.01.T01:intron | 35.0% | |
| TACATAACAGGCTTATGCAA+TGG | + | Chr1:4288188-4288207 | MsG0180000314.01.T01:CDS | 35.0% | |
| TATATACCTTCGGTAACAGT+AGG | - | Chr1:4289751-4289770 | None:intergenic | 35.0% | |
| TCAGAAAGCAACAAAAATGG+TGG | + | Chr1:4287653-4287672 | MsG0180000314.01.T01:CDS | 35.0% | |
| TCGAGATCCAACATTCATTA+TGG | - | Chr1:4289791-4289810 | None:intergenic | 35.0% | |
| TGCAATTCTTAGTAGATGAC+AGG | - | Chr1:4290207-4290226 | None:intergenic | 35.0% | |
| TGTCAACAATATCAAGGACA+AGG | - | Chr1:4288614-4288633 | None:intergenic | 35.0% | |
| TTATCAGAAGGAACAAGTTC+AGG | - | Chr1:4287698-4287717 | None:intergenic | 35.0% | |
| TTGGGATTTCAAACTTAGCA+GGG | + | Chr1:4290344-4290363 | MsG0180000314.01.T01:intron | 35.0% | |
| TTGTATCAGAAAAGCCTCTA+TGG | + | Chr1:4288883-4288902 | MsG0180000314.01.T01:intron | 35.0% | |
| TTGTGGTAGAAAATCAACTG+AGG | + | Chr1:4289897-4289916 | MsG0180000314.01.T01:intron | 35.0% | |
| ! | AAATTCGATTTCTAGGTCAG+TGG | + | Chr1:4287457-4287476 | MsG0180000314.01.T01:CDS | 35.0% |
| ! | AACAACATTTTCTGAGCAAC+CGG | - | Chr1:4287245-4287264 | None:intergenic | 35.0% |
| ! | AGCATTTGGGATTTAGCAAT+TGG | + | Chr1:4290486-4290505 | MsG0180000314.01.T01:intron | 35.0% |
| ! | ATTTTGTGTTGAGTTTCGTG+TGG | + | Chr1:4288355-4288374 | MsG0180000314.01.T01:intron | 35.0% |
| ! | CGGATGAATCTAAAAGCATA+GGG | - | Chr1:4290289-4290308 | None:intergenic | 35.0% |
| ! | GTGGATTGTATGGATGTTAA+TGG | + | Chr1:4288374-4288393 | MsG0180000314.01.T01:intron | 35.0% |
| ! | TCGGATGAATCTAAAAGCAT+AGG | - | Chr1:4290290-4290309 | None:intergenic | 35.0% |
| ! | TTTGGGATTTCAAACTTAGC+AGG | + | Chr1:4290343-4290362 | MsG0180000314.01.T01:intron | 35.0% |
| !! | AATGGCGAGTTAGTTCTTTT+CGG | - | Chr1:4287089-4287108 | None:intergenic | 35.0% |
| !! | ATTAGCTTTGCTCATTTGTG+TGG | + | Chr1:4289203-4289222 | MsG0180000314.01.T01:intron | 35.0% |
| !! | CAATAGTCTTTGAAATTCCC+AGG | + | Chr1:4289863-4289882 | MsG0180000314.01.T01:intron | 35.0% |
| !!! | GCTTTTATTTTCTGCTTGCT+TGG | - | Chr1:4289948-4289967 | None:intergenic | 35.0% |
| !!! | TGTTTTCCATTTTGGTTGTC+TGG | + | Chr1:4288815-4288834 | MsG0180000314.01.T01:intron | 35.0% |
| AACCAACCAGACAACCAAAA+TGG | - | Chr1:4288824-4288843 | None:intergenic | 40.0% | |
| AAGATTGGGCTATTCTGGAT+CGG | + | Chr1:4289434-4289453 | MsG0180000314.01.T01:CDS | 40.0% | |
| AATTCAGTGTCTGCACAGAA+AGG | - | Chr1:4288243-4288262 | None:intergenic | 40.0% | |
| ACCAAAAACAGGAAGACGTA+GGG | - | Chr1:4289509-4289528 | None:intergenic | 40.0% | |
