AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015145.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015145.01.T01 MTR_3g063950 68.170 377 41 4 1 349 1 326 8.49e-149 423
MsG0380015145.01.T01 MTR_3g063940 53.050 377 99 5 1 347 1 329 1.03e-102 306
MsG0380015145.01.T01 MTR_3g063940 51.186 295 94 4 1 293 1 247 1.17e-69 220
MsG0380015145.01.T01 MTR_7g114660 41.954 348 128 8 15 342 94 387 1.98e-57 192
MsG0380015145.01.T01 MTR_8g465010 48.649 222 71 3 121 342 204 382 6.07e-52 177
MsG0380015145.01.T01 MTR_8g031500 59.420 69 27 1 274 342 275 342 3.01e-16 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015145.01.T01 AT1G54520 43.243 222 83 3 121 342 210 388 5.13e-45 159

Find 85 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGGCTGGTGAGGTATTA+TGG 0.225096 3:-65870152 MsG0380015145.01.T01:intron
CTTTGCAGGTGGATCTTAAA+AGG 0.280869 3:-65872266 MsG0380015145.01.T01:intron
AGCTGCTAATACACGGTATA+AGG 0.310599 3:-65874440 MsG0380015145.01.T01:CDS
GAAGGGAGCTGAAGATTTAA+AGG 0.325037 3:-65870310 MsG0380015145.01.T01:CDS
GCCTCCTCAGGAGGTGTTGC+GGG 0.330241 3:-65874879 MsG0380015145.01.T01:CDS
ATTCAAATTCTCCAAGTGTA+TGG 0.331332 3:-65874791 MsG0380015145.01.T01:CDS
GCATCATCAGCATCACTAGA+AGG 0.337980 3:+65874744 None:intergenic
TTGATATACTTCTTGTTGTC+TGG 0.345708 3:-65872447 MsG0380015145.01.T01:CDS
TCTTCAGCTCCCTTCATGTT+AGG 0.359596 3:+65870318 None:intergenic
TTGTTCATTGCTGGCATAAT+CGG 0.364981 3:-65874681 MsG0380015145.01.T01:CDS
CCCTTTCTTCAATTGATAGT+TGG 0.380058 3:+65872214 None:intergenic
AGTTACTGTTCTCAAGCTTC+AGG 0.384139 3:-65874613 MsG0380015145.01.T01:intron
TACCTGTATAAACAGTTAAT+AGG 0.399358 3:+65873672 None:intergenic
TGATTCAGAGGATGATTTAG+AGG 0.401140 3:+65874824 None:intergenic
TGAAGCTTGAGAACAGTAAC+TGG 0.404982 3:+65874615 None:intergenic
AGCTTAAATCCCTTCTCTAC+TGG 0.408193 3:-65870275 MsG0380015145.01.T01:CDS
TTTGTTTAAGGTTGGAATGT+TGG 0.409336 3:-65874509 MsG0380015145.01.T01:intron
CATTTCATATTTCATAGACT+TGG 0.414063 3:+65870065 None:intergenic
ATCCTATTAACTGTTTATAC+AGG 0.419345 3:-65873674 MsG0380015145.01.T01:intron
CCTATGTTAGGTAACAATAT+TGG 0.429417 3:-65870367 MsG0380015145.01.T01:intron
AACTCAGTTTCAGCCTCCTC+AGG 0.433204 3:-65874891 MsG0380015145.01.T01:CDS
GCTTTCTCTATGAGTGGAGG+TGG 0.439122 3:-65873698 MsG0380015145.01.T01:CDS
GGTTGGAATGTTGGATGAGA+TGG 0.439180 3:-65874500 MsG0380015145.01.T01:CDS
AACAGAGACAATACAAACTT+TGG 0.439999 3:-65872416 MsG0380015145.01.T01:CDS
CAAAGATAAATTCAATTGCT+AGG 0.440794 3:+65869994 None:intergenic
GGGTGTCATCCTCTTTCTGT+GGG 0.443126 3:+65870127 None:intergenic
AGAGGATGATTTAGAGGATG+AGG 0.443481 3:+65874830 None:intergenic
ACCAACTATCAATTGAAGAA+AGG 0.462903 3:-65872215 MsG0380015145.01.T01:CDS
CCAACTATCAATTGAAGAAA+GGG 0.475889 3:-65872214 MsG0380015145.01.T01:CDS
CATCATGGTTACTGTATAGC+AGG 0.483872 3:-65872388 MsG0380015145.01.T01:CDS
CTCACTGCTTTCTCTATGAG+TGG 0.484912 3:-65873704 MsG0380015145.01.T01:CDS
AGCCTCCTCAGGAGGTGTTG+CGG 0.492206 3:-65874880 MsG0380015145.01.T01:CDS
CAAACTTTGGATAAACATCA+TGG 0.498262 3:-65872403 MsG0380015145.01.T01:CDS
TGCTAAACTTATCATAACTC+TGG 0.498309 3:+65872130 None:intergenic
TCCTCAGGAGGTGTTGCGGG+AGG 0.500511 3:-65874876 MsG0380015145.01.T01:CDS
AGGGTGTCATCCTCTTTCTG+TGG 0.504682 3:+65870126 None:intergenic
AGGAGGCTGAAACTGAGTTA+AGG 0.510377 3:+65874895 None:intergenic
CATCATCAGCATCACTAGAA+GGG 0.510641 3:+65874745 None:intergenic
TTCAAATTCTCCAAGTGTAT+GGG 0.512876 3:-65874790 MsG0380015145.01.T01:CDS
TGCTGATGATGCTGATGATA+AGG 0.519261 3:-65874733 MsG0380015145.01.T01:CDS
CCCTCCCGCAACACCTCCTG+AGG 0.524621 3:+65874875 None:intergenic
ATAGATCTCTCCAGTAGAGA+AGG 0.524728 3:+65870265 None:intergenic
ATTATGGACCCCACAGAAAG+AGG 0.525005 3:-65870136 MsG0380015145.01.T01:CDS
GATGGGATGTACATTACAAA+GGG 0.528262 3:-65874482 MsG0380015145.01.T01:CDS
TCCCGCAACACCTCCTGAGG+AGG 0.529539 3:+65874878 None:intergenic
GATAAGGTTACAAATGATGA+AGG 0.532218 3:-65874717 MsG0380015145.01.T01:CDS
CATTACAAAGGGATCTAGCT+AGG 0.535268 3:-65874471 MsG0380015145.01.T01:CDS
TGTATTGTCTCTGTTACAGA+AGG 0.535664 3:+65872424 None:intergenic
TTCATAGACTTGGCTAGCTG+AGG 0.537152 3:+65870075 None:intergenic
CCTCAGGAGGTGTTGCGGGA+GGG 0.546260 3:-65874875 MsG0380015145.01.T01:CDS
GTTGGAATGTTGGATGAGAT+GGG 0.546768 3:-65874499 MsG0380015145.01.T01:CDS
GAAATTCTTTCAGGCTGGTG+AGG 0.547725 3:-65870160 MsG0380015145.01.T01:intron
GAGGATGACACCCTTTCAGA+TGG 0.549775 3:-65870117 MsG0380015145.01.T01:CDS
ATGCAGATGGTTTGAGTGGA+GGG 0.555357 3:-65873734 MsG0380015145.01.T01:intron
GGTGGATCTTAAAAGGAGCC+AGG 0.555856 3:-65872259 MsG0380015145.01.T01:CDS
TCATAGACTTGGCTAGCTGA+GGG 0.559467 3:+65870076 None:intergenic
ATAAACAAGTGGGTAATGCT+TGG 0.562590 3:-65870041 MsG0380015145.01.T01:CDS
