AlfalfaGEDB | MsG0380016612.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016612.01

KEGG: -
GO: -
PFAM: PF13839 PF14416

Nr:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016612.01.T01	XP_003602148.1	98.985	197	2	1	197	142	338	2.00E-139	407
MsG0380016612.01.T02	XP_003602148.1	97.814	183	4	1	183	135	317	4.50E-127	375
MsG0380016612.01.T03	XP_003602148.1	98.98	98	1	1	98	220	317	8.70E-60	199

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016612.01.T01	F4I037	65.464	194	67	0	4	197	127	320	4.76E-93	281
MsG0380016612.01.T02	F4I037	64.286	182	61	1	1	182	121	298	2.44E-84	258
MsG0380016612.01.T03	F4I037	63.918	97	35	0	1	97	202	298	2.28E-38	135

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016612.01.T01	G7J655	98.985	197	2	1	197	142	338	9.55e-140	407
MsG0380016612.01.T02	G7J655	97.814	183	4	1	183	135	317	2.15e-127	375
MsG0380016612.01.T03	G7J655	98.980	98	1	1	98	220	317	4.16e-60	199

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000787.01	MsG0380016612.01	0.815306	9.891879e-52	6.795169e-49
MsG0180003741.01	MsG0380016612.01	0.805781	1.131225e-49	6.037940e-47
MsG0180005113.01	MsG0380016612.01	0.822354	2.477803e-53	2.069053e-50
MsG0180005153.01	MsG0380016612.01	0.825244	5.210687e-54	4.723403e-51
MsG0180006017.01	MsG0380016612.01	0.809644	1.709283e-50	1.009133e-47
MsG0180006096.01	MsG0380016612.01	0.800792	1.220552e-48	5.734277e-46
MsG0180006225.01	MsG0380016612.01	0.813138	2.978659e-51	1.929253e-48
MsG0380014875.01	MsG0380016612.01	0.802566	5.279527e-49	2.594519e-46
MsG0380014948.01	MsG0380016612.01	0.807981	3.875491e-50	2.189373e-47
MsG0380015870.01	MsG0380016612.01	0.800406	1.463306e-48	6.808085e-46
MsG0380016387.01	MsG0380016612.01	0.803907	2.786334e-49	1.417249e-46
MsG0380016505.01	MsG0380016612.01	0.800114	1.677155e-48	7.745276e-46
MsG0380016612.01	MsG0380017244.01	0.816041	6.783179e-52	4.754830e-49
MsG0380016612.01	MsG0480021195.01	0.819714	1.004481e-52	7.789790e-50
MsG0380016612.01	MsG0480022355.01	0.810433	1.155414e-50	6.963537e-48
MsG0380016612.01	MsG0480023172.01	0.803740	3.017596e-49	1.528261e-46
MsG0380016612.01	MsG0480023221.01	0.800061	1.719730e-48	7.931296e-46
MsG0380016612.01	MsG0580025332.01	0.835493	1.625104e-56	1.990513e-53
MsG0380016612.01	MsG0580028582.01	0.802428	5.637192e-49	2.760792e-46
MsG0380016612.01	MsG0580029736.01	0.831286	1.819548e-55	1.965546e-52
MsG0380016612.01	MsG0680030784.01	0.808317	3.286016e-50	1.872993e-47
MsG0380016612.01	MsG0680030908.01	0.802888	4.530232e-49	2.244745e-46
MsG0380016612.01	MsG0680034913.01	0.833635	4.762589e-56	5.516792e-53
MsG0380016612.01	MsG0780036757.01	0.814089	1.839492e-51	1.222648e-48
MsG0380016612.01	MsG0780037341.01	0.800933	1.142196e-48	5.385817e-46
MsG0380016612.01	MsG0780039155.01	0.807925	3.982698e-50	2.246558e-47
MsG0380016612.01	MsG0780039443.01	0.810740	9.919913e-51	6.028080e-48
MsG0380016612.01	MsG0780040430.01	0.816965	4.211969e-52	3.028189e-49
MsG0380016612.01	MsG0780041259.01	0.805545	1.267522e-49	6.724235e-47
MsG0380016612.01	MsG0780041440.01	0.809649	1.704983e-50	1.006719e-47
MsG0380016612.01	MsG0780041482.01	0.801775	7.677962e-49	3.698078e-46
MsG0380016612.01	MsG0780041634.01	0.812642	3.825405e-51	2.445385e-48
MsG0380016612.01	MsG0780041699.01	0.802652	5.069288e-49	2.496656e-46
MsG0380016612.01	MsG0880041834.01	0.805366	1.382091e-49	7.298505e-47
MsG0380016612.01	MsG0880043521.01	0.808470	3.049281e-50	1.745021e-47
MsG0380016612.01	MsG0880045294.01	0.809938	1.477239e-50	8.788920e-48
MsG0380016612.01	MsG0880047538.01	0.832291	1.027913e-55	1.143768e-52
MsG0380016612.01	MsG0880047696.01	0.807054	6.096158e-50	3.361748e-47
MsG0280007432.01	MsG0380016612.01	0.813956	1.968250e-51	1.303514e-48
MsG0280008108.01	MsG0380016612.01	0.801845	7.429281e-49	3.584780e-46
MsG0280010082.01	MsG0380016612.01	0.800306	1.533041e-48	7.114766e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016612.01.T01	MTR_3g090120	98.985	197	2	0	1	197	142	338	2.42e-143	407
MsG0380016612.01.T01	MTR_8g093530	66.839	193	64	0	5	197	103	295	1.20e-94	283
MsG0380016612.01.T01	MTR_7g094750	55.155	194	87	0	4	197	103	296	5.39e-79	239
MsG0380016612.01.T01	MTR_7g094750	55.155	194	87	0	4	197	103	296	9.12e-78	240
MsG0380016612.01.T01	MTR_2g022560	48.454	194	100	0	5	198	110	303	1.31e-65	209
MsG0380016612.01.T01	MTR_1g058380	43.367	196	110	1	3	198	69	263	7.34e-59	190
MsG0380016612.01.T01	MTR_7g109550	44.949	198	107	2	1	198	146	341	2.75e-58	190
MsG0380016612.01.T01	MTR_5g059400	40.513	195	115	1	4	198	187	380	2.66e-50	171
MsG0380016612.01.T01	MTR_1g116130	40.513	195	115	1	4	198	187	380	2.66e-50	171
MsG0380016612.01.T01	MTR_4g126950	42.308	182	104	1	5	186	122	302	3.33e-50	169
MsG0380016612.01.T01	MTR_4g121560	41.146	192	113	0	7	198	130	321	1.28e-48	165
MsG0380016612.01.T01	MTR_5g033800	39.896	193	114	1	4	196	157	347	1.56e-48	162
MsG0380016612.01.T01	MTR_5g033800	39.896	193	114	1	4	196	157	347	1.16e-47	163
MsG0380016612.01.T01	MTR_7g093450	40.909	198	116	1	4	201	260	456	6.26e-47	162
MsG0380016612.01.T01	MTR_8g069790	42.935	184	101	2	4	186	190	370	3.58e-46	159
MsG0380016612.01.T01	MTR_0136s0010	39.487	195	117	1	4	198	182	375	1.07e-43	153
MsG0380016612.01.T01	MTR_2g073500	41.414	198	101	5	2	197	44	228	9.95e-42	144
MsG0380016612.01.T01	MTR_5g071350	38.743	191	102	5	1	190	67	243	5.17e-39	138
MsG0380016612.01.T01	MTR_1g111010	39.796	196	98	7	5	197	46	224	8.68e-39	136
MsG0380016612.01.T01	MTR_3g464570	38.122	181	97	4	4	183	55	221	1.70e-38	136
MsG0380016612.01.T01	MTR_2g022580	47.967	123	64	0	52	174	2	124	9.26e-38	127
MsG0380016612.01.T01	MTR_3g049330	41.860	172	84	4	1	171	40	196	4.44e-37	132
MsG0380016612.01.T01	MTR_3g021060	36.548	197	111	4	1	197	55	237	6.72e-37	132
MsG0380016612.01.T01	MTR_5g034810	42.857	168	80	5	4	171	47	198	1.41e-36	131
