AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044409.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044409.01.T01 MTR_8g463130 96.337 273 10 0 3 275 10 282 0.0 540
MsG0880044409.01.T01 MTR_8g463130 96.850 254 8 0 22 275 1 254 0.0 506
MsG0880044409.01.T01 MTR_2g078760 79.562 274 55 1 3 275 60 333 2.47e-159 446
MsG0880044409.01.T01 MTR_2g078760 79.921 254 51 0 22 275 1 254 6.33e-151 422
MsG0880044409.01.T01 MTR_2g078760 80.000 230 45 1 3 231 60 289 1.46e-132 377
MsG0880044409.01.T01 MTR_4g094208 65.038 266 92 1 9 274 12 276 1.63e-120 346
MsG0880044409.01.T01 MTR_2g008850 61.940 268 101 1 7 274 14 280 3.82e-113 327
MsG0880044409.01.T01 MTR_5g063940 61.887 265 100 1 11 275 19 282 6.35e-112 324
MsG0880044409.01.T01 MTR_3g074610 59.480 269 108 1 8 275 14 282 1.41e-111 323
MsG0880044409.01.T01 MTR_2g008850 64.530 234 83 0 41 274 1 234 3.56e-106 308
MsG0880044409.01.T01 MTR_5g063940 64.255 235 84 0 41 275 1 235 1.90e-104 303
MsG0880044409.01.T01 MTR_4g094542 58.333 252 104 1 23 274 114 364 4.81e-102 302
MsG0880044409.01.T01 MTR_2g078760 79.444 180 36 1 3 181 60 239 2.50e-100 294
MsG0880044409.01.T01 MTR_4g094208 63.743 171 61 1 9 179 12 181 6.09e-71 218
MsG0880044409.01.T01 MTR_1g115570 43.233 266 138 7 15 274 79 337 1.51e-65 208
MsG0880044409.01.T01 MTR_1g014640 43.369 279 142 7 7 274 50 323 1.77e-64 205
MsG0880044409.01.T01 MTR_1g013400 43.369 279 142 7 7 274 50 323 1.77e-64 205
MsG0880044409.01.T01 MTR_3g105730 44.528 265 139 6 13 274 21 280 1.30e-63 202
MsG0880044409.01.T01 MTR_3g105730 44.622 251 132 5 27 274 12 258 7.20e-63 199
MsG0880044409.01.T01 MTR_3g091060 40.784 255 144 5 24 275 91 341 1.40e-54 181
MsG0880044409.01.T01 MTR_1g075730 34.766 256 137 6 26 274 41 273 1.38e-40 142
MsG0880044409.01.T01 MTR_5g071550 37.354 257 145 7 28 274 124 374 1.12e-39 142
MsG0880044409.01.T01 MTR_1g075730 34.766 256 141 6 26 274 41 277 1.30e-39 139
MsG0880044409.01.T01 MTR_1g041475 37.891 256 129 6 26 274 41 273 5.67e-39 137
MsG0880044409.01.T01 MTR_3g464650 37.452 259 144 8 29 275 63 315 1.22e-38 138
MsG0880044409.01.T01 MTR_3g464700 41.014 217 116 7 29 239 87 297 2.10e-36 132
MsG0880044409.01.T01 MTR_4g116420 34.016 244 138 6 49 275 114 351 1.34e-34 129
MsG0880044409.01.T01 MTR_5g071550 39.320 206 115 6 28 229 124 323 2.18e-32 122
MsG0880044409.01.T01 MTR_5g024340 33.624 229 134 6 58 274 123 345 2.24e-31 120
MsG0880044409.01.T01 MTR_4g123080 31.224 237 135 6 58 272 94 324 2.48e-30 117
MsG0880044409.01.T01 MTR_1g050520 35.223 247 143 7 40 272 399 642 3.36e-30 119
MsG0880044409.01.T01 MTR_4g123080 31.224 237 135 6 58 272 112 342 3.51e-30 117
MsG0880044409.01.T01 MTR_3g107880 33.610 241 138 7 50 275 55 288 3.58e-30 115
MsG0880044409.01.T01 MTR_4g125810 35.039 254 120 8 59 272 253 501 9.11e-30 117
MsG0880044409.01.T01 MTR_3g107880 33.610 241 138 7 50 275 112 345 1.02e-29 115
MsG0880044409.01.T01 MTR_3g068200 34.559 272 135 7 41 272 105 373 1.08e-29 115
MsG0880044409.01.T01 MTR_3g107880 33.610 241 138 7 50 275 113 346 1.13e-29 115
MsG0880044409.01.T01 MTR_3g104710 34.375 256 122 7 59 272 286 537 3.61e-29 116
MsG0880044409.01.T01 MTR_2g033000 31.780 236 133 8 59 272 100 329 7.84e-29 113
MsG0880044409.01.T01 MTR_5g009370 34.440 241 120 9 27 242 52 279 8.30e-29 112
MsG0880044409.01.T01 MTR_8g102550 33.613 238 131 6 59 272 152 386 1.18e-28 113
MsG0880044409.01.T01 MTR_6g081850 32.222 270 145 11 38 274 54 318 7.66e-28 109
MsG0880044409.01.T01 MTR_5g080680 35.319 235 125 8 28 242 102 329 1.79e-27 109
MsG0880044409.01.T01 MTR_1g086350 30.508 236 136 9 59 272 16 245 2.63e-27 107
MsG0880044409.01.T01 MTR_3g105730 39.394 165 94 5 13 174 21 182 3.64e-27 105
MsG0880044409.01.T01 MTR_1g086350 30.380 237 137 9 58 272 101 331 1.78e-26 106
MsG0880044409.01.T01 MTR_1g086350 30.380 237 137 9 58 272 117 347 2.10e-26 106
MsG0880044409.01.T01 MTR_2g040500 31.343 335 154 13 10 272 203 533 2.26e-26 108
MsG0880044409.01.T01 MTR_1g015110 33.725 255 125 8 59 272 290 541 7.25e-25 103
MsG0880044409.01.T01 MTR_1g028300 35.938 256 137 8 41 272 125 377 1.09e-24 102
MsG0880044409.01.T01 MTR_1g083690 32.624 282 132 13 45 275 77 351 7.74e-24 99.4
MsG0880044409.01.T01 MTR_3g491830 29.278 263 127 9 61 271 91 346 8.32e-24 99.8
MsG0880044409.01.T01 MTR_1g014190 26.959 319 154 12 25 274 21 329 1.05e-22 96.3
MsG0880044409.01.T01 MTR_1g014190 27.723 303 141 11 41 274 74 367 1.84e-22 95.9
MsG0880044409.01.T01 MTR_7g090550 28.159 277 145 9 12 243 26 293 8.42e-22 94.4
MsG0880044409.01.T01 MTR_7g112430 31.780 236 131 10 59 272 68 295 2.78e-21 92.8
MsG0880044409.01.T01 MTR_2g435550 32.588 313 151 19 15 275 36 340 4.13e-21 91.7
MsG0880044409.01.T01 MTR_2g435550 32.588 313 151 19 15 275 50 354 4.73e-21 91.7
MsG0880044409.01.T01 MTR_7g029240 34.454 238 130 12 57 272 66 299 6.23e-21 92.0