TGATGTTGCACCCATACACT+TGG 0.564612 3:+65874780 None:intergenic
AAGGTTACAAATGATGAAGG+AGG 0.565019 3:-65874714 MsG0380015145.01.T01:CDS
ATCACTAGAAGGGGTAACAT+AGG 0.569608 3:+65874755 None:intergenic
ACATAAGCTACCTAACATGA+AGG 0.574557 3:-65870328 MsG0380015145.01.T01:CDS
TATGAAATGAATAAACAAGT+GGG 0.578318 3:-65870051 MsG0380015145.01.T01:CDS
TGTCATGCAGATGGTTTGAG+TGG 0.589501 3:-65873738 MsG0380015145.01.T01:intron
CTTTCTCTATGAGTGGAGGT+GGG 0.590914 3:-65873697 MsG0380015145.01.T01:CDS
AGATGGGATGTACATTACAA+AGG 0.592518 3:-65874483 MsG0380015145.01.T01:CDS
TAGATCTCTCCAGTAGAGAA+GGG 0.599653 3:+65870266 None:intergenic
ATCATCAGCATCACTAGAAG+GGG 0.601364 3:+65874746 None:intergenic
GGTTACAAATGATGAAGGAG+GGG 0.602074 3:-65874712 MsG0380015145.01.T01:CDS
GATCTTAAAAGGAGCCAGGA+GGG 0.605501 3:-65872255 MsG0380015145.01.T01:CDS
AGGTTACAAATGATGAAGGA+GGG 0.613385 3:-65874713 MsG0380015145.01.T01:CDS
CTTAAAAGGAGCCAGGAGGG+TGG 0.619800 3:-65872252 MsG0380015145.01.T01:CDS
ATATGAAATGAATAAACAAG+TGG 0.621892 3:-65870052 MsG0380015145.01.T01:CDS
ACTGCTTTCTCTATGAGTGG+AGG 0.624916 3:-65873701 MsG0380015145.01.T01:CDS
GTTTAGCAATGAATATTCCA+CGG 0.627209 3:-65872115 MsG0380015145.01.T01:intron
GCTAATACACGGTATAAGGA+AGG 0.628417 3:-65874436 MsG0380015145.01.T01:CDS
TCAGTTTCAGCCTCCTCAGG+AGG 0.630087 3:-65874888 MsG0380015145.01.T01:CDS
TTGCAGAAGCTGCTAATACA+CGG 0.637222 3:-65874447 MsG0380015145.01.T01:CDS
TTGTGTTGTTATCATTAACA+TGG 0.637242 3:-65874920 MsG0380015145.01.T01:CDS
ACAATATTGGTAGCTACTAG+AGG 0.643540 3:-65870354 MsG0380015145.01.T01:CDS
CATGCAGATGGTTTGAGTGG+AGG 0.646575 3:-65873735 MsG0380015145.01.T01:intron
ATAAGTTGTGAATGATTCAG+AGG 0.648863 3:+65874812 None:intergenic
CATAAGCTACCTAACATGAA+GGG 0.659099 3:-65870327 MsG0380015145.01.T01:CDS
GGCGTGTGCTGTTTATTGAG+AGG 0.672280 3:-65874415 MsG0380015145.01.T01:intron
GGTGTCATCCTCTTTCTGTG+GGG 0.672684 3:+65870128 None:intergenic
GGATCTTAAAAGGAGCCAGG+AGG 0.690908 3:-65872256 MsG0380015145.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATAAAATCATTCT+TGG + Chr3:65872403-65872422 None:intergenic 10.0%
!! AATTTATTTATATACAACTT+TGG - Chr3:65870535-65870554 MsG0380015145.01.T01:intron 10.0%
!! ATCTACTAAAAAAATTAAAA+TGG + Chr3:65873804-65873823 None:intergenic 10.0%
!! GTATTAAATTTACTTACAAT+TGG + Chr3:65871914-65871933 None:intergenic 15.0%
!!! ATATTACCTTATATTTTGTT+TGG - Chr3:65874319-65874338 MsG0380015145.01.T01:intron 15.0%
!!! ATTGTTTTATTTTTTTGAGT+TGG - Chr3:65873486-65873505 MsG0380015145.01.T01:intron 15.0%
!!! ATTTTGTAAAAGCAATTAAA+GGG - Chr3:65872824-65872843 MsG0380015145.01.T01:intron 15.0%
!!! TACATAATTTTCTTAATTTG+TGG - Chr3:65874422-65874441 MsG0380015145.01.T01:CDS 15.0%
!!! TTTTTTTTTCAAATTGTACA+AGG - Chr3:65872415-65872434 MsG0380015145.01.T01:CDS 15.0%
!! AGATATGAAATGAGTTTATA+AGG - Chr3:65872072-65872091 MsG0380015145.01.T01:intron 20.0%
!! ATATGAAATGAATAAACAAG+TGG - Chr3:65874843-65874862 MsG0380015145.01.T01:CDS 20.0%
!! ATTTGAAGATATCAAACATT+AGG + Chr3:65874074-65874093 None:intergenic 20.0%
!! CAAACAAGGATAAAATATTA+TGG + Chr3:65873707-65873726 None:intergenic 20.0%
!! GGTATGATATAATTAACTTT+GGG - Chr3:65873455-65873474 MsG0380015145.01.T01:intron 20.0%
!! TAAATCCTCAATTAAACATA+AGG - Chr3:65874093-65874112 MsG0380015145.01.T01:intron 20.0%
!! TATGAAATGAATAAACAAGT+GGG - Chr3:65874844-65874863 MsG0380015145.01.T01:CDS 20.0%
!! TGGTATGATATAATTAACTT+TGG - Chr3:65873454-65873473 MsG0380015145.01.T01:intron 20.0%
!! TTAAAAATTATATCATACCG+TGG + Chr3:65872800-65872819 None:intergenic 20.0%
!!! AAGCATATTTTAGAGTTTAA+TGG + Chr3:65873021-65873040 None:intergenic 20.0%
!!! GATTTTGTAAAAGCAATTAA+AGG - Chr3:65872823-65872842 MsG0380015145.01.T01:intron 20.0%
!!! TATTTATCTAAGATAATCCA+AGG + Chr3:65874263-65874282 None:intergenic 20.0%
!!! TGTTAGTCAAGTAATTTTAA+TGG + Chr3:65870807-65870826 None:intergenic 20.0%
!!! TTATTTTGAAACAAATAGTG+TGG - Chr3:65872930-65872949 MsG0380015145.01.T01:intron 20.0%
!!! TTTCTCTTTTTCAAATTTCT+CGG + Chr3:65873403-65873422 None:intergenic 20.0%
!!! TTTTATTCAACGTAAGAATT+GGG + Chr3:65872240-65872259 None:intergenic 20.0%
!!! TTTTTATTCAACGTAAGAAT+TGG + Chr3:65872241-65872260 None:intergenic 20.0%
! AAAACTTATTCCATAAAGTG+GGG - Chr3:65870843-65870862 MsG0380015145.01.T01:intron 25.0%
! AAAATAACCATACAGAAATG+GGG + Chr3:65872917-65872936 None:intergenic 25.0%
! AAATCATTCTTGGCTAAAAA+TGG + Chr3:65872393-65872412 None:intergenic 25.0%
! ATCCTATTAACTGTTTATAC+AGG - Chr3:65871221-65871240 MsG0380015145.01.T01:intron 25.0%
! ATTAACTGTTTATACAGGTA+AGG - Chr3:65871226-65871245 MsG0380015145.01.T01:intron 25.0%
! ATTCAATTGCTAGGAAAAAA+AGG + Chr3:65874895-65874914 None:intergenic 25.0%
! CAAAACTTATTCCATAAAGT+GGG - Chr3:65870842-65870861 MsG0380015145.01.T01:intron 25.0%