| ACCACAATCATAATCTAGCC+TGG | - | Chr1:4289884-4289903 | None:intergenic | 40.0% | |
| ACCGTTGTTACCTTCTGAAT+CGG | + | Chr1:4286968-4286987 | MsG0180000314.01.T01:CDS | 40.0% | |
| ACGGCAAAACTCAAAACAGA+AGG | - | Chr1:4288106-4288125 | None:intergenic | 40.0% | |
| ACTCTTCCTCTTCCAATTGT+CGG | - | Chr1:4287413-4287432 | None:intergenic | 40.0% | |
| AGGATCATACTTGCTCATTC+AGG | - | Chr1:4289002-4289021 | None:intergenic | 40.0% | |
| AGTTGTCAGCATAAGTGCAA+AGG | + | Chr1:4290577-4290596 | MsG0180000314.01.T01:CDS | 40.0% | |
| ATTCAGTGTCTGCACAGAAA+GGG | - | Chr1:4288242-4288261 | None:intergenic | 40.0% | |
| ATTGCATTGTCCGATTCAGA+AGG | - | Chr1:4286981-4287000 | None:intergenic | 40.0% | |
| ATTGGAAGAGGAAGAGTGAA+CGG | + | Chr1:4287416-4287435 | MsG0180000314.01.T01:CDS | 40.0% | |
| CATTATGGCAGTATGGCAAA+AGG | - | Chr1:4289776-4289795 | None:intergenic | 40.0% | |
| CATTGAGACTCCTACATAAC+AGG | + | Chr1:4288176-4288195 | MsG0180000314.01.T01:CDS | 40.0% | |
| CCACAATCATAATCTAGCCT+GGG | - | Chr1:4289883-4289902 | None:intergenic | 40.0% | |
| GAAAAGAACTAACTCGCCAT+TGG | + | Chr1:4287088-4287107 | MsG0180000314.01.T01:CDS | 40.0% | |
| GAAGTAACTTCTCGTGCTTT+CGG | - | Chr1:4287014-4287033 | None:intergenic | 40.0% | |
| GAGTTTATCCGTTTCGTTTC+AGG | + | Chr1:4287277-4287296 | MsG0180000314.01.T01:CDS | 40.0% | |
| GATTTGGAAGCAATGTGGTT+AGG | + | Chr1:4287573-4287592 | MsG0180000314.01.T01:CDS | 40.0% | |
| GTCATTGCGGAATTCGTTAT+TGG | + | Chr1:4287595-4287614 | MsG0180000314.01.T01:CDS | 40.0% | |
| GTGCCCAGTAATGATACAAA+TGG | - | Chr1:4289183-4289202 | None:intergenic | 40.0% | |
| GTTACTTCTGGTAGTTCTTC+TGG | + | Chr1:4287725-4287744 | MsG0180000314.01.T01:CDS | 40.0% | |
| GTTCTCTGATAGAGGTTACT+GGG | + | Chr1:4289230-4289249 | MsG0180000314.01.T01:intron | 40.0% | |
| TCATACTTGCTCATTCAGGA+TGG | - | Chr1:4288998-4289017 | None:intergenic | 40.0% | |
| TCCGATTCAGAAGGTAACAA+CGG | - | Chr1:4286972-4286991 | None:intergenic | 40.0% | |
| TGATTCTGTTGTGATTTCGC+CGG | - | Chr1:4287497-4287516 | None:intergenic | 40.0% | |
| TGTTCTCTGATAGAGGTTAC+TGG | + | Chr1:4289229-4289248 | MsG0180000314.01.T01:intron | 40.0% | |
| TTCACCGTTCTATTCACCAA+TGG | - | Chr1:4287107-4287126 | None:intergenic | 40.0% | |
| TTGGATGATATTGTTGTGGC+AGG | + | Chr1:4290715-4290734 | MsG0180000314.01.T01:intron | 40.0% | |
| TTTGGAAGATTGGGCTATTC+TGG | + | Chr1:4289429-4289448 | MsG0180000314.01.T01:CDS | 40.0% | |
| ! | AAATGTTGTTTACTTCGGCG+AGG | + | Chr1:4287255-4287274 | MsG0180000314.01.T01:CDS | 40.0% |
| ! | GAATGGATTTGGAAGCAATG+TGG | + | Chr1:4287568-4287587 | MsG0180000314.01.T01:CDS | 40.0% |