MsG0880044409.01.T01 MTR_1g112840 27.612 268 141 8 24 243 42 304 8.57e-21 91.3
MsG0880044409.01.T01 MTR_7g112490 30.741 270 130 12 62 275 112 380 1.71e-20 90.5
MsG0880044409.01.T01 MTR_7g112490 30.314 287 141 13 45 275 79 362 1.85e-20 90.1
MsG0880044409.01.T01 MTR_7g100240 25.545 321 168 10 22 275 30 346 2.30e-20 89.7
MsG0880044409.01.T01 MTR_4g007440 26.389 288 139 8 54 274 47 328 6.00e-20 88.6
MsG0880044409.01.T01 MTR_3g105880 25.606 289 141 8 54 274 47 329 1.59e-19 87.4
MsG0880044409.01.T01 MTR_4g120410 37.705 183 88 11 117 275 173 353 1.92e-19 87.0
MsG0880044409.01.T01 MTR_4g113480 28.169 284 139 12 32 268 51 316 2.39e-19 87.8
MsG0880044409.01.T01 MTR_1g019760 28.522 291 169 12 2 272 21 292 5.04e-19 86.7
MsG0880044409.01.T01 MTR_1g019760 28.866 291 168 12 2 272 21 292 5.63e-19 86.3
MsG0880044409.01.T01 MTR_1g083750 27.897 233 144 7 59 272 68 295 6.38e-19 86.3
MsG0880044409.01.T01 MTR_2g435550 32.963 270 129 16 34 258 68 330 1.15e-18 85.1
MsG0880044409.01.T01 MTR_1g110210 27.907 258 151 11 42 272 46 295 1.32e-18 84.3
MsG0880044409.01.T01 MTR_8g017240 33.463 257 123 13 62 275 89 340 1.42e-18 84.7
MsG0880044409.01.T01 MTR_1g067210 26.415 318 163 13 22 272 35 348 1.73e-18 84.7
MsG0880044409.01.T01 MTR_3g105880 38.806 134 65 4 119 241 160 287 2.24e-18 83.6
MsG0880044409.01.T01 MTR_3g101540 29.487 234 139 10 59 272 66 293 2.57e-18 84.3
MsG0880044409.01.T01 MTR_3g101540 29.487 234 139 10 59 272 66 293 2.82e-18 84.3
MsG0880044409.01.T01 MTR_1g116260 27.336 289 150 11 22 259 39 318 6.28e-18 83.2
MsG0880044409.01.T01 MTR_7g081020 26.667 285 153 11 24 259 37 314 8.75e-18 82.8
MsG0880044409.01.T01 MTR_8g074930 27.143 280 145 10 24 252 40 311 1.73e-17 81.6
MsG0880044409.01.T01 MTR_4g118340 27.059 255 145 9 59 273 86 339 2.06e-17 81.6
MsG0880044409.01.T01 MTR_7g090530 27.245 323 155 12 22 274 35 347 4.20e-17 80.9
MsG0880044409.01.T01 MTR_7g081020 26.119 268 145 9 24 243 37 299 4.36e-17 80.1
MsG0880044409.01.T01 MTR_7g021530 37.576 165 69 7 119 259 141 295 6.14e-17 80.1
MsG0880044409.01.T01 MTR_5g071550 36.842 152 87 5 28 177 124 268 7.44e-17 79.0
MsG0880044409.01.T01 MTR_7g021530 37.576 165 69 7 119 259 191 345 9.51e-17 79.7
MsG0880044409.01.T01 MTR_7g021530 37.576 165 69 7 119 259 232 386 1.29e-16 79.7
MsG0880044409.01.T01 MTR_3g032700 28.621 290 147 13 18 259 29 306 2.63e-16 78.6
MsG0880044409.01.T01 MTR_4g013295 38.608 158 80 7 118 259 165 321 2.78e-16 78.2
MsG0880044409.01.T01 MTR_7g080170 33.854 192 109 7 85 259 172 362 3.04e-16 78.6
MsG0880044409.01.T01 MTR_7g070510 36.538 156 83 6 119 259 188 342 3.35e-16 78.2
MsG0880044409.01.T01 MTR_7g080170 33.854 192 109 7 85 259 64 254 3.72e-16 78.2
MsG0880044409.01.T01 MTR_3g032660 28.621 290 147 13 18 259 29 306 3.84e-16 78.2
MsG0880044409.01.T01 MTR_1g106855 26.761 284 154 10 22 260 28 302 1.06e-15 76.6
MsG0880044409.01.T01 MTR_1g106855 25.540 278 154 8 22 254 28 297 1.54e-15 75.5
MsG0880044409.01.T01 MTR_1g083750 30.270 185 112 5 100 272 24 203 2.08e-15 75.5
MsG0880044409.01.T01 MTR_4g037470 34.463 177 98 7 99 258 181 356 3.14e-15 75.5
MsG0880044409.01.T01 MTR_4g037470 34.463 177 98 7 99 258 172 347 3.72e-15 75.5
MsG0880044409.01.T01 MTR_2g090190 35.294 187 100 8 89 258 158 340 2.06e-14 73.2
MsG0880044409.01.T01 MTR_5g080680 32.804 189 100 8 28 196 102 283 1.26e-13 69.7
MsG0880044409.01.T01 MTR_4g113345 29.200 250 144 11 30 259 35 271 2.64e-13 69.3
MsG0880044409.01.T01 MTR_0015s0140 26.573 286 156 12 22 261 46 323 2.80e-13 69.7
MsG0880044409.01.T01 MTR_2g033910 26.596 282 156 12 22 260 42 315 2.96e-13 69.3
MsG0880044409.01.T01 MTR_4g123080 31.852 135 65 4 165 272 95 229 6.70e-13 67.4
MsG0880044409.01.T01 MTR_1g016620 34.247 146 64 6 119 241 152 288 1.98e-12 66.6
MsG0880044409.01.T01 MTR_7g060770 25.436 287 152 10 26 260 235 511 4.91e-12 66.2
MsG0880044409.01.T01 MTR_8g074930 28.358 201 96 6 95 252 4 199 1.02e-11 64.3
MsG0880044409.01.T01 MTR_7g021530 37.410 139 54 6 119 233 191 320 4.74e-11 62.8
MsG0880044409.01.T01 MTR_7g021530 37.410 139 54 6 119 233 232 361 6.91e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044409.01.T01 AT3G15260 75.362 276 65 2 3 275 14 289 2.16e-153 429
MsG0880044409.01.T01 AT3G15260 75.362 276 65 2 3 275 14 289 2.16e-153 429
MsG0880044409.01.T01 AT4G28400 68.679 265 83 0 11 275 19 283 5.88e-137 388
MsG0880044409.01.T01 AT4G28400 68.846 260 81 0 16 275 2 261 3.27e-135 382
MsG0880044409.01.T01 AT2G20630 63.060 268 99 0 8 275 12 279 1.90e-126 361
MsG0880044409.01.T01 AT2G20630 62.547 267 100 0 8 274 12 278 1.36e-123 354
MsG0880044409.01.T01 AT1G22280 60.800 250 98 0 26 275 32 281 3.76e-112 325
MsG0880044409.01.T01 AT1G34750 59.480 269 108 1 7 275 15 282 4.08e-111 322
