AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020783.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020783.01.T01 MTR_4g058740 98.235 170 3 0 79 248 40 209 9.74e-122 345
MsG0480020783.01.T01 MTR_2g094790 88.235 170 20 0 79 248 40 209 2.48e-110 316
MsG0480020783.01.T01 MTR_7g101290 89.697 165 17 0 79 243 41 205 6.42e-107 308
MsG0480020783.01.T01 MTR_0041s0100 89.697 165 17 0 79 243 41 205 6.42e-107 308
MsG0480020783.01.T01 MTR_1g064260 89.091 165 18 0 79 243 40 204 1.18e-106 307
MsG0480020783.01.T01 MTR_3g113710 75.706 177 36 1 79 248 42 218 4.87e-96 280
MsG0480020783.01.T01 MTR_1g064260 88.514 148 17 0 96 243 1 148 2.12e-94 274
MsG0480020783.01.T01 MTR_1g057020 76.970 165 38 0 79 243 36 200 2.02e-92 271
MsG0480020783.01.T01 MTR_3g113710 80.537 149 29 0 79 227 42 190 8.92e-88 260
MsG0480020783.01.T01 MTR_1g015830 67.403 181 58 1 68 247 24 204 7.48e-87 257
MsG0480020783.01.T01 MTR_1g015830 69.079 152 47 0 96 247 1 152 2.26e-75 226
MsG0480020783.01.T01 MTR_3g113710 74.126 143 30 1 113 248 10 152 1.19e-73 221
MsG0480020783.01.T01 MTR_1g024145 74.490 98 25 0 72 169 155 252 3.47e-46 155
MsG0480020783.01.T01 MTR_1g024850 80.000 40 8 0 79 118 44 83 5.75e-16 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020783.01.T01 AT2G28305 90.303 165 16 0 79 243 35 199 1.23e-109 315
MsG0480020783.01.T01 AT2G37210 86.982 169 22 0 79 247 41 209 3.83e-108 311
MsG0480020783.01.T01 AT3G53450 85.294 170 25 0 79 248 41 210 3.72e-106 306
MsG0480020783.01.T01 AT2G37210 75.648 193 23 1 79 247 41 233 3.94e-102 296
MsG0480020783.01.T01 AT2G28305 92.617 149 11 0 79 227 35 183 1.63e-99 288
MsG0480020783.01.T01 AT5G06300 80.000 165 33 0 79 243 36 200 1.78e-96 281
MsG0480020783.01.T01 AT5G03270 83.333 156 26 0 79 234 46 201 6.25e-92 269
MsG0480020783.01.T01 AT4G35190 74.405 168 43 0 79 246 36 203 1.49e-90 267
MsG0480020783.01.T01 AT2G35990 71.084 166 48 0 79 244 36 201 1.95e-88 261
MsG0480020783.01.T01 AT5G03270 83.444 151 25 0 79 229 46 196 8.68e-88 259
MsG0480020783.01.T01 AT4G35190 79.195 149 31 0 79 227 36 184 2.64e-85 253
MsG0480020783.01.T01 AT5G11950 68.047 169 54 0 79 247 37 205 8.61e-84 249
MsG0480020783.01.T01 AT5G11950 68.047 169 54 0 79 247 37 205 8.61e-84 249
MsG0480020783.01.T01 AT5G11950 68.047 169 54 0 79 247 37 205 8.61e-84 249
MsG0480020783.01.T01 AT2G35990 69.799 149 45 0 96 244 1 149 1.96e-77 231
MsG0480020783.01.T01 AT2G35990 69.799 149 45 0 96 244 1 149 1.96e-77 231
MsG0480020783.01.T01 AT5G11950 67.105 152 50 0 96 247 1 152 8.91e-74 222
MsG0480020783.01.T01 AT2G28305 92.381 105 8 0 79 183 35 139 3.41e-66 202
MsG0480020783.01.T01 AT5G26140 55.102 147 44 1 123 247 6 152 1.58e-47 155
MsG0480020783.01.T01 AT5G26140 55.039 129 36 1 137 243 1 129 5.30e-41 138
MsG0480020783.01.T01 AT5G26140 58.824 102 42 0 146 247 17 118 2.82e-37 128

Find 79 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAATATTGATTTGGTTTA+TGG 0.095929 4:+48231431 MsG0480020783.01.T01:CDS
CTTGTAATGGTTGCCGTTTC+TGG 0.098244 4:+48228206 None:intergenic
CGTTGTCATGGTTGTGTTTC+CGG 0.148741 4:+48228259 MsG0480020783.01.T01:CDS
ACTGGTCATGGTTGTGTTTC+TGG 0.197131 4:+48229306 MsG0480020783.01.T01:CDS
ACAATTATATGACGAGCTTT+AGG 0.212084 4:-48236020 None:intergenic
CAATTATATGACGAGCTTTA+GGG 0.317659 4:-48236019 None:intergenic
GTATGAGTAGTTTAAGAGTT+TGG 0.320271 4:+48236842 MsG0480020783.01.T01:three_prime_UTR
TCTAAGCAAAGTTGGGAAAC+TGG 0.328148 4:+48236567 MsG0480020783.01.T01:CDS
TCCAGGCTCTATAAAATTCC+TGG 0.329521 4:+48229276 MsG0480020783.01.T01:intron
ATGTACGTACCTCCATCTTT+TGG 0.339963 4:-48236070 None:intergenic
GGTGTCAAGAAATATTGATT+TGG 0.365193 4:+48231424 MsG0480020783.01.T01:intron
AGGAGGCAGCATTGGTTTGA+TGG 0.380464 4:+48231454 MsG0480020783.01.T01:CDS
GTAGTTTAAGAGTTTGGTAC+TGG 0.382374 4:+48236848 MsG0480020783.01.T01:three_prime_UTR
CAGCATTGGTTTGATGGGGT+TGG 0.384600 4:+48231460 MsG0480020783.01.T01:CDS
GGAGGCAGCATTGGTTTGAT+GGG 0.391809 4:+48231455 MsG0480020783.01.T01:CDS
GCCGTTATCGTTGTTGTCTT+CGG 0.397870 4:+48229366 MsG0480020783.01.T01:CDS
GTTTCTCAAGCTGTTTATGA+TGG 0.421989 4:+48231482 MsG0480020783.01.T01:CDS
CGTTGTCGTCGTCGTTGTCA+TGG 0.431264 4:+48228291 MsG0480020783.01.T01:CDS
CATCATAAAATTACCTCTCT+TGG 0.431675 4:-48231651 None:intergenic
TCTCTTGGCATCAGTGTCCT+TGG 0.437369 4:-48231636 None:intergenic
CCTGGCTTCGCCACTGGTCA+TGG 0.441472 4:+48229294 MsG0480020783.01.T01:CDS
TATATGCATGAAGGTGGCTA+TGG 0.441783 4:+48235757 MsG0480020783.01.T01:intron
GTTTATGGAGGAGGCAGCAT+TGG 0.458836 4:+48231446 MsG0480020783.01.T01:CDS
GGAAACTTACTGGTTTATCA+TGG 0.459986 4:-48235828 None:intergenic
GATGCAACTCTTTCATGTTG+TGG 0.462188 4:-48236546 None:intergenic
GATGACAACGACGGAAAAGA+TGG 0.475351 4:-48229394 None:intergenic
AAAATTCCTGGCTTCGCCAC+TGG 0.475731 4:+48229288 MsG0480020783.01.T01:CDS
CTAAGCAAAGTTGGGAAACT+GGG 0.478869 4:+48236568 MsG0480020783.01.T01:CDS
GTGGGATTGTTGAATGTAGA+TGG 0.481596 4:+48235939 MsG0480020783.01.T01:CDS
AGCTTCTTGAGGTCATAACT+TGG 0.481664 4:+48235791 MsG0480020783.01.T01:CDS
GATGGAGGTCGACATGTGAT+TGG 0.485208 4:+48231500 MsG0480020783.01.T01:CDS
ATTGATTTGGTTTATGGAGG+AGG 0.486097 4:+48231437 MsG0480020783.01.T01:CDS
AAAGTTGGCCTCGCCAGAAA+CGG 0.490241 4:-48228219 None:intergenic
AAGTTGGGAAACTGGGAAGC+TGG 0.495777 4:+48236575 MsG0480020783.01.T01:CDS
AGTTGCATCTAAGCAAAGTT+GGG 0.497061 4:+48236560 MsG0480020783.01.T01:CDS
GTTGACGACAGCGGCAAAGT+TGG 0.497129 4:-48228234 None:intergenic
AATAAAAGCATCAGAATGCT+TGG 0.500098 4:-48233448 None:intergenic
GAATGGGAACCAACCTGGTA+AGG 0.500409 4:-48233472 None:intergenic
GGAGAAGTGAAGGCAGTAGC+AGG 0.500561 4:+48233399 MsG0480020783.01.T01:CDS
AGTGGGTTTGTGCAGATCAC+TGG 0.500630 4:+48233366 MsG0480020783.01.T01:intron
GACGACAACGTTGGCCTCGC+CGG 0.503108 4:-48228278 None:intergenic
TAGTTTAAGAGTTTGGTACT+GGG 0.505412 4:+48236849 MsG0480020783.01.T01:three_prime_UTR
GTCATAACTTGGGCTCAACT+TGG 0.508031 4:+48235802 MsG0480020783.01.T01:CDS
AATATTGATTTGGTTTATGG+AGG 0.510397 4:+48231434 MsG0480020783.01.T01:CDS
AGTTTAAGAGTTTGGTACTG+GGG 0.511599 4:+48236850 MsG0480020783.01.T01:three_prime_UTR
GTTTAAGAGTTTGGTACTGG+GGG 0.514645 4:+48236851 MsG0480020783.01.T01:three_prime_UTR
CCATGACCAGTGGCGAAGCC+AGG 0.516677 4:-48229294 None:intergenic
AAAAGAGCTTGTCCAAAAGA+TGG 0.518338 4:+48236058 MsG0480020783.01.T01:CDS
GAGTTGCATCTAAGCAAAGT+TGG 0.520245 4:+48236559 MsG0480020783.01.T01:CDS
TGTCGTCAACGTCGTTGTCA+TGG 0.523894 4:+48228247 MsG0480020783.01.T01:CDS
GAGGCAGCATTGGTTTGATG+GGG 0.537940 4:+48231456 MsG0480020783.01.T01:CDS
TCATGGTTGTGTTTCTGGCA+AGG 0.540109 4:+48229311 MsG0480020783.01.T01:CDS