| ! | GAGTTTGAGGAAAAGTACAC+CGG | + | Chr1:4287355-4287374 | MsG0180000314.01.T01:CDS | 40.0% |
| ! | TGAGTTTCGTGTGGATTGTA+TGG | + | Chr1:4288364-4288383 | MsG0180000314.01.T01:intron | 40.0% |
| ! | TTTTGCCGTTGATGTTCCAA+GGG | + | Chr1:4288117-4288136 | MsG0180000314.01.T01:CDS | 40.0% |
| !! | TTTTTCGGCACCAAAAGCTT+CGG | - | Chr1:4287881-4287900 | None:intergenic | 40.0% |
| !!! | GTGGTTTTGTTCTCTGATAG+AGG | + | Chr1:4289222-4289241 | MsG0180000314.01.T01:intron | 40.0% |
| !!! | TTCCATTTTGGTTGTCTGGT+TGG | + | Chr1:4288819-4288838 | MsG0180000314.01.T01:intron | 40.0% |
| AATCCATCTTCGAGAAACGG+TGG | + | Chr1:4287830-4287849 | MsG0180000314.01.T01:CDS | 45.0% | |
| ACAACACCGACAATTGGAAG+AGG | + | Chr1:4287404-4287423 | MsG0180000314.01.T01:CDS | 45.0% | |
| ACGGTTACAACACCGACAAT+TGG | + | Chr1:4287398-4287417 | MsG0180000314.01.T01:CDS | 45.0% | |
| AGAAAAGCCTCTATGGTGCT+TGG | + | Chr1:4288890-4288909 | MsG0180000314.01.T01:intron | 45.0% | |
| AGATTGGGCTATTCTGGATC+GGG | + | Chr1:4289435-4289454 | MsG0180000314.01.T01:CDS | 45.0% | |
| AGCTTCTCATCGCTGTAGTT+TGG | + | Chr1:4290325-4290344 | MsG0180000314.01.T01:intron | 45.0% | |
| ATTCCACCGTTTCTCGAAGA+TGG | - | Chr1:4287836-4287855 | None:intergenic | 45.0% | |
| CACCAAAAACAGGAAGACGT+AGG | - | Chr1:4289510-4289529 | None:intergenic | 45.0% | |
| CATATGCCTACTGTTACCGA+AGG | + | Chr1:4289742-4289761 | MsG0180000314.01.T01:CDS | 45.0% | |
| CCCAGGCTAGATTATGATTG+TGG | + | Chr1:4289880-4289899 | MsG0180000314.01.T01:intron | 45.0% | |
| CGATTCTCCCTGAAACGAAA+CGG | - | Chr1:4287288-4287307 | None:intergenic | 45.0% | |
| CTACATGAAGCCAAATGCCA+TGG | - | Chr1:4289143-4289162 | None:intergenic | 45.0% | |
| CTCGCCATTGGTGAATAGAA+CGG | + | Chr1:4287100-4287119 | MsG0180000314.01.T01:CDS | 45.0% | |
| CTGCTTCTCCAAGTAAGCTA+GGG | + | Chr1:4287987-4288006 | MsG0180000314.01.T01:CDS | 45.0% | |
| CTTCGGTAACAGTAGGCATA+TGG | - | Chr1:4289744-4289763 | None:intergenic | 45.0% | |
| GAAAAGCCTCTATGGTGCTT+GGG | + | Chr1:4288891-4288910 | MsG0180000314.01.T01:intron | 45.0% | |
| GATGTTCCAAGGGGGAAAAT+TGG | + | Chr1:4288127-4288146 | MsG0180000314.01.T01:CDS | 45.0% | |
| GATTCAGAAGGTAACAACGG+TGG | - | Chr1:4286969-4286988 | None:intergenic | 45.0% | |
| GCAATGTGGTTAGGTCATTG+CGG | + | Chr1:4287582-4287601 | MsG0180000314.01.T01:CDS | 45.0% | |
| GCTTCTCATCGCTGTAGTTT+GGG | + | Chr1:4290326-4290345 | MsG0180000314.01.T01:intron | 45.0% | |
| GGAGGCTATTTGTTCAGCAA+TGG | + | Chr1:4289694-4289713 | MsG0180000314.01.T01:CDS | 45.0% | |