! CAAAATAACCATACAGAAAT+GGG + Chr3:65872918-65872937 None:intergenic 25.0%
! CAAAGATAAATTCAATTGCT+AGG + Chr3:65874904-65874923 None:intergenic 25.0%
! CATTTCATATTTCATAGACT+TGG + Chr3:65874833-65874852 None:intergenic 25.0%
! CTATAACTCAAATTGTACTT+CGG + Chr3:65872570-65872589 None:intergenic 25.0%
! GAATATAGTCAAAGTAGTAA+AGG + Chr3:65873832-65873851 None:intergenic 25.0%
! GACCAAAATAATATTACTTG+GGG + Chr3:65872371-65872390 None:intergenic 25.0%
! GATAGCAGATATAGAATTAA+AGG + Chr3:65873524-65873543 None:intergenic 25.0%
! GGACCAAAATAATATTACTT+GGG + Chr3:65872372-65872391 None:intergenic 25.0%
! TACCTGTATAAACAGTTAAT+AGG + Chr3:65871226-65871245 None:intergenic 25.0%
! TATAACCTTGAAATTCTTTC+AGG - Chr3:65874726-65874745 MsG0380015145.01.T01:CDS 25.0%
! TCAAAATAACCATACAGAAA+TGG + Chr3:65872919-65872938 None:intergenic 25.0%
! TCAACTTCAATTTCAACTAT+TGG - Chr3:65873273-65873292 MsG0380015145.01.T01:intron 25.0%
! TGATTTCAAAGCCATTAAAA+AGG + Chr3:65873126-65873145 None:intergenic 25.0%
! TGGACCAAAATAATATTACT+TGG + Chr3:65872373-65872392 None:intergenic 25.0%
! TGTTAGTCAAGTAATTTGAA+TGG + Chr3:65870771-65870790 None:intergenic 25.0%
! TTACTCCTTATGTTTAATTG+AGG + Chr3:65874101-65874120 None:intergenic 25.0%
! TTCTTATTACATGTAACCTA+TGG - Chr3:65874448-65874467 MsG0380015145.01.T01:CDS 25.0%
! TTCTTGTGTTATAGTGAAAA+TGG - Chr3:65872004-65872023 MsG0380015145.01.T01:intron 25.0%
!! ACTATTCATGCAATATTTTC+TGG - Chr3:65874137-65874156 MsG0380015145.01.T01:intron 25.0%
!! TTGTGTTGTTATCATTAACA+TGG - Chr3:65869975-65869994 MsG0380015145.01.T01:three_prime_UTR 25.0%
!! TTTGAGTTATAGCCTATAAT+AGG - Chr3:65872578-65872597 MsG0380015145.01.T01:intron 25.0%
!!! ACCTTATATTTTGTTTGGAT+TGG - Chr3:65874324-65874343 MsG0380015145.01.T01:intron 25.0%
!!! CATTTTGATATAGATTGTTG+AGG - Chr3:65871006-65871025 MsG0380015145.01.T01:intron 25.0%
!!! CCTTATATTTTGTTTGGATT+GGG - Chr3:65874325-65874344 MsG0380015145.01.T01:intron 25.0%
!!! GTTTTTGTGTCTTTTGTTTA+AGG - Chr3:65870374-65870393 MsG0380015145.01.T01:intron 25.0%
!!! TAGTTTTTGGAAAATCATGT+TGG - Chr3:65873584-65873603 MsG0380015145.01.T01:intron 25.0%
!!! TTTATGGAATAAGTTTTGGT+TGG + Chr3:65870840-65870859 None:intergenic 25.0%
AAACAGCTCAAAATAACCTA+GGG + Chr3:65871727-65871746 None:intergenic 30.0%
AACAGAGACAATACAAACTT+TGG - Chr3:65872479-65872498 MsG0380015145.01.T01:intron 30.0%
AACATCGCATTGTTAAAACA+TGG + Chr3:65873746-65873765 None:intergenic 30.0%
AATACGTCATATTACACTAC+AGG + Chr3:65871790-65871809 None:intergenic 30.0%
AATCCTTGAGATATTCACAA+AGG - Chr3:65874398-65874417 MsG0380015145.01.T01:intron 30.0%
AATTAAAGGGTAGGTACTTA+CGG - Chr3:65872837-65872856 MsG0380015145.01.T01:intron 30.0%
AATTCTATATCTGCTATCAG+CGG - Chr3:65873526-65873545 MsG0380015145.01.T01:intron 30.0%
AATTGTACTTCGGACTAATT+AGG + Chr3:65872560-65872579 None:intergenic 30.0%
ACCAACTATCAATTGAAGAA+AGG - Chr3:65872680-65872699 MsG0380015145.01.T01:intron 30.0%
AGAGGTAAGAAATAAAGGAA+GGG - Chr3:65871039-65871058 MsG0380015145.01.T01:intron 30.0%
AGCATTAAGAAAGTTTGTAG+TGG + Chr3:65871936-65871955 None:intergenic 30.0%
AGCCTATAATAGGTGTTAAA+GGG - Chr3:65872588-65872607 MsG0380015145.01.T01:intron 30.0%
AGGATAAAATATTATGGCGT+TGG + Chr3:65873701-65873720 None:intergenic 30.0%
ATAAGTTGTGAATGATTCAG+AGG + Chr3:65870086-65870105 None:intergenic 30.0%
ATTCAAATTCTCCAAGTGTA+TGG - Chr3:65870104-65870123 MsG0380015145.01.T01:CDS 30.0%
ATTCTTACAAAATTGACGGA+AGG + Chr3:65872110-65872129 None:intergenic 30.0%
ATTGGTATCACATTAGAACA+TGG + Chr3:65873954-65873973 None:intergenic 30.0%
ATTGGTATCACATTAGAGTA+TGG + Chr3:65873931-65873950 None:intergenic 30.0%
CAAACTTTGGATAAACATCA+TGG - Chr3:65872492-65872511 MsG0380015145.01.T01:intron 30.0%
CCAAAACTTATTCCATAAAG+TGG - Chr3:65870841-65870860 MsG0380015145.01.T01:intron 30.0%
CCAACTATCAATTGAAGAAA+GGG - Chr3:65872681-65872700 MsG0380015145.01.T01:intron 30.0%
CCAATATTGTTACCTAACAT+AGG + Chr3:65874531-65874550 None:intergenic 30.0%
CCCAATCCAAACAAAATATA+AGG + Chr3:65874328-65874347 None:intergenic 30.0%
CCTATGTTAGGTAACAATAT+TGG - Chr3:65874528-65874547 MsG0380015145.01.T01:intron 30.0%
GAAGAAAGGGAAAAATTTGA+TGG - Chr3:65872694-65872713 MsG0380015145.01.T01:intron 30.0%
GATAAGGTTACAAATGATGA+AGG - Chr3:65870178-65870197 MsG0380015145.01.T01:intron 30.0%
GATTGTATTTGTGAATGAAG+TGG - Chr3:65871116-65871135 MsG0380015145.01.T01:intron 30.0%
GCTCATTCTTACAAAATTGA+CGG + Chr3:65872114-65872133 None:intergenic 30.0%
GGATAAAATATTATGGCGTT+GGG + Chr3:65873700-65873719 None:intergenic 30.0%
GTAAGAAGTCAAAATACCAT+AGG + Chr3:65874467-65874486 None:intergenic 30.0%
GTTTAGCAATGAATATTCCA+CGG - Chr3:65872780-65872799 MsG0380015145.01.T01:intron 30.0%
TAGAGGTAAGAAATAAAGGA+AGG - Chr3:65871038-65871057 MsG0380015145.01.T01:intron 30.0%
