Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018438.01.T01 | XP_013454718.1 | 89.82 | 334 | 15 | 1 | 1 | 334 | 1 | 315 | 0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018438.01.T01 | Q945B6 | 50.301 | 332 | 135 | 5 | 8 | 333 | 13 | 320 | 3.96E-117 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018438.01.T01 | A0A072UG76 | 89.820 | 334 | 15 | 1 | 1 | 334 | 1 | 315 | 0.0 | 618 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048134.01 | MsG0480018438.01 | 0.841116 | 5.775179e-58 | 8.400268e-55 |
| MsG0180003320.01 | MsG0480018438.01 | 0.835475 | 1.642603e-56 | 2.010798e-53 |
| MsG0180004232.01 | MsG0480018438.01 | 0.807493 | 4.919924e-50 | 2.744329e-47 |
| MsG0180004359.01 | MsG0480018438.01 | 0.817647 | 2.959165e-52 | 2.167335e-49 |
| MsG0380012900.01 | MsG0480018438.01 | 0.803241 | 3.829626e-49 | 1.914730e-46 |
| MsG0380016299.01 | MsG0480018438.01 | 0.802662 | 5.044040e-49 | 2.484896e-46 |
| MsG0380017901.01 | MsG0480018438.01 | 0.836040 | 1.181099e-56 | 1.470682e-53 |
| MsG0480018438.01 | MsG0480018559.01 | 0.826747 | 2.288708e-54 | 2.165358e-51 |
| MsG0480018438.01 | MsG0480019024.01 | 0.814139 | 1.794161e-51 | 1.194150e-48 |
| MsG0480018438.01 | MsG0480019146.01 | 0.802714 | 4.920827e-49 | 2.427537e-46 |
| MsG0480018438.01 | MsG0480020904.01 | 0.827236 | 1.748568e-54 | 1.678207e-51 |
| MsG0480018438.01 | MsG0480021129.01 | 0.800022 | 1.751267e-48 | 8.068618e-46 |
| MsG0480018438.01 | MsG0580024207.01 | 0.801572 | 8.450477e-49 | 4.049288e-46 |
| MsG0480018438.01 | MsG0580025023.01 | 0.824069 | 9.856454e-54 | 8.639105e-51 |
| MsG0480018438.01 | MsG0580026311.01 | 0.803316 | 3.694604e-49 | 1.850769e-46 |
| MsG0480018438.01 | MsG0580026521.01 | 0.824035 | 1.003998e-53 | 8.791019e-51 |
| MsG0480018438.01 | MsG0680031200.01 | 0.820216 | 7.711799e-53 | 6.064461e-50 |
| MsG0480018438.01 | MsG0680032932.01 | 0.802734 | 4.874503e-49 | 2.405943e-46 |
| MsG0480018438.01 | MsG0680034254.01 | 0.822271 | 2.589340e-53 | 2.157043e-50 |
| MsG0480018438.01 | MsG0680034356.01 | 0.802640 | 5.098120e-49 | 2.510126e-46 |
| MsG0480018438.01 | MsG0780035930.01 | 0.810946 | 8.952251e-51 | 5.470544e-48 |
| MsG0480018438.01 | MsG0780038313.01 | 0.800619 | 1.323926e-48 | 6.192890e-46 |
| MsG0480018438.01 | MsG0780038519.01 | 0.810752 | 9.858774e-51 | 5.992941e-48 |
| MsG0480018438.01 | MsG0780038657.01 | 0.809432 | 1.897405e-50 | 1.113870e-47 |
| MsG0480018438.01 | MsG0780039916.01 | 0.806608 | 7.572859e-50 | 4.128148e-47 |
| MsG0480018438.01 | MsG0780040497.01 | 0.804549 | 2.047617e-49 | 1.058763e-46 |
| MsG0480018438.01 | MsG0780040498.01 | 0.805996 | 1.019078e-49 | 5.469584e-47 |
| MsG0480018438.01 | MsG0780040784.01 | 0.802229 | 6.195688e-49 | 3.018768e-46 |
| MsG0480018438.01 | MsG0880045854.01 | 0.805940 | 1.047131e-49 | 5.611986e-47 |
| MsG0480018438.01 | MsG0880046932.01 | 0.803163 | 3.973620e-49 | 1.982837e-46 |
| MsG0480018438.01 | MsG0880047450.01 | 0.808882 | 2.488858e-50 | 1.439679e-47 |
| MsG0280006546.01 | MsG0480018438.01 | 0.800959 | 1.128566e-48 | 5.325048e-46 |
| MsG0280009232.01 | MsG0480018438.01 | 0.804244 | 2.370285e-49 | 1.215993e-46 |
| MsG0280009253.01 | MsG0480018438.01 | 0.827538 | 1.480511e-54 | 1.433386e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018438.01.T01 | MTR_4g011690 | 89.820 | 334 | 15 | 1 | 1 | 334 | 1 | 315 | 0.0 | 618 |
| MsG0480018438.01.T01 | MTR_4g011720 | 77.844 | 334 | 54 | 2 | 1 | 334 | 1 | 314 | 0.0 | 536 |
| MsG0480018438.01.T01 | MTR_4g011720 | 82.128 | 235 | 41 | 1 | 1 | 235 | 1 | 234 | 1.15e-140 | 399 |
| MsG0480018438.01.T01 | MTR_7g090520 | 35.207 | 338 | 193 | 7 | 1 | 334 | 1 | 316 | 8.22e-74 | 231 |
| MsG0480018438.01.T01 | MTR_3g108520 | 35.207 | 338 | 185 | 10 | 1 | 327 | 1 | 315 | 8.32e-63 | 202 |
| MsG0480018438.01.T01 | MTR_1g011600 | 35.032 | 314 | 169 | 9 | 1 | 302 | 1 | 291 | 3.58e-58 | 190 |
| MsG0480018438.01.T01 | MTR_4g021360 | 34.226 | 336 | 189 | 10 | 1 | 327 | 1 | 313 | 6.85e-57 | 187 |
| MsG0480018438.01.T01 | MTR_4g021380 | 31.928 | 332 | 196 | 8 | 4 | 326 | 2 | 312 | 1.39e-53 | 179 |
| MsG0480018438.01.T01 | MTR_8g030880 | 28.487 | 337 | 201 | 9 | 9 | 334 | 10 | 317 | 2.20e-33 | 125 |
| MsG0480018438.01.T01 | MTR_6g035160 | 39.490 | 157 | 73 | 4 | 164 | 318 | 29 | 165 | 6.91e-31 | 115 |
| MsG0480018438.01.T01 | MTR_5g024940 | 28.846 | 312 | 173 | 10 | 17 | 326 | 9 | 273 | 3.69e-29 | 114 |
| MsG0480018438.01.T01 | MTR_7g077670 | 27.508 | 309 | 194 | 8 | 35 | 334 | 30 | 317 | 4.81e-29 | 114 |
| MsG0480018438.01.T01 | MTR_5g027230 | 27.397 | 292 | 184 | 7 | 36 | 325 | 26 | 291 | 3.94e-28 | 111 |
| MsG0480018438.01.T01 | MTR_1g070120 | 25.697 | 323 | 204 | 7 | 9 | 324 | 38 | 331 | 4.58e-28 | 112 |
| MsG0480018438.01.T01 | MTR_1g070135 | 25.846 | 325 | 201 | 6 | 9 | 324 | 38 | 331 | 8.68e-28 | 111 |
| MsG0480018438.01.T01 | MTR_5g025090 | 25.159 | 314 | 200 | 8 | 9 | 320 | 5 | 285 | 1.84e-26 | 106 |
| MsG0480018438.01.T01 | MTR_5g025050 | 28.105 | 306 | 185 | 9 | 9 | 312 | 5 | 277 | 2.03e-26 | 106 |
| MsG0480018438.01.T01 | MTR_1g070085 | 26.888 | 331 | 204 | 9 | 9 | 331 | 37 | 337 | 2.55e-24 | 101 |
| MsG0480018438.01.T01 | MTR_1g070085 | 26.888 | 331 | 204 | 9 | 9 | 331 | 37 | 337 | 2.55e-24 | 101 |
| MsG0480018438.01.T01 | MTR_8g024120 | 25.994 | 327 | 192 | 9 | 5 | 317 | 38 | 328 | 1.68e-23 | 99.4 |
| MsG0480018438.01.T01 | MTR_3g117420 | 28.173 | 323 | 197 | 12 | 9 | 323 | 52 | 347 | 2.97e-23 | 99.0 |
| MsG0480018438.01.T01 | MTR_3g096500 | 26.059 | 307 | 183 | 8 | 8 | 298 | 65 | 343 | 5.26e-23 | 98.6 |
| MsG0480018438.01.T01 | MTR_2g437380 | 28.793 | 323 | 195 | 10 | 9 | 322 | 50 | 346 | 6.62e-23 | 98.2 |
| MsG0480018438.01.T01 | MTR_1g034140 | 24.719 | 356 | 197 | 12 | 1 | 324 | 10 | 326 | 2.71e-22 | 96.3 |
| MsG0480018438.01.T01 | MTR_3g092890 | 24.695 | 328 | 201 | 7 | 9 | 325 | 38 | 330 | 8.63e-22 | 94.7 |
| MsG0480018438.01.T01 | MTR_4g087090 | 27.451 | 306 | 188 | 8 | 9 | 301 | 30 | 314 | 1.25e-21 | 94.4 |