| GGGGAAAATTGGAGAGAACA+GGG | + | Chr1:4288138-4288157 | MsG0180000314.01.T01:CDS | 45.0% | |
| TAGCAACACCGTTTCTTCCA+CGG | - | Chr1:4288054-4288073 | None:intergenic | 45.0% | |
| TCTTCGAGAAACGGTGGAAT+TGG | + | Chr1:4287836-4287855 | MsG0180000314.01.T01:CDS | 45.0% | |
| TGTGCAGACACTGAATTCTG+AGG | + | Chr1:4288246-4288265 | MsG0180000314.01.T01:CDS | 45.0% | |
| TTCAGCAATGGATGTGATGC+AGG | + | Chr1:4289706-4289725 | MsG0180000314.01.T01:CDS | 45.0% | |
| TTTCCCCCTTGGAACATCAA+CGG | - | Chr1:4288125-4288144 | None:intergenic | 45.0% | |
| TTTGCCGTTGATGTTCCAAG+GGG | + | Chr1:4288118-4288137 | MsG0180000314.01.T01:CDS | 45.0% | |
| ! | AACAGTTCCTCCGAAGCTTT+TGG | + | Chr1:4287868-4287887 | MsG0180000314.01.T01:CDS | 45.0% |
| ! | ACCCTACGTCTTCCTGTTTT+TGG | + | Chr1:4289505-4289524 | MsG0180000314.01.T01:CDS | 45.0% |
| ! | GTTTTGCCGTTGATGTTCCA+AGG | + | Chr1:4288116-4288135 | MsG0180000314.01.T01:CDS | 45.0% |
| ! | TTCTCTCCAATTTTCCCCCT+TGG | - | Chr1:4288136-4288155 | None:intergenic | 45.0% |
| !! | CAAAAATGGTGGATCTGAGC+AGG | + | Chr1:4287664-4287683 | MsG0180000314.01.T01:CDS | 45.0% |
| !! | TCTTCTGGAGTACAGGAGTT+TGG | + | Chr1:4287740-4287759 | MsG0180000314.01.T01:CDS | 45.0% |
| !! | TGGTAGTTCTTCTGGAGTAC+AGG | + | Chr1:4287733-4287752 | MsG0180000314.01.T01:CDS | 45.0% |
| !!! | CTACGTCTTCCTGTTTTTGG+TGG | + | Chr1:4289508-4289527 | MsG0180000314.01.T01:CDS | 45.0% |
| !!! | TTTTTTTTTTTTTTATGATT+GGG | + | Chr1:4290433-4290452 | MsG0180000314.01.T01:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTATGAT+TGG | + | Chr1:4290432-4290451 | MsG0180000314.01.T01:intron | 5.0% |
| AATGGATGTGATGCAGGCCA+TGG | + | Chr1:4289712-4289731 | MsG0180000314.01.T01:CDS | 50.0% | |
| ACCTTGGCACCACCAAAAAC+AGG | - | Chr1:4289520-4289539 | None:intergenic | 50.0% | |
| AGTCCTTGCCGTGGAAGAAA+CGG | + | Chr1:4288043-4288062 | MsG0180000314.01.T01:CDS | 50.0% | |
| ATTCTGGATCGGGTGTACTC+TGG | + | Chr1:4289445-4289464 | MsG0180000314.01.T01:CDS | 50.0% | |
| CCTAGCTTACTTGGAGAAGC+AGG | - | Chr1:4287989-4288008 | None:intergenic | 50.0% | |
| CCTGCTTCTCCAAGTAAGCT+AGG | + | Chr1:4287986-4288005 | MsG0180000314.01.T01:CDS | 50.0% | |
| CGGTAACAGTAGGCATATGG+AGG | - | Chr1:4289741-4289760 | None:intergenic | 50.0% | |
| GACTGAGATCGTTTCACCGA+CGG | - | Chr1:4287170-4287189 | None:intergenic | 50.0% | |
| GAGACAGAAATTGACGACGC+CGG | + | Chr1:4287133-4287152 | MsG0180000314.01.T01:CDS | 50.0% | |
| GATCCTCGAGTTTCTCACGA+TGG | + | Chr1:4287617-4287636 | MsG0180000314.01.T01:CDS | 50.0% | |
