Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040543.01.T01 | XP_003625185.1 | 84.364 | 275 | 3 | 2 | 1 | 235 | 1 | 275 | 3.59E-158 | 449 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040543.01.T01 | Q9FL54 | 66.667 | 222 | 61 | 4 | 25 | 235 | 65 | 284 | 3.74E-89 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040543.01.T01 | A2Q3D3 | 84.364 | 275 | 3 | 2 | 1 | 235 | 1 | 275 | 1.71e-158 | 449 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0780040543.01 | 0.849108 | 3.994081e-60 | 7.492077e-57 |
| MsG0080048150.01 | MsG0780040543.01 | 0.841766 | 3.893313e-58 | 5.779390e-55 |
| MsG0080048311.01 | MsG0780040543.01 | 0.800205 | 1.607647e-48 | 7.441422e-46 |
| MsG0080048701.01 | MsG0780040543.01 | 0.804935 | 1.701269e-49 | 8.885543e-47 |
| MsG0080048781.01 | MsG0780040543.01 | 0.826776 | 2.252919e-54 | 2.133214e-51 |
| MsG0080048829.01 | MsG0780040543.01 | 0.805853 | 1.092174e-49 | 5.840484e-47 |
| MsG0080048842.01 | MsG0780040543.01 | -0.815620 | 8.420461e-52 | 5.835148e-49 |
| MsG0080049140.01 | MsG0780040543.01 | 0.826403 | 2.765755e-54 | 2.591227e-51 |
| MsG0180000076.01 | MsG0780040543.01 | 0.810679 | 1.022656e-50 | 6.204323e-48 |
| MsG0180000353.01 | MsG0780040543.01 | 0.829975 | 3.809733e-55 | 3.960542e-52 |
| MsG0180000360.01 | MsG0780040543.01 | 0.811767 | 5.937620e-51 | 3.707454e-48 |
| MsG0180001198.01 | MsG0780040543.01 | 0.802914 | 4.473920e-49 | 2.218333e-46 |
| MsG0180001237.01 | MsG0780040543.01 | 0.801569 | 8.465464e-49 | 4.056095e-46 |
| MsG0180001272.01 | MsG0780040543.01 | 0.806206 | 9.206952e-50 | 4.968044e-47 |
| MsG0180001294.01 | MsG0780040543.01 | 0.804396 | 2.203886e-49 | 1.135071e-46 |
| MsG0180003509.01 | MsG0780040543.01 | 0.806508 | 7.949306e-50 | 4.322430e-47 |
| MsG0180003658.01 | MsG0780040543.01 | 0.811129 | 8.170584e-51 | 5.016599e-48 |
| MsG0180003796.01 | MsG0780040543.01 | 0.818018 | 2.439642e-52 | 1.805126e-49 |
| MsG0180004027.01 | MsG0780040543.01 | 0.820485 | 6.692073e-53 | 5.301895e-50 |
| MsG0180004099.01 | MsG0780040543.01 | 0.805202 | 1.496175e-49 | 7.867702e-47 |
| MsG0180004126.01 | MsG0780040543.01 | 0.858753 | 6.633745e-63 | 1.711123e-59 |
| MsG0180004320.01 | MsG0780040543.01 | 0.808035 | 3.774246e-50 | 2.135218e-47 |
| MsG0180004754.01 | MsG0780040543.01 | 0.818398 | 2.001195e-52 | 1.496457e-49 |
| MsG0180004806.01 | MsG0780040543.01 | 0.837927 | 3.894317e-57 | 5.135312e-54 |
| MsG0180004989.01 | MsG0780040543.01 | 0.821724 | 3.467479e-53 | 2.843768e-50 |
| MsG0180005504.01 | MsG0780040543.01 | 0.807057 | 6.087775e-50 | 3.357332e-47 |
| MsG0180005835.01 | MsG0780040543.01 | 0.826373 | 2.811744e-54 | 2.632138e-51 |