| MsG0480018438.01.T01 | MTR_8g074050 | 26.254 | 339 | 211 | 10 | 1 | 328 | 44 | 354 | 1.51e-21 | 94.4 |
| MsG0480018438.01.T01 | MTR_5g032880 | 26.361 | 349 | 180 | 13 | 9 | 331 | 38 | 335 | 1.64e-21 | 95.9 |
| MsG0480018438.01.T01 | MTR_5g032880 | 28.746 | 327 | 193 | 12 | 9 | 323 | 376 | 674 | 6.10e-21 | 94.4 |
| MsG0480018438.01.T01 | MTR_1g070080 | 25.387 | 323 | 205 | 6 | 9 | 324 | 38 | 331 | 5.08e-21 | 92.4 |
| MsG0480018438.01.T01 | MTR_7g062580 | 26.462 | 325 | 207 | 9 | 4 | 323 | 50 | 347 | 7.29e-21 | 92.4 |
| MsG0480018438.01.T01 | MTR_1g034120 | 26.380 | 326 | 189 | 9 | 10 | 313 | 33 | 329 | 8.27e-21 | 92.0 |
| MsG0480018438.01.T01 | MTR_5g005570 | 26.282 | 312 | 185 | 11 | 8 | 312 | 36 | 309 | 1.48e-20 | 91.3 |
| MsG0480018438.01.T01 | MTR_1g070100 | 26.941 | 219 | 137 | 6 | 114 | 331 | 59 | 255 | 3.34e-20 | 89.0 |
| MsG0480018438.01.T01 | MTR_0009s0050 | 26.911 | 327 | 205 | 11 | 2 | 322 | 40 | 338 | 3.76e-20 | 90.1 |
| MsG0480018438.01.T01 | MTR_1g034060 | 26.380 | 326 | 189 | 10 | 10 | 313 | 33 | 329 | 3.99e-20 | 90.1 |
| MsG0480018438.01.T01 | MTR_0009s0050 | 26.994 | 326 | 204 | 11 | 3 | 322 | 41 | 338 | 4.08e-20 | 90.1 |
| MsG0480018438.01.T01 | MTR_1g070085 | 27.397 | 219 | 136 | 6 | 114 | 331 | 63 | 259 | 4.45e-20 | 88.6 |
| MsG0480018438.01.T01 | MTR_7g062600 | 26.380 | 326 | 201 | 10 | 4 | 320 | 46 | 341 | 7.60e-20 | 89.4 |
| MsG0480018438.01.T01 | MTR_6g015950 | 26.623 | 308 | 191 | 10 | 32 | 330 | 55 | 336 | 9.41e-20 | 89.0 |
| MsG0480018438.01.T01 | MTR_7g451860 | 26.897 | 290 | 178 | 8 | 8 | 291 | 40 | 301 | 1.14e-19 | 88.6 |
| MsG0480018438.01.T01 | MTR_7g047670 | 26.897 | 290 | 178 | 8 | 8 | 291 | 40 | 301 | 1.14e-19 | 88.6 |
| MsG0480018438.01.T01 | MTR_8g093930 | 26.316 | 304 | 183 | 12 | 33 | 323 | 70 | 345 | 1.27e-19 | 89.0 |
| MsG0480018438.01.T01 | MTR_8g074070 | 27.893 | 337 | 208 | 13 | 1 | 328 | 44 | 354 | 1.63e-19 | 88.6 |
| MsG0480018438.01.T01 | MTR_5g032870 | 27.385 | 325 | 200 | 9 | 9 | 323 | 38 | 336 | 1.94e-19 | 88.2 |
| MsG0480018438.01.T01 | MTR_4g087110 | 27.687 | 307 | 174 | 7 | 28 | 313 | 48 | 327 | 2.53e-19 | 87.8 |
| MsG0480018438.01.T01 | MTR_7g102820 | 25.439 | 342 | 199 | 10 | 8 | 326 | 66 | 374 | 2.80e-19 | 88.2 |
| MsG0480018438.01.T01 | MTR_4g015790 | 28.135 | 327 | 188 | 11 | 9 | 319 | 62 | 357 | 2.95e-19 | 87.8 |
| MsG0480018438.01.T01 | MTR_1g011580 | 23.944 | 284 | 183 | 5 | 9 | 289 | 63 | 316 | 3.87e-19 | 87.4 |
| MsG0480018438.01.T01 | MTR_8g033380 | 26.045 | 311 | 194 | 9 | 31 | 327 | 75 | 363 | 5.01e-19 | 87.4 |
| MsG0480018438.01.T01 | MTR_7g068650 | 28.438 | 320 | 182 | 11 | 9 | 312 | 54 | 342 | 5.56e-19 | 87.0 |
| MsG0480018438.01.T01 | MTR_3g063180 | 24.928 | 349 | 209 | 12 | 1 | 328 | 34 | 350 | 8.14e-19 | 86.7 |
| MsG0480018438.01.T01 | MTR_8g064200 | 27.077 | 325 | 204 | 10 | 2 | 320 | 50 | 347 | 9.65e-19 | 86.3 |
| MsG0480018438.01.T01 | MTR_8g064200 | 27.077 | 325 | 204 | 10 | 2 | 320 | 45 | 342 | 1.03e-18 | 86.3 |
| MsG0480018438.01.T01 | MTR_7g062570 | 26.899 | 316 | 191 | 10 | 8 | 314 | 54 | 338 | 1.71e-18 | 85.5 |
| MsG0480018438.01.T01 | MTR_4g100600 | 25.231 | 325 | 206 | 11 | 1 | 313 | 1 | 300 | 1.85e-18 | 85.1 |
| MsG0480018438.01.T01 | MTR_1g081840 | 25.000 | 304 | 192 | 10 | 8 | 299 | 52 | 331 | 2.04e-18 | 85.5 |
| MsG0480018438.01.T01 | MTR_1g070110 | 28.502 | 207 | 98 | 4 | 115 | 321 | 67 | 223 | 3.49e-18 | 82.8 |
| MsG0480018438.01.T01 | MTR_5g025060 | 25.974 | 308 | 164 | 12 | 9 | 312 | 6 | 253 | 4.59e-18 | 83.2 |
| MsG0480018438.01.T01 | MTR_0009s0050 | 29.048 | 210 | 124 | 6 | 116 | 322 | 53 | 240 | 4.67e-18 | 82.8 |
| MsG0480018438.01.T01 | MTR_7g016090 | 26.812 | 276 | 161 | 9 | 32 | 295 | 57 | 303 | 4.72e-18 | 84.0 |
| MsG0480018438.01.T01 | MTR_7g081710 | 24.771 | 327 | 207 | 10 | 9 | 326 | 49 | 345 | 4.80e-18 | 84.3 |
| MsG0480018438.01.T01 | MTR_7g016090 | 26.909 | 275 | 160 | 9 | 33 | 295 | 56 | 301 | 5.00e-18 | 84.0 |
| MsG0480018438.01.T01 | MTR_4g116010 | 25.680 | 331 | 189 | 11 | 9 | 322 | 50 | 340 | 5.29e-18 | 84.0 |
| MsG0480018438.01.T01 | MTR_3g070860 | 25.882 | 340 | 196 | 11 | 9 | 333 | 50 | 348 | 5.30e-18 | 84.3 |
| MsG0480018438.01.T01 | MTR_5g055680 | 26.300 | 327 | 207 | 11 | 2 | 322 | 40 | 338 | 6.21e-18 | 84.0 |
| MsG0480018438.01.T01 | MTR_0009s0050 | 29.048 | 210 | 124 | 6 | 116 | 322 | 53 | 240 | 6.86e-18 | 82.4 |
| MsG0480018438.01.T01 | MTR_2g437380 | 29.368 | 269 | 156 | 9 | 63 | 322 | 9 | 252 | 7.38e-18 | 82.4 |
| MsG0480018438.01.T01 | MTR_8g093980 | 25.231 | 325 | 208 | 8 | 8 | 323 | 58 | 356 | 9.21e-18 | 83.6 |
| MsG0480018438.01.T01 | MTR_5g048570 | 26.380 | 326 | 206 | 11 | 3 | 322 | 39 | 336 | 1.41e-17 | 82.8 |
| MsG0480018438.01.T01 | MTR_5g048470 | 26.769 | 325 | 205 | 11 | 2 | 320 | 46 | 343 | 2.67e-17 | 82.0 |
| MsG0480018438.01.T01 | MTR_1g070135 | 27.826 | 230 | 145 | 5 | 9 | 229 | 38 | 255 | 2.80e-17 | 81.3 |
| MsG0480018438.01.T01 | MTR_4g100590 | 25.309 | 324 | 202 | 12 | 1 | 313 | 1 | 295 | 3.05e-17 | 81.3 |
| MsG0480018438.01.T01 | MTR_4g087100 | 23.780 | 328 | 210 | 9 | 3 | 313 | 23 | 327 | 4.70e-17 | 81.3 |
| MsG0480018438.01.T01 | MTR_5g048550 | 26.074 | 326 | 207 | 11 | 1 | 320 | 39 | 336 | 9.22e-17 | 80.5 |
| MsG0480018438.01.T01 | MTR_7g062550 | 26.730 | 318 | 197 | 10 | 4 | 314 | 55 | 343 | 9.68e-17 | 80.5 |
| MsG0480018438.01.T01 | MTR_1g062110 | 25.731 | 342 | 192 | 11 | 8 | 326 | 65 | 367 | 1.39e-16 | 80.1 |
| MsG0480018438.01.T01 | MTR_7g063730 | 25.284 | 352 | 194 | 14 | 8 | 334 | 63 | 370 | 1.46e-16 | 80.1 |
| MsG0480018438.01.T01 | MTR_5g059130 | 24.359 | 312 | 187 | 12 | 8 | 305 | 43 | 319 | 2.04e-16 | 79.3 |
| MsG0480018438.01.T01 | MTR_2g083030 | 24.688 | 320 | 191 | 9 | 3 | 312 | 31 | 310 | 2.88e-16 | 79.0 |
| MsG0480018438.01.T01 | MTR_5g055900 | 25.610 | 328 | 208 | 11 | 2 | 322 | 40 | 338 | 2.96e-16 | 79.0 |
| MsG0480018438.01.T01 | MTR_0328s0030 | 25.836 | 329 | 212 | 9 | 3 | 326 | 39 | 340 | 3.06e-16 | 79.0 |