MsG0380016612.01.T01	MTR_2g073510	41.709	199	95	7	4	198	45	226	2.27e-36	130
MsG0380016612.01.T01	MTR_4g088030	41.237	194	98	5	4	196	45	223	4.02e-36	129
MsG0380016612.01.T01	MTR_3g021090	35.678	199	110	4	1	197	40	222	6.76e-36	130
MsG0380016612.01.T01	MTR_1g050448	34.848	198	116	3	1	198	62	246	1.75e-35	128
MsG0380016612.01.T01	MTR_4g079700	39.181	171	90	3	1	171	56	212	2.33e-35	128
MsG0380016612.01.T01	MTR_3g035830	34.673	199	112	4	1	197	40	222	2.47e-35	127
MsG0380016612.01.T01	MTR_4g087730	41.243	177	89	4	4	180	57	218	2.54e-35	128
MsG0380016612.01.T01	MTR_1g112210	35.644	202	109	5	1	198	68	252	8.63e-35	127
MsG0380016612.01.T01	MTR_4g014440	36.842	171	101	2	4	173	75	239	9.17e-35	127
MsG0380016612.01.T01	MTR_2g015720	40.957	188	94	6	4	190	54	225	9.55e-35	126
MsG0380016612.01.T01	MTR_8g463790	36.994	173	100	2	4	175	84	248	3.42e-34	125
MsG0380016612.01.T01	MTR_2g091175	39.181	171	90	3	1	171	59	215	6.81e-34	124
MsG0380016612.01.T01	MTR_7g070060	36.364	176	104	3	4	178	77	245	7.53e-34	123
MsG0380016612.01.T01	MTR_7g070060	36.364	176	104	3	4	178	77	245	4.81e-33	122
MsG0380016612.01.T01	MTR_1g112210	35.000	200	100	4	1	198	68	239	1.03e-32	121
MsG0380016612.01.T01	MTR_3g070900	36.686	169	98	2	4	171	119	279	1.72e-32	122
MsG0380016612.01.T01	MTR_7g068920	35.503	169	90	3	6	168	95	250	1.08e-31	119
MsG0380016612.01.T01	MTR_4g016940	34.146	164	99	2	6	168	101	256	1.51e-31	119
MsG0380016612.01.T01	MTR_6g061710	39.773	176	93	5	1	174	176	340	1.61e-31	120
MsG0380016612.01.T01	MTR_5g082880	34.104	173	108	2	4	176	178	344	4.28e-30	116
MsG0380016612.01.T01	MTR_4g014430	32.121	165	105	1	4	168	121	278	1.03e-29	114
MsG0380016612.01.T01	MTR_5g083260	34.146	164	99	2	6	168	98	253	1.34e-29	114
MsG0380016612.01.T01	MTR_3g071650	33.742	163	101	1	6	168	104	259	6.65e-29	112
MsG0380016612.01.T01	MTR_1g076690	39.766	171	90	6	6	174	237	396	1.70e-28	112
MsG0380016612.01.T01	MTR_5g035090	33.526	173	105	3	6	177	97	260	8.37e-26	103
MsG0380016612.01.T01	MTR_5g035150	34.118	170	103	3	6	174	99	260	2.07e-25	102
MsG0380016612.01.T01	MTR_7g033230	36.585	164	92	5	6	168	348	500	1.72e-24	100
MsG0380016612.01.T01	MTR_8g104970	35.152	165	95	5	6	169	134	287	2.93e-24	99.8
MsG0380016612.01.T01	MTR_3g109840	33.523	176	97	5	6	177	87	246	4.11e-24	99.0
MsG0380016612.01.T01	MTR_7g033230	35.152	165	93	4	6	168	278	430	7.16e-24	99.0
MsG0380016612.01.T01	MTR_5g035080	34.146	164	95	5	6	168	89	240	6.54e-23	95.5
MsG0380016612.01.T01	MTR_2g016060	32.558	172	111	4	6	174	69	238	9.41e-22	92.0
MsG0380016612.01.T01	MTR_6g016880	33.918	171	104	4	6	174	92	255	1.42e-21	91.7
MsG0380016612.01.T01	MTR_8g099300	31.250	176	102	5	6	174	88	251	3.45e-21	90.5
MsG0380016612.01.T01	MTR_8g027900	29.143	175	111	4	4	174	223	388	3.81e-21	90.9
MsG0380016612.01.T01	MTR_5g035120	46.667	75	40	0	6	80	89	163	1.63e-20	84.7
MsG0380016612.01.T01	MTR_4g092830	32.597	181	95	7	6	173	63	229	2.34e-20	88.2
MsG0380016612.01.T01	MTR_6g007777	30.460	174	107	4	8	177	133	296	5.18e-20	87.4
MsG0380016612.01.T01	MTR_7g019120	31.214	173	106	4	6	174	93	256	1.69e-19	85.9
MsG0380016612.01.T01	MTR_8g093870	29.255	188	123	5	6	185	147	332	4.96e-19	84.7
MsG0380016612.01.T01	MTR_3g464570	37.984	129	65	5	56	183	3	117	5.60e-19	82.8
MsG0380016612.01.T01	MTR_5g035070	32.370	173	108	3	6	177	101	265	3.42e-18	82.4
MsG0380016612.01.T01	MTR_4g125060	29.032	186	124	4	5	183	145	329	3.91e-18	82.0
MsG0380016612.01.T01	MTR_4g125060	29.032	186	124	4	5	183	184	368	5.71e-18	81.6
MsG0380016612.01.T01	MTR_4g125060	29.032	186	124	4	5	183	213	397	6.00e-18	81.6
MsG0380016612.01.T01	MTR_7g019140	44.000	75	42	0	6	80	93	167	2.99e-17	76.3
MsG0380016612.01.T01	MTR_6g016875	30.994	171	112	3	6	174	78	244	2.05e-16	77.0
MsG0380016612.01.T01	MTR_7g070060	31.618	136	85	3	44	178	15	143	4.34e-15	72.8
MsG0380016612.01.T02	MTR_3g090120	97.814	183	4	0	1	183	135	317	5.45e-131	375
MsG0380016612.01.T02	MTR_8g093530	64.088	181	61	1	1	181	96	272	2.23e-84	255
MsG0380016612.01.T02	MTR_7g094750	54.645	183	79	1	1	183	97	275	1.18e-71	219
MsG0380016612.01.T02	MTR_7g094750	54.645	183	79	1	1	183	97	275	1.84e-70	220
MsG0380016612.01.T02	MTR_2g022560	48.045	179	89	1	1	179	103	277	7.66e-59	190
MsG0380016612.01.T02	MTR_7g109550	48.315	178	86	3	2	179	144	315	1.69e-55	182
MsG0380016612.01.T02	MTR_1g058380	44.944	178	96	2	2	179	62	237	2.88e-55	180
MsG0380016612.01.T02	MTR_4g126950	42.458	179	98	2	1	179	115	288	4.91e-51	170
MsG0380016612.01.T02	MTR_4g121560	45.251	179	95	1	1	179	120	295	3.95e-50	168
MsG0380016612.01.T02	MTR_5g059400	43.407	182	98	2	1	182	181	357	1.44e-49	167
MsG0380016612.01.T02	MTR_1g116130	43.407	182	98	2	1	182	181	357	1.44e-49	167
MsG0380016612.01.T02	MTR_5g033800	42.458	179	97	2	1	179	151	323	3.03e-49	164
MsG0380016612.01.T02	MTR_5g033800	42.458	179	97	2	1	179	151	323	3.66e-48	163
MsG0380016612.01.T02	MTR_8g069790	45.251	179	90	4	2	179	185	356	8.61e-47	160
MsG0380016612.01.T02	MTR_7g093450	44.382	178	94	2	2	179	255	427	1.75e-46	160
MsG0380016612.01.T02	MTR_0136s0010	41.573	178	99	2	2	179	177	349	7.76e-43	150
MsG0380016612.01.T02	MTR_2g073500	41.989	181	89	6	1	178	35	202	8.22e-41	141
MsG0380016612.01.T02	MTR_3g464570	38.983	177	91	3	1	177	49	208	3.44e-40	140
MsG0380016612.01.T02	MTR_5g071350	40.678	177	88	4	1	177	64	223	2.03e-39	138
MsG0380016612.01.T02	MTR_1g111010	41.436	181	85	7	1	178	38	200	1.65e-38	135
MsG0380016612.01.T02	MTR_2g022580	47.967	123	64	0	59	181	2	124	4.71e-38	127
MsG0380016612.01.T02	MTR_5g034810	42.373	177	82	6	2	178	42	198	6.15e-38	134
MsG0380016612.01.T02	MTR_3g049330	41.520	171	86	3	8	178	40	196	2.78e-37	132
MsG0380016612.01.T02	MTR_4g088030	41.573	178	86	4	1	178	39	198	1.27e-36	130
MsG0380016612.01.T02	MTR_3g021060	37.640	178	93	5	1	178	52	211	6.67e-36	128
MsG0380016612.01.T02	MTR_4g079700	39.181	171	90	3	8	178	56	212	8.15e-36	128
MsG0380016612.01.T02	MTR_2g073510	42.938	177	82	6	2	177	40	198	2.02e-35	127