ATTGACAAAGCTGTGGAGGA+AGG 0.543403 4:+48235987 MsG0480020783.01.T01:CDS
AGAGACAGTGGGAGAAGTGA+AGG 0.543939 4:+48233389 MsG0480020783.01.T01:CDS
AATGGTTGCCGTTTCTGGCG+AGG 0.549678 4:+48228211 None:intergenic
TCTCAAGCTGTTTATGATGG+AGG 0.551173 4:+48231485 MsG0480020783.01.T01:CDS
GCCGAAGACAACAACGATAA+CGG 0.554216 4:-48229367 None:intergenic
GCATCAAAGAAAAGCTGAGA+TGG 0.557994 4:+48233425 MsG0480020783.01.T01:CDS
GACACTTGAGGAGCTTCTTG+AGG 0.558323 4:+48235780 MsG0480020783.01.T01:CDS
ATGGAGGTCGACATGTGATT+GGG 0.564949 4:+48231501 MsG0480020783.01.T01:CDS
ATCTTTCATTGACAAAGCTG+TGG 0.565707 4:+48235980 MsG0480020783.01.T01:CDS
CATTGTGACATCTCAAGTTG+TGG 0.575431 4:+48236609 MsG0480020783.01.T01:three_prime_UTR
GCTTCTTGAGGTCATAACTT+GGG 0.575878 4:+48235792 MsG0480020783.01.T01:CDS
ATATGCATGAAGGTGGCTAT+GGG 0.577892 4:+48235758 MsG0480020783.01.T01:intron
TTTCATTGACAAAGCTGTGG+AGG 0.587801 4:+48235983 MsG0480020783.01.T01:CDS
TCATGGTTGTGTTTCCGGCG+AGG 0.589080 4:+48228264 MsG0480020783.01.T01:CDS
TAAGAAAGAATTATAGCTTG+AGG 0.597491 4:-48236679 None:intergenic
CAGATCACTGGAGAGACAGT+GGG 0.608222 4:+48233378 MsG0480020783.01.T01:intron
ACTTGAGATGTCACAATGTG+AGG 0.626989 4:-48236604 None:intergenic
GAGAACAACGATGACAACGA+CGG 0.629671 4:-48229403 None:intergenic
GCAGATCACTGGAGAGACAG+TGG 0.632705 4:+48233377 MsG0480020783.01.T01:intron
GGAAGAGATGATGACGACGA+CGG 0.633570 4:-48229343 None:intergenic
GACAACGACGACGACAACGT+TGG 0.644485 4:-48228287 None:intergenic
AAGGACACTGATGCCAAGAG+AGG 0.647568 4:+48231638 MsG0480020783.01.T01:CDS
AGGTGGCTATGGGACACTTG+AGG 0.653214 4:+48235768 MsG0480020783.01.T01:intron
AGAGCTTGTCCAAAAGATGG+AGG 0.667572 4:+48236061 MsG0480020783.01.T01:CDS
GACAACGACGTTGACGACAG+CGG 0.693419 4:-48228243 None:intergenic
AGAAACACAACCATGACCAG+TGG 0.701471 4:-48229304 None:intergenic
GAAGACAACAACGATAACGG+CGG 0.709963 4:-48229364 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATAATCAATATCAT+CGG + Chr4:48228701-48228720 MsG0480020783.01.T01:intron 10.0%
!! AATTAAAAATAAAAACAATG+AGG - Chr4:48233063-48233082 None:intergenic 10.0%
!! CAAAATAAATAAAAACAATA+AGG - Chr4:48231997-48232016 None:intergenic 10.0%
!! CCAAAAAATAATTATTTAAA+TGG - Chr4:48235324-48235343 None:intergenic 10.0%
!! TAAAAAACATAAAAAAGTTA+AGG + Chr4:48235611-48235630 MsG0480020783.01.T01:intron 10.0%
!! TAAAAAACATAAAAAAGTTA+AGG - Chr4:48235630-48235611 None:intergenic 10.0%
!!! AAAAAAAATTACTACAATTT+TGG + Chr4:48234679-48234698 MsG0480020783.01.T01:intron 10.0%
!!! AGCTTTTTTTTTTTTTTTTT+TGG + Chr4:48236708-48236727 MsG0480020783.01.T01:three_prime_UTR 10.0%
!!! ATAATCTATAAATTGAATTT+TGG + Chr4:48235905-48235924 MsG0480020783.01.T01:intron 10.0%
!!! ATATTTAGACATATTATTTT+TGG + Chr4:48234369-48234388 MsG0480020783.01.T01:intron 10.0%
!!! ATCTTTTATTTTTAAATTGT+TGG + Chr4:48234094-48234113 MsG0480020783.01.T01:intron 10.0%
!!! CCATTTAAATAATTATTTTT+TGG + Chr4:48235321-48235340 MsG0480020783.01.T01:intron 10.0%
!!! CTTATTGTTTTTATTTATTT+TGG + Chr4:48231995-48232014 MsG0480020783.01.T01:intron 10.0%
!!! GTTTAACTTTTTAATAAAAA+TGG - Chr4:48235867-48235886 None:intergenic 10.0%
!!! GTTTTTTAAAATAAAAACTA+AGG + Chr4:48235454-48235473 MsG0480020783.01.T01:intron 10.0%
!!! GTTTTTTAAAATAAAAACTA+AGG - Chr4:48235473-48235454 None:intergenic 10.0%
!!! TAGTTTTAAAAGTAATATTT+TGG + Chr4:48233723-48233742 MsG0480020783.01.T01:intron 10.0%
!!! TTAAAAATGTTTTCAATATA+TGG + Chr4:48236284-48236303 MsG0480020783.01.T01:intron 10.0%
!!! TTGTTTTATAACTATATTAT+TGG + Chr4:48231091-48231110 MsG0480020783.01.T01:intron 10.0%
!!! TTTAATTTTCTTTTTTTTGA+AGG + Chr4:48230345-48230364 MsG0480020783.01.T01:intron 10.0%
!!! TTTTTTTTTGTTATAAAAGA+GGG + Chr4:48234458-48234477 MsG0480020783.01.T01:intron 10.0%
!!! TTTTTTTTTTGTTATAAAAG+AGG + Chr4:48234457-48234476 MsG0480020783.01.T01:intron 10.0%
!! AAACTAACAAATAGATAATA+AGG - Chr4:48233709-48233728 None:intergenic 15.0%
!! AATAGATAATAAGGATAATT+TGG - Chr4:48233700-48233719 None:intergenic 15.0%
!! AATTATTAAAAGAAAGAGAA+TGG + Chr4:48233666-48233685 MsG0480020783.01.T01:intron 15.0%
!! ACATCTAATCATATATATTA+AGG + Chr4:48229650-48229669 MsG0480020783.01.T01:intron 15.0%
!! ATTCAAACTAATAAAACAAA+CGG - Chr4:48234735-48234754 None:intergenic 15.0%
!! ATTTATGGTAACAAAATTTA+TGG + Chr4:48228892-48228911 MsG0480020783.01.T01:intron 15.0%
!! CAAAACAATCTATATATAAT+TGG + Chr4:48232985-48233004 MsG0480020783.01.T01:intron 15.0%
!! GTCATAAATTGAAATAAAAT+AGG - Chr4:48229212-48229231 None:intergenic 15.0%
!! TAATTTGACTAAGTATAAAA+GGG - Chr4:48230657-48230676 None:intergenic 15.0%
!! TATGAATTAGTAGAAAAATA+TGG - Chr4:48233575-48233594 None:intergenic 15.0%
!!! AAAAATGCGTTAAAATATTT+TGG + Chr4:48235072-48235091 MsG0480020783.01.T01:intron 15.0%
!!! AAAATATTTTAACGCATTTT+TGG - Chr4:48235073-48235092 None:intergenic 15.0%
!!! AAATTTTTGCTTATAATAAC+CGG - Chr4:48234816-48234835 None:intergenic 15.0%
!!! AATAAAGAAATGTTTTTACT+TGG + Chr4:48234651-48234670 MsG0480020783.01.T01:intron 15.0%
!!! ATTGATTAAACTAATTTTAG+TGG - Chr4:48228674-48228693 None:intergenic 15.0%
!!! TATAAATTGAATTTTGGTTT+TGG + Chr4:48235911-48235930 MsG0480020783.01.T01:intron 15.0%
!!! TGTTAATTAAATCCTTTTTT+GGG + Chr4:48231379-48231398 MsG0480020783.01.T01:intron 15.0%
!!! TTAACATTTAATGTTTTGTT+TGG + Chr4:48230369-48230388 MsG0480020783.01.T01:intron 15.0%
!!! TTACAATAACTGTATTATTT+TGG - Chr4:48232776-48232795 None:intergenic 15.0%
!!! TTAGAATTTTGATTTACATT+GGG - Chr4:48234490-48234509 None:intergenic 15.0%
!!! TTGTAATTTGTGTAATAATT+TGG + Chr4:48233325-48233344 MsG0480020783.01.T01:intron 15.0%
!!! TTGTTAATTAAATCCTTTTT+TGG + Chr4:48231378-48231397 MsG0480020783.01.T01:intron 15.0%
!!! TTTTTACAAGCAATTTTTTA+GGG - Chr4:48231342-48231361 None:intergenic 15.0%
!!! TTTTTGAATTTCTTTTTCTT+TGG + Chr4:48232905-48232924 MsG0480020783.01.T01:intron 15.0%
!! AAAAAATGAATAGATGTTAG+AGG + Chr4:48236810-48236829 MsG0480020783.01.T01:three_prime_UTR 20.0%
!! AAAAAGATGATACATAGAAT+TGG - Chr4:48232369-48232388 None:intergenic 20.0%
!! AAAAGAAAAGAAAGAAAAAC+GGG - Chr4:48229480-48229499 None:intergenic 20.0%
!! AATAATGTATATTGTCAACT+AGG - Chr4:48233535-48233554 None:intergenic 20.0%
!! ACACAAATATAAAAAGAGAA+TGG - Chr4:48232436-48232455 None:intergenic 20.0%
!! ACAGTTATTGTAATTGTAAT+CGG + Chr4:48232783-48232802 MsG0480020783.01.T01:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + Chr4:48233786-48233805 MsG0480020783.01.T01:intron 20.0%
!! AGTTATTCAAAAATTGATGT+CGG + Chr4:48235273-48235292 MsG0480020783.01.T01:intron 20.0%
!! ATCTACATATACAACTAAAA+AGG + Chr4:48235390-48235409 MsG0480020783.01.T01:intron 20.0%
!! ATTAATATTCCCCATATTAT+TGG - Chr4:48232698-48232717 None:intergenic 20.0%