MsG0880044409.01.T01 AT1G34750 59.480 269 108 1 7 275 15 282 4.08e-111 322
MsG0880044409.01.T01 AT1G34750 59.480 269 108 1 7 275 15 282 4.08e-111 322
MsG0880044409.01.T01 AT4G28400 67.873 221 71 0 11 231 19 239 5.44e-111 321
MsG0880044409.01.T01 AT1G22280 59.375 256 98 1 26 275 32 287 1.21e-109 318
MsG0880044409.01.T01 AT1G78200 54.579 273 120 3 6 275 12 283 3.53e-98 289
MsG0880044409.01.T01 AT1G78200 54.579 273 120 3 6 275 12 283 3.53e-98 289
MsG0880044409.01.T01 AT1G78200 54.579 273 120 3 6 275 12 283 3.53e-98 289
MsG0880044409.01.T01 AT2G34740 58.233 249 100 3 28 274 88 334 3.37e-96 286
MsG0880044409.01.T01 AT1G34750 59.111 225 91 1 7 231 15 238 1.37e-90 269
MsG0880044409.01.T01 AT1G78200 57.143 238 99 2 41 275 1 238 1.77e-89 266
MsG0880044409.01.T01 AT1G78200 57.143 238 99 2 41 275 1 238 1.77e-89 266
MsG0880044409.01.T01 AT2G34740 57.143 210 86 3 28 235 102 309 7.73e-80 244
MsG0880044409.01.T01 AT2G34740 57.143 210 86 3 28 235 84 291 8.43e-80 243
MsG0880044409.01.T01 AT1G22280 60.390 154 61 0 26 179 32 185 1.47e-64 201
MsG0880044409.01.T01 AT5G10740 43.774 265 141 6 13 274 20 279 3.31e-64 205
MsG0880044409.01.T01 AT5G10740 43.774 265 141 6 13 274 20 279 3.31e-64 205
MsG0880044409.01.T01 AT4G31750 43.019 265 143 6 13 274 20 279 5.80e-63 200
MsG0880044409.01.T01 AT4G31750 43.019 265 143 6 13 274 20 279 9.64e-63 200
MsG0880044409.01.T01 AT4G31750 43.019 265 143 6 13 274 20 279 9.64e-63 200
MsG0880044409.01.T01 AT5G24940 43.019 265 143 6 13 274 20 279 2.50e-62 203
MsG0880044409.01.T01 AT1G43900 40.502 279 151 8 7 275 96 369 1.13e-61 199
MsG0880044409.01.T01 AT5G53140 37.945 253 150 5 26 275 100 348 5.25e-51 172
MsG0880044409.01.T01 AT5G53140 37.945 253 150 5 26 275 100 348 5.25e-51 172
MsG0880044409.01.T01 AT1G07160 38.267 277 154 7 11 274 104 376 5.50e-43 150
MsG0880044409.01.T01 AT2G30020 40.650 246 131 6 38 272 149 390 6.07e-41 145
MsG0880044409.01.T01 AT2G40180 35.714 252 139 8 41 275 141 386 2.69e-34 128
MsG0880044409.01.T01 AT3G51470 31.765 255 145 7 39 274 39 283 6.63e-33 122
MsG0880044409.01.T01 AT3G51470 32.157 255 144 8 39 274 83 327 1.80e-32 122
MsG0880044409.01.T01 AT1G67820 37.089 213 124 6 52 259 108 315 3.83e-32 122
MsG0880044409.01.T01 AT1G67820 37.559 213 123 6 52 259 144 351 1.01e-31 122
MsG0880044409.01.T01 AT2G25620 34.615 234 128 7 58 272 127 354 2.74e-31 120
MsG0880044409.01.T01 AT2G25620 34.615 234 128 7 58 272 127 354 2.74e-31 120
MsG0880044409.01.T01 AT3G62260 33.891 239 131 8 58 274 26 259 6.17e-31 117
MsG0880044409.01.T01 AT2G33700 33.188 229 135 6 58 274 122 344 9.25e-31 118
MsG0880044409.01.T01 AT3G23360 31.225 253 140 6 26 274 37 259 1.50e-30 115
MsG0880044409.01.T01 AT3G62260 33.333 243 127 8 58 274 116 349 3.07e-30 117
MsG0880044409.01.T01 AT3G62260 33.333 243 127 8 58 274 115 348 3.25e-30 117
MsG0880044409.01.T01 AT3G11410 37.321 209 96 6 59 238 137 339 2.19e-29 115
MsG0880044409.01.T01 AT5G51760 37.175 269 111 9 59 272 114 379 4.65e-29 114
MsG0880044409.01.T01 AT1G07430 36.816 201 106 5 60 242 158 355 5.16e-29 114
MsG0880044409.01.T01 AT5G59220 38.776 196 102 5 62 242 151 343 5.39e-29 114
MsG0880044409.01.T01 AT5G51760 37.175 269 111 9 59 272 144 409 8.05e-29 114
MsG0880044409.01.T01 AT2G29380 33.103 290 140 12 28 272 78 358 9.22e-29 112
MsG0880044409.01.T01 AT1G48040 31.535 241 135 6 58 274 115 349 4.69e-28 111
MsG0880044409.01.T01 AT3G16800 36.680 259 114 14 62 275 1 254 4.96e-28 108
MsG0880044409.01.T01 AT3G16800 36.680 259 114 14 62 275 1 254 4.96e-28 108
MsG0880044409.01.T01 AT1G72770 34.457 267 117 8 59 272 238 499 8.09e-28 112
MsG0880044409.01.T01 AT1G72770 34.457 267 117 8 59 272 238 499 8.09e-28 112
MsG0880044409.01.T01 AT1G72770 34.457 267 117 8 59 272 238 499 8.09e-28 112
MsG0880044409.01.T01 AT3G17250 31.148 244 136 8 57 274 156 393 1.27e-27 110
MsG0880044409.01.T01 AT3G16800 35.849 265 120 14 56 275 90 349 2.31e-27 108
MsG0880044409.01.T01 AT3G16800 35.849 265 120 14 56 275 90 349 2.31e-27 108
MsG0880044409.01.T01 AT3G16800 35.849 265 120 14 56 275 90 349 2.31e-27 108
MsG0880044409.01.T01 AT4G26080 36.078 255 116 11 59 272 172 420 3.82e-27 109
MsG0880044409.01.T01 AT5G57050 36.364 253 119 10 59 272 120 369 4.43e-27 108
MsG0880044409.01.T01 AT5G57050 36.364 253 119 10 59 272 160 409 7.39e-27 108
MsG0880044409.01.T01 AT2G40860 30.488 246 155 6 40 272 404 646 2.77e-25 105
MsG0880044409.01.T01 AT2G40860 30.488 246 155 6 40 272 306 548 2.79e-25 105
MsG0880044409.01.T01 AT1G17550 32.959 267 122 9 59 272 237 499 2.08e-24 102
MsG0880044409.01.T01 AT1G17550 32.959 267 122 9 59 272 237 499 2.08e-24 102
MsG0880044409.01.T01 AT1G09160 32.189 233 134 8 59 272 68 295 1.06e-23 99.8
MsG0880044409.01.T01 AT1G09160 32.189 233 134 8 59 272 68 295 1.06e-23 99.8
MsG0880044409.01.T01 AT1G18030 28.782 271 155 10 37 274 83 348 1.10e-22 96.3