MsG0380016612.01.T02	MTR_4g087730	41.317	167	84	3	11	177	57	209	2.60e-35	127
MsG0380016612.01.T02	MTR_4g014440	36.111	180	105	3	2	180	69	239	5.10e-35	127
MsG0380016612.01.T02	MTR_8g463790	36.264	182	104	3	2	182	78	248	7.41e-35	127
MsG0380016612.01.T02	MTR_2g015720	40.678	177	86	5	1	177	48	205	1.91e-34	124
MsG0380016612.01.T02	MTR_2g091175	39.181	171	90	3	8	178	59	215	3.40e-34	124
MsG0380016612.01.T02	MTR_3g021090	36.612	183	94	5	1	181	37	199	4.10e-34	124
MsG0380016612.01.T02	MTR_7g070060	37.222	180	97	5	2	177	71	238	4.38e-34	122
MsG0380016612.01.T02	MTR_1g112210	38.286	175	87	5	8	178	68	225	4.43e-34	124
MsG0380016612.01.T02	MTR_3g035830	35.519	183	96	5	1	181	37	199	1.38e-33	122
MsG0380016612.01.T02	MTR_1g050448	36.842	171	95	3	8	178	62	219	1.62e-33	122
MsG0380016612.01.T02	MTR_3g070900	35.955	178	102	3	2	178	113	279	2.87e-33	123
MsG0380016612.01.T02	MTR_7g070060	36.158	177	103	3	2	177	71	238	2.87e-33	122
MsG0380016612.01.T02	MTR_1g112210	37.572	173	78	4	8	178	68	212	5.91e-32	118
MsG0380016612.01.T02	MTR_7g068920	35.503	169	90	3	13	175	95	250	7.37e-32	119
MsG0380016612.01.T02	MTR_6g061710	39.773	176	93	5	8	181	176	340	9.98e-32	119
MsG0380016612.01.T02	MTR_4g016940	34.146	164	99	2	13	175	101	256	1.05e-31	118
MsG0380016612.01.T02	MTR_5g082880	33.516	182	112	3	2	183	172	344	8.13e-31	117
MsG0380016612.01.T02	MTR_3g071650	32.571	175	108	2	1	175	95	259	3.36e-30	114
MsG0380016612.01.T02	MTR_4g014430	31.609	174	109	2	2	175	115	278	4.19e-30	114
MsG0380016612.01.T02	MTR_5g083260	33.143	175	105	3	2	175	90	253	5.76e-30	114
MsG0380016612.01.T02	MTR_1g076690	40.351	171	89	6	13	181	237	396	1.57e-29	114
MsG0380016612.01.T02	MTR_5g035150	34.118	170	103	3	13	181	99	260	8.84e-26	102
MsG0380016612.01.T02	MTR_5g035090	33.529	170	103	3	13	181	97	257	1.26e-25	102
MsG0380016612.01.T02	MTR_7g033230	35.227	176	98	6	1	175	340	500	5.83e-25	101
MsG0380016612.01.T02	MTR_7g033230	35.227	176	98	6	1	175	270	430	9.66e-25	100
MsG0380016612.01.T02	MTR_3g109840	32.609	184	100	6	2	181	80	243	1.35e-24	99.4
MsG0380016612.01.T02	MTR_8g104970	33.898	177	101	6	1	176	126	287	1.37e-24	99.8
MsG0380016612.01.T02	MTR_5g035080	33.714	175	99	6	2	175	82	240	1.09e-23	97.1
MsG0380016612.01.T02	MTR_8g027900	29.348	184	113	5	2	181	218	388	5.66e-22	92.4
MsG0380016612.01.T02	MTR_2g016060	32.558	172	111	4	13	181	69	238	9.80e-22	91.3
MsG0380016612.01.T02	MTR_6g016880	33.918	171	104	4	13	181	92	255	1.13e-21	91.3
MsG0380016612.01.T02	MTR_4g092830	31.606	193	102	8	1	180	54	229	2.81e-21	90.1
MsG0380016612.01.T02	MTR_8g099300	31.250	176	102	5	13	181	88	251	3.04e-21	90.1
MsG0380016612.01.T02	MTR_5g035120	43.678	87	45	1	1	87	81	163	8.30e-21	84.7
MsG0380016612.01.T02	MTR_7g019120	31.214	173	106	4	13	181	93	256	1.16e-19	85.5
MsG0380016612.01.T02	MTR_6g007777	30.539	167	102	4	15	177	133	289	1.23e-19	85.9
MsG0380016612.01.T02	MTR_3g464570	38.793	116	58	3	62	177	2	104	5.87e-19	82.0
MsG0380016612.01.T02	MTR_5g035070	32.353	170	106	3	13	181	101	262	1.78e-18	82.4
MsG0380016612.01.T02	MTR_8g093870	30.114	176	113	5	13	180	147	320	2.02e-18	82.4
MsG0380016612.01.T02	MTR_7g019140	44.000	75	42	0	13	87	93	167	1.41e-17	76.3
MsG0380016612.01.T02	MTR_4g125060	28.495	186	121	5	2	180	139	319	2.40e-17	79.3
MsG0380016612.01.T02	MTR_4g125060	28.495	186	121	5	2	180	207	387	3.47e-17	79.0
MsG0380016612.01.T02	MTR_4g125060	28.495	186	121	5	2	180	178	358	3.85e-17	78.6
MsG0380016612.01.T02	MTR_6g016875	30.994	171	112	3	13	181	78	244	3.35e-16	75.9
MsG0380016612.01.T02	MTR_6g016240	30.052	193	112	8	2	182	78	259	1.07e-15	74.3
MsG0380016612.01.T02	MTR_7g070060	32.031	128	80	2	51	177	15	136	4.51e-15	72.0
MsG0380016612.01.T03	MTR_3g090120	98.980	98	1	0	1	98	220	317	1.05e-63	199
MsG0380016612.01.T03	MTR_8g093530	66.667	96	32	0	1	96	177	272	5.65e-41	139
MsG0380016612.01.T03	MTR_7g094750	51.020	98	48	0	1	98	178	275	1.98e-29	107
MsG0380016612.01.T03	MTR_7g094750	51.020	98	48	0	1	98	178	275	5.37e-29	108
MsG0380016612.01.T03	MTR_2g022580	42.105	95	55	0	1	95	29	123	1.07e-23	87.8
MsG0380016612.01.T03	MTR_2g022560	43.617	94	53	0	1	94	184	277	3.46e-23	92.0
MsG0380016612.01.T03	MTR_1g058380	37.234	94	59	0	1	94	144	237	2.04e-18	78.6
MsG0380016612.01.T03	MTR_4g126950	39.362	94	56	1	1	94	196	288	3.71e-17	75.1
MsG0380016612.01.T03	MTR_7g109550	40.426	94	54	2	1	94	224	315	5.37e-16	72.0
MsG0380016612.01.T03	MTR_4g121560	34.409	93	61	0	2	94	203	295	3.47e-13	63.9
MsG0380016612.01.T03	MTR_5g059400	34.021	97	63	1	1	97	262	357	5.14e-13	63.5
MsG0380016612.01.T03	MTR_1g116130	34.021	97	63	1	1	97	262	357	5.14e-13	63.5
MsG0380016612.01.T03	MTR_5g033800	32.979	94	61	1	1	94	232	323	2.66e-12	61.2
MsG0380016612.01.T03	MTR_5g033800	32.979	94	61	1	1	94	232	323	3.28e-12	61.2
MsG0380016612.01.T03	MTR_8g069790	34.737	95	58	2	1	94	265	356	4.87e-12	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016612.01.T01	AT1G48880	65.464	194	67	0	4	197	127	320	4.85e-94	281
MsG0380016612.01.T01	AT5G19160	46.667	195	104	0	4	198	111	305	8.46e-66	206
MsG0380016612.01.T01	AT3G06080	48.205	195	101	0	4	198	115	309	1.84e-65	205
MsG0380016612.01.T01	AT5G19160	46.667	195	104	0	4	198	111	305	1.12e-64	207
MsG0380016612.01.T01	AT3G06080	48.205	195	101	0	4	198	115	309	1.44e-64	206
MsG0380016612.01.T01	AT5G06230	47.368	190	100	0	7	196	83	272	1.35e-61	194
MsG0380016612.01.T01	AT5G06230	47.368	190	100	0	7	196	42	231	4.89e-61	195
MsG0380016612.01.T01	AT5G06230	47.368	190	100	0	7	196	83	272	1.28e-60	195
MsG0380016612.01.T01	AT3G11570	46.597	191	102	0	8	198	98	288	2.78e-60	194
MsG0380016612.01.T01	AT3G62390	41.919	198	113	2	1	198	147	342	1.14e-54	179
MsG0380016612.01.T01	AT3G62390	41.919	198	113	2	1	198	147	342	3.91e-54	179
MsG0380016612.01.T01	AT1G60790	43.077	195	110	1	4	198	204	397	5.46e-51	172
MsG0380016612.01.T01	AT5G49340	43.655	197	108	3	4	198	112	307	4.43e-50	169