!! CTAATTTGACTAAGTATAAA+AGG - Chr4:48230658-48230677 None:intergenic 20.0%
!! GAAAAAAAAATGTATTTGAG+AGG - Chr4:48231193-48231212 None:intergenic 20.0%
!! GAAAAGAAAAGAAAGAAAAA+CGG - Chr4:48229481-48229500 None:intergenic 20.0%
!! GAATGGAAAATCAATATATT+TGG - Chr4:48232419-48232438 None:intergenic 20.0%
!! GATTTGATATCTCTTAAATA+TGG + Chr4:48236260-48236279 MsG0480020783.01.T01:intron 20.0%
!! TAAAAATCGTAGCATTAAAA+TGG - Chr4:48236163-48236182 None:intergenic 20.0%
!! TAAGGAAAAATACAAATCAA+CGG - Chr4:48235424-48235443 None:intergenic 20.0%
!! TATTATACCCATTAAAAACT+TGG + Chr4:48232060-48232079 MsG0480020783.01.T01:intron 20.0%
!! TTGACAAAAGAATCTAAAAA+AGG - Chr4:48232633-48232652 None:intergenic 20.0%
!!! AAATGGTTTGTATATATAGA+GGG - Chr4:48230729-48230748 None:intergenic 20.0%
!!! AAATTATTTCAAGTTCTCAA+CGG + Chr4:48235553-48235572 MsG0480020783.01.T01:intron 20.0%
!!! AAATTATTTCAAGTTCTCAA+CGG - Chr4:48235572-48235553 None:intergenic 20.0%
!!! ACATCAAGTATTTAAAACAT+GGG + Chr4:48233168-48233187 MsG0480020783.01.T01:intron 20.0%
!!! AGAAATATTGATTTGGTTTA+TGG + Chr4:48231431-48231450 MsG0480020783.01.T01:CDS 20.0%
!!! AGACCATTTTAAAAACATTA+TGG + Chr4:48228539-48228558 MsG0480020783.01.T01:intron 20.0%
!!! AGTCCATAATGTTTTTAAAA+TGG - Chr4:48228545-48228564 None:intergenic 20.0%
!!! ATGTGAATTATTGTTTTTTC+AGG + Chr4:48236768-48236787 MsG0480020783.01.T01:three_prime_UTR 20.0%
!!! ATTGTTTTGATGTCTTAAAA+AGG + Chr4:48231403-48231422 MsG0480020783.01.T01:intron 20.0%
!!! ATTTTAGTTAATGCTGATTT+TGG + Chr4:48236342-48236361 MsG0480020783.01.T01:intron 20.0%
!!! CTTAGAATTTTGATTTACAT+TGG - Chr4:48234491-48234510 None:intergenic 20.0%
!!! CTTTTTACAAGCAATTTTTT+AGG - Chr4:48231343-48231362 None:intergenic 20.0%
!!! GTTTGTTTTCTACTTTAATA+TGG - Chr4:48229801-48229820 None:intergenic 20.0%
!!! TAAATGGTTTGTATATATAG+AGG - Chr4:48230730-48230749 None:intergenic 20.0%
!!! TCATTTTGTAGACATTAAAT+TGG - Chr4:48231274-48231293 None:intergenic 20.0%
!!! TCTAACATCTATTCATTTTT+TGG - Chr4:48236811-48236830 None:intergenic 20.0%
!!! TCTTCAACACTTTTATTTTT+TGG - Chr4:48230807-48230826 None:intergenic 20.0%
!!! TGAAAACAATTATTTCTCAT+GGG - Chr4:48228981-48229000 None:intergenic 20.0%
!!! TTAAAGTCCAAGTTTTTAAT+GGG - Chr4:48232070-48232089 None:intergenic 20.0%
!!! TTCATTGCTCATTTAATTTA+TGG + Chr4:48228877-48228896 MsG0480020783.01.T01:intron 20.0%
!!! TTGAAAACAATTATTTCTCA+TGG - Chr4:48228982-48229001 None:intergenic 20.0%
!!! TTTATTTTGATGTCACATTT+TGG + Chr4:48232507-48232526 MsG0480020783.01.T01:intron 20.0%
!!! TTTGATAATTTTTTCTCCTA+TGG - Chr4:48231709-48231728 None:intergenic 20.0%
!!! TTTTTAGTTGTATATGTAGA+TGG - Chr4:48235391-48235410 None:intergenic 20.0%
!!! TTTTTGGTATGTTTTTACTT+CGG + Chr4:48234385-48234404 MsG0480020783.01.T01:intron 20.0%
!!! TTTTTTTTTTTTGGTTAGTG+TGG + Chr4:48236717-48236736 MsG0480020783.01.T01:three_prime_UTR 20.0%
! AAAAAATTACCAAAGGTTTG+AGG + Chr4:48234703-48234722 MsG0480020783.01.T01:intron 25.0%
! AAAATAAGATCGATCCAAAT+GGG - Chr4:48234132-48234151 None:intergenic 25.0%
! AAACAAATTGAATCATGACT+AGG + Chr4:48233124-48233143 MsG0480020783.01.T01:intron 25.0%
! AATAAAAATGGCAAGATTGA+GGG - Chr4:48235855-48235874 None:intergenic 25.0%
! ACAAAACGTAGTTAATTCTA+AGG + Chr4:48228516-48228535 MsG0480020783.01.T01:intron 25.0%
! ACAAAATTTATGGCAAAAGT+TGG + Chr4:48228902-48228921 MsG0480020783.01.T01:intron 25.0%
! ATACAACTAAAAAGGATACA+TGG + Chr4:48235398-48235417 MsG0480020783.01.T01:intron 25.0%
! ATATTTGGATAACAAAAGCA+AGG - Chr4:48232404-48232423 None:intergenic 25.0%
! ATCAAAACAATACCCAAAAA+AGG - Chr4:48231394-48231413 None:intergenic 25.0%
! ATGCAAAAATAGTAATGATG+AGG - Chr4:48233273-48233292 None:intergenic 25.0%
! CAAAGATAAAACATATGCAT+TGG + Chr4:48233972-48233991 MsG0480020783.01.T01:intron 25.0%
! CATTCATTAAATGATGTATG+TGG - Chr4:48234888-48234907 None:intergenic 25.0%
! GAATAGAAGAAATAAAGAGA+TGG + Chr4:48229975-48229994 MsG0480020783.01.T01:intron 25.0%
! GTCTATAATACAGTTTCATA+GGG - Chr4:48229605-48229624 None:intergenic 25.0%
! GTGTGCTAAATAAAATTAAG+AGG - Chr4:48229126-48229145 None:intergenic 25.0%
! TAAAATAAGATCGATCCAAA+TGG - Chr4:48234133-48234152 None:intergenic 25.0%
! TAAGAAAGAATTATAGCTTG+AGG - Chr4:48236682-48236701 None:intergenic 25.0%
! TAATAAAAATGGCAAGATTG+AGG - Chr4:48235856-48235875 None:intergenic 25.0%
! TATATTTGTGTGATTCATGT+AGG + Chr4:48232445-48232464 MsG0480020783.01.T01:intron 25.0%
! TGAAAGAATCAAAGTTTAAG+AGG + Chr4:48230013-48230032 MsG0480020783.01.T01:intron 25.0%
! TGCAAAAATAGTAATGATGA+GGG - Chr4:48233272-48233291 None:intergenic 25.0%
! TGTGACTAAAATCAATTTCT+TGG + Chr4:48229545-48229564 MsG0480020783.01.T01:intron 25.0%
! TGTTAAATTTCCAAGAAGAA+TGG - Chr4:48230325-48230344 None:intergenic 25.0%
! TTCCACATTTCTCTATATAT+AGG + Chr4:48229914-48229933 MsG0480020783.01.T01:intron 25.0%
! TTGTATCTTAGAATTTAGAC+CGG + Chr4:48230163-48230182 MsG0480020783.01.T01:intron 25.0%
! TTTATGATGTTTGGATTTGA+AGG + Chr4:48231665-48231684 MsG0480020783.01.T01:intron 25.0%
! TTTGGCATAAACTATACATA+GGG - Chr4:48236412-48236431 None:intergenic 25.0%
!! AATTCCCATTTTCTTAACAT+TGG + Chr4:48232736-48232755 MsG0480020783.01.T01:intron 25.0%
!! AATTTTCATTACGAACCTTT+TGG + Chr4:48230555-48230574 MsG0480020783.01.T01:intron 25.0%
!! ACGATGAATTATCACAATTT+TGG - Chr4:48236430-48236449 None:intergenic 25.0%
!! AGAGGTAATTTTATGATGTT+TGG + Chr4:48231656-48231675 MsG0480020783.01.T01:intron 25.0%
!! ATATATAATTGGTTCAACCA+CGG + Chr4:48232996-48233015 MsG0480020783.01.T01:intron 25.0%
!! CAAAAACAAAGAAAGTATGT+GGG + Chr4:48230894-48230913 MsG0480020783.01.T01:intron 25.0%
!! CACATCAAGTATTTAAAACA+TGG + Chr4:48233167-48233186 MsG0480020783.01.T01:intron 25.0%
!! CATTTATTATTGTGATAGTG+AGG + Chr4:48232154-48232173 MsG0480020783.01.T01:intron 25.0%
!! CTTAAAGTCCAAGTTTTTAA+TGG - Chr4:48232071-48232090 None:intergenic 25.0%
!! GTACATGAGATTTTACTTAA+GGG + Chr4:48231226-48231245 MsG0480020783.01.T01:intron 25.0%
!! GTGTACTTTATTTGATCAAA+TGG + Chr4:48232268-48232287 MsG0480020783.01.T01:intron 25.0%
!! TGATTATAGGTTAGATTTTG+AGG + Chr4:48231797-48231816 MsG0480020783.01.T01:intron 25.0%
!! TGTACATGAGATTTTACTTA+AGG + Chr4:48231225-48231244 MsG0480020783.01.T01:intron 25.0%
!! TTCTTCATTATGATTTGTCT+TGG + Chr4:48231539-48231558 MsG0480020783.01.T01:intron 25.0%
!! TTTTGGCAAAAAATTACCAA+AGG + Chr4:48234696-48234715 MsG0480020783.01.T01:intron 25.0%
!! TTTTGGCATAAACTATACAT+AGG - Chr4:48236413-48236432 None:intergenic 25.0%
!!! AAAGTATCTATTAGCTTTAC+CGG + Chr4:48231117-48231136 MsG0480020783.01.T01:intron 25.0%
!!! AATACTGGGTTGTTTTTTTA+AGG - Chr4:48235153-48235172 None:intergenic 25.0%