MsG0880044409.01.T01 AT2G40860 29.787 235 149 6 40 261 404 635 2.67e-22 96.7
MsG0880044409.01.T01 AT4G08260 31.092 238 126 7 41 272 1 206 6.86e-22 91.3
MsG0880044409.01.T01 AT5G27930 34.749 259 120 15 62 272 95 352 1.19e-21 93.6
MsG0880044409.01.T01 AT5G27930 34.749 259 120 15 62 272 95 352 1.19e-21 93.6
MsG0880044409.01.T01 AT4G27800 29.900 301 143 12 26 271 58 345 1.51e-21 93.6
MsG0880044409.01.T01 AT3G05640 33.852 257 125 13 62 275 96 350 2.24e-21 92.4
MsG0880044409.01.T01 AT3G05640 33.852 257 125 13 62 275 96 350 2.24e-21 92.4
MsG0880044409.01.T01 AT3G05640 33.852 257 125 13 62 275 96 350 2.24e-21 92.4
MsG0880044409.01.T01 AT3G51370 28.028 289 154 10 24 262 40 324 4.55e-21 92.0
MsG0880044409.01.T01 AT3G51370 28.028 289 154 10 24 262 40 324 4.55e-21 92.0
MsG0880044409.01.T01 AT4G38520 26.814 317 163 10 24 274 42 355 3.54e-20 89.7
MsG0880044409.01.T01 AT4G38520 26.814 317 163 10 24 274 42 355 3.54e-20 89.7
MsG0880044409.01.T01 AT1G47380 28.517 263 153 11 30 272 44 291 4.73e-20 89.4
MsG0880044409.01.T01 AT4G31860 32.955 176 92 5 119 274 160 329 2.53e-19 86.7
MsG0880044409.01.T01 AT5G02760 29.329 283 147 11 8 243 17 293 3.88e-19 86.3
MsG0880044409.01.T01 AT1G68410 27.059 255 157 9 42 272 51 300 8.35e-19 85.9
MsG0880044409.01.T01 AT1G68410 27.059 255 157 9 42 272 51 300 8.35e-19 85.9
MsG0880044409.01.T01 AT1G68410 27.059 255 157 9 42 272 51 300 8.35e-19 85.9
MsG0880044409.01.T01 AT1G68410 27.059 255 157 9 42 272 51 300 8.35e-19 85.9
MsG0880044409.01.T01 AT1G18030 30.493 223 122 8 37 231 83 300 9.39e-19 84.7
MsG0880044409.01.T01 AT2G25070 24.913 289 143 8 54 274 47 329 1.12e-18 85.1
MsG0880044409.01.T01 AT2G25070 24.913 289 143 8 54 274 47 329 1.12e-18 85.1
MsG0880044409.01.T01 AT3G12620 30.000 320 143 15 25 272 45 355 3.09e-18 84.0
MsG0880044409.01.T01 AT3G12620 30.000 320 143 15 25 272 45 355 3.09e-18 84.0
MsG0880044409.01.T01 AT3G55050 27.358 318 160 10 25 275 46 359 3.13e-18 84.0
MsG0880044409.01.T01 AT3G55050 27.358 318 160 10 25 275 46 359 3.13e-18 84.0
MsG0880044409.01.T01 AT2G20050 27.559 254 143 9 59 272 143 395 7.06e-18 84.0
MsG0880044409.01.T01 AT2G20050 27.559 254 143 9 59 272 143 395 7.20e-18 84.0
MsG0880044409.01.T01 AT4G31860 38.060 134 66 4 119 241 160 287 3.42e-17 80.1
MsG0880044409.01.T01 AT1G79630 36.709 158 83 6 118 259 111 267 9.39e-17 79.7
MsG0880044409.01.T01 AT1G79630 36.709 158 83 6 118 259 111 267 9.39e-17 79.7
MsG0880044409.01.T01 AT1G79630 36.709 158 83 6 118 259 111 267 9.39e-17 79.7
MsG0880044409.01.T01 AT1G79630 36.709 158 83 6 118 259 111 267 9.39e-17 79.7
MsG0880044409.01.T01 AT5G66080 27.083 288 157 10 25 262 43 327 1.01e-16 79.7
MsG0880044409.01.T01 AT5G01700 35.450 189 105 8 86 258 78 265 1.22e-16 79.0
MsG0880044409.01.T01 AT1G79630 36.709 158 83 6 118 259 151 307 1.24e-16 79.7
MsG0880044409.01.T01 AT1G79630 36.709 158 83 6 118 259 151 307 1.24e-16 79.7
MsG0880044409.01.T01 AT5G06750 27.037 270 137 11 21 241 48 306 1.29e-16 79.3
MsG0880044409.01.T01 AT5G06750 27.037 270 137 11 21 241 48 306 1.29e-16 79.3
MsG0880044409.01.T01 AT3G02750 34.184 196 111 8 81 259 177 371 1.73e-16 79.3
MsG0880044409.01.T01 AT3G02750 34.184 196 111 8 81 259 177 371 1.73e-16 79.3
MsG0880044409.01.T01 AT1G79630 36.943 157 82 6 119 259 222 377 1.85e-16 79.3
MsG0880044409.01.T01 AT1G79630 36.943 157 82 6 119 259 218 373 1.96e-16 79.3
MsG0880044409.01.T01 AT5G01700 35.450 189 105 8 86 258 127 314 3.04e-16 78.2
MsG0880044409.01.T01 AT4G33920 27.213 305 160 12 5 259 10 302 6.91e-16 77.0
MsG0880044409.01.T01 AT4G03415 41.007 139 65 6 119 241 195 332 8.58e-16 77.4
MsG0880044409.01.T01 AT4G03415 41.007 139 65 6 119 241 195 332 8.58e-16 77.4
MsG0880044409.01.T01 AT4G03415 41.007 139 65 6 119 241 195 332 8.58e-16 77.4
MsG0880044409.01.T01 AT4G32950 31.765 255 133 12 56 275 69 317 1.16e-15 76.3
MsG0880044409.01.T01 AT3G27140 29.778 225 100 6 54 272 14 186 1.57e-15 74.7
MsG0880044409.01.T01 AT1G16220 34.857 175 92 7 119 272 199 372 4.91e-15 75.1
MsG0880044409.01.T01 AT5G26010 31.818 220 104 10 59 241 73 283 1.30e-14 73.2
MsG0880044409.01.T01 AT5G36250 33.516 182 101 8 96 259 183 362 3.02e-14 72.8
MsG0880044409.01.T01 AT3G51370 28.571 210 107 6 95 262 31 239 3.79e-14 71.2
MsG0880044409.01.T01 AT4G31860 37.705 122 59 4 119 229 160 275 8.80e-14 70.1
MsG0880044409.01.T01 AT5G59220 36.242 149 77 5 62 195 151 296 8.99e-14 70.5
MsG0880044409.01.T01 AT3G06270 23.828 256 154 8 59 274 88 342 1.50e-13 70.1
MsG0880044409.01.T01 AT1G03590 37.410 139 70 6 119 241 185 322 2.43e-13 70.1
MsG0880044409.01.T01 AT5G19280 27.675 271 161 12 32 274 314 577 3.27e-13 69.7
MsG0880044409.01.T01 AT5G66080 28.571 210 107 6 95 262 15 223 7.72e-13 67.4
MsG0880044409.01.T01 AT4G33920 29.327 208 101 7 95 259 15 219 8.27e-12 64.7