MsG0380016612.01.T01	AT5G20590	38.462	195	119	1	4	198	154	347	2.52e-48	162
MsG0380016612.01.T01	AT5G20590	38.462	195	119	1	4	198	154	347	1.81e-47	162
MsG0380016612.01.T01	AT3G12060	37.949	195	120	1	4	198	208	401	2.68e-44	155
MsG0380016612.01.T01	AT5G06700	38.462	195	119	1	4	198	267	460	2.04e-43	153
MsG0380016612.01.T01	AT2G34070	39.196	199	107	3	1	198	74	259	2.71e-42	146
MsG0380016612.01.T01	AT1G29050	39.594	197	104	4	1	196	70	252	2.18e-39	139
MsG0380016612.01.T01	AT5G58600	36.957	184	100	5	4	185	78	247	8.42e-39	135
MsG0380016612.01.T01	AT5G58600	36.957	184	100	5	4	185	78	247	4.04e-38	136
MsG0380016612.01.T01	AT2G30900	43.353	173	82	6	1	171	52	210	7.25e-38	132
MsG0380016612.01.T01	AT2G30900	43.353	173	82	6	1	171	52	210	4.04e-37	132
MsG0380016612.01.T01	AT2G30010	39.181	171	88	4	4	171	68	225	1.84e-36	131
MsG0380016612.01.T01	AT2G42570	37.245	196	109	3	1	196	56	237	2.87e-36	130
MsG0380016612.01.T01	AT2G30010	39.181	171	88	4	4	171	111	268	3.35e-36	131
MsG0380016612.01.T01	AT3G54260	36.364	198	113	4	1	198	60	244	4.30e-36	130
MsG0380016612.01.T01	AT3G14850	36.598	194	109	4	4	197	46	225	7.53e-36	129
MsG0380016612.01.T01	AT2G31110	37.634	186	102	4	1	186	54	225	1.55e-35	126
MsG0380016612.01.T01	AT2G31110	37.634	186	102	4	1	186	54	225	1.17e-34	126
MsG0380016612.01.T01	AT1G78710	37.629	194	106	4	4	197	51	229	1.96e-34	125
MsG0380016612.01.T01	AT2G38320	37.576	165	98	2	4	168	72	231	2.52e-34	126
MsG0380016612.01.T01	AT2G40160	35.714	168	100	3	4	170	90	250	7.24e-34	123
MsG0380016612.01.T01	AT1G73140	38.554	166	93	2	4	168	80	237	4.11e-33	123
MsG0380016612.01.T01	AT2G40160	35.714	168	100	3	4	170	90	250	4.58e-33	123
MsG0380016612.01.T01	AT2G40150	35.503	169	100	2	4	171	84	244	6.25e-33	122
MsG0380016612.01.T01	AT1G78710	38.690	168	88	4	4	171	44	196	7.26e-33	120
MsG0380016612.01.T01	AT2G40160	35.714	168	100	3	4	170	90	250	7.78e-33	122
MsG0380016612.01.T01	AT5G01360	32.727	165	100	4	6	168	51	206	3.13e-31	117
MsG0380016612.01.T01	AT5G01360	32.727	165	100	4	6	168	107	262	7.22e-31	117
MsG0380016612.01.T01	AT3G55990	34.911	169	101	2	4	171	153	313	2.64e-30	116
MsG0380016612.01.T01	AT5G01620	33.533	167	104	1	2	168	122	281	9.70e-30	114
MsG0380016612.01.T01	AT5G01620	33.533	167	104	1	2	168	122	281	9.70e-30	114
MsG0380016612.01.T01	AT5G01620	33.533	167	104	1	2	168	130	289	1.22e-29	114
MsG0380016612.01.T01	AT2G38320	37.415	147	87	2	22	168	7	148	1.29e-29	112
MsG0380016612.01.T01	AT5G51640	40.351	171	89	7	6	174	152	311	5.72e-29	112
MsG0380016612.01.T01	AT1G70230	36.022	186	96	6	6	186	93	260	1.91e-28	110
MsG0380016612.01.T01	AT2G40320	33.735	166	101	3	4	168	94	251	6.13e-28	109
MsG0380016612.01.T01	AT3G11030	33.537	164	100	2	6	168	121	276	7.22e-28	109
MsG0380016612.01.T01	AT4G25360	36.364	176	99	5	1	174	184	348	1.67e-27	108
MsG0380016612.01.T01	AT4G25360	36.364	176	99	5	1	174	184	348	1.67e-27	108
MsG0380016612.01.T01	AT1G01430	31.977	172	108	4	4	174	111	274	4.78e-25	101
MsG0380016612.01.T01	AT5G15890	35.294	170	99	4	6	174	201	360	9.75e-24	98.6
MsG0380016612.01.T01	AT5G64470	36.158	177	94	6	6	173	71	237	7.37e-23	94.0
MsG0380016612.01.T01	AT5G64470	36.158	177	94	6	6	173	71	237	8.67e-23	94.0
MsG0380016612.01.T01	AT5G64470	36.158	177	94	6	6	173	71	237	1.41e-22	94.4
MsG0380016612.01.T01	AT5G64470	36.158	177	94	6	6	173	71	237	1.78e-22	94.0
MsG0380016612.01.T01	AT4G11090	33.889	180	93	7	6	174	93	257	7.49e-22	92.4
MsG0380016612.01.T01	AT4G01080	32.370	173	98	5	6	174	105	262	4.61e-21	90.5
MsG0380016612.01.T01	AT3G02440	33.333	174	103	5	6	175	141	305	2.85e-20	88.2
MsG0380016612.01.T01	AT3G02440	33.333	174	103	5	6	175	149	313	2.85e-20	88.6
MsG0380016612.01.T01	AT2G14530	33.708	178	96	7	10	175	81	248	1.34e-19	86.3
MsG0380016612.01.T01	AT4G23790	33.523	176	99	6	6	174	93	257	2.41e-19	85.5
MsG0380016612.01.T01	AT5G15900	32.948	173	105	6	6	174	81	246	3.15e-19	85.1
MsG0380016612.01.T01	AT5G15900	32.948	173	105	6	6	174	100	265	3.99e-19	85.1
MsG0380016612.01.T01	AT5G64020	28.877	187	125	4	6	185	71	256	1.34e-18	83.2
MsG0380016612.01.T01	AT2G34070	36.232	138	74	3	62	198	1	125	2.20e-18	80.9
MsG0380016612.01.T01	AT2G37720	28.342	187	126	4	6	185	157	342	2.82e-18	82.8
MsG0380016612.01.T01	AT3G28150	31.429	175	107	5	7	177	85	250	4.49e-18	82.0
MsG0380016612.01.T01	AT5G20680	26.562	192	117	6	6	182	132	314	1.15e-15	75.1
MsG0380016612.01.T01	AT5G20680	26.562	192	117	6	6	182	208	390	1.20e-15	75.1
MsG0380016612.01.T01	AT5G20680	26.562	192	117	6	6	182	226	408	1.27e-15	75.1
MsG0380016612.01.T01	AT5G20680	26.562	192	117	6	6	182	226	408	1.27e-15	75.1
MsG0380016612.01.T01	AT5G20680	26.562	192	117	6	6	182	226	408	1.27e-15	75.1
MsG0380016612.01.T01	AT5G20680	26.562	192	117	6	6	182	226	408	1.27e-15	75.1
MsG0380016612.01.T01	AT3G14850	32.353	136	78	3	62	197	1	122	2.15e-14	70.1
MsG0380016612.01.T02	AT1G48880	64.286	182	61	1	1	182	121	298	2.49e-85	258
MsG0380016612.01.T02	AT5G19160	47.753	178	89	1	2	179	106	279	2.03e-60	191
MsG0380016612.01.T02	AT5G19160	47.753	178	89	1	2	179	106	279	2.60e-59	192
MsG0380016612.01.T02	AT3G06080	48.315	178	88	1	2	179	110	283	6.32e-59	187
MsG0380016612.01.T02	AT3G06080	48.315	178	88	1	2	179	110	283	4.17e-58	189
MsG0380016612.01.T02	AT5G06230	50.000	166	83	0	14	179	83	248	7.72e-58	184
MsG0380016612.01.T02	AT5G06230	50.000	166	83	0	14	179	42	207	2.19e-57	184
MsG0380016612.01.T02	AT5G06230	50.000	166	83	0	14	179	83	248	5.81e-57	184
MsG0380016612.01.T02	AT3G11570	48.503	167	86	0	15	181	98	264	1.11e-55	181
MsG0380016612.01.T02	AT3G62390	44.767	172	93	2	8	179	147	316	1.18e-51	171
MsG0380016612.01.T02	AT3G62390	44.767	172	93	2	8	179	147	316	4.09e-51	171
MsG0380016612.01.T02	AT1G60790	45.810	179	94	2	1	179	196	371	1.21e-50	171
MsG0380016612.01.T02	AT5G20590	41.899	179	100	2	1	179	147	321	2.78e-49	164
MsG0380016612.01.T02	AT5G49340	46.196	184	92	4	1	182	106	284	5.29e-49	165