!!! AATATTGATTTGGTTTATGG+AGG + Chr4:48231434-48231453 MsG0480020783.01.T01:CDS 25.0%
!!! AGATTTGATTTTACCCTTAT+AGG + Chr4:48236515-48236534 MsG0480020783.01.T01:intron 25.0%
!!! ATAACTTGGCATTTTTTCAA+AGG - Chr4:48233220-48233239 None:intergenic 25.0%
!!! ATTGTCATTGTATTTTTGCA+GGG + Chr4:48231608-48231627 MsG0480020783.01.T01:intron 25.0%
!!! CACATACTTTCTTTGTTTTT+GGG - Chr4:48230895-48230914 None:intergenic 25.0%
!!! GTTTTGATTAAACCTTTGTT+TGG + Chr4:48230447-48230466 MsG0480020783.01.T01:intron 25.0%
!!! TAATGTTTTGTTTGGTGTTT+TGG + Chr4:48230377-48230396 MsG0480020783.01.T01:intron 25.0%
!!! TATTGTCATTGTATTTTTGC+AGG + Chr4:48231607-48231626 MsG0480020783.01.T01:intron 25.0%
!!! TGTTTTAAATACTTGATGTG+AGG - Chr4:48233167-48233186 None:intergenic 25.0%
!!! TTCTTTTAGCTATACAAAGA+AGG - Chr4:48228425-48228444 None:intergenic 25.0%
!!! TTGAATTTTGGTTTTGGAAA+AGG + Chr4:48235917-48235936 MsG0480020783.01.T01:intron 25.0%
AAATTTCCAAGAAGAATGGA+TGG - Chr4:48230321-48230340 None:intergenic 30.0%
ACAATTATATGACGAGCTTT+AGG - Chr4:48236023-48236042 None:intergenic 30.0%
ACTTCACATAGATAAAGTTG+TGG + Chr4:48230759-48230778 MsG0480020783.01.T01:intron 30.0%
AGCAAAATAAGCACATATTG+TGG - Chr4:48232337-48232356 None:intergenic 30.0%
AGTATCATGTAAGATGTTGT+TGG + Chr4:48233881-48233900 MsG0480020783.01.T01:intron 30.0%
ATCTTCCACATCATAAATAC+TGG - Chr4:48235168-48235187 None:intergenic 30.0%
ATTCATGTAGGTTTACAAGT+CGG + Chr4:48232457-48232476 MsG0480020783.01.T01:intron 30.0%
CAAATATACCTTTCTCCTTT+CGG + Chr4:48231725-48231744 MsG0480020783.01.T01:intron 30.0%
CAAATCATTATTAACCCGTT+TGG - Chr4:48236246-48236265 None:intergenic 30.0%
CAATTATATGACGAGCTTTA+GGG - Chr4:48236022-48236041 None:intergenic 30.0%
CACCTATATATAGAGAAATG+TGG - Chr4:48229919-48229938 None:intergenic 30.0%
CATATTGTGGTAGAAAGATA+AGG - Chr4:48232324-48232343 None:intergenic 30.0%
CATCATAAAATTACCTCTCT+TGG - Chr4:48231654-48231673 None:intergenic 30.0%
CGGTATTGTTCCAATAATAT+GGG + Chr4:48232685-48232704 MsG0480020783.01.T01:intron 30.0%
GACATCTAAGTTCACAAATA+AGG + Chr4:48234537-48234556 MsG0480020783.01.T01:intron 30.0%
GAGTAGAATATTTGTGGAAT+GGG - Chr4:48233491-48233510 None:intergenic 30.0%
GGATCCAATGTTAAGAAAAT+GGG - Chr4:48232743-48232762 None:intergenic 30.0%
GGTATTGTTCCAATAATATG+GGG + Chr4:48232686-48232705 MsG0480020783.01.T01:intron 30.0%
GGTCTATAATACAGTTTCAT+AGG - Chr4:48229606-48229625 None:intergenic 30.0%
GTAGTGTGCAGAATATTAAT+TGG + Chr4:48233748-48233767 MsG0480020783.01.T01:intron 30.0%
GTATGAGTAGTTTAAGAGTT+TGG + Chr4:48236842-48236861 MsG0480020783.01.T01:three_prime_UTR 30.0%
GTGAAGTTGTGAAAGATAAA+TGG - Chr4:48230746-48230765 None:intergenic 30.0%
TAGAAGAAATAAAGAGATGG+AGG + Chr4:48229978-48229997 MsG0480020783.01.T01:intron 30.0%
TAGTTTAAGAGTTTGGTACT+GGG + Chr4:48236849-48236868 MsG0480020783.01.T01:three_prime_UTR 30.0%
TATGTCCATTATATGCATGA+AGG + Chr4:48235748-48235767 MsG0480020783.01.T01:intron 30.0%
TCCTATTCCAATACTCAATT+TGG + Chr4:48229674-48229693 MsG0480020783.01.T01:intron 30.0%
TCGGTATTGTTCCAATAATA+TGG + Chr4:48232684-48232703 MsG0480020783.01.T01:intron 30.0%
TCTTCCACATCATAAATACT+GGG - Chr4:48235167-48235186 None:intergenic 30.0%
TGAACTACTTAATCTCATCA+AGG + Chr4:48230519-48230538 MsG0480020783.01.T01:intron 30.0%
TGGATCCAATGTTAAGAAAA+TGG - Chr4:48232744-48232763 None:intergenic 30.0%
TGTAATTCTATCCAGTTATG+AGG - Chr4:48233034-48233053 None:intergenic 30.0%
TTAGCTATACAAAGAAGGTA+TGG - Chr4:48228420-48228439 None:intergenic 30.0%
TTATGTCACATGTGAATTTG+CGG + Chr4:48229242-48229261 MsG0480020783.01.T01:intron 30.0%
TTATTTAGCACACTATTGAC+AGG + Chr4:48229133-48229152 MsG0480020783.01.T01:intron 30.0%
TTGTGCATACAAATTGTGAA+GGG + Chr4:48229939-48229958 MsG0480020783.01.T01:intron 30.0%
TTTCATGGGGTAAATTCAAT+CGG - Chr4:48235046-48235065 None:intergenic 30.0%
TTTGATACAACCTTCATTCT+AGG - Chr4:48231930-48231949 None:intergenic 30.0%
! ATTATTCTTTTGTGTGTGAG+TGG + Chr4:48233348-48233367 MsG0480020783.01.T01:intron 30.0%
! CAGCATCACATTCAATTTTT+GGG + Chr4:48231951-48231970 MsG0480020783.01.T01:intron 30.0%
! CCAAAAACAAAGAAAGTATG+TGG + Chr4:48230893-48230912 MsG0480020783.01.T01:intron 30.0%
! GGTGTCAAGAAATATTGATT+TGG + Chr4:48231424-48231443 MsG0480020783.01.T01:intron 30.0%
! TAATATCCACTTGTTACGTT+CGG - Chr4:48234768-48234787 None:intergenic 30.0%
! TAGCTATACAAAGAAGGTAT+GGG - Chr4:48228419-48228438 None:intergenic 30.0%
! TATTATTGTGATAGTGAGGT+TGG + Chr4:48232158-48232177 MsG0480020783.01.T01:intron 30.0%
! TATTTTACTAGCTCATTGAC+AGG - Chr4:48228948-48228967 None:intergenic 30.0%
! TCAGCATCACATTCAATTTT+TGG + Chr4:48231950-48231969 MsG0480020783.01.T01:intron 30.0%
! TCTTTCTCTCTTATCTTTTC+TGG + Chr4:48229763-48229782 MsG0480020783.01.T01:intron 30.0%
! TTATTCTTTTGTGTGTGAGT+GGG + Chr4:48233349-48233368 MsG0480020783.01.T01:intron 30.0%
! TTCATTATGATTTGTCTTGG+TGG + Chr4:48231542-48231561 MsG0480020783.01.T01:intron 30.0%
! TTTTGCTTATAATAACCGGA+GGG - Chr4:48234812-48234831 None:intergenic 30.0%
! TTTTTGCTTATAATAACCGG+AGG - Chr4:48234813-48234832 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - Chr4:48233617-48233636 None:intergenic 30.0%
!! AATAAAAGCATCAGAATGCT+TGG - Chr4:48233451-48233470 None:intergenic 30.0%
!! ACATATATTCTGAAGCTGTA+AGG + Chr4:48235685-48235704 MsG0480020783.01.T01:intron 30.0%
!! ACCAAATTGAGTATTGGAAT+AGG - Chr4:48229678-48229697 None:intergenic 30.0%
!! ATGTTTTCTGCTTTTACCTA+CGG + Chr4:48228493-48228512 MsG0480020783.01.T01:intron 30.0%
!! TAAGAGGATTTGTGTTTTTG+TGG + Chr4:48230029-48230048 MsG0480020783.01.T01:intron 30.0%
!! TATCTTTTCTGGTACAATCA+GGG + Chr4:48229774-48229793 MsG0480020783.01.T01:intron 30.0%
!! TATTACAAGCGGATTTTGTA+GGG - Chr4:48230194-48230213 None:intergenic 30.0%
!! TTATCTTTTCTGGTACAATC+AGG + Chr4:48229773-48229792 MsG0480020783.01.T01:intron 30.0%
!!! AATTTTGGTTTTGGAAAAGG+TGG + Chr4:48235920-48235939 MsG0480020783.01.T01:intron 30.0%
!!! ATTTTGGTTTTGGAAAAGGT+GGG + Chr4:48235921-48235940 MsG0480020783.01.T01:intron 30.0%
!!! CAGTTTCTCAACTTTTTTCA+TGG + Chr4:48230702-48230721 MsG0480020783.01.T01:intron 30.0%
!!! CATTTTTGGTGATTTTCATG+GGG - Chr4:48235059-48235078 None:intergenic 30.0%
!!! CCACATACTTTCTTTGTTTT+TGG - Chr4:48230896-48230915 None:intergenic 30.0%
!!! GCATTTTTGGTGATTTTCAT+GGG - Chr4:48235060-48235079 None:intergenic 30.0%
!!! TATTATTTTGGCAGTCAATC+TGG - Chr4:48232764-48232783 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + Chr4:48233618-48233637 MsG0480020783.01.T01:intron 30.0%
!!! TTTTGATTTACATTGGGCTT+TGG - Chr4:48234484-48234503 None:intergenic 30.0%
AAAAGAGCTTGTCCAAAAGA+TGG + Chr4:48236058-48236077 MsG0480020783.01.T01:CDS 35.0%