| MsG0480018438.01.T01 | MTR_3g072820 | 25.159 | 314 | 182 | 12 | 8 | 305 | 41 | 317 | 4.55e-16 | 78.2 |
| MsG0480018438.01.T01 | MTR_4g087140 | 26.154 | 325 | 198 | 9 | 9 | 313 | 26 | 328 | 6.06e-16 | 78.2 |
| MsG0480018438.01.T01 | MTR_2g102570 | 24.522 | 314 | 197 | 8 | 9 | 313 | 52 | 334 | 6.33e-16 | 78.2 |
| MsG0480018438.01.T01 | MTR_4g087120 | 25.610 | 328 | 195 | 7 | 9 | 313 | 26 | 327 | 7.06e-16 | 77.8 |
| MsG0480018438.01.T01 | MTR_5g082750 | 26.648 | 349 | 192 | 14 | 4 | 333 | 44 | 347 | 7.15e-16 | 77.8 |
| MsG0480018438.01.T01 | MTR_1g033810 | 26.349 | 315 | 200 | 10 | 4 | 312 | 42 | 330 | 7.79e-16 | 77.8 |
| MsG0480018438.01.T01 | MTR_1g102070 | 24.921 | 317 | 197 | 10 | 33 | 332 | 82 | 374 | 9.75e-16 | 77.8 |
| MsG0480018438.01.T01 | MTR_8g074070 | 26.113 | 337 | 195 | 12 | 1 | 328 | 44 | 335 | 1.11e-15 | 77.0 |
| MsG0480018438.01.T01 | MTR_4g123020 | 25.000 | 324 | 193 | 10 | 9 | 318 | 20 | 307 | 1.25e-15 | 77.0 |
| MsG0480018438.01.T01 | MTR_2g072890 | 25.610 | 328 | 206 | 11 | 8 | 326 | 51 | 349 | 1.59e-15 | 77.0 |
| MsG0480018438.01.T01 | MTR_5g022020 | 25.478 | 314 | 201 | 10 | 8 | 314 | 38 | 325 | 1.66e-15 | 77.0 |
| MsG0480018438.01.T01 | MTR_3g040410 | 25.180 | 278 | 177 | 7 | 7 | 280 | 4 | 254 | 2.05e-15 | 76.3 |
| MsG0480018438.01.T01 | MTR_6g464620 | 24.224 | 322 | 209 | 9 | 9 | 317 | 64 | 363 | 3.20e-15 | 76.3 |
| MsG0480018438.01.T01 | MTR_8g075890 | 23.492 | 315 | 206 | 10 | 8 | 314 | 38 | 325 | 4.15e-15 | 75.9 |
| MsG0480018438.01.T01 | MTR_8g075830 | 25.086 | 291 | 187 | 8 | 31 | 314 | 59 | 325 | 4.19e-15 | 75.9 |
| MsG0480018438.01.T01 | MTR_3g088565 | 23.973 | 292 | 186 | 7 | 9 | 293 | 3 | 265 | 5.48e-15 | 74.7 |
| MsG0480018438.01.T01 | MTR_5g055800 | 27.245 | 323 | 202 | 11 | 3 | 320 | 41 | 335 | 5.98e-15 | 75.1 |
| MsG0480018438.01.T01 | MTR_3g088745 | 23.926 | 326 | 207 | 12 | 8 | 317 | 35 | 335 | 6.70e-15 | 75.1 |
| MsG0480018438.01.T01 | MTR_5g059140 | 23.934 | 305 | 189 | 10 | 9 | 301 | 42 | 315 | 7.88e-15 | 74.7 |
| MsG0480018438.01.T01 | MTR_0009s0050 | 29.944 | 177 | 101 | 5 | 148 | 322 | 3 | 158 | 8.81e-15 | 72.0 |
| MsG0480018438.01.T01 | MTR_2g033270 | 25.904 | 332 | 195 | 11 | 1 | 318 | 10 | 304 | 9.91e-15 | 74.3 |
| MsG0480018438.01.T01 | MTR_3g043900 | 26.959 | 319 | 182 | 11 | 9 | 316 | 56 | 334 | 1.11e-14 | 74.3 |
| MsG0480018438.01.T01 | MTR_2g025120 | 23.232 | 297 | 193 | 8 | 9 | 300 | 4 | 270 | 1.14e-14 | 73.9 |
| MsG0480018438.01.T01 | MTR_3g058610 | 26.014 | 296 | 182 | 10 | 29 | 314 | 57 | 325 | 1.15e-14 | 74.3 |
| MsG0480018438.01.T01 | MTR_3g026150 | 24.611 | 321 | 202 | 13 | 9 | 320 | 60 | 349 | 1.50e-14 | 73.9 |
| MsG0480018438.01.T01 | MTR_0009s0480 | 24.768 | 323 | 211 | 9 | 3 | 320 | 40 | 335 | 2.31e-14 | 73.6 |
| MsG0480018438.01.T01 | MTR_3g117485 | 25.389 | 193 | 120 | 4 | 116 | 305 | 86 | 257 | 3.20e-14 | 72.4 |
| MsG0480018438.01.T01 | MTR_8g062600 | 23.795 | 332 | 217 | 12 | 9 | 331 | 67 | 371 | 3.93e-14 | 72.8 |
| MsG0480018438.01.T01 | MTR_2g083000 | 23.793 | 290 | 184 | 9 | 8 | 291 | 32 | 290 | 4.33e-14 | 72.4 |
| MsG0480018438.01.T01 | MTR_3g045230 | 26.687 | 326 | 175 | 11 | 9 | 316 | 56 | 335 | 5.70e-14 | 72.4 |
| MsG0480018438.01.T01 | MTR_3g117485 | 25.389 | 193 | 120 | 4 | 116 | 305 | 158 | 329 | 6.40e-14 | 72.0 |
| MsG0480018438.01.T01 | MTR_0056s0160 | 27.273 | 209 | 127 | 6 | 115 | 320 | 35 | 221 | 8.82e-14 | 70.5 |
| MsG0480018438.01.T01 | MTR_3g026150 | 25.283 | 265 | 169 | 10 | 62 | 320 | 5 | 246 | 1.08e-13 | 70.5 |
| MsG0480018438.01.T01 | MTR_5g055690 | 25.301 | 332 | 199 | 14 | 3 | 320 | 41 | 337 | 1.30e-13 | 71.2 |
| MsG0480018438.01.T01 | MTR_8g102600 | 22.059 | 340 | 201 | 13 | 9 | 319 | 12 | 316 | 3.97e-13 | 69.7 |
| MsG0480018438.01.T01 | MTR_5g065010 | 24.850 | 334 | 195 | 13 | 9 | 324 | 39 | 334 | 7.63e-13 | 68.9 |
| MsG0480018438.01.T01 | MTR_3g091350 | 24.471 | 331 | 210 | 10 | 1 | 323 | 51 | 349 | 7.77e-13 | 68.9 |
| MsG0480018438.01.T01 | MTR_4g087130 | 30.000 | 200 | 118 | 3 | 115 | 312 | 146 | 325 | 1.34e-12 | 68.2 |
| MsG0480018438.01.T01 | MTR_5g055820 | 24.847 | 326 | 208 | 11 | 3 | 320 | 41 | 337 | 1.44e-12 | 68.2 |
| MsG0480018438.01.T01 | MTR_5g048740 | 25.538 | 325 | 207 | 11 | 3 | 320 | 39 | 335 | 1.49e-12 | 68.2 |
| MsG0480018438.01.T01 | MTR_2g072910 | 25.466 | 322 | 202 | 12 | 8 | 320 | 50 | 342 | 1.50e-12 | 68.2 |
| MsG0480018438.01.T01 | MTR_4g115990 | 26.540 | 211 | 131 | 5 | 115 | 322 | 130 | 319 | 1.57e-12 | 67.8 |
| MsG0480018438.01.T01 | MTR_2g068840 | 25.517 | 290 | 171 | 11 | 9 | 284 | 55 | 313 | 2.09e-12 | 67.8 |
| MsG0480018438.01.T01 | MTR_1g093110 | 23.529 | 323 | 200 | 12 | 9 | 317 | 70 | 359 | 2.68e-12 | 67.4 |
| MsG0480018438.01.T01 | MTR_6g092620 | 25.220 | 341 | 178 | 13 | 9 | 323 | 3 | 292 | 3.02e-12 | 66.6 |
| MsG0480018438.01.T01 | MTR_1g048940 | 26.699 | 206 | 128 | 6 | 115 | 318 | 151 | 335 | 7.33e-12 | 65.9 |
| MsG0480018438.01.T01 | MTR_2g019370 | 20.712 | 309 | 203 | 9 | 29 | 320 | 38 | 321 | 8.59e-12 | 65.9 |
| MsG0480018438.01.T01 | MTR_5g048850 | 24.540 | 326 | 212 | 11 | 3 | 322 | 41 | 338 | 9.14e-12 | 65.9 |
| MsG0480018438.01.T01 | MTR_8g009170 | 19.760 | 334 | 228 | 9 | 9 | 331 | 60 | 364 | 1.04e-11 | 65.5 |
| MsG0480018438.01.T01 | MTR_6g088665 | 23.615 | 343 | 194 | 15 | 9 | 319 | 21 | 327 | 1.66e-11 | 64.7 |
| MsG0480018438.01.T01 | MTR_7g102720 | 23.511 | 319 | 203 | 9 | 9 | 319 | 37 | 322 | 1.71e-11 | 64.7 |
| MsG0480018438.01.T01 | MTR_6g088665 | 23.547 | 344 | 194 | 15 | 9 | 319 | 21 | 328 | 2.14e-11 | 64.7 |
| MsG0480018438.01.T01 | MTR_8g102600 | 21.575 | 292 | 172 | 11 | 57 | 319 | 3 | 266 | 6.46e-11 | 62.4 |
| MsG0480018438.01.T01 | MTR_1g086550 | 25.478 | 157 | 94 | 4 | 176 | 329 | 197 | 333 | 7.46e-11 | 62.8 |
| MsG0480018438.01.T01 | MTR_0009s0400 | 29.870 | 154 | 83 | 6 | 170 | 320 | 1 | 132 | 9.15e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018438.01.T01 | AT1G52820 | 60.059 | 338 | 110 | 4 | 1 | 334 | 1 | 317 | 9.68e-152 | 429 |