MsG0380016612.01.T02	AT5G20590	41.899	179	100	2	1	179	147	321	2.95e-48	163
MsG0380016612.01.T02	AT5G06700	41.011	178	100	2	2	179	262	434	1.09e-42	150
MsG0380016612.01.T02	AT3G12060	39.888	178	102	2	2	179	203	375	2.62e-42	149
MsG0380016612.01.T02	AT5G58600	36.313	179	96	4	1	178	72	233	3.74e-40	138
MsG0380016612.01.T02	AT2G34070	39.306	173	92	2	8	180	74	233	1.64e-39	138
MsG0380016612.01.T02	AT5G58600	36.313	179	96	4	1	178	72	233	2.41e-39	138
MsG0380016612.01.T02	AT2G30900	42.778	180	83	7	1	178	49	210	1.42e-38	133
MsG0380016612.01.T02	AT1G29050	39.412	170	90	2	8	177	70	226	3.37e-38	135
MsG0380016612.01.T02	AT2G30900	42.778	180	83	7	1	178	49	210	9.67e-38	133
MsG0380016612.01.T02	AT2G30010	38.333	180	91	5	2	178	63	225	2.15e-37	133
MsG0380016612.01.T02	AT2G30010	38.333	180	91	5	2	178	106	268	3.25e-37	133
MsG0380016612.01.T02	AT3G14850	39.205	176	89	5	2	177	41	198	9.63e-37	130
MsG0380016612.01.T02	AT2G42570	38.953	172	91	3	8	179	56	213	2.37e-36	130
MsG0380016612.01.T02	AT3G54260	39.306	173	92	4	7	179	59	218	5.75e-36	129
MsG0380016612.01.T02	AT2G31110	38.953	172	91	4	8	179	54	211	9.35e-36	126
MsG0380016612.01.T02	AT1G78710	38.983	177	90	5	2	178	38	196	8.62e-35	124
MsG0380016612.01.T02	AT2G31110	38.953	172	91	4	8	179	54	211	9.73e-35	125
MsG0380016612.01.T02	AT2G38320	36.782	174	102	3	2	175	66	231	2.22e-34	125
MsG0380016612.01.T02	AT2G40160	35.028	177	104	4	2	177	84	250	2.40e-34	123
MsG0380016612.01.T02	AT1G78710	38.983	177	90	5	2	178	45	203	4.36e-34	124
MsG0380016612.01.T02	AT1G73140	37.714	175	97	3	2	175	74	237	1.29e-33	123
MsG0380016612.01.T02	AT2G40160	35.028	177	104	4	2	177	84	250	1.83e-33	123
MsG0380016612.01.T02	AT2G40160	35.028	177	104	4	2	177	84	250	2.58e-33	123
MsG0380016612.01.T02	AT2G40150	34.831	178	104	3	2	178	78	244	2.82e-33	122
MsG0380016612.01.T02	AT5G01360	32.727	165	100	4	13	175	51	206	2.64e-31	117
MsG0380016612.01.T02	AT5G01360	31.818	176	106	5	2	175	99	262	5.87e-31	116
MsG0380016612.01.T02	AT3G55990	34.270	178	105	3	2	178	147	313	6.66e-31	117
MsG0380016612.01.T02	AT5G01620	33.333	174	107	2	2	175	117	281	3.23e-30	115
MsG0380016612.01.T02	AT5G01620	33.333	174	107	2	2	175	117	281	3.23e-30	115
MsG0380016612.01.T02	AT5G01620	33.333	174	107	2	2	175	125	289	3.35e-30	115
MsG0380016612.01.T02	AT2G38320	37.415	147	87	2	29	175	7	148	1.03e-29	111
MsG0380016612.01.T02	AT5G51640	39.773	176	93	7	8	181	147	311	2.12e-29	113
MsG0380016612.01.T02	AT2G40320	33.143	175	105	4	2	175	88	251	7.46e-29	110
MsG0380016612.01.T02	AT3G11030	32.955	176	106	3	1	175	112	276	1.30e-28	110
MsG0380016612.01.T02	AT1G70230	34.946	186	99	6	1	181	85	253	2.89e-28	109
MsG0380016612.01.T02	AT4G25360	36.364	176	99	5	8	181	184	348	9.52e-28	108
MsG0380016612.01.T02	AT4G25360	36.364	176	99	5	8	181	184	348	9.52e-28	108
MsG0380016612.01.T02	AT1G01430	31.319	182	112	5	1	181	105	274	3.18e-25	101
MsG0380016612.01.T02	AT5G15890	35.294	170	99	4	13	181	201	360	7.45e-24	97.8
MsG0380016612.01.T02	AT5G64470	36.158	177	94	6	13	180	71	237	4.61e-23	94.0
MsG0380016612.01.T02	AT5G64470	36.158	177	94	6	13	180	71	237	4.72e-23	94.0
MsG0380016612.01.T02	AT5G64470	36.158	177	94	6	13	180	71	237	8.72e-23	94.4
MsG0380016612.01.T02	AT5G64470	36.158	177	94	6	13	180	71	237	9.89e-23	94.0
MsG0380016612.01.T02	AT4G11090	33.889	180	93	7	13	181	93	257	4.48e-22	92.4
MsG0380016612.01.T02	AT4G01080	32.065	184	102	6	2	181	98	262	4.41e-21	89.7
MsG0380016612.01.T02	AT3G02440	33.333	174	103	5	13	182	149	313	1.19e-20	88.6
MsG0380016612.01.T02	AT3G02440	33.333	174	103	5	13	182	141	305	1.21e-20	88.6
MsG0380016612.01.T02	AT2G14530	33.846	195	102	9	1	182	68	248	8.09e-20	85.9
MsG0380016612.01.T02	AT4G23790	33.523	176	99	6	13	181	93	257	1.19e-19	85.5
MsG0380016612.01.T02	AT5G15900	32.948	173	105	6	13	181	81	246	3.82e-19	84.3
MsG0380016612.01.T02	AT5G15900	32.948	173	105	6	13	181	100	265	4.12e-19	84.3
MsG0380016612.01.T02	AT3G28150	31.667	180	106	6	2	177	77	243	3.35e-18	81.6
MsG0380016612.01.T02	AT5G64020	29.032	186	120	5	2	180	64	244	3.36e-18	81.3
MsG0380016612.01.T02	AT2G37720	28.495	186	121	5	2	180	150	330	6.42e-18	80.9
MsG0380016612.01.T02	AT2G34070	35.714	112	59	2	69	180	1	99	7.71e-16	73.2
MsG0380016612.01.T02	AT5G20680	29.101	189	116	9	2	180	219	399	3.73e-15	73.2
MsG0380016612.01.T02	AT5G20680	29.101	189	116	9	2	180	219	399	3.73e-15	73.2
MsG0380016612.01.T02	AT5G20680	29.101	189	116	9	2	180	219	399	3.73e-15	73.2
MsG0380016612.01.T02	AT5G20680	29.101	189	116	9	2	180	219	399	3.73e-15	73.2
MsG0380016612.01.T02	AT5G20680	26.776	183	110	6	13	180	132	305	4.16e-15	72.8
MsG0380016612.01.T02	AT5G20680	29.775	178	111	8	13	180	208	381	4.39e-15	72.8
MsG0380016612.01.T02	AT3G14850	35.780	109	56	3	69	177	1	95	6.69e-14	68.2
MsG0380016612.01.T03	AT1G48880	63.918	97	35	0	1	97	202	298	2.33e-39	135
MsG0380016612.01.T03	AT5G06230	46.809	94	50	0	1	94	155	248	1.30e-24	94.7
MsG0380016612.01.T03	AT5G06230	46.809	94	50	0	1	94	114	207	1.84e-24	95.1
MsG0380016612.01.T03	AT5G06230	46.809	94	50	0	1	94	155	248	2.69e-24	95.1
MsG0380016612.01.T03	AT3G11570	43.750	96	54	0	1	96	169	264	5.27e-23	91.7
MsG0380016612.01.T03	AT3G06080	42.553	94	54	0	1	94	190	283	1.77e-22	89.4
MsG0380016612.01.T03	AT3G06080	42.553	94	54	0	1	94	190	283	1.98e-22	90.1
MsG0380016612.01.T03	AT5G19160	39.362	94	57	0	1	94	186	279	3.59e-22	88.6
MsG0380016612.01.T03	AT5G19160	39.362	94	57	0	1	94	186	279	5.70e-22	89.0
MsG0380016612.01.T03	AT5G20590	36.170	94	59	1	1	94	229	321	1.73e-15	70.5
MsG0380016612.01.T03	AT5G20590	36.170	94	59	1	1	94	229	321	2.15e-15	70.5
MsG0380016612.01.T03	AT3G62390	36.170	94	58	2	1	94	225	316	2.04e-14	67.4
MsG0380016612.01.T03	AT3G62390	36.170	94	58	2	1	94	225	316	2.18e-14	67.4
MsG0380016612.01.T03	AT1G60790	38.298	94	57	1	1	94	279	371	2.24e-14	67.4
MsG0380016612.01.T03	AT5G49340	37.755	98	58	3	2	97	188	284	3.40e-12	61.2