AACATGCAATGACAACCATT+TGG - Chr4:48228478-48228497 None:intergenic 35.0%
AACTTACCTATCATTACACC+TGG + Chr4:48232542-48232561 MsG0480020783.01.T01:intron 35.0%
AAGAAATAAAGAGATGGAGG+AGG + Chr4:48229981-48230000 MsG0480020783.01.T01:intron 35.0%
AATAATGCTAGACTGCTAGA+GGG - Chr4:48235226-48235245 None:intergenic 35.0%
AATCACATGTGATCCATCAT+GGG - Chr4:48231782-48231801 None:intergenic 35.0%
ACAACCCAGTATTTATGATG+TGG + Chr4:48235160-48235179 MsG0480020783.01.T01:intron 35.0%
ACATTATGGACTTCTACCTA+CGG + Chr4:48228553-48228572 MsG0480020783.01.T01:intron 35.0%
AGCACGAATCATTCACAAAA+AGG + Chr4:48233299-48233318 MsG0480020783.01.T01:intron 35.0%
AGTAGTTCAATTGCGAATGA+AGG - Chr4:48230508-48230527 None:intergenic 35.0%
AGTTGCATCTAAGCAAAGTT+GGG + Chr4:48236560-48236579 MsG0480020783.01.T01:CDS 35.0%
AGTTTAAGAGTTTGGTACTG+GGG + Chr4:48236850-48236869 MsG0480020783.01.T01:three_prime_UTR 35.0%
AGTTTCTTGCACGTCTAATT+TGG - Chr4:48235108-48235127 None:intergenic 35.0%
ATCATCTTTACATAGGACCA+CGG + Chr4:48229714-48229733 MsG0480020783.01.T01:intron 35.0%
ATCTTTCATTGACAAAGCTG+TGG + Chr4:48235980-48235999 MsG0480020783.01.T01:CDS 35.0%
ATGACCAAACAAGTTACCAT+AGG + Chr4:48231690-48231709 MsG0480020783.01.T01:intron 35.0%
ATGCTGAAACGACATTTGAA+CGG + Chr4:48236197-48236216 MsG0480020783.01.T01:intron 35.0%
ATTGTGGTAGAAAGATAAGG+TGG - Chr4:48232321-48232340 None:intergenic 35.0%
CAAGTGGAAATCGTATAACT+TGG - Chr4:48233234-48233253 None:intergenic 35.0%
CATTATTAACCCGTTTGGTT+TGG - Chr4:48236241-48236260 None:intergenic 35.0%
CCACACAATCATCTTTACAT+AGG + Chr4:48229707-48229726 MsG0480020783.01.T01:intron 35.0%
CCTATGTAAAGATGATTGTG+TGG - Chr4:48229710-48229729 None:intergenic 35.0%
CTACAAAATCCGCTTGTAAT+AGG + Chr4:48230193-48230212 MsG0480020783.01.T01:intron 35.0%
GATGGATCACATGTGATTAT+AGG + Chr4:48231784-48231803 MsG0480020783.01.T01:intron 35.0%
GGAGTAGAATATTTGTGGAA+TGG - Chr4:48233492-48233511 None:intergenic 35.0%
GTAAAGATGATTGTGTGGTT+TGG - Chr4:48229705-48229724 None:intergenic 35.0%
GTAGTTTAAGAGTTTGGTAC+TGG + Chr4:48236848-48236867 MsG0480020783.01.T01:three_prime_UTR 35.0%
GTTGTGCATACAAATTGTGA+AGG + Chr4:48229938-48229957 MsG0480020783.01.T01:intron 35.0%
GTTTCTCAAGCTGTTTATGA+TGG + Chr4:48231482-48231501 MsG0480020783.01.T01:CDS 35.0%
TAATCACATGTGATCCATCA+TGG - Chr4:48231783-48231802 None:intergenic 35.0%
TAGTCTCCTTCGAAAAACAT+TGG - Chr4:48232933-48232952 None:intergenic 35.0%
TATGTAAAATAGGAAACCCG+TGG - Chr4:48229734-48229753 None:intergenic 35.0%
TATTGAGCTTGGAAATGAGT+TGG + Chr4:48230091-48230110 MsG0480020783.01.T01:intron 35.0%
TCAACTAGGTCATCTATTGA+GGG + Chr4:48234009-48234028 MsG0480020783.01.T01:intron 35.0%
TCCTTACAAATTGTACACGA+GGG - Chr4:48229860-48229879 None:intergenic 35.0%
TCGGAATTCTGATGCAATTT+GGG + Chr4:48234404-48234423 MsG0480020783.01.T01:intron 35.0%
TCTTTCGTGCATGTTTGAAT+AGG - Chr4:48236470-48236489 None:intergenic 35.0%
TGATGATATGTTACATCGAG+CGG + Chr4:48229031-48229050 MsG0480020783.01.T01:intron 35.0%
TGCTTATAATAGTGACCAGA+GGG + Chr4:48234927-48234946 MsG0480020783.01.T01:intron 35.0%
TGGGTGAATGTTCATAGTTA+AGG - Chr4:48228796-48228815 None:intergenic 35.0%
TGGTATCAAGAAACTCATCA+AGG - Chr4:48230477-48230496 None:intergenic 35.0%
TTATAGCTACTCTTGTTACC+AGG - Chr4:48230062-48230081 None:intergenic 35.0%
TTCGGAATTCTGATGCAATT+TGG + Chr4:48234403-48234422 MsG0480020783.01.T01:intron 35.0%
TTCTCAACGGATGGAAAAAA+AGG + Chr4:48235566-48235585 MsG0480020783.01.T01:intron 35.0%
TTCTCAACGGATGGAAAAAA+AGG - Chr4:48235585-48235566 None:intergenic 35.0%
TTGCTTATAATAGTGACCAG+AGG + Chr4:48234926-48234945 MsG0480020783.01.T01:intron 35.0%
TTTGGATAACAAAAGCAAGG+TGG - Chr4:48232401-48232420 None:intergenic 35.0%
! ATTAACTACGTTTTGTCCGT+AGG - Chr4:48228512-48228531 None:intergenic 35.0%
! ATTTTTGCAGGGTTATTCCA+AGG + Chr4:48231619-48231638 MsG0480020783.01.T01:intron 35.0%
! CAGATTTGAGTGTTTGAGTT+TGG + Chr4:48232115-48232134 MsG0480020783.01.T01:intron 35.0%
! GTCAACTAGGTCATATTTTG+AGG - Chr4:48233522-48233541 None:intergenic 35.0%
! TGATGATGATGATGTTGGAT+GGG - Chr4:48231897-48231916 None:intergenic 35.0%
! TTTCATTACGAACCTTTTGG+TGG + Chr4:48230558-48230577 MsG0480020783.01.T01:intron 35.0%
! TTTTCTTCTCTCTCTTTGTG+AGG + Chr4:48229504-48229523 MsG0480020783.01.T01:intron 35.0%
!! ATTGATTTGGTTTATGGAGG+AGG + Chr4:48231437-48231456 MsG0480020783.01.T01:CDS 35.0%
!! CTAGGTCATATTTTGAGGAA+CGG - Chr4:48233517-48233536 None:intergenic 35.0%
!! CTATTACAAGCGGATTTTGT+AGG - Chr4:48230195-48230214 None:intergenic 35.0%
!! GGAAACTTACTGGTTTATCA+TGG - Chr4:48235831-48235850 None:intergenic 35.0%
!! TATTTCAAGTTCTCAACGGA+TGG + Chr4:48235557-48235576 MsG0480020783.01.T01:intron 35.0%
!! TATTTCAAGTTCTCAACGGA+TGG - Chr4:48235576-48235557 None:intergenic 35.0%
!! TGAGTATCGAGTATTAGCTT+GGG - Chr4:48228815-48228834 None:intergenic 35.0%
!! TGGAAGATTAGTCTTGTCTT+GGG + Chr4:48235180-48235199 MsG0480020783.01.T01:intron 35.0%
!! TGTGGAGAGTATTCCTATAA+GGG - Chr4:48236531-48236550 None:intergenic 35.0%
!! TTCTCCTATGGTAACTTGTT+TGG - Chr4:48231697-48231716 None:intergenic 35.0%
!! TTGATGATGATGATGTTGGA+TGG - Chr4:48231898-48231917 None:intergenic 35.0%
!! TTGTGGAGAGTATTCCTATA+AGG - Chr4:48236532-48236551 None:intergenic 35.0%
!!! CGCATTTTTGGTGATTTTCA+TGG - Chr4:48235061-48235080 None:intergenic 35.0%
!!! GACACTCATTTTGAAACAGA+GGG + Chr4:48233858-48233877 MsG0480020783.01.T01:intron 35.0%
!!! TTTTTGGTTAGTGTGGACTA+TGG + Chr4:48236724-48236743 MsG0480020783.01.T01:three_prime_UTR 35.0%
AAAAATGGCAAGATTGAGGG+AGG - Chr4:48235852-48235871 None:intergenic 40.0%
AAAGATGCTGCTATTGAGCT+TGG + Chr4:48230080-48230099 MsG0480020783.01.T01:intron 40.0%
AAATGTCACCGAAAGGAGAA+AGG - Chr4:48231736-48231755 None:intergenic 40.0%
ACCTCAAACACCTAGAATGA+AGG + Chr4:48231917-48231936 MsG0480020783.01.T01:intron 40.0%
ACCTTCATTCTAGGTGTTTG+AGG - Chr4:48231921-48231940 None:intergenic 40.0%
ACTTGAGATGTCACAATGTG+AGG - Chr4:48236607-48236626 None:intergenic 40.0%
AGAAACTCTTAGGTGGTCAT+TGG - Chr4:48229572-48229591 None:intergenic 40.0%
AGAATTTCGCTGACCACTTT+CGG + Chr4:48231157-48231176 MsG0480020783.01.T01:intron 40.0%
AGACGTGCAAGAAACTCATA+AGG + Chr4:48235112-48235131 MsG0480020783.01.T01:intron 40.0%
AGATAAGAACATACACCCTC+CGG + Chr4:48234794-48234813 MsG0480020783.01.T01:intron 40.0%
AGATAAGGTGGCATTTCACA+TGG - Chr4:48232309-48232328 None:intergenic 40.0%
AGATTGCCAGGTGTAATGAT+AGG - Chr4:48232551-48232570 None:intergenic 40.0%
AGCCACCTTCATGCATATAA+TGG - Chr4:48235756-48235775 None:intergenic 40.0%
AGCTTCTTGAGGTCATAACT+TGG + Chr4:48235791-48235810 MsG0480020783.01.T01:CDS 40.0%