MsG0880044409.01.T01 AT2G05050 37.500 96 54 2 183 272 92 187 1.21e-11 62.8
MsG0880044409.01.T01 AT5G19280 26.690 281 161 13 32 274 314 587 2.89e-11 63.9

Find 72 sgRNAs with CRISPR-Local

Find 139 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTAATGTAGCCTGATTTC+TGG 0.158630 8:+41571155 MsG0880044409.01.T01:intron
ATATCATTGCTTTCTGTTGT+TGG 0.235574 8:-41571385 None:intergenic
TATTAGCCAGTGACGGATTA+TGG 0.240034 8:+41571974 MsG0880044409.01.T01:CDS
TGCTTTCTGTTGTTGGTTCA+TGG 0.265949 8:-41571378 None:intergenic
TTTAGAGAAATCAGGTGAAT+TGG 0.295823 8:+41571231 MsG0880044409.01.T01:CDS
GTTGGTGCAGGAGAAAGTTT+TGG 0.308161 8:+41570422 MsG0880044409.01.T01:CDS
AAGCTAGTGGTGGCCAATAT+CGG 0.310892 8:+41571301 MsG0880044409.01.T01:CDS
CTCTTTCCTTTCCCAGAGTC+CGG 0.338408 8:-41570456 None:intergenic
GGTTTATTTGCAATATTTGA+TGG 0.353198 8:+41570591 MsG0880044409.01.T01:CDS
TGGCCAATATCGGGGATTCT+CGG 0.361781 8:+41571311 MsG0880044409.01.T01:CDS
CTGAAGTCATGTGTACCTTT+AGG 0.369744 8:-41571903 None:intergenic
TTACTGAAGAAGCGCTTAAC+AGG 0.372627 8:+41572223 MsG0880044409.01.T01:CDS
AGCCCGAGAATCCCCGATAT+TGG 0.376877 8:-41571314 None:intergenic
AGCTAGTGGTGGCCAATATC+GGG 0.378723 8:+41571302 MsG0880044409.01.T01:CDS
TTAGAGAAATCAGGTGAATT+GGG 0.378847 8:+41571232 MsG0880044409.01.T01:CDS
GGGGATGTTCCACGGGTTGA+TGG 0.383140 8:+41571844 MsG0880044409.01.T01:intron
CATGGCTTTCACTTGGTAAA+GGG 0.396679 8:+41570501 MsG0880044409.01.T01:CDS
GGACCATCTGATCCGGACTC+TGG 0.401326 8:+41570444 MsG0880044409.01.T01:CDS
TTAGCAGTGTCAAGGGCATT+TGG 0.410576 8:+41571871 MsG0880044409.01.T01:CDS
CATGTTGATGACAACGAGTT+GGG 0.413559 8:+41570570 MsG0880044409.01.T01:CDS
TGCATTCATACAAATTACTT+TGG 0.422352 8:-41572489 None:intergenic
ATGCAATAAATATTTAGTAT+TGG 0.427129 8:+41572456 MsG0880044409.01.T01:three_prime_UTR
GGCCAATATCGGGGATTCTC+GGG 0.445298 8:+41571312 MsG0880044409.01.T01:CDS
TCATGGCTTTCACTTGGTAA+AGG 0.452390 8:+41570500 MsG0880044409.01.T01:CDS
GCAGGTTCAGTCCAGAAATC+AGG 0.467118 8:-41571166 None:intergenic
AATAAATATTTAGTATTGGA+TGG 0.467470 8:+41572460 MsG0880044409.01.T01:three_prime_UTR
TGCTTTCATTCAAACCAACT+TGG 0.468409 8:+41572410 MsG0880044409.01.T01:three_prime_UTR
GTTTGATAATATCTTAAAAG+AGG 0.468636 8:+41570656 MsG0880044409.01.T01:CDS
CGGGCTGTCTTATCTGAGAA+TGG 0.477872 8:+41571331 MsG0880044409.01.T01:CDS
TACCTTCCATAATCCGTCAC+TGG 0.483949 8:-41571980 None:intergenic
CGATTCAGGGGATGTTCCAC+GGG 0.498943 8:+41571837 MsG0880044409.01.T01:intron
TCGATTCAGGGGATGTTCCA+CGG 0.499734 8:+41571836 MsG0880044409.01.T01:intron
GACCATCTGATCCGGACTCT+GGG 0.506273 8:+41570445 MsG0880044409.01.T01:CDS
AGATGAGAACGCAAGTAATC+CGG 0.512819 8:-41570633 None:intergenic
AAATCAGGTGAATTGGGTAA+AGG 0.521064 8:+41571238 MsG0880044409.01.T01:CDS
CAACTGGAGAATGTTGGTGC+AGG 0.530094 8:+41570410 None:intergenic
GGATGCTATCAAAGATATCA+AGG 0.533539 8:+41572176 MsG0880044409.01.T01:CDS
GCATGTTGATGACAACGAGT+TGG 0.541511 8:+41570569 MsG0880044409.01.T01:CDS
TTCGTTATATTAGCCAGTGA+CGG 0.544773 8:+41571967 MsG0880044409.01.T01:CDS
TGAGCAGAATAACACCTCAA+TGG 0.546519 8:-41572358 None:intergenic
TTCCCAGAGTCCGGATCAGA+TGG 0.546662 8:-41570447 None:intergenic
AAGTTGGTTTGAATGAAAGC+AGG 0.549427 8:-41572408 None:intergenic
TCTGATCCGGACTCTGGGAA+AGG 0.550040 8:+41570450 MsG0880044409.01.T01:CDS
ATGTCAAAGCATGTAACTCA+TGG 0.561385 8:+41570483 MsG0880044409.01.T01:CDS
TGTAACTCATGGCTTTCACT+TGG 0.561706 8:+41570494 MsG0880044409.01.T01:CDS
ATGGACAGTTAGCAGTGTCA+AGG 0.584292 8:+41571863 MsG0880044409.01.T01:CDS
GCTCTCTTCACACTATCCGC+AGG 0.588529 8:-41571184 None:intergenic
AGCAACCACGTAGTCTTCCA+TGG 0.592925 8:-41570538 None:intergenic
ACATCTCTTGCGTTGTTGTG+AGG 0.595080 8:+41572259 MsG0880044409.01.T01:CDS
GGGTCAATCAAATCATGCCA+TGG 0.600430 8:+41570521 MsG0880044409.01.T01:CDS
ATTTGGCGACAAAAGCCTAA+AGG 0.604211 8:+41571888 MsG0880044409.01.T01:CDS
TGGACAGTTAGCAGTGTCAA+GGG 0.607927 8:+41571864 MsG0880044409.01.T01:CDS
CATGTCAAATCAAGAAGCAG+TGG 0.611552 8:+41572155 MsG0880044409.01.T01:CDS
AGCCAGTGACGGATTATGGA+AGG 0.612138 8:+41571978 MsG0880044409.01.T01:CDS
TCAGGTGAATTGGGTAAAGG+AGG 0.612943 8:+41571241 MsG0880044409.01.T01:CDS
AAACAACACAGTATCCAAGT+TGG 0.613452 8:-41572424 None:intergenic
TCACGCAGGTCATACTGTAC+CGG 0.619609 8:+41570614 MsG0880044409.01.T01:CDS
ATCGTCTTCACTGTCACATG+CGG 0.620460 8:-41571928 None:intergenic
TCAAAGATATCAAGGATGCT+CGG 0.621211 8:+41572184 MsG0880044409.01.T01:CDS
TTCAGTAAGATGCTTTGCTG+CGG 0.623020 8:-41572208 None:intergenic
GCAATATTTGATGGTCACGC+AGG 0.624491 8:+41570600 MsG0880044409.01.T01:CDS
CTGAAGAAGCGCTTAACAGG+AGG 0.643281 8:+41572226 MsG0880044409.01.T01:CDS
GCTAGTGGTGGCCAATATCG+GGG 0.654265 8:+41571303 MsG0880044409.01.T01:CDS
AATTAATTGTCAGAAGCTAG+TGG 0.661230 8:+41571288 MsG0880044409.01.T01:CDS