TAGCCTATAATAGGTGTTAA+AGG - Chr3:65872587-65872606 MsG0380015145.01.T01:intron 30.0%
TAGGTAGAGGTAAGAAATAA+AGG - Chr3:65871034-65871053 MsG0380015145.01.T01:intron 30.0%
TATCACATTAGAACATGGAT+TGG + Chr3:65873949-65873968 None:intergenic 30.0%
TCCATAAGTATATGTCTGTT+GGG - Chr3:65870718-65870737 MsG0380015145.01.T01:intron 30.0%
TCTTTGTAAAAAGTAGCAGT+TGG - Chr3:65874918-65874937 MsG0380015145.01.T01:CDS 30.0%
TGAAACGAGTTTATAAGTAG+TGG - Chr3:65872268-65872287 MsG0380015145.01.T01:intron 30.0%
TGCTAAACTTATCATAACTC+TGG + Chr3:65872768-65872787 None:intergenic 30.0%
TGGACATAAGTATACTACAT+TGG + Chr3:65873972-65873991 None:intergenic 30.0%
TGTAAAAGCAATTAAAGGGT+AGG - Chr3:65872828-65872847 MsG0380015145.01.T01:intron 30.0%
TGTACAAGTAATGTTCTCAA+AGG + Chr3:65874036-65874055 None:intergenic 30.0%
TTCAAATTCTCCAAGTGTAT+GGG - Chr3:65870105-65870124 MsG0380015145.01.T01:CDS 30.0%
TTCTTACAAAATTGACGGAA+GGG + Chr3:65872109-65872128 None:intergenic 30.0%
TTGATATAGATTGTTGAGGT+GGG - Chr3:65871010-65871029 MsG0380015145.01.T01:intron 30.0%
TTTGATATAGATTGTTGAGG+TGG - Chr3:65871009-65871028 MsG0380015145.01.T01:intron 30.0%
! AAGAATTTTCTGTGCATGTT+TGG + Chr3:65873632-65873651 None:intergenic 30.0%
! AAGCTATGCTATGTAGTTTT+TGG - Chr3:65873571-65873590 MsG0380015145.01.T01:intron 30.0%
! AAGGGGAAAATTTAGGATTA+TGG - Chr3:65871624-65871643 MsG0380015145.01.T01:intron 30.0%
! AAGTAGTTTTCCATCTGAAA+GGG + Chr3:65874791-65874810 None:intergenic 30.0%
! AGCCCCAAGTAATATTATTT+TGG - Chr3:65872366-65872385 MsG0380015145.01.T01:intron 30.0%
! ATGATTTGGAAGACAAGAAA+TGG - Chr3:65871093-65871112 MsG0380015145.01.T01:intron 30.0%
! CCACTTTATGGAATAAGTTT+TGG + Chr3:65870844-65870863 None:intergenic 30.0%
! CGTATTTTCTTTTTGTTGCA+TGG - Chr3:65871804-65871823 MsG0380015145.01.T01:intron 30.0%
! GTACAACTTTTGTACACTAA+CGG - Chr3:65870651-65870670 MsG0380015145.01.T01:intron 30.0%
! TAAGTAGTTTTCCATCTGAA+AGG + Chr3:65874792-65874811 None:intergenic 30.0%
! TAATTTGGAATGCTACACTT+TGG - Chr3:65871070-65871089 MsG0380015145.01.T01:intron 30.0%
! TAGTTTGTAGGTGTGATTTA+TGG - Chr3:65871470-65871489 MsG0380015145.01.T01:intron 30.0%
! TATTTGAGATGTCCTATGTT+AGG - Chr3:65874516-65874535 MsG0380015145.01.T01:intron 30.0%
! TGATTTGGAAGACAAGAAAT+GGG - Chr3:65871094-65871113 MsG0380015145.01.T01:intron 30.0%
! TTAAACTTTTGTCATGCAGA+TGG - Chr3:65871148-65871167 MsG0380015145.01.T01:intron 30.0%
! TTGATATACTTCTTGTTGTC+TGG - Chr3:65872448-65872467 MsG0380015145.01.T01:CDS 30.0%
! TTTCTGTTTTGTAGCTAGTT+TGG - Chr3:65871744-65871763 MsG0380015145.01.T01:intron 30.0%
! TTTGTTTAAGGTTGGAATGT+TGG - Chr3:65870386-65870405 MsG0380015145.01.T01:intron 30.0%
!! AAGTTATATGTTGACTTTCG+AGG - Chr3:65870886-65870905 MsG0380015145.01.T01:intron 30.0%
!! CAACATCTTTTTAGTCTAAG+TGG - Chr3:65874372-65874391 MsG0380015145.01.T01:intron 30.0%
!! CAATAACTTTATACCGATTC+CGG - Chr3:65871852-65871871 MsG0380015145.01.T01:intron 30.0%
!! CTTCAATTTCTAGTGATATG+CGG - Chr3:65873038-65873057 MsG0380015145.01.T01:intron 30.0%
!! TTCAATTTCTAGTGATATGC+GGG - Chr3:65873039-65873058 MsG0380015145.01.T01:intron 30.0%
!! TTGTGTCTTTTGTTTAAGGT+TGG - Chr3:65870378-65870397 MsG0380015145.01.T01:intron 30.0%
!!! GTTTCTGTAGCTGTTTTTTT+CGG - Chr3:65871400-65871419 MsG0380015145.01.T01:intron 30.0%
AACACAAGTCTCACATTGAA+TGG - Chr3:65872044-65872063 MsG0380015145.01.T01:intron 35.0%
AACTGTCCTGCACTAAAATA+AGG + Chr3:65871529-65871548 None:intergenic 35.0%
AAGGTTACAAATGATGAAGG+AGG - Chr3:65870181-65870200 MsG0380015145.01.T01:intron 35.0%
ACATAAGCTACCTAACATGA+AGG - Chr3:65874567-65874586 MsG0380015145.01.T01:intron 35.0%
ACCCCTTTAACACCTATTAT+AGG + Chr3:65872593-65872612 None:intergenic 35.0%
ACCTATAAGTTAGCTGTGTA+AGG - Chr3:65872299-65872318 MsG0380015145.01.T01:intron 35.0%
AGATGGGATGTACATTACAA+AGG - Chr3:65870412-65870431 MsG0380015145.01.T01:intron 35.0%
AGCCATTAAAAGAGAACTGA+AGG + Chr3:65873117-65873136 None:intergenic 35.0%
AGCGTATGGTTCATTGTTAA+GGG - Chr3:65874188-65874207 MsG0380015145.01.T01:intron 35.0%
AGGTTACAAATGATGAAGGA+GGG - Chr3:65870182-65870201 MsG0380015145.01.T01:intron 35.0%
AGTTGTACACATGCATTCAA+TGG + Chr3:65870639-65870658 None:intergenic 35.0%
ATAAACAAGTGGGTAATGCT+TGG - Chr3:65874854-65874873 MsG0380015145.01.T01:CDS 35.0%
ATGCTACACTTTGGATGATT+TGG - Chr3:65871079-65871098 MsG0380015145.01.T01:intron 35.0%
ATTAGAGAGAGAGAACCATA+TGG - Chr3:65874289-65874308 MsG0380015145.01.T01:intron 35.0%
ATTCTATATCTGCTATCAGC+GGG - Chr3:65873527-65873546 MsG0380015145.01.T01:intron 35.0%
ATTGATATAGATTGTCGAGG+TGG - Chr3:65870963-65870982 MsG0380015145.01.T01:intron 35.0%
CAACGAGATTCTATATTGAC+TGG - Chr3:65871967-65871986 MsG0380015145.01.T01:intron 35.0%
CACATTGATATAGATTGTCG+AGG - Chr3:65870960-65870979 MsG0380015145.01.T01:intron 35.0%