| MsG0480018438.01.T01 | AT4G03070 | 49.550 | 333 | 137 | 5 | 8 | 333 | 13 | 321 | 4.35e-116 | 338 |
| MsG0480018438.01.T01 | AT1G52820 | 61.250 | 240 | 87 | 3 | 1 | 236 | 1 | 238 | 5.61e-105 | 308 |
| MsG0480018438.01.T01 | AT1G28030 | 44.444 | 333 | 155 | 7 | 9 | 334 | 13 | 322 | 5.75e-92 | 277 |
| MsG0480018438.01.T01 | AT1G52790 | 40.122 | 329 | 175 | 3 | 6 | 333 | 2 | 309 | 4.27e-91 | 275 |
| MsG0480018438.01.T01 | AT1G52800 | 40.606 | 330 | 173 | 4 | 6 | 334 | 7 | 314 | 8.83e-91 | 274 |
| MsG0480018438.01.T01 | AT1G52810 | 42.857 | 329 | 136 | 5 | 8 | 334 | 11 | 289 | 2.77e-87 | 264 |
| MsG0480018438.01.T01 | AT1G80320 | 34.493 | 345 | 188 | 8 | 1 | 334 | 1 | 318 | 2.13e-65 | 209 |
| MsG0480018438.01.T01 | AT1G15540 | 34.493 | 345 | 189 | 10 | 1 | 334 | 1 | 319 | 9.66e-58 | 189 |
| MsG0480018438.01.T01 | AT1G15540 | 34.493 | 345 | 189 | 10 | 1 | 334 | 1 | 319 | 9.66e-58 | 189 |
| MsG0480018438.01.T01 | AT1G15540 | 34.493 | 345 | 189 | 10 | 1 | 334 | 8 | 326 | 1.10e-57 | 189 |
| MsG0480018438.01.T01 | AT1G15540 | 34.493 | 345 | 189 | 10 | 1 | 334 | 4 | 322 | 1.13e-57 | 189 |
| MsG0480018438.01.T01 | AT4G03050 | 43.386 | 189 | 103 | 2 | 1 | 189 | 1 | 185 | 2.38e-47 | 165 |
| MsG0480018438.01.T01 | AT4G03050 | 42.038 | 157 | 70 | 3 | 179 | 334 | 271 | 407 | 7.61e-37 | 137 |
| MsG0480018438.01.T01 | AT4G03050 | 43.386 | 189 | 103 | 2 | 1 | 189 | 1 | 185 | 2.38e-47 | 165 |
| MsG0480018438.01.T01 | AT4G03050 | 42.038 | 157 | 70 | 3 | 179 | 334 | 271 | 407 | 7.61e-37 | 137 |
| MsG0480018438.01.T01 | AT4G23340 | 25.321 | 312 | 195 | 9 | 36 | 334 | 30 | 316 | 1.51e-23 | 99.4 |
| MsG0480018438.01.T01 | AT3G19010 | 25.000 | 352 | 206 | 11 | 8 | 330 | 27 | 349 | 2.00e-21 | 94.0 |
| MsG0480018438.01.T01 | AT3G19010 | 25.000 | 352 | 206 | 11 | 8 | 330 | 27 | 349 | 2.00e-21 | 94.0 |
| MsG0480018438.01.T01 | AT1G78550 | 25.000 | 320 | 210 | 9 | 6 | 320 | 50 | 344 | 1.29e-20 | 91.7 |
| MsG0480018438.01.T01 | AT1G15550 | 27.187 | 320 | 189 | 10 | 9 | 319 | 57 | 341 | 2.12e-20 | 91.3 |
| MsG0480018438.01.T01 | AT1G14130 | 27.018 | 285 | 182 | 8 | 27 | 309 | 20 | 280 | 7.40e-20 | 89.0 |
| MsG0480018438.01.T01 | AT3G21420 | 27.964 | 329 | 193 | 13 | 8 | 322 | 54 | 352 | 7.43e-20 | 89.7 |
| MsG0480018438.01.T01 | AT1G14120 | 25.574 | 305 | 196 | 7 | 3 | 306 | 2 | 276 | 1.49e-19 | 88.2 |
| MsG0480018438.01.T01 | AT1G14120 | 25.574 | 305 | 196 | 7 | 3 | 306 | 2 | 276 | 1.49e-19 | 88.2 |
| MsG0480018438.01.T01 | AT1G14120 | 25.574 | 305 | 196 | 7 | 3 | 306 | 2 | 276 | 1.49e-19 | 88.2 |
| MsG0480018438.01.T01 | AT2G36690 | 25.373 | 335 | 197 | 11 | 8 | 326 | 60 | 357 | 2.40e-19 | 88.2 |
| MsG0480018438.01.T01 | AT2G36690 | 25.373 | 335 | 197 | 11 | 8 | 326 | 60 | 357 | 2.40e-19 | 88.2 |
| MsG0480018438.01.T01 | AT1G80330 | 26.006 | 323 | 192 | 9 | 9 | 317 | 49 | 338 | 2.62e-19 | 87.8 |
| MsG0480018438.01.T01 | AT1G78550 | 26.515 | 264 | 167 | 7 | 62 | 320 | 25 | 266 | 2.94e-19 | 86.7 |
| MsG0480018438.01.T01 | AT4G25420 | 25.667 | 300 | 188 | 9 | 9 | 297 | 61 | 336 | 2.44e-18 | 85.5 |
| MsG0480018438.01.T01 | AT4G23340 | 26.484 | 219 | 128 | 7 | 128 | 334 | 1 | 198 | 4.86e-18 | 81.6 |
| MsG0480018438.01.T01 | AT5G51810 | 24.779 | 339 | 210 | 12 | 10 | 327 | 54 | 368 | 9.35e-18 | 83.6 |
| MsG0480018438.01.T01 | AT5G07200 | 30.000 | 180 | 104 | 4 | 119 | 297 | 177 | 335 | 1.11e-17 | 83.6 |
| MsG0480018438.01.T01 | AT5G20550 | 26.946 | 334 | 189 | 14 | 9 | 323 | 45 | 342 | 1.91e-17 | 82.4 |
| MsG0480018438.01.T01 | AT5G24530 | 22.531 | 324 | 202 | 8 | 9 | 318 | 38 | 326 | 2.74e-17 | 82.0 |
| MsG0480018438.01.T01 | AT5G05600 | 27.273 | 330 | 207 | 11 | 3 | 322 | 53 | 359 | 4.03e-17 | 81.6 |
| MsG0480018438.01.T01 | AT1G50960 | 26.690 | 281 | 173 | 8 | 8 | 283 | 39 | 291 | 6.97e-17 | 80.9 |
| MsG0480018438.01.T01 | AT5G20400 | 24.085 | 328 | 205 | 7 | 9 | 323 | 45 | 341 | 9.36e-17 | 80.5 |
| MsG0480018438.01.T01 | AT4G21200 | 25.524 | 286 | 183 | 8 | 8 | 291 | 41 | 298 | 1.65e-16 | 79.7 |
| MsG0480018438.01.T01 | AT4G21690 | 23.509 | 285 | 182 | 6 | 35 | 305 | 63 | 325 | 1.77e-16 | 79.7 |
| MsG0480018438.01.T01 | AT3G55970 | 24.702 | 336 | 195 | 11 | 6 | 319 | 49 | 348 | 2.14e-16 | 79.7 |
| MsG0480018438.01.T01 | AT3G51240 | 24.843 | 318 | 198 | 13 | 8 | 314 | 37 | 324 | 3.14e-16 | 79.0 |
| MsG0480018438.01.T01 | AT2G38240 | 26.959 | 319 | 195 | 13 | 3 | 312 | 42 | 331 | 1.35e-15 | 77.0 |
| MsG0480018438.01.T01 | AT2G44800 | 24.332 | 337 | 211 | 10 | 1 | 326 | 45 | 348 | 1.61e-15 | 77.0 |
| MsG0480018438.01.T01 | AT3G13610 | 27.385 | 325 | 190 | 14 | 4 | 317 | 57 | 346 | 1.94e-15 | 76.6 |
| MsG0480018438.01.T01 | AT3G19010 | 23.055 | 347 | 189 | 10 | 8 | 330 | 27 | 319 | 2.72e-15 | 75.9 |
| MsG0480018438.01.T01 | AT1G80340 | 24.923 | 325 | 202 | 8 | 9 | 325 | 50 | 340 | 5.18e-15 | 75.5 |
| MsG0480018438.01.T01 | AT3G11180 | 24.927 | 341 | 205 | 11 | 9 | 334 | 95 | 399 | 6.01e-15 | 75.5 |
| MsG0480018438.01.T01 | AT5G63600 | 22.695 | 282 | 181 | 8 | 32 | 304 | 49 | 302 | 7.48e-15 | 74.7 |
| MsG0480018438.01.T01 | AT4G16330 | 23.659 | 317 | 193 | 10 | 29 | 328 | 78 | 362 | 8.65e-15 | 74.7 |
| MsG0480018438.01.T01 | AT5G63600 | 21.382 | 304 | 196 | 8 | 9 | 304 | 33 | 301 | 1.45e-14 | 73.9 |
| MsG0480018438.01.T01 | AT4G16330 | 28.235 | 170 | 100 | 3 | 117 | 285 | 67 | 215 | 1.84e-14 | 72.8 |
| MsG0480018438.01.T01 | AT3G11180 | 25.153 | 326 | 194 | 10 | 9 | 319 | 95 | 385 | 2.74e-14 | 73.6 |
| MsG0480018438.01.T01 | AT5G63595 | 25.000 | 272 | 155 | 10 | 9 | 277 | 25 | 250 | 3.10e-14 | 72.4 |
| MsG0480018438.01.T01 | AT3G19000 | 23.171 | 328 | 201 | 7 | 8 | 313 | 31 | 329 | 3.99e-14 | 72.8 |
| MsG0480018438.01.T01 | AT3G51240 | 28.571 | 203 | 116 | 8 | 117 | 314 | 62 | 240 | 4.38e-14 | 72.0 |
| MsG0480018438.01.T01 | AT1G47990 | 24.648 | 284 | 173 | 8 | 70 | 332 | 56 | 319 | 5.69e-14 | 72.0 |
| MsG0480018438.01.T01 | AT1G30040 | 23.279 | 305 | 196 | 8 | 29 | 320 | 41 | 320 | 5.83e-14 | 72.4 |