Find 42 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATAAGATCACCAAACAAATT+AGG	0.268500	3:-85723508	MsG0380016612.01.T01:CDS
CTAGGAATATCACAGTTCTT+AGG	0.278013	3:+85723680	None:intergenic
GATGTTCTTATATTCAATTC+AGG	0.293943	3:-85723323	MsG0380016612.01.T01:CDS
ACCAAACAAATTAGGTTTCT+AGG	0.294028	3:-85723500	MsG0380016612.01.T01:CDS
AAGATAGAGGTTATACAAAA+TGG	0.305284	3:-85723712	MsG0380016612.01.T01:CDS
ACCTAGAAACCTAATTTGTT+TGG	0.335765	3:+85723499	None:intergenic
CTTTGCTCACCTGGGCATCT+TGG	0.341521	3:-85722555	MsG0380016612.01.T01:CDS
TTCAAACAGCTTTGCTCACC+TGG	0.344164	3:-85722564	MsG0380016612.01.T01:CDS
TGTTTGATGAAGTTGGATTC+AGG	0.353020	3:-85723825	None:intergenic
CATTGAGAAGCATCATATAA+AGG	0.356973	3:+85723779	None:intergenic
TTAAAACCTCTTTCTGCAAA+TGG	0.366665	3:+85723755	None:intergenic
TTTGCTCACCTGGGCATCTT+GGG	0.367494	3:-85722554	MsG0380016612.01.T01:CDS
CAATGTCCATTTGCAGAAAG+AGG	0.381573	3:-85723761	MsG0380016612.01.T01:CDS
CTAAGAACTGTGATATTCCT+AGG	0.417542	3:-85723679	MsG0380016612.01.T01:CDS
CATCTGAATCAACCCATTCA+TGG	0.430046	3:+85723342	None:intergenic
GGTGAAGACAACACTGAGAT+TGG	0.431850	3:-85723384	MsG0380016612.01.T01:CDS
TTATATTCAATTCAGGTCAC+TGG	0.436002	3:-85723316	MsG0380016612.01.T01:CDS
TGCCTAGATTTGCGCCGAAA+AGG	0.436178	3:-85723406	MsG0380016612.01.T01:CDS
ATTGAGAAGCATCATATAAA+GGG	0.448483	3:+85723780	None:intergenic
GCGAATGGGCGTAAAGATAG+AGG	0.453818	3:-85723725	MsG0380016612.01.T01:CDS
TTGGTAGCTCACTGAAGCTT+GGG	0.454702	3:-85722605	MsG0380016612.01.T01:CDS
TAGATGATATTAGCCATGAA+TGG	0.454788	3:-85723355	MsG0380016612.01.T01:CDS
TGTTTGAAAGCTGAATTAAT+CGG	0.459362	3:+85722579	None:intergenic
GCCTAGATTTGCGCCGAAAA+GGG	0.475483	3:-85723405	MsG0380016612.01.T01:CDS
ATTCATTGAGTAGGACTCAA+TGG	0.477060	3:-85723598	MsG0380016612.01.T01:CDS
GTTGGTAGCTCACTGAAGCT+TGG	0.495835	3:-85722606	MsG0380016612.01.T01:CDS
GCAAATCTAGGCACCGAACC+AGG	0.516119	3:+85723416	None:intergenic
AGATGATATTAGCCATGAAT+GGG	0.516712	3:-85723354	MsG0380016612.01.T01:CDS
TTGTTGGTGATTCATTGAGT+AGG	0.521972	3:-85723607	MsG0380016612.01.T01:CDS
TTCATTGAGTAGGACTCAAT+GGG	0.525301	3:-85723597	MsG0380016612.01.T01:CDS
ATTCAGGTCACTGGTGGACC+AGG	0.530375	3:-85723307	MsG0380016612.01.T01:CDS
GAGGTTATACAAAATGGAGA+TGG	0.534592	3:-85723706	MsG0380016612.01.T01:CDS
TATTCAATTCAGGTCACTGG+TGG	0.549775	3:-85723313	MsG0380016612.01.T01:CDS
AAGAGTGTTTATGAAATCAA+AGG	0.567848	3:-85723533	MsG0380016612.01.T01:CDS
TCAAACAGCTTTGCTCACCT+GGG	0.571797	3:-85722563	MsG0380016612.01.T01:CDS
ATTATCTACCCAAGATGCCC+AGG	0.580934	3:+85722546	None:intergenic
TTGATATGTATGTTAATGAC+AGG	0.583676	3:-85723569	MsG0380016612.01.T01:CDS
AAATTAGGTTTCTAGGTGTG+AGG	0.589767	3:-85723493	MsG0380016612.01.T01:CDS
AGAATACTCGAAAATCTTCG+TGG	0.596909	3:-85723644	MsG0380016612.01.T01:CDS
GAATACTCGAAAATCTTCGT+GGG	0.608334	3:-85723643	MsG0380016612.01.T01:CDS
AAATCTTCGTGGGAAAAGAG+TGG	0.610197	3:-85723633	MsG0380016612.01.T01:CDS
ATTCTACGTGCATCAAACCT+AGG	0.613739	3:+85723662	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATGATAGATATACATTTTTA+TGG	-	Chr3:85723155-85723174	MsG0380016612.01.T01:intron	15.0%
!!!	ATTTTATCTAAAGAATTACA+GGG	+	Chr3:85723446-85723465	None:intergenic	15.0%
!!	TGAAATTTATGAATTGTAAG+AGG	-	Chr3:85723324-85723343	MsG0380016612.01.T01:CDS	20.0%
!!!	ATCATGCATATGATAATTTT+GGG	-	Chr3:85723416-85723435	MsG0380016612.01.T01:CDS	20.0%
!!!	CATTTTATCTAAAGAATTAC+AGG	+	Chr3:85723447-85723466	None:intergenic	20.0%
!!!	TTAATTTTCATATTTGGATC+CGG	-	Chr3:85723250-85723269	MsG0380016612.01.T01:intron	20.0%
!!!	TTGGACTTAATTTTCATATT+TGG	-	Chr3:85723244-85723263	MsG0380016612.01.T01:intron	20.0%
!!!	TTTTGTTTACATGCTTTTTT+TGG	-	Chr3:85723225-85723244	MsG0380016612.01.T01:intron	20.0%
!	AAGATAGAGGTTATACAAAA+TGG	-	Chr3:85722654-85722673	MsG0380016612.01.T01:intron	25.0%
!	AATTTATGAATTGTAAGAGG+TGG	-	Chr3:85723327-85723346	MsG0380016612.01.T01:CDS	25.0%
!	ATAAGATCACCAAACAAATT+AGG	-	Chr3:85722858-85722877	MsG0380016612.01.T01:intron	25.0%
!	GATGTTCTTATATTCAATTC+AGG	-	Chr3:85723043-85723062	MsG0380016612.01.T01:intron	25.0%
!	TCAAATAGTGTCATGAAAAT+TGG	-	Chr3:85723558-85723577	MsG0380016612.01.T01:CDS	25.0%
!	TGTTTGAAAGCTGAATTAAT+CGG	+	Chr3:85723790-85723809	None:intergenic	25.0%
!	TTGATATGTATGTTAATGAC+AGG	-	Chr3:85722797-85722816	MsG0380016612.01.T01:intron	25.0%
!!	CATCATGCATATGATAATTT+TGG	-	Chr3:85723415-85723434	MsG0380016612.01.T01:CDS	25.0%
!!	TAATTTTCATATTTGGATCC+GGG	-	Chr3:85723251-85723270	MsG0380016612.01.T01:intron	25.0%
!!!	AAAATTTTTGTTTATGCGTG+TGG	-	Chr3:85723626-85723645	MsG0380016612.01.T01:CDS	25.0%
!!!	AAGAGTGTTTATGAAATCAA+AGG	-	Chr3:85722833-85722852	MsG0380016612.01.T01:intron	25.0%
!!!	ATTGAGAAGCATCATATAAA+GGG	+	Chr3:85722589-85722608	None:intergenic	25.0%
!!!	GTTTTAATTGTTTTGCGAAT+GGG	-	Chr3:85722627-85722646	MsG0380016612.01.T01:intron	25.0%
	AATATTAATCCTAACCTGCA+TGG	+	Chr3:85723670-85723689	None:intergenic	30.0%
	ACCAAACAAATTAGGTTTCT+AGG	-	Chr3:85722866-85722885	MsG0380016612.01.T01:intron	30.0%
	AGATGATATTAGCCATGAAT+GGG	-	Chr3:85723012-85723031	MsG0380016612.01.T01:intron	30.0%
	TAGATGATATTAGCCATGAA+TGG	-	Chr3:85723011-85723030	MsG0380016612.01.T01:intron	30.0%
	TTAAAACCTCTTTCTGCAAA+TGG	+	Chr3:85722614-85722633	None:intergenic	30.0%