CACATTTGTCAACGCATTAT+TGG + Chr3:65870585-65870604 None:intergenic 35.0%
CATAAGCTACCTAACATGAA+GGG - Chr3:65874568-65874587 MsG0380015145.01.T01:intron 35.0%
CTACTGCATTCACAAGTAAT+TGG + Chr3:65873992-65874011 None:intergenic 35.0%
GAAACAGCTCAAAATAACCT+AGG + Chr3:65871728-65871747 None:intergenic 35.0%
GAGGTAAGAAATAAAGGAAG+GGG - Chr3:65871040-65871059 MsG0380015145.01.T01:intron 35.0%
GATGGGATGTACATTACAAA+GGG - Chr3:65870413-65870432 MsG0380015145.01.T01:intron 35.0%
GCCATTAAAAGAGAACTGAA+GGG + Chr3:65873116-65873135 None:intergenic 35.0%
GCCTATAATAGGTGTTAAAG+GGG - Chr3:65872589-65872608 MsG0380015145.01.T01:intron 35.0%
GGTAATATTGAACCACCATA+TGG + Chr3:65874307-65874326 None:intergenic 35.0%
GTATCACATTAGAGTATGGA+AGG + Chr3:65873927-65873946 None:intergenic 35.0%
GTCCATAAGTATATGTCTGT+TGG - Chr3:65870717-65870736 MsG0380015145.01.T01:intron 35.0%
TAGCCTTTGTGAATATCTCA+AGG + Chr3:65874404-65874423 None:intergenic 35.0%
TAGCGTATGGTTCATTGTTA+AGG - Chr3:65874187-65874206 MsG0380015145.01.T01:intron 35.0%
TATAAGTTAGCTGTGTAAGG+AGG - Chr3:65872302-65872321 MsG0380015145.01.T01:intron 35.0%
TATGGTTCTCTCTCTCTAAT+TGG + Chr3:65874289-65874308 None:intergenic 35.0%
TCCCAACAGACATATACTTA+TGG + Chr3:65870722-65870741 None:intergenic 35.0%
TCCTTACACAGCTAACTTAT+AGG + Chr3:65872303-65872322 None:intergenic 35.0%
TCTGTGGTAGTATCATTTGA+CGG - Chr3:65871560-65871579 MsG0380015145.01.T01:intron 35.0%
TGATATAGATTGTTGAGGTG+GGG - Chr3:65871011-65871030 MsG0380015145.01.T01:intron 35.0%
TGATTCAGAGGATGATTTAG+AGG + Chr3:65870074-65870093 None:intergenic 35.0%
TGGTGTAAAGGGGAAAATTT+AGG - Chr3:65871617-65871636 MsG0380015145.01.T01:intron 35.0%
TGTATTGTCTCTGTTACAGA+AGG + Chr3:65872474-65872493 None:intergenic 35.0%
TGTTTATACAGGTAAGGACT+GGG - Chr3:65871232-65871251 MsG0380015145.01.T01:intron 35.0%
TTACGCTCACATTCAATGAA+AGG + Chr3:65872972-65872991 None:intergenic 35.0%
TTCCCCTTTACACCATAAAA+AGG + Chr3:65871612-65871631 None:intergenic 35.0%
TTGAAACAAATAGTGTGGCA+TGG - Chr3:65872935-65872954 MsG0380015145.01.T01:intron 35.0%
TTGATATAGATTGTCGAGGT+GGG - Chr3:65870964-65870983 MsG0380015145.01.T01:intron 35.0%
TTGTTCATTGCTGGCATAAT+CGG - Chr3:65870214-65870233 MsG0380015145.01.T01:intron 35.0%
! ACAATATTGGTAGCTACTAG+AGG - Chr3:65874541-65874560 MsG0380015145.01.T01:intron 35.0%
! ACCCTTCAGTTCTCTTTTAA+TGG - Chr3:65873112-65873131 MsG0380015145.01.T01:intron 35.0%
! CACTGCAGAAACCTTTTTAA+TGG - Chr3:65873151-65873170 MsG0380015145.01.T01:intron 35.0%
! CCCTTTCTTCAATTGATAGT+TGG + Chr3:65872684-65872703 None:intergenic 35.0%
! CTGCCTTTTTATGGTGTAAA+GGG - Chr3:65871606-65871625 MsG0380015145.01.T01:intron 35.0%
! GGTTTTTACTAGGTGGAAAA+TGG - Chr3:65873081-65873100 MsG0380015145.01.T01:intron 35.0%
! TATCCTTGTTTGCTCAGTAA+TGG - Chr3:65873715-65873734 MsG0380015145.01.T01:CDS 35.0%
! TGAAGCATTCATATAGCGTA+TGG - Chr3:65874174-65874193 MsG0380015145.01.T01:intron 35.0%
! TGCCTTTTTATGGTGTAAAG+GGG - Chr3:65871607-65871626 MsG0380015145.01.T01:intron 35.0%
! TTCACTGCAGAAACTTTTCA+CGG - Chr3:65873216-65873235 MsG0380015145.01.T01:intron 35.0%
! TTTTTATCCAGTCTCAAGTC+CGG + Chr3:65870935-65870954 None:intergenic 35.0%
!!! CTCTAGTTTTTAAGTGTAGC+AGG - Chr3:65871443-65871462 MsG0380015145.01.T01:intron 35.0%
AAAAAGAGAAACCTCGCAGT+GGG - Chr3:65873412-65873431 MsG0380015145.01.T01:intron 40.0%
AATCGAACACGAGACAAATC+CGG + Chr3:65871874-65871893 None:intergenic 40.0%
ACCAGCCTGAAAGAATTTCA+AGG + Chr3:65874734-65874753 None:intergenic 40.0%
ACCTGCAAAGATTGTCATCA+AGG + Chr3:65872619-65872638 None:intergenic 40.0%
ACCTTGAAATTCTTTCAGGC+TGG - Chr3:65874730-65874749 MsG0380015145.01.T01:CDS 40.0%
ACTTCGGACTAATTAGGAGA+AGG + Chr3:65872554-65872573 None:intergenic 40.0%
AGAAATAAAGGAAGGGGATC+TGG - Chr3:65871046-65871065 MsG0380015145.01.T01:intron 40.0%
AGAGGATGATTTAGAGGATG+AGG + Chr3:65870068-65870087 None:intergenic 40.0%
AGCTGCTAATACACGGTATA+AGG - Chr3:65870455-65870474 MsG0380015145.01.T01:intron 40.0%
AGCTTAAATCCCTTCTCTAC+TGG - Chr3:65874620-65874639 MsG0380015145.01.T01:CDS 40.0%
AGTTACTGTTCTCAAGCTTC+AGG - Chr3:65870282-65870301 MsG0380015145.01.T01:CDS 40.0%
ATAAAAAGGCAGCAGAAGAC+AGG + Chr3:65871598-65871617 None:intergenic 40.0%
ATACTTATGGACAGAAGCAG+AGG + Chr3:65870709-65870728 None:intergenic 40.0%
ATAGATCTCTCCAGTAGAGA+AGG + Chr3:65874633-65874652 None:intergenic 40.0%
ATCAAACTGCAGAAGACTAG+TGG + Chr3:65873358-65873377 None:intergenic 40.0%
ATCACTAGAAGGGGTAACAT+AGG + Chr3:65870143-65870162 None:intergenic 40.0%
ATCATCAGCATCACTAGAAG+GGG + Chr3:65870152-65870171 None:intergenic 40.0%
ATTGACCCATCAGAAAAGCT+AGG + Chr3:65871836-65871855 None:intergenic 40.0%
ATTTGAAAGCAGTAGGGTCA+AGG - Chr3:65874234-65874253 MsG0380015145.01.T01:intron 40.0%