ATAAGTGTTGATATCCATTG+AGG 0.661954 8:+41572344 MsG0880044409.01.T01:three_prime_UTR
GCTAACTGTCCATCAACCCG+TGG 0.668653 8:-41571853 None:intergenic
TGATTTCTGGACTGAACCTG+CGG 0.674056 8:+41571168 MsG0880044409.01.T01:CDS
TAATTGTCAGAAGCTAGTGG+TGG 0.692489 8:+41571291 MsG0880044409.01.T01:CDS
TCATGCCATGGAAGACTACG+TGG 0.697697 8:+41570533 MsG0880044409.01.T01:CDS
GGTTCATGGTCAACTGACAG+TGG 0.714820 8:-41571364 None:intergenic
GTGAAGACGATAGATGACGG+TGG 0.737990 8:+41571940 MsG0880044409.01.T01:CDS
ACAGTGAAGACGATAGATGA+CGG 0.781656 8:+41571937 MsG0880044409.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGTAAAATATTTGATTAAA+TGG + Chr8:41571998-41572017 MsG0880044409.01.T01:intron 15.0%
!! ATGCAATAAATATTTAGTAT+TGG + Chr8:41572456-41572475 MsG0880044409.01.T01:three_prime_UTR 15.0%
!! GGTAAAATATTTGATTAAAT+GGG + Chr8:41571999-41572018 MsG0880044409.01.T01:intron 15.0%
!!! AATAAATATTTAGTATTGGA+TGG + Chr8:41572460-41572479 MsG0880044409.01.T01:three_prime_UTR 15.0%
!!! ATAATTTTTCAGTTTTTGTT+TGG - Chr8:41570940-41570959 None:intergenic 15.0%
!!! ATATTCTCATTTGTTATTAT+AGG + Chr8:41572131-41572150 MsG0880044409.01.T01:intron 15.0%
!! ATTATCAATTTCAATTCAAG+TGG + Chr8:41570955-41570974 MsG0880044409.01.T01:intron 20.0%
!!! ATTTATCTTTTTTCTACACT+TGG + Chr8:41571044-41571063 MsG0880044409.01.T01:intron 20.0%
!!! GTTTGATAATATCTTAAAAG+AGG + Chr8:41570656-41570675 MsG0880044409.01.T01:CDS 20.0%
! AAAACATGATATACTATACC+TGG - Chr8:41571442-41571461 None:intergenic 25.0%
! AAGGATACAGTTTATATCTA+AGG + Chr8:41571798-41571817 MsG0880044409.01.T01:intron 25.0%
! AATGATATAAAAAACAGAGG+TGG + Chr8:41571400-41571419 MsG0880044409.01.T01:CDS 25.0%
! ACTCTAAGTAATCACAAAAA+CGG - Chr8:41570694-41570713 None:intergenic 25.0%
! AGCAATGATATAAAAAACAG+AGG + Chr8:41571397-41571416 MsG0880044409.01.T01:CDS 25.0%
! ATATCTTAAAAGAGGTAATG+AGG + Chr8:41570664-41570683 MsG0880044409.01.T01:intron 25.0%
! CTGAAAATAATTTGAGAAGA+TGG - Chr8:41571701-41571720 None:intergenic 25.0%
! GGTTTATTTGCAATATTTGA+TGG + Chr8:41570591-41570610 MsG0880044409.01.T01:CDS 25.0%
! TCTATATGTTATTCAGTATC+TGG + Chr8:41571596-41571615 MsG0880044409.01.T01:intron 25.0%
! TGCATTCATACAAATTACTT+TGG - Chr8:41572492-41572511 None:intergenic 25.0%
!!! ACATATTTTGTTATCGATTC+AGG + Chr8:41571823-41571842 MsG0880044409.01.T01:intron 25.0%
!!! ATATTTTGTTATCGATTCAG+GGG + Chr8:41571825-41571844 MsG0880044409.01.T01:intron 25.0%
!!! CATATTTTGTTATCGATTCA+GGG + Chr8:41571824-41571843 MsG0880044409.01.T01:intron 25.0%
!!! TCTACTATTTTAGAGAAATC+AGG + Chr8:41571223-41571242 MsG0880044409.01.T01:CDS 25.0%
AAACTCTTGAAACATGCAAA+AGG - Chr8:41571016-41571035 None:intergenic 30.0%
AATTAATTGTCAGAAGCTAG+TGG + Chr8:41571288-41571307 MsG0880044409.01.T01:CDS 30.0%
ACCAAACATACATGTTTGAT+TGG + Chr8:41572081-41572100 MsG0880044409.01.T01:intron 30.0%
ATATCATTGCTTTCTGTTGT+TGG - Chr8:41571388-41571407 None:intergenic 30.0%
CAATGATGCATAGATATGTA+AGG - Chr8:41571548-41571567 None:intergenic 30.0%
CTCTAAGTAATCACAAAAAC+GGG - Chr8:41570693-41570712 None:intergenic 30.0%
GCATCAATACGTGATATTTA+AGG + Chr8:41571629-41571648 MsG0880044409.01.T01:intron 30.0%
GTGATTTCTCATAATGCATA+GGG - Chr8:41570810-41570829 None:intergenic 30.0%
TCCAATCAAACATGTATGTT+TGG - Chr8:41572085-41572104 None:intergenic 30.0%
TTAGAGAAATCAGGTGAATT+GGG + Chr8:41571232-41571251 MsG0880044409.01.T01:CDS 30.0%
TTTAGAGAAATCAGGTGAAT+TGG + Chr8:41571231-41571250 MsG0880044409.01.T01:CDS 30.0%
! CATAGATTAAGCCTATGTTT+TGG - Chr8:41570868-41570887 None:intergenic 30.0%
!! ATAAGTGTTGATATCCATTG+AGG + Chr8:41572344-41572363 MsG0880044409.01.T01:three_prime_UTR 30.0%
!! CTTGGTGAATGGATTTATTT+TGG + Chr8:41571062-41571081 MsG0880044409.01.T01:intron 30.0%
!! GTATTTTTACCGTATTCATC+TGG + Chr8:41571089-41571108 MsG0880044409.01.T01:intron 30.0%
!! TTTCAGTTTTTGTTTGGAAC+CGG - Chr8:41570934-41570953 None:intergenic 30.0%
!!! TTTTTTCTACACTTGGTGAA+TGG + Chr8:41571051-41571070 MsG0880044409.01.T01:intron 30.0%
AAAATAATTGCTCGTGGCTA+AGG + Chr8:41571779-41571798 MsG0880044409.01.T01:intron 35.0%
AAACAACACAGTATCCAAGT+TGG - Chr8:41572427-41572446 None:intergenic 35.0%
AAATCACCACCAATTTGCAT+TGG + Chr8:41570782-41570801 MsG0880044409.01.T01:intron 35.0%
AAATCAGGTGAATTGGGTAA+AGG + Chr8:41571238-41571257 MsG0880044409.01.T01:CDS 35.0%
AATCACCACCAATTTGCATT+GGG + Chr8:41570783-41570802 MsG0880044409.01.T01:intron 35.0%
ATGTCAAAGCATGTAACTCA+TGG + Chr8:41570483-41570502 MsG0880044409.01.T01:CDS 35.0%
ATTAAATGTCTCTACACCGA+AGG - Chr8:41571673-41571692 None:intergenic 35.0%
GGATGCTATCAAAGATATCA+AGG + Chr8:41572176-41572195 MsG0880044409.01.T01:CDS 35.0%
GGTGATTTCTCATAATGCAT+AGG - Chr8:41570811-41570830 None:intergenic 35.0%
GTTCCTAAAATAATTGCTCG+TGG + Chr8:41571773-41571792 MsG0880044409.01.T01:intron 35.0%