| GATGGCATCCCTAGCTTACT+TGG | - | Chr1:4287998-4288017 | None:intergenic | 50.0% | |
| GGACGAACTGCAGAACGAAT+TGG | - | Chr1:4287968-4287987 | None:intergenic | 50.0% | |
| GGGGGAAAATTGGAGAGAAC+AGG | + | Chr1:4288137-4288156 | MsG0180000314.01.T01:CDS | 50.0% | |
| GGTGAAACGATCTCAGTCGA+CGG | + | Chr1:4287172-4287191 | MsG0180000314.01.T01:CDS | 50.0% | |
| TAGCTACCCAAGCACCATAG+AGG | - | Chr1:4288900-4288919 | None:intergenic | 50.0% | |
| TAGGCATATGGAGGATGCCA+TGG | - | Chr1:4289732-4289751 | None:intergenic | 50.0% | |
| TTGCCGTTGATGTTCCAAGG+GGG | + | Chr1:4288119-4288138 | MsG0180000314.01.T01:CDS | 50.0% | |
| ! | AGCTCGAGCGATTGTTGTTC+CGG | + | Chr1:4287784-4287803 | MsG0180000314.01.T01:CDS | 50.0% |
| ! | CTTCGTGTTTTTCGTCGTCG+TGG | - | Chr1:4286925-4286944 | None:intergenic | 50.0% |
| ! | GGGAGAATCGTTTTCGATGC+CGG | + | Chr1:4287298-4287317 | MsG0180000314.01.T01:CDS | 50.0% |
| ! | TCTGGAGTACAGGAGTTTGG+AGG | + | Chr1:4287743-4287762 | MsG0180000314.01.T01:CDS | 50.0% |
| ! | TGAGGAAAAGTACACCGGAG+AGG | + | Chr1:4287360-4287379 | MsG0180000314.01.T01:CDS | 50.0% |
| !! | AGAGAGCATCAACACCAACG+AGG | + | Chr1:4286943-4286962 | MsG0180000314.01.T01:CDS | 50.0% |
| !! | GGCGAGTTAGTTCTTTTCGG+CGG | - | Chr1:4287086-4287105 | None:intergenic | 50.0% |
| !!! | TCCTGTTTTTGGTGGTGCCA+AGG | + | Chr1:4289516-4289535 | MsG0180000314.01.T01:CDS | 50.0% |
| AACAGGAAGACGTAGGGTGC+TGG | - | Chr1:4289503-4289522 | None:intergenic | 55.0% | |
| AACGATCTCAGTCGACGGAG+CGG | + | Chr1:4287177-4287196 | MsG0180000314.01.T01:CDS | 55.0% | |
| AAGTACACCGGAGAGGAGGA+AGG | + | Chr1:4287367-4287386 | MsG0180000314.01.T01:CDS | 55.0% | |
| ACACCGTTTCTTCCACGGCA+AGG | - | Chr1:4288049-4288068 | None:intergenic | 55.0% | |
| ATCGCTCGAGCTGATCGTTG+CGG | - | Chr1:4287776-4287795 | None:intergenic | 55.0% | |
| ATTCCTCGTGGAGACGATGC+AGG | - | Chr1:4287920-4287939 | None:intergenic | 55.0% | |
| CTAGGTCAGTGGATCAGCAC+CGG | + | Chr1:4287468-4287487 | MsG0180000314.01.T01:CDS | 55.0% | |
| GCAACCGGAGTCTCACCATT+AGG | - | Chr1:4287230-4287249 | None:intergenic | 55.0% | |
| GCACCATCGTGAGAAACTCG+AGG | - | Chr1:4287623-4287642 | None:intergenic | 55.0% | |
| GGAGTACAGGAGTTTGGAGG+TGG | + | Chr1:4287746-4287765 | MsG0180000314.01.T01:CDS | 55.0% | |
| GGCGGTTTCGCTTTACTCAC+CGG | - | Chr1:4287320-4287339 | None:intergenic | 55.0% | |
| TCGGCCTAATGGTGAGACTC+CGG | + | Chr1:4287223-4287242 | MsG0180000314.01.T01:CDS | 55.0% | |
| TTCGGCACCAAAAGCTTCGG+AGG | - | Chr1:4287878-4287897 | None:intergenic | 55.0% | |
| ! | CAAGGTACTCCTCGGCCTAA+TGG | + | Chr1:4287212-4287231 | MsG0180000314.01.T01:CDS | 55.0% |