AGGTGAAAATCTTCCCATGA+TGG + Chr4:48231766-48231785 MsG0480020783.01.T01:intron 40.0%
ATATGCATGAAGGTGGCTAT+GGG + Chr4:48235758-48235777 MsG0480020783.01.T01:intron 40.0%
ATCATTACACCTGGCAATCT+GGG + Chr4:48232551-48232570 MsG0480020783.01.T01:intron 40.0%
CATCAAGGAACACCAAACAA+AGG - Chr4:48230462-48230481 None:intergenic 40.0%
CATTAAAATGGACGCACGTT+TGG - Chr4:48236151-48236170 None:intergenic 40.0%
CGACAAAAGAAACTGAGGAA+GGG + Chr4:48235297-48235316 MsG0480020783.01.T01:intron 40.0%
CGGATGGAGTAGAATATTTG+TGG - Chr4:48233497-48233516 None:intergenic 40.0%
CTAAGCAAAGTTGGGAAACT+GGG + Chr4:48236568-48236587 MsG0480020783.01.T01:CDS 40.0%
CTCCTTACAAATTGTACACG+AGG - Chr4:48229861-48229880 None:intergenic 40.0%
CTTTCGGTGACATTTCACAT+GGG + Chr4:48231741-48231760 MsG0480020783.01.T01:intron 40.0%
GAATAATGCTAGACTGCTAG+AGG - Chr4:48235227-48235246 None:intergenic 40.0%
GACATCACTCCTATTACAAG+CGG - Chr4:48230205-48230224 None:intergenic 40.0%
GACTTATAGTGACAGCCAAA+TGG + Chr4:48228460-48228479 MsG0480020783.01.T01:intron 40.0%
GAGTTGCATCTAAGCAAAGT+TGG + Chr4:48236559-48236578 MsG0480020783.01.T01:CDS 40.0%
GATAAGGTGGCATTTCACAT+GGG - Chr4:48232308-48232327 None:intergenic 40.0%
GATGATATGTTACATCGAGC+GGG + Chr4:48229032-48229051 MsG0480020783.01.T01:intron 40.0%
GATGCAACTCTTTCATGTTG+TGG - Chr4:48236549-48236568 None:intergenic 40.0%
GCATACAAATTGTGAAGGGT+TGG + Chr4:48229943-48229962 MsG0480020783.01.T01:intron 40.0%
GCATCAAAGAAAAGCTGAGA+TGG + Chr4:48233425-48233444 MsG0480020783.01.T01:CDS 40.0%
GCTTCTTGAGGTCATAACTT+GGG + Chr4:48235792-48235811 MsG0480020783.01.T01:CDS 40.0%
GGGTAAATTCAATCGGCATA+GGG - Chr4:48235039-48235058 None:intergenic 40.0%
GGTAAATTCAATCGGCATAG+GGG - Chr4:48235038-48235057 None:intergenic 40.0%
GGTCTCACCAAATTGAGTAT+TGG - Chr4:48229684-48229703 None:intergenic 40.0%
GTAAATTCAATCGGCATAGG+GGG - Chr4:48235037-48235056 None:intergenic 40.0%
GTCAACTAGGTCATCTATTG+AGG + Chr4:48234008-48234027 MsG0480020783.01.T01:intron 40.0%
GTCCATTATATGCATGAAGG+TGG + Chr4:48235751-48235770 MsG0480020783.01.T01:intron 40.0%
GTGGGATTGTTGAATGTAGA+TGG + Chr4:48235939-48235958 MsG0480020783.01.T01:CDS 40.0%
TATATGCATGAAGGTGGCTA+TGG + Chr4:48235757-48235776 MsG0480020783.01.T01:intron 40.0%
TATCATTACACCTGGCAATC+TGG + Chr4:48232550-48232569 MsG0480020783.01.T01:intron 40.0%
TCAACAAGATCAACGATGTG+TGG + Chr4:48228998-48229017 MsG0480020783.01.T01:intron 40.0%
TCATCAACACTCTGTCATCA+TGG - Chr4:48229627-48229646 None:intergenic 40.0%
TCATCTTTACATAGGACCAC+GGG + Chr4:48229715-48229734 MsG0480020783.01.T01:intron 40.0%
TCCAGGCTCTATAAAATTCC+TGG + Chr4:48229276-48229295 MsG0480020783.01.T01:intron 40.0%
TCCCTCGTGTACAATTTGTA+AGG + Chr4:48229856-48229875 MsG0480020783.01.T01:intron 40.0%
TCTAAGCAAAGTTGGGAAAC+TGG + Chr4:48236567-48236586 MsG0480020783.01.T01:CDS 40.0%
TCTCAAGCTGTTTATGATGG+AGG + Chr4:48231485-48231504 MsG0480020783.01.T01:CDS 40.0%
TGCGAATGAAGGAATTGATG+TGG - Chr4:48230497-48230516 None:intergenic 40.0%
TTCGTGCATGTTTGAATAGG+CGG - Chr4:48236467-48236486 None:intergenic 40.0%
TTTCATTGACAAAGCTGTGG+AGG + Chr4:48235983-48236002 MsG0480020783.01.T01:CDS 40.0%
TTTCCAAGAAGAATGGATGG+TGG - Chr4:48230318-48230337 None:intergenic 40.0%
! ATATGCATTGGTACGTGTGT+CGG + Chr4:48233984-48234003 MsG0480020783.01.T01:intron 40.0%
! ATGTACGTACCTCCATCTTT+TGG - Chr4:48236073-48236092 None:intergenic 40.0%
! CATTGACAGGACTTGATAAC+TGG - Chr4:48228935-48228954 None:intergenic 40.0%
! CATTGTGACATCTCAAGTTG+TGG + Chr4:48236609-48236628 MsG0480020783.01.T01:three_prime_UTR 40.0%
! CCTTCCTCAGTTTCTTTTGT+CGG - Chr4:48235299-48235318 None:intergenic 40.0%
! CGTTGTCATGGTTGTGTTTT+TGG + Chr4:48228303-48228322 MsG0480020783.01.T01:intron 40.0%
! CTTTTATTGCCTTACCAGGT+TGG + Chr4:48233463-48233482 MsG0480020783.01.T01:intron 40.0%
! GACAAGCTCTTTTGTTGATG+GGG - Chr4:48236051-48236070 None:intergenic 40.0%
! GATGATGATGATGTTGGATG+GGG - Chr4:48231896-48231915 None:intergenic 40.0%
! GATGCTTTTATTGCCTTACC+AGG + Chr4:48233459-48233478 MsG0480020783.01.T01:CDS 40.0%
! GGACAAGCTCTTTTGTTGAT+GGG - Chr4:48236052-48236071 None:intergenic 40.0%
! GTTTAAGAGTTTGGTACTGG+GGG + Chr4:48236851-48236870 MsG0480020783.01.T01:three_prime_UTR 40.0%
! TCATGTGCATTTTTACCACC+CGG + Chr4:48228367-48228386 MsG0480020783.01.T01:intron 40.0%
! TGGACAAGCTCTTTTGTTGA+TGG - Chr4:48236053-48236072 None:intergenic 40.0%
! TGGTAGTGTTTGATGTTGCT+GGG + Chr4:48232178-48232197 MsG0480020783.01.T01:intron 40.0%
! TTCGTAGTGGAGAAACTCTT+AGG - Chr4:48229582-48229601 None:intergenic 40.0%
! TTGCGGTCAAAATTTTGTCC+AGG + Chr4:48229259-48229278 MsG0480020783.01.T01:intron 40.0%
!! AAAGAGAAGTGCTATGGTGT+GGG - Chr4:48231848-48231867 None:intergenic 40.0%
!! AAGAATGGATGGTGGACATT+AGG - Chr4:48230310-48230329 None:intergenic 40.0%
!! ATGATTTGTCTTGGTGGTGA+TGG + Chr4:48231548-48231567 MsG0480020783.01.T01:intron 40.0%
!! ATTACGAACCTTTTGGTGGT+GGG + Chr4:48230562-48230581 MsG0480020783.01.T01:intron 40.0%
!! CGAAGGAGACTAGTATTGAT+CGG + Chr4:48232941-48232960 MsG0480020783.01.T01:intron 40.0%
!! GAGAAGAAAGAGAAGTGCTA+TGG - Chr4:48231854-48231873 None:intergenic 40.0%
!! GAGGTTGATGATGATGATGT+TGG - Chr4:48231902-48231921 None:intergenic 40.0%
!! GTCATATTTTGAGGAACGGA+TGG - Chr4:48233513-48233532 None:intergenic 40.0%
!! GTGAGTATCGAGTATTAGCT+TGG - Chr4:48228816-48228835 None:intergenic 40.0%
!! GTGGAAGATTAGTCTTGTCT+TGG + Chr4:48235179-48235198 MsG0480020783.01.T01:intron 40.0%
!! TCCTTTCTGAAACCTCTTTG+CGG - Chr4:48229097-48229116 None:intergenic 40.0%
!! TGTAGTGGATAGCAAAACAG+TGG + Chr4:48234950-48234969 MsG0480020783.01.T01:intron 40.0%
!! TGTTTTTGTGGTAGTAGTCC+TGG + Chr4:48230041-48230060 MsG0480020783.01.T01:intron 40.0%
!! TTGGTAGTGTTTGATGTTGC+TGG + Chr4:48232177-48232196 MsG0480020783.01.T01:intron 40.0%
!!! CGACACTCATTTTGAAACAG+AGG + Chr4:48233857-48233876 MsG0480020783.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+TGG - Chr4:48233613-48233632 None:intergenic 40.0%
!!! TTGGTGCCAATGTTTTTCGA+AGG + Chr4:48232924-48232943 MsG0480020783.01.T01:intron 40.0%
AATGATGAGGGCTTCAGAAG+TGG - Chr4:48233260-48233279 None:intergenic 45.0%
ACCGCAAAGAGGTTTCAGAA+AGG + Chr4:48229093-48229112 MsG0480020783.01.T01:intron 45.0%
ACTGGTCATGGTTGTGTTTC+TGG + Chr4:48229306-48229325 MsG0480020783.01.T01:CDS 45.0%
AGAAACACAACCATGACCAG+TGG - Chr4:48229307-48229326 None:intergenic 45.0%
AGAGCTTGTCCAAAAGATGG+AGG + Chr4:48236061-48236080 MsG0480020783.01.T01:CDS 45.0%
AGTGTTTGATGTTGCTGGGA+AGG + Chr4:48232182-48232201 MsG0480020783.01.T01:intron 45.0%
ATGATGAGGGCTTCAGAAGT+GGG - Chr4:48233259-48233278 None:intergenic 45.0%
ATGGAGGTCGACATGTGATT+GGG + Chr4:48231501-48231520 MsG0480020783.01.T01:CDS 45.0%