| MsG0480018438.01.T01 | AT5G54000 | 26.647 | 334 | 191 | 12 | 8 | 323 | 45 | 342 | 6.49e-14 | 72.0 |
| MsG0480018438.01.T01 | AT3G19010 | 25.403 | 248 | 154 | 9 | 8 | 234 | 27 | 264 | 6.68e-14 | 71.6 |
| MsG0480018438.01.T01 | AT4G10500 | 24.308 | 325 | 193 | 12 | 9 | 317 | 44 | 331 | 1.57e-13 | 70.9 |
| MsG0480018438.01.T01 | AT1G77330 | 24.595 | 309 | 175 | 11 | 9 | 299 | 3 | 271 | 1.92e-13 | 70.5 |
| MsG0480018438.01.T01 | AT1G06620 | 24.773 | 331 | 211 | 11 | 2 | 319 | 47 | 352 | 4.85e-13 | 69.7 |
| MsG0480018438.01.T01 | AT1G55290 | 23.810 | 315 | 204 | 9 | 9 | 317 | 62 | 346 | 7.69e-13 | 68.9 |
| MsG0480018438.01.T01 | AT2G19590 | 26.220 | 328 | 180 | 15 | 8 | 320 | 10 | 290 | 1.32e-12 | 67.8 |
| MsG0480018438.01.T01 | AT4G22880 | 23.373 | 338 | 212 | 11 | 4 | 324 | 42 | 349 | 1.57e-12 | 68.2 |
| MsG0480018438.01.T01 | AT4G22880 | 23.373 | 338 | 212 | 11 | 4 | 324 | 42 | 349 | 1.57e-12 | 68.2 |
| MsG0480018438.01.T01 | AT4G22880 | 23.373 | 338 | 212 | 11 | 4 | 324 | 42 | 349 | 1.57e-12 | 68.2 |
| MsG0480018438.01.T01 | AT3G46500 | 22.124 | 339 | 216 | 11 | 9 | 331 | 17 | 323 | 1.60e-12 | 67.8 |
| MsG0480018438.01.T01 | AT5G54000 | 28.436 | 211 | 127 | 6 | 116 | 323 | 73 | 262 | 1.72e-12 | 67.0 |
| MsG0480018438.01.T01 | AT5G51810 | 26.210 | 248 | 161 | 10 | 10 | 240 | 54 | 296 | 2.70e-12 | 67.0 |
| MsG0480018438.01.T01 | AT1G44090 | 24.051 | 316 | 189 | 12 | 3 | 299 | 57 | 340 | 2.90e-12 | 67.4 |
| MsG0480018438.01.T01 | AT1G49390 | 23.171 | 328 | 208 | 9 | 9 | 323 | 45 | 341 | 3.50e-12 | 67.0 |
| MsG0480018438.01.T01 | AT1G49390 | 24.242 | 297 | 175 | 9 | 40 | 323 | 3 | 262 | 4.07e-12 | 66.2 |
| MsG0480018438.01.T01 | AT2G19590 | 28.095 | 210 | 116 | 7 | 118 | 320 | 94 | 275 | 6.29e-12 | 65.9 |
| MsG0480018438.01.T01 | AT5G05600 | 29.114 | 237 | 154 | 10 | 3 | 229 | 53 | 285 | 9.10e-12 | 65.5 |
| MsG0480018438.01.T01 | AT3G46500 | 22.819 | 298 | 186 | 10 | 9 | 290 | 17 | 286 | 1.26e-11 | 65.1 |
| MsG0480018438.01.T01 | AT5G59530 | 22.500 | 320 | 211 | 12 | 8 | 317 | 57 | 349 | 2.26e-11 | 64.7 |
| MsG0480018438.01.T01 | AT5G63580 | 28.571 | 224 | 135 | 9 | 9 | 220 | 19 | 229 | 2.40e-11 | 63.5 |
| MsG0480018438.01.T01 | AT5G63580 | 28.571 | 224 | 135 | 9 | 9 | 220 | 19 | 229 | 2.47e-11 | 63.5 |
| MsG0480018438.01.T01 | AT5G07480 | 26.126 | 222 | 131 | 9 | 115 | 326 | 41 | 239 | 2.70e-11 | 63.2 |
| MsG0480018438.01.T01 | AT1G12010 | 23.962 | 313 | 179 | 11 | 4 | 299 | 2 | 272 | 2.89e-11 | 63.9 |
| MsG0480018438.01.T01 | AT1G17020 | 25.820 | 244 | 167 | 7 | 8 | 243 | 52 | 289 | 3.59e-11 | 63.9 |
| MsG0480018438.01.T01 | AT5G07480 | 26.126 | 222 | 131 | 9 | 115 | 326 | 150 | 348 | 3.73e-11 | 63.9 |
| MsG0480018438.01.T01 | AT3G61400 | 23.853 | 327 | 207 | 10 | 9 | 320 | 60 | 359 | 4.60e-11 | 63.9 |
| MsG0480018438.01.T01 | AT1G30040 | 24.402 | 209 | 140 | 6 | 30 | 225 | 42 | 245 | 6.25e-11 | 62.4 |
Find 93 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATGTTGTTTGCATTTAT+TGG | 0.153073 | 4:+4891628 | MsG0480018438.01.T01:three_prime_UTR |
| CTAAACCCTCCACTTGATTT+TGG | 0.172318 | 4:-4890956 | None:intergenic |
| GCATTACCGTTAATCAAATT+AGG | 0.196491 | 4:+4890021 | MsG0480018438.01.T01:five_prime_UTR |
| CCACACAGCATATATATTTA+TGG | 0.199950 | 4:-4891574 | None:intergenic |
| GGGAAGGAAAATTGAAAATA+TGG | 0.200270 | 4:+4890042 | MsG0480018438.01.T01:exon |
| GATTATTAGGAAGATGATTT+TGG | 0.201290 | 4:+4890785 | MsG0480018438.01.T01:CDS |
| CATAACTCTGAGAAGATAAT+TGG | 0.214480 | 4:-4890853 | None:intergenic |
| TGACTTCAATAACCTCAATT+TGG | 0.231298 | 4:+4890096 | MsG0480018438.01.T01:CDS |
| AAGAGTTGGATCAGATTATT+AGG | 0.267839 | 4:+4890772 | MsG0480018438.01.T01:CDS |
| TTTATAATGTACCCTTCTTT+GGG | 0.274338 | 4:-4891383 | None:intergenic |
| AGCTACAAGCCTTCTTCTTC+AGG | 0.296513 | 4:+4891008 | MsG0480018438.01.T01:CDS |
| AGGAACACCCTTTGCTCTTT+AGG | 0.302565 | 4:+4891429 | MsG0480018438.01.T01:CDS |
| TCCTTCCCTAATTTGATTAA+CGG | 0.306158 | 4:-4890027 | None:intergenic |
| TAACTCCCAATTGGTACTTT+TGG | 0.308113 | 4:-4890122 | None:intergenic |
| AAAAGCTCCGGAGGAGCTTA+TGG | 0.311206 | 4:+4891403 | MsG0480018438.01.T01:CDS |
| AGGTTATTGAAGTCAATTAT+TGG | 0.318169 | 4:-4890088 | None:intergenic |
| TTATGACCAAAGATGGAAAA+TGG | 0.328291 | 4:+4890982 | MsG0480018438.01.T01:CDS |
| TTGCCCAACATAACCATGAT+AGG | 0.336365 | 4:-4890302 | None:intergenic |
| CATTACCGTTAATCAAATTA+GGG | 0.348558 | 4:+4890022 | MsG0480018438.01.T01:five_prime_UTR |
| ATTATTGCTAATGTGGCTTA+AGG | 0.354229 | 4:-4891151 | None:intergenic |
| CAAACAAGTGACACAAAATT+AGG | 0.359188 | 4:+4890891 | MsG0480018438.01.T01:CDS |
| AAATCAAGTGGAGGGTTTAG+AGG | 0.368484 | 4:+4890959 | MsG0480018438.01.T01:CDS |
| AAGTCAATTATTGGAAGCTT+TGG | 0.372595 | 4:-4890079 | None:intergenic |
| CATCAAATACTTTGATATCT+CGG | 0.378250 | 4:-4891179 | None:intergenic |
| AGTGAAGTCTCAAGTCTATA+AGG | 0.380544 | 4:+4890144 | MsG0480018438.01.T01:CDS |
| CTCATCATCACCCGATGAAA+TGG | 0.386231 | 4:-4891320 | None:intergenic |
| TGGAAGCCAAAAGTACCAAT+TGG | 0.387141 | 4:+4890116 | MsG0480018438.01.T01:CDS |
| TATAAGGCATTAGTAGAGTA+TGG | 0.392107 | 4:+4890160 | MsG0480018438.01.T01:CDS |
| TTTAGGTGTTGAAAAGTACT+TGG | 0.418069 | 4:+4890812 | MsG0480018438.01.T01:CDS |
| GCTTATGGAGTATTATTAAG+AGG | 0.421439 | 4:+4891546 | MsG0480018438.01.T01:three_prime_UTR |
| GGCTGCATTCGCCATTTCAT+CGG | 0.425966 | 4:+4891309 | MsG0480018438.01.T01:CDS |
| TCCATCTGGCCACAAGTTGT+TGG | 0.443142 | 4:-4890398 | None:intergenic |
| TTAGAGGTTATGACCAAAGA+TGG | 0.443286 | 4:+4890975 | MsG0480018438.01.T01:CDS |
| ATCAAATACTTTGATATCTC+GGG | 0.450140 | 4:-4891178 | None:intergenic |
| GTGGTGTTTGAGCTAGCTTA+TGG | 0.450323 | 4:+4891531 | MsG0480018438.01.T01:exon |
| TTGAGTAGCTTAGTCTCTAA+AGG | 0.454248 | 4:-4890265 | None:intergenic |
| AATGAGGCAAGATATTCAAC+AGG | 0.456964 | 4:+4891347 | MsG0480018438.01.T01:CDS |
| GCATAGCAAATTGATCCCTT+TGG | 0.459235 | 4:-4891499 | None:intergenic |