	TTATATTCAATTCAGGTCAC+TGG	-	Chr3:85723050-85723069	MsG0380016612.01.T01:intron	30.0%
!	CTTTTAATAGAATTCCATGC+AGG	-	Chr3:85723653-85723672	MsG0380016612.01.T01:CDS	30.0%
!!	ACCTAGAAACCTAATTTGTT+TGG	+	Chr3:85722870-85722889	None:intergenic	30.0%
!!	CATTGAGAAGCATCATATAA+AGG	+	Chr3:85722590-85722609	None:intergenic	30.0%
!!!	GGTTTTAATTGTTTTGCGAA+TGG	-	Chr3:85722626-85722645	MsG0380016612.01.T01:intron	30.0%
	AATAGAATTCCATGCAGGTT+AGG	-	Chr3:85723658-85723677	MsG0380016612.01.T01:CDS	35.0%
	AGAATACTCGAAAATCTTCG+TGG	-	Chr3:85722722-85722741	MsG0380016612.01.T01:intron	35.0%
	ATTCATTGAGTAGGACTCAA+TGG	-	Chr3:85722768-85722787	MsG0380016612.01.T01:intron	35.0%
	CATATCAAAAAGCTTAGTCC+TGG	+	Chr3:85723080-85723099	None:intergenic	35.0%
	CTAACATGATTATCAGACAG+GGG	-	Chr3:85723724-85723743	MsG0380016612.01.T01:CDS	35.0%
	CTAAGAACTGTGATATTCCT+AGG	-	Chr3:85722687-85722706	MsG0380016612.01.T01:intron	35.0%
	CTAGGAATATCACAGTTCTT+AGG	+	Chr3:85722689-85722708	None:intergenic	35.0%
	GAATACTCGAAAATCTTCGT+GGG	-	Chr3:85722723-85722742	MsG0380016612.01.T01:intron	35.0%
	GAGGTTATACAAAATGGAGA+TGG	-	Chr3:85722660-85722679	MsG0380016612.01.T01:intron	35.0%
	GCTAACATGATTATCAGACA+GGG	-	Chr3:85723723-85723742	MsG0380016612.01.T01:CDS	35.0%
	TGCTAACATGATTATCAGAC+AGG	-	Chr3:85723722-85723741	MsG0380016612.01.T01:CDS	35.0%
	TTCATTGAGTAGGACTCAAT+GGG	-	Chr3:85722769-85722788	MsG0380016612.01.T01:intron	35.0%
!	AAATTAGGTTTCTAGGTGTG+AGG	-	Chr3:85722873-85722892	MsG0380016612.01.T01:intron	35.0%
!	CATGAAAATTGGTCTCTTAG+TGG	-	Chr3:85723569-85723588	MsG0380016612.01.T01:CDS	35.0%
!!	TTGTTGGTGATTCATTGAGT+AGG	-	Chr3:85722759-85722778	MsG0380016612.01.T01:intron	35.0%
	AAATCTTCGTGGGAAAAGAG+TGG	-	Chr3:85722733-85722752	MsG0380016612.01.T01:intron	40.0%
	ACAGTAAAGCATGCATTACC+CGG	+	Chr3:85723272-85723291	None:intergenic	40.0%
	ATTCTACGTGCATCAAACCT+AGG	+	Chr3:85722707-85722726	None:intergenic	40.0%
	CAATGTCCATTTGCAGAAAG+AGG	-	Chr3:85722605-85722624	MsG0380016612.01.T01:CDS	40.0%
	CATCTGAATCAACCCATTCA+TGG	+	Chr3:85723027-85723046	None:intergenic	40.0%
	TATTCAATTCAGGTCACTGG+TGG	-	Chr3:85723053-85723072	MsG0380016612.01.T01:intron	40.0%
!	AGTGTTGTCTTCACCCTTTT+CGG	+	Chr3:85722977-85722996	None:intergenic	40.0%
!	GGGAAAAGAGTGGTTTTTGT+TGG	-	Chr3:85722743-85722762	MsG0380016612.01.T01:intron	40.0%
	GGTGAAGACAACACTGAGAT+TGG	-	Chr3:85722982-85723001	MsG0380016612.01.T01:intron	45.0%
	TCAAACAGCTTTGCTCACCT+GGG	-	Chr3:85723803-85723822	MsG0380016612.01.T02:CDS	45.0%
	TTCAAACAGCTTTGCTCACC+TGG	-	Chr3:85723802-85723821	MsG0380016612.01.T02:CDS	45.0%
!	TTGGTAGCTCACTGAAGCTT+GGG	-	Chr3:85723761-85723780	MsG0380016612.01.T01:CDS	45.0%
!	TTTTCTCGTGAAGCCTGGTT+CGG	-	Chr3:85722937-85722956	MsG0380016612.01.T01:intron	45.0%
!!	TCTGTTTTTCTCGTGAAGCC+TGG	-	Chr3:85722932-85722951	MsG0380016612.01.T01:intron	45.0%
	CATGATTATCAGACAGGGGC+TGG	-	Chr3:85723728-85723747	MsG0380016612.01.T01:CDS	50.0%
	GCCTAGATTTGCGCCGAAAA+GGG	-	Chr3:85722961-85722980	MsG0380016612.01.T01:intron	50.0%
	GCGAATGGGCGTAAAGATAG+AGG	-	Chr3:85722641-85722660	MsG0380016612.01.T01:intron	50.0%
	TGCCTAGATTTGCGCCGAAA+AGG	-	Chr3:85722960-85722979	MsG0380016612.01.T01:intron	50.0%
	TTTGCTCACCTGGGCATCTT+GGG	-	Chr3:85723812-85723831	MsG0380016612.01.T02:CDS	50.0%
!	ACCCTTTTCGGCGCAAATCT+AGG	+	Chr3:85722965-85722984	None:intergenic	50.0%
!!	AGACAGGGGCTGGTATTTTC+AGG	-	Chr3:85723738-85723757	MsG0380016612.01.T01:CDS	50.0%
!!	GTTGGTAGCTCACTGAAGCT+TGG	-	Chr3:85723760-85723779	MsG0380016612.01.T01:CDS	50.0%
!!!	AGGGGCTGGTATTTTCAGGT+TGG	-	Chr3:85723742-85723761	MsG0380016612.01.T01:CDS	50.0%
	CTTTGCTCACCTGGGCATCT+TGG	-	Chr3:85723811-85723830	MsG0380016612.01.T02:CDS	55.0%
!	ATTCAGGTCACTGGTGGACC+AGG	-	Chr3:85723059-85723078	MsG0380016612.01.T01:intron	55.0%
!!	GCAAATCTAGGCACCGAACC+AGG	+	Chr3:85722953-85722972	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	85722551	85723837	85722551	ID=MsG0380016612.01;Name=MsG0380016612.01
Chr3	mRNA	85722551	85723816	85722551	ID=MsG0380016612.01.T01;Parent=MsG0380016612.01;Name=MsG0380016612.01.T01;_AED=0.50;_eAED=0.52;_QI=0\|0\|0\|1\|0\|0\|2\|0\|206
Chr3	exon	85722551	85722644	85722551	ID=MsG0380016612.01.T01:exon:25144;Parent=MsG0380016612.01.T01
Chr3	exon	85723290	85723816	85723290	ID=MsG0380016612.01.T01:exon:25143;Parent=MsG0380016612.01.T01
Chr3	CDS	85723290	85723816	85723290	ID=MsG0380016612.01.T01:cds;Parent=MsG0380016612.01.T01
Chr3	CDS	85722551	85722644	85722551	ID=MsG0380016612.01.T01:cds;Parent=MsG0380016612.01.T01
Chr3	mRNA	85723286	85723837	85723286	ID=MsG0380016612.01.T02;Parent=MsG0380016612.01;Name=MsG0380016612.01.T02;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|183
Chr3	exon	85723286	85723837	85723286	ID=MsG0380016612.01.T02:exon:25145;Parent=MsG0380016612.01.T02
Chr3	CDS	85723286	85723837	85723286	ID=MsG0380016612.01.T02:cds;Parent=MsG0380016612.01.T02
Chr3	mRNA	85723286	85723582	85723286	ID=MsG0380016612.01.T03;Parent=MsG0380016612.01;Name=MsG0380016612.01.T03;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|98
Chr3	exon	85723286	85723582	85723286	ID=MsG0380016612.01.T03:exon:25146;Parent=MsG0380016612.01.T03
Chr3	CDS	85723286	85723582	85723286	ID=MsG0380016612.01.T03:cds;Parent=MsG0380016612.01.T03