TCAAAGATATCAAGGATGCT+CGG + Chr8:41572184-41572203 MsG0880044409.01.T01:CDS 35.0%
TGCTTTCATTCAAACCAACT+TGG + Chr8:41572410-41572429 MsG0880044409.01.T01:three_prime_UTR 35.0%
TTCGTTATATTAGCCAGTGA+CGG + Chr8:41571967-41571986 MsG0880044409.01.T01:CDS 35.0%
! GAATAGCTGTATTGATGTAC+TGG + Chr8:41571519-41571538 MsG0880044409.01.T01:intron 35.0%
! TAGCCACGAGCAATTATTTT+AGG - Chr8:41571779-41571798 None:intergenic 35.0%
! TTTTGGCACACTTATGCATA+GGG - Chr8:41570851-41570870 None:intergenic 35.0%
!! AAGTTGGTTTGAATGAAAGC+AGG - Chr8:41572411-41572430 None:intergenic 35.0%
!! GGTTTTGTATCTAACTTTCC+AGG + Chr8:41571421-41571440 MsG0880044409.01.T01:CDS 35.0%
ACAGTGAAGACGATAGATGA+CGG + Chr8:41571937-41571956 MsG0880044409.01.T01:CDS 40.0%
AGATGAGAACGCAAGTAATC+CGG - Chr8:41570636-41570655 None:intergenic 40.0%
ATTCCTTTGCACTCACCTTA+TGG + Chr8:41572043-41572062 MsG0880044409.01.T01:intron 40.0%
ATTTGGCGACAAAAGCCTAA+AGG + Chr8:41571888-41571907 MsG0880044409.01.T01:CDS 40.0%
CATAGGGACACAATGCAAAT+TGG - Chr8:41570794-41570813 None:intergenic 40.0%
CATGGCTTTCACTTGGTAAA+GGG + Chr8:41570501-41570520 MsG0880044409.01.T01:CDS 40.0%
CATGTCAAATCAAGAAGCAG+TGG + Chr8:41572155-41572174 MsG0880044409.01.T01:CDS 40.0%
CCAACATCTCCAGATGAATA+CGG - Chr8:41571101-41571120 None:intergenic 40.0%
CTGAAGTCATGTGTACCTTT+AGG - Chr8:41571906-41571925 None:intergenic 40.0%
GCATAAGTGTGCCAAAACAT+AGG + Chr8:41570854-41570873 MsG0880044409.01.T01:intron 40.0%
GTCTAATGTAGCCTGATTTC+TGG + Chr8:41571155-41571174 MsG0880044409.01.T01:intron 40.0%
TAATTGTCAGAAGCTAGTGG+TGG + Chr8:41571291-41571310 MsG0880044409.01.T01:CDS 40.0%
TAGAAGCAAAACTGCCCATA+AGG - Chr8:41572061-41572080 None:intergenic 40.0%
TCATGGCTTTCACTTGGTAA+AGG + Chr8:41570500-41570519 MsG0880044409.01.T01:CDS 40.0%
TGACGTGTGTTTGATGTGAA+TGG - Chr8:41570734-41570753 None:intergenic 40.0%
TGAGCAGAATAACACCTCAA+TGG - Chr8:41572361-41572380 None:intergenic 40.0%
TGTAACTCATGGCTTTCACT+TGG + Chr8:41570494-41570513 MsG0880044409.01.T01:CDS 40.0%
TTCAGTAAGATGCTTTGCTG+CGG - Chr8:41572211-41572230 None:intergenic 40.0%
TTCCTTTGCACTCACCTTAT+GGG + Chr8:41572044-41572063 MsG0880044409.01.T01:intron 40.0%
TTGTCACTATCATGGTTGTG+TGG + Chr8:41571728-41571747 MsG0880044409.01.T01:intron 40.0%
! TTGGTGCAGGAGAAAGTTTT+GGG + Chr8:41570423-41570442 MsG0880044409.01.T01:CDS 40.0%
!! CATGTTGATGACAACGAGTT+GGG + Chr8:41570570-41570589 MsG0880044409.01.T01:CDS 40.0%
!! GTTTTGGCACACTTATGCAT+AGG - Chr8:41570852-41570871 None:intergenic 40.0%
!! TATTAGCCAGTGACGGATTA+TGG + Chr8:41571974-41571993 MsG0880044409.01.T01:CDS 40.0%
!! TGCTTTCTGTTGTTGGTTCA+TGG - Chr8:41571381-41571400 None:intergenic 40.0%
!! TTACTGAAGAAGCGCTTAAC+AGG + Chr8:41572223-41572242 MsG0880044409.01.T01:CDS 40.0%
AAGCTAGTGGTGGCCAATAT+CGG + Chr8:41571301-41571320 MsG0880044409.01.T01:CDS 45.0%
ACATCTCTTGCGTTGTTGTG+AGG + Chr8:41572259-41572278 MsG0880044409.01.T01:CDS 45.0%
AGGGACACAATGCAAATTGG+TGG - Chr8:41570791-41570810 None:intergenic 45.0%
ATCGTCTTCACTGTCACATG+CGG - Chr8:41571931-41571950 None:intergenic 45.0%
ATGGACAGTTAGCAGTGTCA+AGG + Chr8:41571863-41571882 MsG0880044409.01.T01:CDS 45.0%
CATAGGGACCCAATGCAAAT+TGG - Chr8:41570835-41570854 None:intergenic 45.0%
CCGTATTCATCTGGAGATGT+TGG + Chr8:41571098-41571117 MsG0880044409.01.T01:intron 45.0%
GCGTCTACTTGTCACTATCA+TGG + Chr8:41571720-41571739 MsG0880044409.01.T01:intron 45.0%
GGGTCAATCAAATCATGCCA+TGG + Chr8:41570521-41570540 MsG0880044409.01.T01:CDS 45.0%
TACCTTCCATAATCCGTCAC+TGG - Chr8:41571983-41572002 None:intergenic 45.0%
TCAGGTGAATTGGGTAAAGG+AGG + Chr8:41571241-41571260 MsG0880044409.01.T01:CDS 45.0%
TGGACAGTTAGCAGTGTCAA+GGG + Chr8:41571864-41571883 MsG0880044409.01.T01:CDS 45.0%
! GCAATATTTGATGGTCACGC+AGG + Chr8:41570600-41570619 MsG0880044409.01.T01:CDS 45.0%
! GTTGGTGCAGGAGAAAGTTT+TGG + Chr8:41570422-41570441 MsG0880044409.01.T01:CDS 45.0%
! TGATTTCTGGACTGAACCTG+CGG + Chr8:41571168-41571187 MsG0880044409.01.T01:CDS 45.0%
!! GCATGTTGATGACAACGAGT+TGG + Chr8:41570569-41570588 MsG0880044409.01.T01:CDS 45.0%
!! GTTTTTGTTTGGAACCGGCA+TGG - Chr8:41570929-41570948 None:intergenic 45.0%
!! TTAGCAGTGTCAAGGGCATT+TGG + Chr8:41571871-41571890 MsG0880044409.01.T01:CDS 45.0%
!!! AGTTTTGGGACCATCTGATC+CGG + Chr8:41570437-41570456 MsG0880044409.01.T01:CDS 45.0%
!!! CATCTGGAGATGTTGGCTTT+TGG + Chr8:41571105-41571124 MsG0880044409.01.T01:intron 45.0%
AGCAACCACGTAGTCTTCCA+TGG - Chr8:41570541-41570560 None:intergenic 50.0%
AGCTAGTGGTGGCCAATATC+GGG + Chr8:41571302-41571321 MsG0880044409.01.T01:CDS 50.0%
AGGGACCCAATGCAAATTGG+TGG - Chr8:41570832-41570851 None:intergenic 50.0%
CGGGCTGTCTTATCTGAGAA+TGG + Chr8:41571331-41571350 MsG0880044409.01.T01:CDS 50.0%
CTCTTTCCTTTCCCAGAGTC+CGG - Chr8:41570459-41570478 None:intergenic 50.0%