| ! | GGAAAAGTACACCGGAGAGG+AGG | + | Chr1:4287363-4287382 | MsG0180000314.01.T01:CDS | 55.0% |
| ! | GTGTACTCTGGTTCCCTCTC+AGG | + | Chr1:4289457-4289476 | MsG0180000314.01.T01:CDS | 55.0% |
| AAACTCTGCACCGTCGCTGG+CGG | - | Chr1:4287341-4287360 | None:intergenic | 60.0% | |
| AAGGACTCACACCGCGCGAA+GGG | - | Chr1:4288030-4288049 | None:intergenic | 60.0% | |
| ACCGACGGCGTAACTGTCAC+CGG | - | Chr1:4287155-4287174 | None:intergenic | 60.0% | |
| ACCGGAGAGGAGGAAGGTTC+CGG | + | Chr1:4287373-4287392 | MsG0180000314.01.T01:CDS | 60.0% | |
| AGCTAGGGATGCCATCACCG+AGG | + | Chr1:4288002-4288021 | MsG0180000314.01.T01:CDS | 60.0% | |
| AGTCCTGCATCGTCTCCACG+AGG | + | Chr1:4287914-4287933 | MsG0180000314.01.T01:CDS | 60.0% | |
| CAGCGACGGTGCAGAGTTTG+AGG | + | Chr1:4287342-4287361 | MsG0180000314.01.T01:CDS | 60.0% | |
| CTCAAACTCTGCACCGTCGC+TGG | - | Chr1:4287344-4287363 | None:intergenic | 60.0% | |
| GCCTCTTGCAAGAACCTCGC+CGG | - | Chr1:4287806-4287825 | None:intergenic | 60.0% | |
| GGAGTCTCACCATTAGGCCG+AGG | - | Chr1:4287224-4287243 | None:intergenic | 60.0% | |
| GGTAACAACGGTGGCCTCGT+TGG | - | Chr1:4286960-4286979 | None:intergenic | 60.0% | |
| GTTGTGATTTCGCCGGCCAC+CGG | - | Chr1:4287490-4287509 | None:intergenic | 60.0% | |
| TCCGGCGAGGTTCTTGCAAG+AGG | + | Chr1:4287802-4287821 | MsG0180000314.01.T01:CDS | 60.0% | |
| ! | AGGAGCGACCGAAGCGCTAA+AGG | + | Chr1:4289477-4289496 | MsG0180000314.01.T01:CDS | 60.0% |
| ! | GAGCGATTGTTGTTCCGGCG+AGG | + | Chr1:4287789-4287808 | MsG0180000314.01.T01:CDS | 60.0% |
| ! | GGCAACGGCAAGGTACTCCT+CGG | + | Chr1:4287204-4287223 | MsG0180000314.01.T01:CDS | 60.0% |
| !! | GGTGCTGGCCTTTAGCGCTT+CGG | - | Chr1:4289488-4289507 | None:intergenic | 60.0% |
| !! | GTCGGTGTTGTAACCGTCGC+CGG | - | Chr1:4287395-4287414 | None:intergenic | 60.0% |
| AGGACTCACACCGCGCGAAG+GGG | - | Chr1:4288029-4288048 | None:intergenic | 65.0% | |
| CAAGGACTCACACCGCGCGA+AGG | - | Chr1:4288031-4288050 | None:intergenic | 65.0% | |
| CGCTTCGGTCGCTCCTGAGA+GGG | - | Chr1:4289473-4289492 | None:intergenic | 65.0% | |
| GAGGAGGAAGGTTCCGGCGA+CGG | + | Chr1:4287379-4287398 | MsG0180000314.01.T01:CDS | 65.0% | |
| GCCGGAACCTTCCTCCTCTC+CGG | - | Chr1:4287377-4287396 | None:intergenic | 65.0% | |
| GCCGGTGACAGTTACGCCGT+CGG | + | Chr1:4287151-4287170 | MsG0180000314.01.T01:CDS | 65.0% | |
| ! | GGTCAGTGGATCAGCACCGG+TGG | + | Chr1:4287471-4287490 | MsG0180000314.01.T01:CDS | 65.0% |
| !! | AGTGGATCAGCACCGGTGGC+CGG | + | Chr1:4287475-4287494 | MsG0180000314.01.T01:CDS | 65.0% |