Gene Sequence

>MsG0380016612.01.T01

TATAGTTATAGTTACCCTTTATATGATGCTTCTCAATGTCCATTTGCAGAAAGAGGTTTTAATTGTTTTGCGAATGGGCGTAAAGATAGAGGTTATACAAAATGGAGATGGAAACCTAAGAACTGTGATATTCCTAGGTTTGATGCACGTAGAATACTCGAAAATCTTCGTGGGAAAAGAGTGGTTTTTGTTGGTGATTCATTGAGTAGGACTCAATGGGAGTCTTTGATATGTATGTTAATGACAGGTGTTGAGAATAAGAAGAGTGTTTATGAAATCAAAGGCAATAAGATCACCAAACAAATTAGGTTTCTAGGTGTGAGGTTTAGTTCTTTTGATGTTAGAATTGATTTTTATCGTTCTGTTTTTCTCGTGAAGCCTGGTTCGGTGCCTAGATTTGCGCCGAAAAGGGTGAAGACAACACTGAGATTGGACAAGATAGATGATATTAGCCATGAATGGGTTGATTCAGATGTTCTTATATTCAATTCAGGTCACTGGTGGACCAGGACTAAGCTTTTTGATATGGGCTGGTATTTTCAGGTTGGTAGCTCACTGAAGCTTGGGATGCCGATTAATTCAGCTTTCAAACAGCTTTGCTCACCTGGGCATCTTGGGTAG

>MsG0380016612.01.T02

AGTTGGATTCAGGATGATAGTTATAGTTATAGTTACCCTTTATATGATGCTTCTCAATGTCCATTTGCAGAAAGAGGTTTTAATTGTTTTGCGAATGGGCGTAAAGATAGAGGTTATACAAAATGGAGATGGAAACCTAAGAACTGTGATATTCCTAGGTTTGATGCACGTAGAATACTCGAAAATCTTCGTGGGAAAAGAGTGGTTTTTGTTGGTGATTCATTGAGTAGGACTCAATGGGAGTCTTTGATATGTATGTTAATGACAGGTGTTGAGAATAAGAAGAGTGTTTATGAAATCAAAGGCAATAAGATCACCAAACAAATTAGGTTTCTAGGTGTGAGGTTTAGTTCTTTTGATGTTAGAATTGATTTTTATCGTTCTGTTTTTCTCGTGAAGCCTGGTTCGGTGCCTAGATTTGCGCCGAAAAGGGTGAAGACAACACTGAGATTGGACAAGATAGATGATATTAGCCATGAATGGGTTGATTCAGATGTTCTTATATTCAATTCAGGTCACTGGTGGACCAGGACTAAGCTTTTTGATATGTGA

>MsG0380016612.01.T03

ATGTTAATGACAGGTGTTGAGAATAAGAAGAGTGTTTATGAAATCAAAGGCAATAAGATCACCAAACAAATTAGGTTTCTAGGTGTGAGGTTTAGTTCTTTTGATGTTAGAATTGATTTTTATCGTTCTGTTTTTCTCGTGAAGCCTGGTTCGGTGCCTAGATTTGCGCCGAAAAGGGTGAAGACAACACTGAGATTGGACAAGATAGATGATATTAGCCATGAATGGGTTGATTCAGATGTTCTTATATTCAATTCAGGTCACTGGTGGACCAGGACTAAGCTTTTTGATATGTGA

Protein sequence

>MsG0380016612.01.T01

YSYSYPLYDASQCPFAERGFNCFANGRKDRGYTKWRWKPKNCDIPRFDARRILENLRGKRVVFVGDSLSRTQWESLICMLMTGVENKKSVYEIKGNKITKQIRFLGVRFSSFDVRIDFYRSVFLVKPGSVPRFAPKRVKTTLRLDKIDDISHEWVDSDVLIFNSGHWWTRTKLFDMGWYFQVGSSLKLGMPINSAFKQLCSPGHLG*

>MsG0380016612.01.T02

SWIQDDSYSYSYPLYDASQCPFAERGFNCFANGRKDRGYTKWRWKPKNCDIPRFDARRILENLRGKRVVFVGDSLSRTQWESLICMLMTGVENKKSVYEIKGNKITKQIRFLGVRFSSFDVRIDFYRSVFLVKPGSVPRFAPKRVKTTLRLDKIDDISHEWVDSDVLIFNSGHWWTRTKLFDM*

>MsG0380016612.01.T03

MLMTGVENKKSVYEIKGNKITKQIRFLGVRFSSFDVRIDFYRSVFLVKPGSVPRFAPKRVKTTLRLDKIDDISHEWVDSDVLIFNSGHWWTRTKLFDM*