ATTGACAAAGCTGTGGAGGA+AGG + Chr4:48235987-48236006 MsG0480020783.01.T01:CDS 45.0%
CAGTTTCATAGGGTTCGTAG+TGG - Chr4:48229595-48229614 None:intergenic 45.0%
CCATGTGAAATGTCACCGAA+AGG - Chr4:48231743-48231762 None:intergenic 45.0%
CCGACAAAAGAAACTGAGGA+AGG + Chr4:48235296-48235315 MsG0480020783.01.T01:intron 45.0%
CCTTTCGGTGACATTTCACA+TGG + Chr4:48231740-48231759 MsG0480020783.01.T01:intron 45.0%
CGATTCTTGGTCCTCATAAC+TGG + Chr4:48233020-48233039 MsG0480020783.01.T01:intron 45.0%
CGTTGTCATGGTTGTGTTTC+CGG + Chr4:48228259-48228278 MsG0480020783.01.T01:CDS 45.0%
CTCTAGCGCATATTAGTCAC+CGG - Chr4:48231139-48231158 None:intergenic 45.0%
GAGAACAACGATGACAACGA+CGG - Chr4:48229406-48229425 None:intergenic 45.0%
GAGGGACAAAAATGCTCAGA+AGG - Chr4:48232584-48232603 None:intergenic 45.0%
GATGACAACGACGGAAAAGA+TGG - Chr4:48229397-48229416 None:intergenic 45.0%
GATTGAGGGAGGAAACTTAC+TGG - Chr4:48235841-48235860 None:intergenic 45.0%
GCCGAAGACAACAACGATAA+CGG - Chr4:48229370-48229389 None:intergenic 45.0%
GCCGTTATCGTTGTTGTCTT+CGG + Chr4:48229366-48229385 MsG0480020783.01.T01:CDS 45.0%
GGCAACACTATTGTCCCATT+TGG + Chr4:48234115-48234134 MsG0480020783.01.T01:intron 45.0%
GGGGTAAATTCAATCGGCAT+AGG - Chr4:48235040-48235059 None:intergenic 45.0%
GGTGACATTTCACATGGGAA+AGG + Chr4:48231746-48231765 MsG0480020783.01.T01:intron 45.0%
GTCATAACTTGGGCTCAACT+TGG + Chr4:48235802-48235821 MsG0480020783.01.T01:CDS 45.0%
GTCATCGTTGTTCTCTCCAT+CGG + Chr4:48229411-48229430 MsG0480020783.01.T01:intron 45.0%
GTCATCTATTGAGGGACGAA+GGG + Chr4:48234017-48234036 MsG0480020783.01.T01:intron 45.0%
TAGACCAACGCCAAACCAAA+CGG + Chr4:48236228-48236247 MsG0480020783.01.T01:intron 45.0%
TATCCTCCGAACGTAACAAG+TGG + Chr4:48234759-48234778 MsG0480020783.01.T01:intron 45.0%
TCATTACACCTGGCAATCTG+GGG + Chr4:48232552-48232571 MsG0480020783.01.T01:intron 45.0%
TGTCCACCATCCATTCTTCT+TGG + Chr4:48230312-48230331 MsG0480020783.01.T01:intron 45.0%
TGTGAATGATTCGTGCTGCA+TGG - Chr4:48233296-48233315 None:intergenic 45.0%
TTAGTGACAGCCAAAACCGT+AGG - Chr4:48228572-48228591 None:intergenic 45.0%
TTCGAACATTCACCGCAAAG+AGG + Chr4:48229082-48229101 MsG0480020783.01.T01:intron 45.0%
! AGGGGGCGCAATAAATATGA+TGG - Chr4:48235020-48235039 None:intergenic 45.0%
! CATTACGAACCTTTTGGTGG+TGG + Chr4:48230561-48230580 MsG0480020783.01.T01:intron 45.0%
! CGGATTTTGTAGGGTTTGTC+CGG - Chr4:48230185-48230204 None:intergenic 45.0%
! CTTTGTGAGGTGTCATGCAT+TGG + Chr4:48229517-48229536 MsG0480020783.01.T01:intron 45.0%
! GAAGACAACAACGATAACGG+CGG - Chr4:48229367-48229386 None:intergenic 45.0%
! GATGTGAGGTACTACAAGTG+AGG - Chr4:48233153-48233172 None:intergenic 45.0%
! GCCAGGAATTTTATAGAGCC+TGG - Chr4:48229280-48229299 None:intergenic 45.0%
! GGGGGCGCAATAAATATGAT+GGG - Chr4:48235019-48235038 None:intergenic 45.0%
! GTAGTGGAGAAACTCTTAGG+TGG - Chr4:48229579-48229598 None:intergenic 45.0%
! TATCCACTTGTTACGTTCGG+AGG - Chr4:48234765-48234784 None:intergenic 45.0%
! TGACAGGACTTGATAACTGG+TGG - Chr4:48228932-48228951 None:intergenic 45.0%
! TGGACTTCTACCTACGGTTT+TGG + Chr4:48228559-48228578 MsG0480020783.01.T01:intron 45.0%
!! AGCTTTGAGAGAGAGAGAGA+GGG - Chr4:48232602-48232621 None:intergenic 45.0%
!! GAAAGAGAAGTGCTATGGTG+TGG - Chr4:48231849-48231868 None:intergenic 45.0%
!! TCATGGTTGTGTTTCTGGCA+AGG + Chr4:48229311-48229330 MsG0480020783.01.T01:CDS 45.0%
!! TGGTGGTGATGGTGTTATGT+TGG + Chr4:48231559-48231578 MsG0480020783.01.T01:intron 45.0%
!!! TCATGGTTGTGTTTTTGGCG+AGG + Chr4:48228308-48228327 MsG0480020783.01.T01:intron 45.0%
!!! TTACGAACCTTTTGGTGGTG+GGG + Chr4:48230563-48230582 MsG0480020783.01.T01:intron 45.0%
!! AAAATAATAATATGTAAAAT+AGG - Chr4:48229744-48229763 None:intergenic 5.0%
!! ATATATATATATTAATTTAG+AGG + Chr4:48231037-48231056 MsG0480020783.01.T01:intron 5.0%
!!! CATTTAAATAATTATTTTTT+GGG + Chr4:48235322-48235341 MsG0480020783.01.T01:intron 5.0%
!!! GTTTTTTTTTTTTTTTAATT+CGG + Chr4:48232665-48232684 MsG0480020783.01.T01:intron 5.0%
AAAATTCCTGGCTTCGCCAC+TGG + Chr4:48229288-48229307 MsG0480020783.01.T01:CDS 50.0%
AAGGACACTGATGCCAAGAG+AGG + Chr4:48231638-48231657 MsG0480020783.01.T01:CDS 50.0%
AAGTTGGGAAACTGGGAAGC+TGG + Chr4:48236575-48236594 MsG0480020783.01.T01:CDS 50.0%
AGAAGAACCCCACCACCAAA+AGG - Chr4:48230573-48230592 None:intergenic 50.0%
AGACCAACGCCAAACCAAAC+GGG + Chr4:48236229-48236248 MsG0480020783.01.T01:intron 50.0%
AGAGACAGTGGGAGAAGTGA+AGG + Chr4:48233389-48233408 MsG0480020783.01.T01:CDS 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - Chr4:48230965-48230984 None:intergenic 50.0%
AGGAAAGATGCCACCGAAAG+TGG - Chr4:48231173-48231192 None:intergenic 50.0%
ATCGTTGTTCTCTCCATCGG+TGG + Chr4:48229414-48229433 MsG0480020783.01.T01:intron 50.0%
ATGATGTTGGATGGGGACTG+GGG - Chr4:48231889-48231908 None:intergenic 50.0%
ATGTTGCTGGGAAGGAGAGA+AGG + Chr4:48232190-48232209 MsG0480020783.01.T01:intron 50.0%
ATTTCATGCCATGCCACCGA+TGG - Chr4:48229430-48229449 None:intergenic 50.0%
ATTTCGCTGACCACTTTCGG+TGG + Chr4:48231160-48231179 MsG0480020783.01.T01:intron 50.0%
CAGATCACTGGAGAGACAGT+GGG + Chr4:48233378-48233397 MsG0480020783.01.T01:intron 50.0%
GAATGGGAACCAACCTGGTA+AGG - Chr4:48233475-48233494 None:intergenic 50.0%
GACACTTGAGGAGCTTCTTG+AGG + Chr4:48235780-48235799 MsG0480020783.01.T01:CDS 50.0%
GATGATGTTGGATGGGGACT+GGG - Chr4:48231890-48231909 None:intergenic 50.0%
GATGGAGGTCGACATGTGAT+TGG + Chr4:48231500-48231519 MsG0480020783.01.T01:CDS 50.0%
GGTCATCTATTGAGGGACGA+AGG + Chr4:48234016-48234035 MsG0480020783.01.T01:intron 50.0%
GTTTATGGAGGAGGCAGCAT+TGG + Chr4:48231446-48231465 MsG0480020783.01.T01:CDS 50.0%
TACGTGTGTCGGAGTCAACT+AGG + Chr4:48233995-48234014 MsG0480020783.01.T01:intron 50.0%
TCGGCCGACAAAAGAAACTG+AGG + Chr4:48235292-48235311 MsG0480020783.01.T01:intron 50.0%
TCTCTTGGCATCAGTGTCCT+TGG - Chr4:48231639-48231658 None:intergenic 50.0%
TGTCGTCAACGTCGTTGTCA+TGG + Chr4:48228247-48228266 MsG0480020783.01.T01:CDS 50.0%
TTGCTATCCACTACACCCTC+TGG - Chr4:48234945-48234964 None:intergenic 50.0%
TTGTGGAATGGGAACCAACC+TGG - Chr4:48233480-48233499 None:intergenic 50.0%
! AAAGTTGGCCTCGCCAGAAA+CGG - Chr4:48228222-48228241 None:intergenic 50.0%
! AGTGGGTTTGTGCAGATCAC+TGG + Chr4:48233366-48233385 MsG0480020783.01.T01:intron 50.0%
! ATAGTGACCAGAGGGTGTAG+TGG + Chr4:48234935-48234954 MsG0480020783.01.T01:intron 50.0%
! GGAAGAGATGATGACGACGA+CGG - Chr4:48229346-48229365 None:intergenic 50.0%
! GGGCATTGCGTTGCTTGTTA+GGG - Chr4:48235206-48235225 None:intergenic 50.0%
! GTGAGGTGTCATGCATTGGT+TGG + Chr4:48229521-48229540 MsG0480020783.01.T01:intron 50.0%
! GTTCAACCACGGTCGATTCT+TGG + Chr4:48233007-48233026 MsG0480020783.01.T01:intron 50.0%