| AGACTTCACTAACTCCCAAT+TGG | 0.461381 | 4:-4890131 | None:intergenic |
| AGGAATTCAACATGATCATA+AGG | 0.464212 | 4:-4891452 | None:intergenic |
| AAGCCCTATCATGGTTATGT+TGG | 0.469509 | 4:+4890298 | MsG0480018438.01.T01:CDS |
| GCTGCATTCGCCATTTCATC+GGG | 0.470058 | 4:+4891310 | MsG0480018438.01.T01:CDS |
| GGAAGGAAAATTGAAAATAT+GGG | 0.471478 | 4:+4890043 | MsG0480018438.01.T01:exon |
| ATGCATGTGTGACTACAATC+TGG | 0.478236 | 4:-4891209 | None:intergenic |
| GGAAGCCAAAAGTACCAATT+GGG | 0.484125 | 4:+4890117 | MsG0480018438.01.T01:CDS |
| AGCCCTATCATGGTTATGTT+GGG | 0.490019 | 4:+4890299 | MsG0480018438.01.T01:CDS |
| TGAGTAGCTTAGTCTCTAAA+GGG | 0.493999 | 4:-4890264 | None:intergenic |
| TCCTCATCCATAAGCTCCTC+CGG | 0.495941 | 4:-4891410 | None:intergenic |
| CTCTGAGGAGCTAAAAGAGT+TGG | 0.499701 | 4:+4890758 | MsG0480018438.01.T01:CDS |
| ATGTCTTTACGAAGGTCTAA+AGG | 0.510202 | 4:-4890211 | None:intergenic |
| AAGTATTATTACACTGAGAA+AGG | 0.511569 | 4:+4891476 | MsG0480018438.01.T01:CDS |
| TTGTTCTCTATCCCCAAAGA+AGG | 0.517620 | 4:+4891371 | MsG0480018438.01.T01:CDS |
| TTATGTTGGGCAATATCCTA+TGG | 0.518224 | 4:+4890312 | MsG0480018438.01.T01:CDS |
| AGGGTACATTATAAAAGCTC+CGG | 0.518778 | 4:+4891391 | MsG0480018438.01.T01:CDS |
| CATAAGGCCTAAAGAGCAAA+GGG | 0.531600 | 4:-4891436 | None:intergenic |
| GTGTCTAAGAAGCCCTATCA+TGG | 0.535288 | 4:+4890289 | MsG0480018438.01.T01:CDS |
| TTGGAATCTCATCAAAGATA+CGG | 0.537068 | 4:-4891720 | None:intergenic |
| ACAAAACTGCCTGAAGAAGA+AGG | 0.537768 | 4:-4891017 | None:intergenic |
| GGGCCACATTATTGCTAATG+TGG | 0.541143 | 4:-4891158 | None:intergenic |
| ATTAAATCAGTAATACATGT+TGG | 0.541495 | 4:-4891739 | None:intergenic |
| TCCGGAGGAGCTTATGGATG+AGG | 0.541958 | 4:+4891409 | MsG0480018438.01.T01:CDS |
| TGCAGGCATGGTCAAACGGA+AGG | 0.550290 | 4:+4891288 | MsG0480018438.01.T01:intron |
| ACCGTTAATCAAATTAGGGA+AGG | 0.553627 | 4:+4890026 | MsG0480018438.01.T01:five_prime_UTR |
| CTTATGGAGTATTATTAAGA+GGG | 0.553764 | 4:+4891547 | MsG0480018438.01.T01:three_prime_UTR |
| TATCAAAGTATTTGATGTTG+CGG | 0.554105 | 4:+4891185 | MsG0480018438.01.T01:CDS |
| ACCAACAACTTGTGGCCAGA+TGG | 0.566062 | 4:+4890397 | MsG0480018438.01.T01:CDS |
| TTTGCTATGCGCACTTATTG+TGG | 0.568726 | 4:+4891512 | MsG0480018438.01.T01:CDS |
| TGCCCAACATAACCATGATA+GGG | 0.575813 | 4:-4890301 | None:intergenic |
| TTGTACCAAAATCAAGTGGA+GGG | 0.578480 | 4:+4890951 | MsG0480018438.01.T01:CDS |
| AGGTGTTGAAAAGTACTTGG+AGG | 0.581664 | 4:+4890815 | MsG0480018438.01.T01:CDS |
| TCTCAGTGTAATAATACTTG+AGG | 0.583007 | 4:-4891472 | None:intergenic |
| TTTCATCGGGTGATGATGAG+TGG | 0.585763 | 4:+4891323 | MsG0480018438.01.T01:CDS |
| ATGGAGTATTATTAAGAGGG+TGG | 0.593596 | 4:+4891550 | MsG0480018438.01.T01:three_prime_UTR |
| TTACACTGAGAAAGGCCAAA+GGG | 0.595444 | 4:+4891484 | MsG0480018438.01.T01:CDS |
| TTCATCGGGTGATGATGAGT+GGG | 0.604252 | 4:+4891324 | MsG0480018438.01.T01:CDS |
| TTATAATGTACCCTTCTTTG+GGG | 0.608444 | 4:-4891382 | None:intergenic |
| TCATAAGGCCTAAAGAGCAA+AGG | 0.609201 | 4:-4891437 | None:intergenic |
| GGTGATGATGAGTGGGAATG+AGG | 0.615235 | 4:+4891331 | MsG0480018438.01.T01:CDS |
| CATATTGTACCAAAATCAAG+TGG | 0.618110 | 4:+4890947 | MsG0480018438.01.T01:CDS |
| ATTGTACCAAAATCAAGTGG+AGG | 0.620577 | 4:+4890950 | MsG0480018438.01.T01:CDS |
| AATATCTTAGAGAAAGTAGA+CGG | 0.632378 | 4:+4890370 | MsG0480018438.01.T01:CDS |
| AAGCAAATATGTCTTTACGA+AGG | 0.638765 | 4:-4890219 | None:intergenic |
| AATTATTGGAAGCTTTGGAG+TGG | 0.639485 | 4:-4890074 | None:intergenic |
| TGCATGTGTGACTACAATCT+GGG | 0.640454 | 4:-4891208 | None:intergenic |
| AACTATACATTCCTTCTCTG+AGG | 0.641007 | 4:+4890743 | MsG0480018438.01.T01:CDS |
| TCTTGTCACTATGTGTGCTG+AGG | 0.642869 | 4:-4890914 | None:intergenic |
| AAGCCACATTAGCAATAATG+TGG | 0.650801 | 4:+4891155 | MsG0480018438.01.T01:CDS |
| ATTACACTGAGAAAGGCCAA+AGG | 0.655145 | 4:+4891483 | MsG0480018438.01.T01:CDS |
| TGTTCTCTATCCCCAAAGAA+GGG | 0.657730 | 4:+4891372 | MsG0480018438.01.T01:CDS |
| GTACATTATAAAAGCTCCGG+AGG | 0.668840 | 4:+4891394 | MsG0480018438.01.T01:CDS |
| ACGGTATGACCAACAACTTG+TGG | 0.685600 | 4:+4890389 | MsG0480018438.01.T01:CDS |
| CCATAAATATATATGCTGTG+TGG | 0.764644 | 4:+4891574 | MsG0480018438.01.T01:three_prime_UTR |
| ATGAGGCAAGATATTCAACA+GGG | 0.767250 | 4:+4891348 | MsG0480018438.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAACAAAATAATAAG+GGG | - | Chr4:4890714-4890733 | None:intergenic | 10.0% |
| !! | AAACAAATTATCAATCATTA+AGG | + | Chr4:4891093-4891112 | MsG0480018438.01.T01:intron | 15.0% |
| !!! | TTGATAATTTGTTTTTGATA+AGG | - | Chr4:4891087-4891106 | None:intergenic | 15.0% |
| !! | ATTAAATCAGTAATACATGT+TGG | - | Chr4:4891742-4891761 | None:intergenic | 20.0% |
| !!! | AATTTGTTTTTGATAAGGAA+TGG | - | Chr4:4891082-4891101 | None:intergenic | 20.0% |
| !!! | TATATGTTGTTTGCATTTAT+TGG | + | Chr4:4891628-4891647 | MsG0480018438.01.T01:three_prime_UTR | 20.0% |
| !!! | TTTTTACGTACCTAAAATTT+TGG | - | Chr4:4890426-4890445 | None:intergenic | 20.0% |
| ! | AAGTATTATTACACTGAGAA+AGG | + | Chr4:4891476-4891495 | MsG0480018438.01.T01:CDS | 25.0% |
| ! | AATATCTTAGAGAAAGTAGA+CGG | + | Chr4:4890370-4890389 | MsG0480018438.01.T01:CDS | 25.0% |
| ! | AGGTTATTGAAGTCAATTAT+TGG | - | Chr4:4890091-4890110 | None:intergenic | 25.0% |
| ! | ATCAAATACTTTGATATCTC+GGG | - | Chr4:4891181-4891200 | None:intergenic | 25.0% |
| ! | CATCAAATACTTTGATATCT+CGG | - | Chr4:4891182-4891201 | None:intergenic | 25.0% |
| ! | CATTACCGTTAATCAAATTA+GGG | + | Chr4:4890022-4890041 | MsG0480018438.01.T01:five_prime_UTR | 25.0% |
| ! | GGAAGGAAAATTGAAAATAT+GGG | + | Chr4:4890043-4890062 | MsG0480018438.01.T01:exon | 25.0% |
| ! | TTTATAATGTACCCTTCTTT+GGG | - | Chr4:4891386-4891405 | None:intergenic | 25.0% |
| !! | CTTATGGAGTATTATTAAGA+GGG | + | Chr4:4891547-4891566 | MsG0480018438.01.T01:three_prime_UTR | 25.0% |
| !! | GACAATGCTCTATAATTTTA+GGG | - | Chr4:4890523-4890542 | None:intergenic | 25.0% |