| ACACCGCGCGAAGGGGACCT+CGG | - | Chr1:4288022-4288041 | None:intergenic | 70.0% | |
| AGCGAAACCGCCGCCAGCGA+CGG | + | Chr1:4287328-4287347 | MsG0180000314.01.T01:CDS | 70.0% | |
| CGACGGAGCGGCAGAGGCAA+CGG | + | Chr1:4287189-4287208 | MsG0180000314.01.T01:CDS | 70.0% | |
| CGCGAAGGGGACCTCGGTGA+TGG | - | Chr1:4288016-4288035 | None:intergenic | 70.0% | |
| CGCGGTGTGAGTCCTTGCCG+TGG | + | Chr1:4288034-4288053 | MsG0180000314.01.T01:CDS | 70.0% | |
| CTCAGTCGACGGAGCGGCAG+AGG | + | Chr1:4287183-4287202 | MsG0180000314.01.T01:CDS | 70.0% | |
| GAGCGGCAGAGGCAACGGCA+AGG | + | Chr1:4287194-4287213 | MsG0180000314.01.T01:CDS | 70.0% | |
| GCGCTTCGGTCGCTCCTGAG+AGG | - | Chr1:4289474-4289493 | None:intergenic | 70.0% | |
| TCACCGAGGTCCCCTTCGCG+CGG | + | Chr1:4288016-4288035 | MsG0180000314.01.T01:CDS | 70.0% | |
| CTCTGCACCGTCGCTGGCGG+CGG | - | Chr1:4287338-4287357 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 4286900 | 4290742 | 4286900 | ID=MsG0180000314.01;Name=MsG0180000314.01 |
| Chr1 | mRNA | 4286900 | 4290742 | 4286900 | ID=MsG0180000314.01.T01;Parent=MsG0180000314.01;Name=MsG0180000314.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0.8|0.66|1|1|1|6|0|602 |
| Chr1 | exon | 4286900 | 4288267 | 4286900 | ID=MsG0180000314.01.T01:exon:5640;Parent=MsG0180000314.01.T01 |
| Chr1 | exon | 4288892 | 4289011 | 4288892 | ID=MsG0180000314.01.T01:exon:5639;Parent=MsG0180000314.01.T01 |
| Chr1 | exon | 4289421 | 4289537 | 4289421 | ID=MsG0180000314.01.T01:exon:5638;Parent=MsG0180000314.01.T01 |
| Chr1 | exon | 4289674 | 4289763 | 4289674 | ID=MsG0180000314.01.T01:exon:5637;Parent=MsG0180000314.01.T01 |
| Chr1 | exon | 4290548 | 4290655 | 4290548 | ID=MsG0180000314.01.T01:exon:5636;Parent=MsG0180000314.01.T01 |
| Chr1 | exon | 4290737 | 4290742 | 4290737 | ID=MsG0180000314.01.T01:exon:5635;Parent=MsG0180000314.01.T01 |
| Chr1 | CDS | 4286900 | 4288267 | 4286900 | ID=MsG0180000314.01.T01:cds;Parent=MsG0180000314.01.T01 |
| Chr1 | CDS | 4288892 | 4289011 | 4288892 | ID=MsG0180000314.01.T01:cds;Parent=MsG0180000314.01.T01 |
| Chr1 | CDS | 4289421 | 4289537 | 4289421 | ID=MsG0180000314.01.T01:cds;Parent=MsG0180000314.01.T01 |
| Chr1 | CDS | 4289674 | 4289763 | 4289674 | ID=MsG0180000314.01.T01:cds;Parent=MsG0180000314.01.T01 |
| Chr1 | CDS | 4290548 | 4290655 | 4290548 | ID=MsG0180000314.01.T01:cds;Parent=MsG0180000314.01.T01 |
| Chr1 | CDS | 4290737 | 4290742 | 4290737 | ID=MsG0180000314.01.T01:cds;Parent=MsG0180000314.01.T01 |
| Gene Sequence |
| Protein sequence |