CATCATCAGCATCACTAGAA+GGG + Chr3:65870153-65870172 None:intergenic 40.0%
CATCATGGTTACTGTATAGC+AGG - Chr3:65872507-65872526 MsG0380015145.01.T01:intron 40.0%
CATTACAAAGGGATCTAGCT+AGG - Chr3:65870424-65870443 MsG0380015145.01.T01:intron 40.0%
CCTGCAAAGATTGTCATCAA+GGG + Chr3:65872618-65872637 None:intergenic 40.0%
CTATAGTCAACCCCACTTTA+TGG + Chr3:65870856-65870875 None:intergenic 40.0%
CTGTTTATACAGGTAAGGAC+TGG - Chr3:65871231-65871250 MsG0380015145.01.T01:intron 40.0%
CTTTGCAGGTGGATCTTAAA+AGG - Chr3:65872629-65872648 MsG0380015145.01.T01:intron 40.0%
GAAGGGAGCTGAAGATTTAA+AGG - Chr3:65874585-65874604 MsG0380015145.01.T01:intron 40.0%
GATCCATTACTGAGCAAACA+AGG + Chr3:65873721-65873740 None:intergenic 40.0%
GATTTGTCTCGTGTTCGATT+TGG - Chr3:65871874-65871893 MsG0380015145.01.T01:intron 40.0%
GCTAATACACGGTATAAGGA+AGG - Chr3:65870459-65870478 MsG0380015145.01.T01:intron 40.0%
GGTTACAAATGATGAAGGAG+GGG - Chr3:65870183-65870202 MsG0380015145.01.T01:intron 40.0%
GTCTGCATTTGAAAGCAGTA+GGG - Chr3:65874228-65874247 MsG0380015145.01.T01:intron 40.0%
GTTCGACAACAAGTACATAG+TGG - Chr3:65873434-65873453 MsG0380015145.01.T01:intron 40.0%
GTTGGAATGTTGGATGAGAT+GGG - Chr3:65870396-65870415 MsG0380015145.01.T01:intron 40.0%
TAAAAGAGAACTGAAGGGTG+AGG + Chr3:65873111-65873130 None:intergenic 40.0%
TAACAATGCGATGTTGCAAG+TGG - Chr3:65873751-65873770 MsG0380015145.01.T01:intron 40.0%
TACAAAATTGACGGAAGGGT+GGG + Chr3:65872105-65872124 None:intergenic 40.0%
TAGATCTCTCCAGTAGAGAA+GGG + Chr3:65874632-65874651 None:intergenic 40.0%
TAGTAAAAACCTCACGAGAG+AGG + Chr3:65873072-65873091 None:intergenic 40.0%
TGAAGCTTGAGAACAGTAAC+TGG + Chr3:65870283-65870302 None:intergenic 40.0%
TGATATAGATTGTCGAGGTG+GGG - Chr3:65870965-65870984 MsG0380015145.01.T01:intron 40.0%
TGTCTGCATTTGAAAGCAGT+AGG - Chr3:65874227-65874246 MsG0380015145.01.T01:intron 40.0%
TTACAAAATTGACGGAAGGG+TGG + Chr3:65872106-65872125 None:intergenic 40.0%
TTGACCCATCAGAAAAGCTA+GGG + Chr3:65871835-65871854 None:intergenic 40.0%
TTGCAGAAGCTGCTAATACA+CGG - Chr3:65870448-65870467 MsG0380015145.01.T01:intron 40.0%
TTTGAAAGCAGTAGGGTCAA+GGG - Chr3:65874235-65874254 MsG0380015145.01.T01:intron 40.0%
! GATTCTATATTGACTGGCGT+AGG - Chr3:65871973-65871992 MsG0380015145.01.T01:intron 40.0%
! GCATTCAATCGATTCATGCA+TGG + Chr3:65873881-65873900 None:intergenic 40.0%
! GCTGCCTTTTTATGGTGTAA+AGG - Chr3:65871605-65871624 MsG0380015145.01.T01:intron 40.0%
! TCACTGCAGAAACTTTTCAC+GGG - Chr3:65873217-65873236 MsG0380015145.01.T01:intron 40.0%
! TCATTTGACGGCAGTTTTTG+AGG - Chr3:65871572-65871591 MsG0380015145.01.T01:intron 40.0%
! TCTCTCGTGAGGTTTTTACT+AGG - Chr3:65873071-65873090 MsG0380015145.01.T01:intron 40.0%
! TGCTGATGATGCTGATGATA+AGG - Chr3:65870162-65870181 MsG0380015145.01.T01:intron 40.0%
! TGTCTTCTGCTGCCTTTTTA+TGG - Chr3:65871597-65871616 MsG0380015145.01.T01:intron 40.0%
! TTGATGACAATCTTTGCAGG+TGG - Chr3:65872618-65872637 MsG0380015145.01.T01:intron 40.0%
! TTTTATCCAGTCTCAAGTCC+GGG + Chr3:65870934-65870953 None:intergenic 40.0%
!! AAAATCATGTTGGCTCACCA+TGG - Chr3:65873594-65873613 MsG0380015145.01.T01:intron 40.0%
!! AACTCCCTAGCTTTTCTGAT+GGG - Chr3:65871828-65871847 MsG0380015145.01.T01:intron 40.0%
!! CCAATAGTGTTGGTTTGAGT+GGG - Chr3:65872200-65872219 MsG0380015145.01.T01:CDS 40.0%
!! GTAGCAGGTTGTTAGTTTGT+AGG - Chr3:65871458-65871477 MsG0380015145.01.T01:intron 40.0%
!! GTCGTGTTTTTGTTCATTGC+TGG - Chr3:65870205-65870224 MsG0380015145.01.T01:intron 40.0%
!! TAACTCCCTAGCTTTTCTGA+TGG - Chr3:65871827-65871846 MsG0380015145.01.T01:intron 40.0%
!!! CAGTTTCAGTTTTGGTTCTG+TGG - Chr3:65871544-65871563 MsG0380015145.01.T01:intron 40.0%
!!! TACATTTTGGTTGGAGTCCT+TGG - Chr3:65871265-65871284 MsG0380015145.01.T01:intron 40.0%
!!! TAGCTGTTTTTTTCGGATGC+AGG - Chr3:65871407-65871426 MsG0380015145.01.T01:intron 40.0%
!!! TTTGCTTCTAGTGCTGGTTT+TGG - Chr3:65871372-65871391 MsG0380015145.01.T01:intron 40.0%
AACACTATTGGCGTGTTGTG+CGG + Chr3:65872191-65872210 None:intergenic 45.0%
ACACACTGAATCGTCAGCAT+CGG + Chr3:65871352-65871371 None:intergenic 45.0%
ACACGAGACAAATCCGGAAT+CGG + Chr3:65871868-65871887 None:intergenic 45.0%
ACTGCTTTCTCTATGAGTGG+AGG - Chr3:65871194-65871213 MsG0380015145.01.T01:intron 45.0%
AGAGAGAGAGAACCATATGG+TGG - Chr3:65874292-65874311 MsG0380015145.01.T01:intron 45.0%
AGGAGGCTGAAACTGAGTTA+AGG + Chr3:65870003-65870022 None:intergenic 45.0%
ATAGATTGTTGAGGTGGGGT+AGG - Chr3:65871015-65871034 MsG0380015145.01.T01:intron 45.0%
ATGCAGATGGTTTGAGTGGA+GGG - Chr3:65871161-65871180 MsG0380015145.01.T01:intron 45.0%
ATTATGGACCCCACAGAAAG+AGG - Chr3:65874759-65874778 MsG0380015145.01.T01:CDS 45.0%
CATACAGAAATGGGGTGACA+TGG + Chr3:65872909-65872928 None:intergenic 45.0%