| !! | GATTATTAGGAAGATGATTT+TGG | + | Chr4:4890785-4890804 | MsG0480018438.01.T01:CDS | 25.0% |
| !! | TATCAAAGTATTTGATGTTG+CGG | + | Chr4:4891185-4891204 | MsG0480018438.01.T01:CDS | 25.0% |
| !! | TGCTAAATAGTTTAAGATAC+CGG | - | Chr4:4890471-4890490 | None:intergenic | 25.0% |
| !! | TTTTATAATGTACCCTTCTT+TGG | - | Chr4:4891387-4891406 | None:intergenic | 25.0% |
| !!! | ACTTGTTTTAGTTGTTTAAC+CGG | + | Chr4:4890449-4890468 | MsG0480018438.01.T01:intron | 25.0% |
| AAGAAATATAAGTCCTCCAA+TGG | - | Chr4:4890684-4890703 | None:intergenic | 30.0% | |
| AAGAGTTGGATCAGATTATT+AGG | + | Chr4:4890772-4890791 | MsG0480018438.01.T01:CDS | 30.0% | |
| AAGCAAATATGTCTTTACGA+AGG | - | Chr4:4890222-4890241 | None:intergenic | 30.0% | |
| AAGTCAATTATTGGAAGCTT+TGG | - | Chr4:4890082-4890101 | None:intergenic | 30.0% | |
| AGGAATTCAACATGATCATA+AGG | - | Chr4:4891455-4891474 | None:intergenic | 30.0% | |
| ATTATTGCTAATGTGGCTTA+AGG | - | Chr4:4891154-4891173 | None:intergenic | 30.0% | |
| CAAACAAGTGACACAAAATT+AGG | + | Chr4:4890891-4890910 | MsG0480018438.01.T01:CDS | 30.0% | |
| CATATTGTACCAAAATCAAG+TGG | + | Chr4:4890947-4890966 | MsG0480018438.01.T01:CDS | 30.0% | |
| CCACACAGCATATATATTTA+TGG | - | Chr4:4891577-4891596 | None:intergenic | 30.0% | |
| CCATAAATATATATGCTGTG+TGG | + | Chr4:4891574-4891593 | MsG0480018438.01.T01:three_prime_UTR | 30.0% | |
| GCATTACCGTTAATCAAATT+AGG | + | Chr4:4890021-4890040 | MsG0480018438.01.T01:five_prime_UTR | 30.0% | |
| GGGAAGGAAAATTGAAAATA+TGG | + | Chr4:4890042-4890061 | MsG0480018438.01.T01:exon | 30.0% | |
| TAGAGATGCTCTAATATGAT+TGG | - | Chr4:4890606-4890625 | None:intergenic | 30.0% | |
| TCCTTCCCTAATTTGATTAA+CGG | - | Chr4:4890030-4890049 | None:intergenic | 30.0% | |
| TCTCAGTGTAATAATACTTG+AGG | - | Chr4:4891475-4891494 | None:intergenic | 30.0% | |
| TGACTTCAATAACCTCAATT+TGG | + | Chr4:4890096-4890115 | MsG0480018438.01.T01:CDS | 30.0% | |
| TTATAATGTACCCTTCTTTG+GGG | - | Chr4:4891385-4891404 | None:intergenic | 30.0% | |
| TTATGACCAAAGATGGAAAA+TGG | + | Chr4:4890982-4891001 | MsG0480018438.01.T01:CDS | 30.0% | |
| TTGGAATCTCATCAAAGATA+CGG | - | Chr4:4891723-4891742 | None:intergenic | 30.0% | |
| ! | CAGATGGAAACCAAAATTTT+AGG | + | Chr4:4890413-4890432 | MsG0480018438.01.T01:CDS | 30.0% |
| ! | CATAACTCTGAGAAGATAAT+TGG | - | Chr4:4890856-4890875 | None:intergenic | 30.0% |
| ! | CGACAATGCTCTATAATTTT+AGG | - | Chr4:4890524-4890543 | None:intergenic | 30.0% |
| ! | GCTTATGGAGTATTATTAAG+AGG | + | Chr4:4891546-4891565 | MsG0480018438.01.T01:three_prime_UTR | 30.0% |
| ! | TATAAGGCATTAGTAGAGTA+TGG | + | Chr4:4890160-4890179 | MsG0480018438.01.T01:CDS | 30.0% |
| ! | TCGTGTTATATGAATTTTGC+AGG | + | Chr4:4891271-4891290 | MsG0480018438.01.T01:intron | 30.0% |
| ! | TTATATGAATTTTGCAGGCA+TGG | + | Chr4:4891276-4891295 | MsG0480018438.01.T01:intron | 30.0% |
| !! | AAGATGATTTTGGAGAGTTT+AGG | + | Chr4:4890795-4890814 | MsG0480018438.01.T01:CDS | 30.0% |
| !! | AGGATACACTTTTTGAACTT+AGG | - | Chr4:4890649-4890668 | None:intergenic | 30.0% |
| !! | CACTTGATTTTGGTACAATA+TGG | - | Chr4:4890949-4890968 | None:intergenic | 30.0% |
| !! | TTTAGGTGTTGAAAAGTACT+TGG | + | Chr4:4890812-4890831 | MsG0480018438.01.T01:CDS | 30.0% |
| !!! | AATTTTGTGTCACTTGTTTG+AGG | - | Chr4:4890891-4890910 | None:intergenic | 30.0% |
| !!! | ATTTTGTGTCACTTGTTTGA+GGG | - | Chr4:4890890-4890909 | None:intergenic | 30.0% |
| !!! | CTAAAATTTTGGTTTCCATC+TGG | - | Chr4:4890415-4890434 | None:intergenic | 30.0% |
| AACTATACATTCCTTCTCTG+AGG | + | Chr4:4890743-4890762 | MsG0480018438.01.T01:CDS | 35.0% | |
| AAGCCACATTAGCAATAATG+TGG | + | Chr4:4891155-4891174 | MsG0480018438.01.T01:CDS | 35.0% | |
| AATGAGGCAAGATATTCAAC+AGG | + | Chr4:4891347-4891366 | MsG0480018438.01.T01:CDS | 35.0% | |
| ACCGTTAATCAAATTAGGGA+AGG | + | Chr4:4890026-4890045 | MsG0480018438.01.T01:five_prime_UTR | 35.0% | |
| AGGGTACATTATAAAAGCTC+CGG | + | Chr4:4891391-4891410 | MsG0480018438.01.T01:CDS | 35.0% | |
| AGTGAAGTCTCAAGTCTATA+AGG | + | Chr4:4890144-4890163 | MsG0480018438.01.T01:CDS | 35.0% | |
| ATGAGGCAAGATATTCAACA+GGG | + | Chr4:4891348-4891367 | MsG0480018438.01.T01:CDS | 35.0% | |
| ATGTCTTTACGAAGGTCTAA+AGG | - | Chr4:4890214-4890233 | None:intergenic | 35.0% | |
| ATTGTACCAAAATCAAGTGG+AGG | + | Chr4:4890950-4890969 | MsG0480018438.01.T01:CDS | 35.0% | |
| TGAGTAGCTTAGTCTCTAAA+GGG | - | Chr4:4890267-4890286 | None:intergenic | 35.0% | |
| TTAGAGGTTATGACCAAAGA+TGG | + | Chr4:4890975-4890994 | MsG0480018438.01.T01:CDS | 35.0% | |
| TTATGTTGGGCAATATCCTA+TGG | + | Chr4:4890312-4890331 | MsG0480018438.01.T01:CDS | 35.0% | |
| TTGAGTAGCTTAGTCTCTAA+AGG | - | Chr4:4890268-4890287 | None:intergenic | 35.0% | |
| TTGTACCAAAATCAAGTGGA+GGG | + | Chr4:4890951-4890970 | MsG0480018438.01.T01:CDS | 35.0% | |
| ! | ATGGAGTATTATTAAGAGGG+TGG | + | Chr4:4891550-4891569 | MsG0480018438.01.T01:three_prime_UTR | 35.0% |
| ! | GCTTATCCATTTTCCATCTT+TGG | - | Chr4:4890991-4891010 | None:intergenic | 35.0% |
| ! | TAACTCCCAATTGGTACTTT+TGG | - | Chr4:4890125-4890144 | None:intergenic | 35.0% |
| !! | AATTATTGGAAGCTTTGGAG+TGG | - | Chr4:4890077-4890096 | None:intergenic | 35.0% |
| !! | ATTATAGAGCATTGTCGACT+TGG | + | Chr4:4890527-4890546 | MsG0480018438.01.T01:intron | 35.0% |
| !!! | TACTTTTGGCTTCCAAATTG+AGG | - | Chr4:4890111-4890130 | None:intergenic | 35.0% |
| AAATCAAGTGGAGGGTTTAG+AGG | + | Chr4:4890959-4890978 | MsG0480018438.01.T01:CDS | 40.0% | |
| AAGCCCTATCATGGTTATGT+TGG | + | Chr4:4890298-4890317 | MsG0480018438.01.T01:CDS | 40.0% | |
| ACAAAACTGCCTGAAGAAGA+AGG | - | Chr4:4891020-4891039 | None:intergenic | 40.0% | |
| AGACTTCACTAACTCCCAAT+TGG | - | Chr4:4890134-4890153 | None:intergenic | 40.0% | |
| AGCCCTATCATGGTTATGTT+GGG | + | Chr4:4890299-4890318 | MsG0480018438.01.T01:CDS | 40.0% | |
| ATGCATGTGTGACTACAATC+TGG | - | Chr4:4891212-4891231 | None:intergenic | 40.0% | |
| ATTACACTGAGAAAGGCCAA+AGG | + | Chr4:4891483-4891502 | MsG0480018438.01.T01:CDS | 40.0% | |