! TGATGATGTTGGATGGGGAC+TGG - Chr4:48231891-48231910 None:intergenic 50.0%
! TTTGGTACTGGGGGAGAAAC+TGG + Chr4:48236860-48236879 MsG0480020783.01.T01:three_prime_UTR 50.0%
!! AGGAGGCAGCATTGGTTTGA+TGG + Chr4:48231454-48231473 MsG0480020783.01.T01:CDS 50.0%
!! AGGGCATTGCGTTGCTTGTT+AGG - Chr4:48235207-48235226 None:intergenic 50.0%
!! CAGCATTGGTTTGATGGGGT+TGG + Chr4:48231460-48231479 MsG0480020783.01.T01:CDS 50.0%
!! GAGCTTTGAGAGAGAGAGAG+AGG - Chr4:48232603-48232622 None:intergenic 50.0%
!! GAGGCAGCATTGGTTTGATG+GGG + Chr4:48231456-48231475 MsG0480020783.01.T01:CDS 50.0%
!! GGAGGCAGCATTGGTTTGAT+GGG + Chr4:48231455-48231474 MsG0480020783.01.T01:CDS 50.0%
!! TAACCCGTTTGGTTTGGCGT+TGG - Chr4:48236235-48236254 None:intergenic 50.0%
AAGGAGAGAAGGTTGCTGGG+AGG + Chr4:48232201-48232220 MsG0480020783.01.T01:intron 55.0%
AGGTGGCTATGGGACACTTG+AGG + Chr4:48235768-48235787 MsG0480020783.01.T01:intron 55.0%
AGTCGTTGACGTCGCTGTCA+TGG + Chr4:48228344-48228363 MsG0480020783.01.T01:intron 55.0%
CGGCGACAACCTCAAACCTT+TGG - Chr4:48234715-48234734 None:intergenic 55.0%
CGTTGTCGTCGTCGTTGTCA+TGG + Chr4:48228291-48228310 MsG0480020783.01.T01:CDS 55.0%
GACAACGACGACGACAACGT+TGG - Chr4:48228290-48228309 None:intergenic 55.0%
GACAACGACGTTGACGACAG+CGG - Chr4:48228246-48228265 None:intergenic 55.0%
GCAGATCACTGGAGAGACAG+TGG + Chr4:48233377-48233396 MsG0480020783.01.T01:intron 55.0%
GGAGAAGTGAAGGCAGTAGC+AGG + Chr4:48233399-48233418 MsG0480020783.01.T01:CDS 55.0%
GGGAAGGAGAGAAGGTTGCT+GGG + Chr4:48232198-48232217 MsG0480020783.01.T01:intron 55.0%
GTTGACGACAGCGGCAAAGT+TGG - Chr4:48228237-48228256 None:intergenic 55.0%
TCATGGTTGTGTTTCCGGCG+AGG + Chr4:48228264-48228283 MsG0480020783.01.T01:CDS 55.0%
TGAGGACCAAGAATCGACCG+TGG - Chr4:48233016-48233035 None:intergenic 55.0%
TGGGAAGGAGAGAAGGTTGC+TGG + Chr4:48232197-48232216 MsG0480020783.01.T01:intron 55.0%
TGTTCTCTCCATCGGTGGCA+TGG + Chr4:48229419-48229438 MsG0480020783.01.T01:intron 55.0%
! GCTTCAGAAGTGGGCTCAAG+TGG - Chr4:48233250-48233269 None:intergenic 55.0%
!! TTTTTACCACCCGGCTAGCC+CGG + Chr4:48228376-48228395 MsG0480020783.01.T01:intron 55.0%
GACAGCGACGTCAACGACTG+CGG - Chr4:48228343-48228362 None:intergenic 60.0%
GAGAGAAGGTTGCTGGGAGG+AGG + Chr4:48232204-48232223 MsG0480020783.01.T01:intron 60.0%
GTCAACGACTGCGGCAACGT+TGG - Chr4:48228334-48228353 None:intergenic 60.0%
! ACACCTGGCAATCTGGGGCA+TGG + Chr4:48232557-48232576 MsG0480020783.01.T01:intron 60.0%
!! TTTTACCACCCGGCTAGCCC+GGG + Chr4:48228377-48228396 MsG0480020783.01.T01:intron 60.0%
ATGGGGACTGGGGAGCAACG+AGG - Chr4:48231879-48231898 None:intergenic 65.0%
CCATGACCAGTGGCGAAGCC+AGG - Chr4:48229297-48229316 None:intergenic 65.0%
CCTGGCTTCGCCACTGGTCA+TGG + Chr4:48229294-48229313 MsG0480020783.01.T01:CDS 65.0%
GGACCATGCCCCAGATTGCC+AGG - Chr4:48232563-48232582 None:intergenic 65.0%
TGGGGACTGGGGAGCAACGA+GGG - Chr4:48231878-48231897 None:intergenic 65.0%
! GACGACAACGTTGGCCTCGC+CGG - Chr4:48228281-48228300 None:intergenic 65.0%
GGTTGAGCCCAGCGTGTGCC+CGG - Chr4:48228398-48228417 None:intergenic 70.0%
GTTGAGCCCAGCGTGTGCCC+GGG - Chr4:48228397-48228416 None:intergenic 70.0%
! GGCTAGCCCGGGCACACGCT+GGG + Chr4:48228388-48228407 MsG0480020783.01.T01:intron 75.0%
!! AGCGTGTGCCCGGGCTAGCC+GGG - Chr4:48228388-48228407 None:intergenic 75.0%
!! CAGCGTGTGCCCGGGCTAGC+CGG - Chr4:48228389-48228408 None:intergenic 75.0%
!! CGGCTAGCCCGGGCACACGC+TGG + Chr4:48228387-48228406 MsG0480020783.01.T01:intron 80.0%
!!! GTGTGCCCGGGCTAGCCGGG+TGG - Chr4:48228385-48228404 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 48228212 48236934 48228212 ID=MsG0480020783.01;Name=MsG0480020783.01
Chr4 mRNA 48228212 48236934 48228212 ID=MsG0480020783.01.T01;Parent=MsG0480020783.01;Name=MsG0480020783.01.T01;_AED=0.48;_eAED=0.59;_QI=0|0.71|0.75|1|1|1|8|332|248
Chr4 exon 48228212 48228312 48228212 ID=MsG0480020783.01.T01:exon:28187;Parent=MsG0480020783.01.T01
Chr4 exon 48229281 48229416 48229281 ID=MsG0480020783.01.T01:exon:28188;Parent=MsG0480020783.01.T01
Chr4 exon 48231425 48231522 48231425 ID=MsG0480020783.01.T01:exon:28189;Parent=MsG0480020783.01.T01
Chr4 exon 48231629 48231659 48231629 ID=MsG0480020783.01.T01:exon:28190;Parent=MsG0480020783.01.T01
Chr4 exon 48233381 48233480 48233381 ID=MsG0480020783.01.T01:exon:28191;Parent=MsG0480020783.01.T01
Chr4 exon 48235770 48235840 48235770 ID=MsG0480020783.01.T01:exon:28192;Parent=MsG0480020783.01.T01
Chr4 exon 48235939 48236082 48235939 ID=MsG0480020783.01.T01:exon:28193;Parent=MsG0480020783.01.T01
Chr4 exon 48236537 48236934 48236537 ID=MsG0480020783.01.T01:exon:28194;Parent=MsG0480020783.01.T01
Chr4 CDS 48228212 48228312 48228212 ID=MsG0480020783.01.T01:cds;Parent=MsG0480020783.01.T01
Chr4 CDS 48229281 48229416 48229281 ID=MsG0480020783.01.T01:cds;Parent=MsG0480020783.01.T01
Chr4 CDS 48231425 48231522 48231425 ID=MsG0480020783.01.T01:cds;Parent=MsG0480020783.01.T01
Chr4 CDS 48231629 48231659 48231629 ID=MsG0480020783.01.T01:cds;Parent=MsG0480020783.01.T01
Chr4 CDS 48233381 48233480 48233381 ID=MsG0480020783.01.T01:cds;Parent=MsG0480020783.01.T01
Chr4 CDS 48235770 48235840 48235770 ID=MsG0480020783.01.T01:cds;Parent=MsG0480020783.01.T01
Chr4 CDS 48235939 48236082 48235939 ID=MsG0480020783.01.T01:cds;Parent=MsG0480020783.01.T01
Chr4 CDS 48236537 48236602 48236537 ID=MsG0480020783.01.T01:cds;Parent=MsG0480020783.01.T01
Chr4 three_prime_UTR 48236603 48236934 48236603 ID=MsG0480020783.01.T01:three_prime_utr;Parent=MsG0480020783.01.T01
Gene Sequence

>MsG0480020783.01.T01

ATGGTTGCCGTTTCTGGCGAGGCCAACTTTGCCGCTGTCGTCAACGTCGTTGTCATGGTTGTGTTTCCGGCGAGGCCAACGTTGTCGTCGTCGTTGTCATGGCTCTATAAAATTCCTGGCTTCGCCACTGGTCATGGTTGTGTTTCTGGCAAGGCTAATGTTGCCGTCGTCGTCATCATCTCTTCCGCCGTTATCGTTGTTGTCTTCGGCGAAGCCATCTTTTCCGTCGTTGTCATCGTGTCAAGAAATATTGATTTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGGTTTCTCAAGCTGTTTATGATGGAGGTCGACATGTGATTGGGGTTATTCCAAGGACACTGATGCCAAGAGAGATCACTGGAGAGACAGTGGGAGAAGTGAAGGCAGTAGCAGGCATGCATCAAAGAAAAGCTGAGATGGCCAAGCATTCTGATGCTTTTATTGCCTTACCAGGTGGCTATGGGACACTTGAGGAGCTTCTTGAGGTCATAACTTGGGCTCAACTTGGCATCCATGATAAACCAGTGGGATTGTTGAATGTAGATGGCTACTACAATTCTTTGTTATCTTTCATTGACAAAGCTGTGGAGGAAGGCTTCATTAGCCCTAAAGCTCGTCATATAATTGTATCTGCCCCATCAACAAAAGAGCTTGTCCAAAAGATGGAGGAATACTCTCCACAACATGAAAGAGTTGCATCTAAGCAAAGTTGGGAAACTGGGAAGCTGGATTAG

Protein sequence

>MsG0480020783.01.T01

MVAVSGEANFAAVVNVVVMVVFPARPTLSSSLSWLYKIPGFATGHGCVSGKANVAVVVIISSAVIVVVFGEAIFSVVVIVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPRTLMPREITGETVGEVKAVAGMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSAPSTKELVQKMEEYSPQHERVASKQSWETGKLD*