CATGTCACCCCATTTCTGTA+TGG - Chr3:65872907-65872926 MsG0380015145.01.T01:intron 45.0%
CCCACTCAAACCAACACTAT+TGG + Chr3:65872203-65872222 None:intergenic 45.0%
CTCACTGCTTTCTCTATGAG+TGG - Chr3:65871191-65871210 MsG0380015145.01.T01:intron 45.0%
CTTTCTCTATGAGTGGAGGT+GGG - Chr3:65871198-65871217 MsG0380015145.01.T01:intron 45.0%
GAAAAAGAGAAACCTCGCAG+TGG - Chr3:65873411-65873430 MsG0380015145.01.T01:intron 45.0%
GAAATTCTTTCAGGCTGGTG+AGG - Chr3:65874735-65874754 MsG0380015145.01.T01:CDS 45.0%
GATCTTAAAAGGAGCCAGGA+GGG - Chr3:65872640-65872659 MsG0380015145.01.T01:intron 45.0%
GCACTAAAATAAGGCCCCAA+CGG + Chr3:65871520-65871539 None:intergenic 45.0%
GCATCATCAGCATCACTAGA+AGG + Chr3:65870154-65870173 None:intergenic 45.0%
GGTTGGAATGTTGGATGAGA+TGG - Chr3:65870395-65870414 MsG0380015145.01.T01:intron 45.0%
TCTTCAGCTCCCTTCATGTT+AGG + Chr3:65874580-65874599 None:intergenic 45.0%
TGAACATCAACTCTAGCTGC+AGG + Chr3:65871655-65871674 None:intergenic 45.0%
TGATGTTGCACCCATACACT+TGG + Chr3:65870118-65870137 None:intergenic 45.0%
TGGTGCATTATAGTGTCCCT+AGG - Chr3:65871708-65871727 MsG0380015145.01.T01:intron 45.0%
TGTCATGCAGATGGTTTGAG+TGG - Chr3:65871157-65871176 MsG0380015145.01.T01:intron 45.0%
TGTGCATGTTTGGTATCTGC+TGG + Chr3:65873622-65873641 None:intergenic 45.0%
TTTGGTATCTGCTGGAACCA+TGG + Chr3:65873614-65873633 None:intergenic 45.0%
! ACACAACCTCTCCTTTTACC+CGG - Chr3:65870913-65870932 MsG0380015145.01.T01:intron 45.0%
! CCCTTGATGACAATCTTTGC+AGG - Chr3:65872615-65872634 MsG0380015145.01.T01:intron 45.0%
! CTCGTGAGGTTTTTACTAGG+TGG - Chr3:65873074-65873093 MsG0380015145.01.T01:intron 45.0%
! GTGCAGGACAGTTTCAGTTT+TGG - Chr3:65871536-65871555 MsG0380015145.01.T01:intron 45.0%
! GTGTGTTTTGCTTCTAGTGC+TGG - Chr3:65871366-65871385 MsG0380015145.01.T01:intron 45.0%
! TCATAGACTTGGCTAGCTGA+GGG + Chr3:65874822-65874841 None:intergenic 45.0%
! TTCAGGCTGGTGAGGTATTA+TGG - Chr3:65874743-65874762 MsG0380015145.01.T01:CDS 45.0%
! TTCATAGACTTGGCTAGCTG+AGG + Chr3:65874823-65874842 None:intergenic 45.0%
!! GCCAATAGTGTTGGTTTGAG+TGG - Chr3:65872199-65872218 MsG0380015145.01.T01:CDS 45.0%
!!! TTGGGGCCTTATTTTAGTGC+AGG - Chr3:65871520-65871539 MsG0380015145.01.T01:intron 45.0%
AACTCAGTTTCAGCCTCCTC+AGG - Chr3:65870004-65870023 MsG0380015145.01.T01:exon 50.0%
ACATCAACTCTAGCTGCAGG+AGG + Chr3:65871652-65871671 None:intergenic 50.0%
ATACAGGTAAGGACTGGGTG+AGG - Chr3:65871237-65871256 MsG0380015145.01.T01:intron 50.0%
CAGTCTCAAGTCCGGGTAAA+AGG + Chr3:65870927-65870946 None:intergenic 50.0%
CATGCAGATGGTTTGAGTGG+AGG - Chr3:65871160-65871179 MsG0380015145.01.T01:intron 50.0%
GACCAGAAAACTCTTCGCCA+AGG + Chr3:65871285-65871304 None:intergenic 50.0%
GAGGATGACACCCTTTCAGA+TGG - Chr3:65874778-65874797 MsG0380015145.01.T01:CDS 50.0%
GATGCAGAGTTGTGTGCTTC+TGG - Chr3:65871675-65871694 MsG0380015145.01.T01:intron 50.0%
GCACAACACGCCAATAGTGT+TGG - Chr3:65872190-65872209 MsG0380015145.01.T01:CDS 50.0%
GCTTTCTCTATGAGTGGAGG+TGG - Chr3:65871197-65871216 MsG0380015145.01.T01:intron 50.0%
GGAAGGGGATCTGGCTAATT+TGG - Chr3:65871055-65871074 MsG0380015145.01.T01:intron 50.0%
GGATCTTAAAAGGAGCCAGG+AGG - Chr3:65872639-65872658 MsG0380015145.01.T01:intron 50.0%
GGTGGATCTTAAAAGGAGCC+AGG - Chr3:65872636-65872655 MsG0380015145.01.T01:intron 50.0%
TCAAGTCCGGGTAAAAGGAG+AGG + Chr3:65870922-65870941 None:intergenic 50.0%
TGTTCACACTGTAGTGCCGT+TGG - Chr3:65871501-65871520 MsG0380015145.01.T01:intron 50.0%
! AGCATTTTTCTCCACCCTCC+TGG + Chr3:65872657-65872676 None:intergenic 50.0%
! AGGGTGTCATCCTCTTTCTG+TGG + Chr3:65874772-65874791 None:intergenic 50.0%
! CTTTTACCCGGACTTGAGAC+TGG - Chr3:65870925-65870944 MsG0380015145.01.T01:intron 50.0%
! GGGTGTCATCCTCTTTCTGT+GGG + Chr3:65874771-65874790 None:intergenic 50.0%
! GGTGTCATCCTCTTTCTGTG+GGG + Chr3:65874770-65874789 None:intergenic 50.0%
! GTCCTTGGCGAAGAGTTTTC+TGG - Chr3:65871280-65871299 MsG0380015145.01.T01:intron 50.0%
! GTTCACACTGTAGTGCCGTT+GGG - Chr3:65871502-65871521 MsG0380015145.01.T01:intron 50.0%
! TTCACACTGTAGTGCCGTTG+GGG - Chr3:65871503-65871522 MsG0380015145.01.T01:intron 50.0%
!! GAGGAGGGGTACATTTTGGT+TGG - Chr3:65871256-65871275 MsG0380015145.01.T01:intron 50.0%
!! GGCGTGTGCTGTTTATTGAG+AGG - Chr3:65870480-65870499 MsG0380015145.01.T01:intron 50.0%
!! GTTGGTTTGAGTGGGTGCAT+TGG - Chr3:65872208-65872227 MsG0380015145.01.T01:CDS 50.0%
AGGTAAGGACTGGGTGAGGA+GGG - Chr3:65871241-65871260 MsG0380015145.01.T01:intron 55.0%
CAGTAGGGTCAAGGGTTCCT+TGG - Chr3:65874243-65874262 MsG0380015145.01.T01:intron 55.0%
CTTAAAAGGAGCCAGGAGGG+TGG - Chr3:65872643-65872662 MsG0380015145.01.T01:intron 55.0%
GGAACAGATCCTCTCTCGTG+AGG - Chr3:65873060-65873079 MsG0380015145.01.T01:intron 55.0%
GGGGTGACATGGCAAAGTAG+TGG + Chr3:65872898-65872917 None:intergenic 55.0%