| CATAAGGCCTAAAGAGCAAA+GGG | - | Chr4:4891439-4891458 | None:intergenic | 40.0% | |
| CTCTCAAAAAGTGGAACCAT+AGG | - | Chr4:4890331-4890350 | None:intergenic | 40.0% | |
| GCATAGCAAATTGATCCCTT+TGG | - | Chr4:4891502-4891521 | None:intergenic | 40.0% | |
| GTACATTATAAAAGCTCCGG+AGG | + | Chr4:4891394-4891413 | MsG0480018438.01.T01:CDS | 40.0% | |
| TCATAAGGCCTAAAGAGCAA+AGG | - | Chr4:4891440-4891459 | None:intergenic | 40.0% | |
| TCCTTAACAAGTGTCACCAT+TGG | + | Chr4:4890665-4890684 | MsG0480018438.01.T01:intron | 40.0% | |
| TGCATGTGTGACTACAATCT+GGG | - | Chr4:4891211-4891230 | None:intergenic | 40.0% | |
| TGCCCAACATAACCATGATA+GGG | - | Chr4:4890304-4890323 | None:intergenic | 40.0% | |
| TGTTCTCTATCCCCAAAGAA+GGG | + | Chr4:4891372-4891391 | MsG0480018438.01.T01:CDS | 40.0% | |
| TTAACAAGTGTCACCATTGG+AGG | + | Chr4:4890668-4890687 | MsG0480018438.01.T01:intron | 40.0% | |
| TTACACTGAGAAAGGCCAAA+GGG | + | Chr4:4891484-4891503 | MsG0480018438.01.T01:CDS | 40.0% | |
| TTGCCCAACATAACCATGAT+AGG | - | Chr4:4890305-4890324 | None:intergenic | 40.0% | |
| TTGTTCTCTATCCCCAAAGA+AGG | + | Chr4:4891371-4891390 | MsG0480018438.01.T01:CDS | 40.0% | |
| ! | ATTTTGCAGGCATGGTCAAA+CGG | + | Chr4:4891284-4891303 | MsG0480018438.01.T01:intron | 40.0% |
| ! | CTAAACCCTCCACTTGATTT+TGG | - | Chr4:4890959-4890978 | None:intergenic | 40.0% |
| ! | TCCAATGGTGACACTTGTTA+AGG | - | Chr4:4890669-4890688 | None:intergenic | 40.0% |
| ! | TTGTTGATTGCGATTGCATC+AGG | + | Chr4:4891126-4891145 | MsG0480018438.01.T01:intron | 40.0% |
| ! | TTTGCTATGCGCACTTATTG+TGG | + | Chr4:4891512-4891531 | MsG0480018438.01.T01:CDS | 40.0% |
| !! | AGGTGTTGAAAAGTACTTGG+AGG | + | Chr4:4890815-4890834 | MsG0480018438.01.T01:CDS | 40.0% |
| !! | GGAAGCCAAAAGTACCAATT+GGG | + | Chr4:4890117-4890136 | MsG0480018438.01.T01:CDS | 40.0% |
| !! | GGCAGTTTTGTAGCTATGAT+TGG | + | Chr4:4891029-4891048 | MsG0480018438.01.T01:CDS | 40.0% |
| !! | TGGAAGCCAAAAGTACCAAT+TGG | + | Chr4:4890116-4890135 | MsG0480018438.01.T01:CDS | 40.0% |
| !!! | GTTCCACTTTTTGAGAGCAT+GGG | + | Chr4:4890334-4890353 | MsG0480018438.01.T01:CDS | 40.0% |
| ACGGTATGACCAACAACTTG+TGG | + | Chr4:4890389-4890408 | MsG0480018438.01.T01:CDS | 45.0% | |
| AGCTACAAGCCTTCTTCTTC+AGG | + | Chr4:4891008-4891027 | MsG0480018438.01.T01:CDS | 45.0% | |
| AGGAACACCCTTTGCTCTTT+AGG | + | Chr4:4891429-4891448 | MsG0480018438.01.T01:CDS | 45.0% | |
| ATGCCCATGCTCTCAAAAAG+TGG | - | Chr4:4890340-4890359 | None:intergenic | 45.0% | |
| CTCATCATCACCCGATGAAA+TGG | - | Chr4:4891323-4891342 | None:intergenic | 45.0% | |
| GGGCCACATTATTGCTAATG+TGG | - | Chr4:4891161-4891180 | None:intergenic | 45.0% | |
| GTGTCTAAGAAGCCCTATCA+TGG | + | Chr4:4890289-4890308 | MsG0480018438.01.T01:CDS | 45.0% | |
| TCTTGTCACTATGTGTGCTG+AGG | - | Chr4:4890917-4890936 | None:intergenic | 45.0% | |
| ! | CTCTGAGGAGCTAAAAGAGT+TGG | + | Chr4:4890758-4890777 | MsG0480018438.01.T01:CDS | 45.0% |
| ! | GTGGTGTTTGAGCTAGCTTA+TGG | + | Chr4:4891531-4891550 | MsG0480018438.01.T01:exon | 45.0% |
| ! | TTCATCGGGTGATGATGAGT+GGG | + | Chr4:4891324-4891343 | MsG0480018438.01.T01:CDS | 45.0% |
| ! | TTTCATCGGGTGATGATGAG+TGG | + | Chr4:4891323-4891342 | MsG0480018438.01.T01:CDS | 45.0% |
| !! | TAGAGCATTGTCGACTTGGA+CGG | + | Chr4:4890531-4890550 | MsG0480018438.01.T01:intron | 45.0% |
| !!! | CTCTTTTAGCTCCTCAGAGA+AGG | - | Chr4:4890757-4890776 | None:intergenic | 45.0% |
| !!! | GGTTCCACTTTTTGAGAGCA+TGG | + | Chr4:4890333-4890352 | MsG0480018438.01.T01:CDS | 45.0% |
| !! | AAAATTAAAACAAAATAATA+AGG | - | Chr4:4890716-4890735 | None:intergenic | 5.0% |
| !! | AAATTAAAACAAAATAATAA+GGG | - | Chr4:4890715-4890734 | None:intergenic | 5.0% |
| AAAAGCTCCGGAGGAGCTTA+TGG | + | Chr4:4891403-4891422 | MsG0480018438.01.T01:CDS | 50.0% | |
| ACCAACAACTTGTGGCCAGA+TGG | + | Chr4:4890397-4890416 | MsG0480018438.01.T01:CDS | 50.0% | |
| GCTGCATTCGCCATTTCATC+GGG | + | Chr4:4891310-4891329 | MsG0480018438.01.T01:CDS | 50.0% | |
| GGCTGCATTCGCCATTTCAT+CGG | + | Chr4:4891309-4891328 | MsG0480018438.01.T01:CDS | 50.0% | |
| TCCATCTGGCCACAAGTTGT+TGG | - | Chr4:4890401-4890420 | None:intergenic | 50.0% | |
| TCCTCATCCATAAGCTCCTC+CGG | - | Chr4:4891413-4891432 | None:intergenic | 50.0% | |
| ! | GGTGATGATGAGTGGGAATG+AGG | + | Chr4:4891331-4891350 | MsG0480018438.01.T01:CDS | 50.0% |
| TCCGGAGGAGCTTATGGATG+AGG | + | Chr4:4891409-4891428 | MsG0480018438.01.T01:CDS | 55.0% | |
| TGCAGGCATGGTCAAACGGA+AGG | + | Chr4:4891288-4891307 | MsG0480018438.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 4890013 | 4891795 | 4890013 | ID=MsG0480018438.01;Name=MsG0480018438.01 |
| Chr4 | mRNA | 4890013 | 4891795 | 4890013 | ID=MsG0480018438.01.T01;Parent=MsG0480018438.01;Name=MsG0480018438.01.T01;_AED=0.49;_eAED=0.52;_QI=48|0.33|0.5|1|1|1|4|254|334 |
| Chr4 | exon | 4890013 | 4890434 | 4890013 | ID=MsG0480018438.01.T01:exon:1306;Parent=MsG0480018438.01.T01 |
| Chr4 | exon | 4890740 | 4891050 | 4890740 | ID=MsG0480018438.01.T01:exon:1307;Parent=MsG0480018438.01.T01 |
| Chr4 | exon | 4891148 | 4891218 | 4891148 | ID=MsG0480018438.01.T01:exon:1308;Parent=MsG0480018438.01.T01 |
| Chr4 | exon | 4891293 | 4891795 | 4891293 | ID=MsG0480018438.01.T01:exon:1309;Parent=MsG0480018438.01.T01 |
| Chr4 | five_prime_UTR | 4890013 | 4890060 | 4890013 | ID=MsG0480018438.01.T01:five_prime_utr;Parent=MsG0480018438.01.T01 |
| Chr4 | CDS | 4890061 | 4890434 | 4890061 | ID=MsG0480018438.01.T01:cds;Parent=MsG0480018438.01.T01 |
| Chr4 | CDS | 4890740 | 4891050 | 4890740 | ID=MsG0480018438.01.T01:cds;Parent=MsG0480018438.01.T01 |
| Chr4 | CDS | 4891148 | 4891218 | 4891148 | ID=MsG0480018438.01.T01:cds;Parent=MsG0480018438.01.T01 |
| Chr4 | CDS | 4891293 | 4891541 | 4891293 | ID=MsG0480018438.01.T01:cds;Parent=MsG0480018438.01.T01 |
| Chr4 | three_prime_UTR | 4891542 | 4891795 | 4891542 | ID=MsG0480018438.01.T01:three_prime_utr;Parent=MsG0480018438.01.T01 |
| Gene Sequence |
| Protein sequence |