GCAGGTTCAGTCCAGAAATC+AGG - Chr8:41571169-41571188 None:intergenic 50.0%
GGCTAGGGGTAATGCATTTC+AGG - Chr8:41570908-41570927 None:intergenic 50.0%
GGTTCATGGTCAACTGACAG+TGG - Chr8:41571367-41571386 None:intergenic 50.0%
TCACGCAGGTCATACTGTAC+CGG + Chr8:41570614-41570633 MsG0880044409.01.T01:CDS 50.0%
TCATGCCATGGAAGACTACG+TGG + Chr8:41570533-41570552 MsG0880044409.01.T01:CDS 50.0%
TCGATTCAGGGGATGTTCCA+CGG + Chr8:41571836-41571855 MsG0880044409.01.T01:intron 50.0%
TGCCCATAAGGTGAGTGCAA+AGG - Chr8:41572049-41572068 None:intergenic 50.0%
TGGCCAATATCGGGGATTCT+CGG + Chr8:41571311-41571330 MsG0880044409.01.T01:CDS 50.0%
! GTGAAGACGATAGATGACGG+TGG + Chr8:41571940-41571959 MsG0880044409.01.T01:CDS 50.0%
! TGTCTCTACACCGAAGGTGT+TGG - Chr8:41571667-41571686 None:intergenic 50.0%
!! AGCCAGTGACGGATTATGGA+AGG + Chr8:41571978-41571997 MsG0880044409.01.T01:CDS 50.0%
!! CTGAAGAAGCGCTTAACAGG+AGG + Chr8:41572226-41572245 MsG0880044409.01.T01:CDS 50.0%
!! TACACCGAAGGTGTTGGACA+CGG - Chr8:41571661-41571680 None:intergenic 50.0%
AGCCCGAGAATCCCCGATAT+TGG - Chr8:41571317-41571336 None:intergenic 55.0%
CGATTCAGGGGATGTTCCAC+GGG + Chr8:41571837-41571856 MsG0880044409.01.T01:intron 55.0%
GACCATCTGATCCGGACTCT+GGG + Chr8:41570445-41570464 MsG0880044409.01.T01:CDS 55.0%
GCTAACTGTCCATCAACCCG+TGG - Chr8:41571856-41571875 None:intergenic 55.0%
GCTAGTGGTGGCCAATATCG+GGG + Chr8:41571303-41571322 MsG0880044409.01.T01:CDS 55.0%
GCTCTCTTCACACTATCCGC+AGG - Chr8:41571187-41571206 None:intergenic 55.0%
GGCCAATATCGGGGATTCTC+GGG + Chr8:41571312-41571331 MsG0880044409.01.T01:CDS 55.0%
TGCATTACCCCTAGCCATGC+CGG + Chr8:41570912-41570931 MsG0880044409.01.T01:intron 55.0%
TGTCCCGTGTCCAACACCTT+CGG + Chr8:41571654-41571673 MsG0880044409.01.T01:intron 55.0%
TTCCCAGAGTCCGGATCAGA+TGG - Chr8:41570450-41570469 None:intergenic 55.0%
! GTTTGGAACCGGCATGGCTA+GGG - Chr8:41570923-41570942 None:intergenic 55.0%
! TCTGATCCGGACTCTGGGAA+AGG + Chr8:41570450-41570469 MsG0880044409.01.T01:CDS 55.0%
! TGTTTGGAACCGGCATGGCT+AGG - Chr8:41570924-41570943 None:intergenic 55.0%
! TTTGGAACCGGCATGGCTAG+GGG - Chr8:41570922-41570941 None:intergenic 55.0%
!! ACACCGAAGGTGTTGGACAC+GGG - Chr8:41571660-41571679 None:intergenic 55.0%
GGACCATCTGATCCGGACTC+TGG + Chr8:41570444-41570463 MsG0880044409.01.T01:CDS 60.0%
! GGGGATGTTCCACGGGTTGA+TGG + Chr8:41571844-41571863 MsG0880044409.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 41570420 41572537 41570420 ID=MsG0880044409.01;Name=MsG0880044409.01
Chr8 mRNA 41570420 41572537 41570420 ID=MsG0880044409.01.T01;Parent=MsG0880044409.01;Name=MsG0880044409.01.T01;_AED=0.48;_eAED=0.49;_QI=0|1|0.75|1|1|1|4|247|275
Chr8 exon 41572153 41572537 41572153 ID=MsG0880044409.01.T01:exon:16725;Parent=MsG0880044409.01.T01
Chr8 exon 41571845 41571999 41571845 ID=MsG0880044409.01.T01:exon:16724;Parent=MsG0880044409.01.T01
Chr8 exon 41571166 41571442 41571166 ID=MsG0880044409.01.T01:exon:16723;Parent=MsG0880044409.01.T01
Chr8 exon 41570420 41570677 41570420 ID=MsG0880044409.01.T01:exon:16722;Parent=MsG0880044409.01.T01
Chr8 CDS 41570420 41570677 41570420 ID=MsG0880044409.01.T01:cds;Parent=MsG0880044409.01.T01
Chr8 CDS 41571166 41571442 41571166 ID=MsG0880044409.01.T01:cds;Parent=MsG0880044409.01.T01
Chr8 CDS 41571845 41571999 41571845 ID=MsG0880044409.01.T01:cds;Parent=MsG0880044409.01.T01
Chr8 CDS 41572153 41572290 41572153 ID=MsG0880044409.01.T01:cds;Parent=MsG0880044409.01.T01
Chr8 three_prime_UTR 41572291 41572537 41572291 ID=MsG0880044409.01.T01:three_prime_utr;Parent=MsG0880044409.01.T01
Gene Sequence

>MsG0880044409.01.T01

ATGTTGGTGCAGGAGAAAGTTTTGGGACCATCTGATCCGGACTCTGGGAAAGGAAAGAGCAAGATGTCAAAGCATGTAACTCATGGCTTTCACTTGGTAAAGGGTCAATCAAATCATGCCATGGAAGACTACGTGGTTGCTGAATTCAAGCATGTTGATGACAACGAGTTGGGTTTATTTGCAATATTTGATGGTCACGCAGGTCATACTGTACCGGATTACTTGCGTTCTCATCTGTTTGATAATATCTTAAAAGAGCCTGATTTCTGGACTGAACCTGCGGATAGTGTGAAGAGAGCATATAAAGAAACTGATTCTACTATTTTAGAGAAATCAGGTGAATTGGGTAAAGGAGGTTCAACTGCAGTTACAGCAATACTAATTAATTGTCAGAAGCTAGTGGTGGCCAATATCGGGGATTCTCGGGCTGTCTTATCTGAGAATGGTGTTGCTATACCACTGTCAGTTGACCATGAACCAACAACAGAAAGCAATGATATAAAAAACAGAGGTGGTTTTGTATCTAACTTTCCAGGGGATGTTCCACGGGTTGATGGACAGTTAGCAGTGTCAAGGGCATTTGGCGACAAAAGCCTAAAGGTACACATGACTTCAGAACCGCATGTGACAGTGAAGACGATAGATGACGGTGGAGAGTTCGTTATATTAGCCAGTGACGGATTATGGAAGGTCATGTCAAATCAAGAAGCAGTGGATGCTATCAAAGATATCAAGGATGCTCGGTCCGCAGCAAAGCATCTTACTGAAGAAGCGCTTAACAGGAGGAGCTCAGATGACATCTCTTGCGTTGTTGTGAGGTTTCACTGA

Protein sequence

>MsG0880044409.01.T01

MLVQEKVLGPSDPDSGKGKSKMSKHVTHGFHLVKGQSNHAMEDYVVAEFKHVDDNELGLFAIFDGHAGHTVPDYLRSHLFDNILKEPDFWTEPADSVKRAYKETDSTILEKSGELGKGGSTAVTAILINCQKLVVANIGDSRAVLSENGVAIPLSVDHEPTTESNDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKVHMTSEPHVTVKTIDDGGEFVILASDGLWKVMSNQEAVDAIKDIKDARSAAKHLTEEALNRRSSDDISCVVVRFH*