GTGCTTCTGGTCTGCAGCTT+TGG - Chr3:65871688-65871707 MsG0380015145.01.T01:intron 55.0%
TCAGTTTCAGCCTCCTCAGG+AGG - Chr3:65870007-65870026 MsG0380015145.01.T01:CDS 55.0%
TGTTGAGGTGGGGTAGGTAG+AGG - Chr3:65871021-65871040 MsG0380015145.01.T01:intron 55.0%
TTGTTGTCGAACCCACTGCG+AGG + Chr3:65873426-65873445 None:intergenic 55.0%
!! ACTGAATCGTCAGCATCGGC+AGG + Chr3:65871348-65871367 None:intergenic 55.0%
!! GGGTGAGGAGGGGTACATTT+TGG - Chr3:65871252-65871271 MsG0380015145.01.T01:intron 55.0%
CAGGTAAGGACTGGGTGAGG+AGG - Chr3:65871240-65871259 MsG0380015145.01.T01:intron 60.0%
CGCTGCTGTCAGTCTGTGTG+AGG - Chr3:65871304-65871323 MsG0380015145.01.T01:intron 60.0%
GGTAAGGACTGGGTGAGGAG+GGG - Chr3:65871242-65871261 MsG0380015145.01.T01:intron 60.0%
!! AGCCTCCTCAGGAGGTGTTG+CGG - Chr3:65870015-65870034 MsG0380015145.01.T01:CDS 60.0%
!! CAGCATCGGCAGGACAGCAT+CGG + Chr3:65871338-65871357 None:intergenic 60.0%
TCCCGCAACACCTCCTGAGG+AGG + Chr3:65870020-65870039 None:intergenic 65.0%
!! CCTCAGGAGGTGTTGCGGGA+GGG - Chr3:65870020-65870039 MsG0380015145.01.T01:CDS 65.0%
!! GCAGGACAGCATCGGCACAC+AGG + Chr3:65871330-65871349 None:intergenic 65.0%
!! GCCTCCTCAGGAGGTGTTGC+GGG - Chr3:65870016-65870035 MsG0380015145.01.T01:CDS 65.0%
!! TCCTCAGGAGGTGTTGCGGG+AGG - Chr3:65870019-65870038 MsG0380015145.01.T01:CDS 65.0%
CCCTCCCGCAACACCTCCTG+AGG + Chr3:65870023-65870042 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 65869926 65874991 65869926 ID=MsG0380015145.01;Name=MsG0380015145.01
Chr3 mRNA 65869926 65874991 65869926 ID=MsG0380015145.01.T01;Parent=MsG0380015145.01;Name=MsG0380015145.01.T01;_AED=0.50;_eAED=0.54;_QI=0|0.5|0.57|1|0.83|0.85|7|79|369
Chr3 exon 65869926 65870169 65869926 ID=MsG0380015145.01.T01:exon:22879;Parent=MsG0380015145.01.T01
Chr3 exon 65870263 65870379 65870263 ID=MsG0380015145.01.T01:exon:22878;Parent=MsG0380015145.01.T01
Chr3 exon 65872116 65872280 65872116 ID=MsG0380015145.01.T01:exon:22877;Parent=MsG0380015145.01.T01
Chr3 exon 65872378 65872480 65872378 ID=MsG0380015145.01.T01:exon:22876;Parent=MsG0380015145.01.T01
Chr3 exon 65873675 65873750 65873675 ID=MsG0380015145.01.T01:exon:22875;Parent=MsG0380015145.01.T01
Chr3 exon 65874416 65874521 65874416 ID=MsG0380015145.01.T01:exon:22874;Parent=MsG0380015145.01.T01
Chr3 exon 65874614 65874991 65874614 ID=MsG0380015145.01.T01:exon:22873;Parent=MsG0380015145.01.T01
Chr3 CDS 65874614 65874991 65874614 ID=MsG0380015145.01.T01:cds;Parent=MsG0380015145.01.T01
Chr3 CDS 65874416 65874521 65874416 ID=MsG0380015145.01.T01:cds;Parent=MsG0380015145.01.T01
Chr3 CDS 65873675 65873750 65873675 ID=MsG0380015145.01.T01:cds;Parent=MsG0380015145.01.T01
Chr3 CDS 65872378 65872480 65872378 ID=MsG0380015145.01.T01:cds;Parent=MsG0380015145.01.T01
Chr3 CDS 65872116 65872280 65872116 ID=MsG0380015145.01.T01:cds;Parent=MsG0380015145.01.T01
Chr3 CDS 65870263 65870379 65870263 ID=MsG0380015145.01.T01:cds;Parent=MsG0380015145.01.T01
Chr3 CDS 65870005 65870169 65870005 ID=MsG0380015145.01.T01:cds;Parent=MsG0380015145.01.T01
Chr3 three_prime_UTR 65869926 65870004 65869926 ID=MsG0380015145.01.T01:three_prime_utr;Parent=MsG0380015145.01.T01
Gene Sequence

>MsG0380015145.01.T01

ATGGGTTTTTCAAGAAAACACGTTACGAGTATCATTGCTTTATCACTGCTTGTGTTGTTATCATTAACATGGAACCTTAACTCAGTTTCAGCCTCCTCAGGAGGTGTTGCGGGAGGGAGTTTCTTCAAATCAGATTCTTCCTCATCCTCTAAATCATCCTCTGAATCATTCACAACTTATTCAAATTCTCCAAGTGTATGGGTGCAACATCATACCTATGTTACCCCTTCTAGTGATGCTGATGATGCTGATGATAAGGTTACAAATGATGAAGGAGGGGTCGTGTTTTTGTTCATTGCTGGCATAATCGGTATCATTTATTTTGTACGTCGTTTTACAGAAAACAATGATGATCCAGTTACTGTTCTCAAGCTTCAGGTTGGAATGTTGGATGAGATGGGATGTACATTACAAAGGGATCTAGCTAGGATTGCAGAAGCTGCTAATACACGGTATAAGGAAGGCGTGTGCTGTTTATTGAGAGATGGTTTGAGTGGAGGGAAGATTTCTCACTGCTTTCTCTATGAGTGGAGGTGGGATCCTATTAACTGTTTATACAGGCTTTGTATAATTGATATACTTCTTGTTGTCTGGCCTTCTGTAACAGAGACAATACAAACTTTGGATAAACATCATGGTTACTGTATAGCAGGATATTCATCTGTGGATCTTAAAAGGAGCCAGGAGGGTGGAGAAAAATGCTATAACCAACTATCAATTGAAGAAAGGGAAAAATTTGATGGAGAGACATTAGTTAACTTGAGCAACAACAATAAGACATGTACAAGAAGCCAGAGTTATGATAAGTTTAGCAATGAATATTCCACGGTAACAATATTGGTAGCTACTAGAGGAGCACATAAGCTACCTAACATGAAGGGAGCTGAAGATTTAAAGGAAGCTTTGCAAAAGCTTAAATCCCTTCTCTACTGGAGAGATCTATTAGCTGGTGAGGTATTATGGACCCCACAGAAAGAGGATGACACCCTTTCAGATGGAAAACTACTTAAAGATTACCCTCAGCTAGCCAAGTCTATGAAATATGAAATGAATAAACAAGTGGGTAATGCTTGGTTATCATTTTTGCATCCTTTTTTTCCTAGCAATTGA

Protein sequence

>MsG0380015145.01.T01

MGFSRKHVTSIIALSLLVLLSLTWNLNSVSASSGGVAGGSFFKSDSSSSSKSSSESFTTYSNSPSVWVQHHTYVTPSSDADDADDKVTNDEGGVVFLFIAGIIGIIYFVRRFTENNDDPVTVLKLQVGMLDEMGCTLQRDLARIAEAANTRYKEGVCCLLRDGLSGGKISHCFLYEWRWDPINCLYRLCIIDILLVVWPSVTETIQTLDKHHGYCIAGYSSVDLKRSQEGGEKCYNQLSIEEREKFDGETLVNLSNNNKTCTRSQSYDKFSNEYSTVTILVATRGAHKLPNMKGAEDLKEALQKLKSLLYWRDLLAGEVLWTPQKEDDTLSDGKLLKDYPQLAKSMKYEMNKQVGNAWLSFLHPFFPSN*