| MsG0180006235.01 | MsG0780040543.01 | 0.818274 | 2.135429e-52 | 1.591130e-49 |
| MsG0780040364.01 | MsG0780040543.01 | 0.856848 | 2.437253e-62 | 5.895414e-59 |
| MsG0780040482.01 | MsG0780040543.01 | 0.810183 | 1.308586e-50 | 7.834879e-48 |
| MsG0780040541.01 | MsG0780040543.01 | 0.819656 | 1.035825e-52 | 8.019659e-50 |
| MsG0780040543.01 | MsG0780040564.01 | 0.822175 | 2.725776e-53 | 2.264308e-50 |
| MsG0780040543.01 | MsG0780040688.01 | 0.811035 | 8.560797e-51 | 5.243438e-48 |
| MsG0780040543.01 | MsG0780040897.01 | 0.819908 | 9.073379e-53 | 7.074514e-50 |
| MsG0780040543.01 | MsG0780041132.01 | 0.813245 | 2.822655e-51 | 1.833517e-48 |
| MsG0780040543.01 | MsG0780041141.01 | 0.851554 | 8.226649e-61 | 1.671409e-57 |
| MsG0780040543.01 | MsG0780041143.01 | 0.856730 | 2.640817e-62 | 6.363062e-59 |
| MsG0780040543.01 | MsG0780041423.01 | 0.812857 | 3.433035e-51 | 2.206848e-48 |
| MsG0780040543.01 | MsG0780041506.01 | 0.802081 | 6.644025e-49 | 3.225079e-46 |
| MsG0780040543.01 | MsG0780041548.01 | 0.805843 | 1.097678e-49 | 5.868159e-47 |
| MsG0780040543.01 | MsG0780041756.01 | 0.812260 | 4.636421e-51 | 2.933910e-48 |
| MsG0780040543.01 | MsG0880041860.01 | 0.821016 | 5.052415e-53 | 4.062817e-50 |
| MsG0780040543.01 | MsG0880041896.01 | 0.801089 | 1.061467e-48 | 5.025042e-46 |
| MsG0780040543.01 | MsG0880042046.01 | 0.830565 | 2.733316e-55 | 2.890441e-52 |
| MsG0780040543.01 | MsG0880042552.01 | 0.815006 | 1.152974e-51 | 7.856156e-49 |
| MsG0780040543.01 | MsG0880043431.01 | 0.820192 | 7.808403e-53 | 6.136862e-50 |
| MsG0780040543.01 | MsG0880043516.01 | 0.838493 | 2.782845e-57 | 3.733590e-54 |
| MsG0780040543.01 | MsG0880044340.01 | 0.825107 | 5.613782e-54 | 5.068978e-51 |
| MsG0780040543.01 | MsG0880044792.01 | 0.808512 | 2.986237e-50 | 1.710758e-47 |
| MsG0780040543.01 | MsG0880045552.01 | 0.853325 | 2.574955e-61 | 5.542820e-58 |
| MsG0780040543.01 | MsG0880046165.01 | 0.843172 | 1.649435e-58 | 2.558896e-55 |
| MsG0780040543.01 | MsG0880046431.01 | 0.813531 | 2.441645e-51 | 1.598607e-48 |
| MsG0780040543.01 | MsG0880046885.01 | 0.807077 | 6.027071e-50 | 3.325506e-47 |
| MsG0780040543.01 | MsG0880047012.01 | 0.812139 | 4.927139e-51 | 3.107628e-48 |
| MsG0780040543.01 | MsG0880047120.01 | 0.811578 | 6.526099e-51 | 4.054616e-48 |
| MsG0780040543.01 | MsG0880047192.01 | 0.809351 | 1.975501e-50 | 1.157247e-47 |
| MsG0780040543.01 | MsG0880047223.01 | 0.816867 | 4.432420e-52 | 3.177886e-49 |
| MsG0780040543.01 | MsG0880047226.01 | 0.878023 | 3.925440e-69 | 2.017251e-65 |
| MsG0780040543.01 | MsG0880047293.01 | 0.813072 | 3.079143e-51 | 1.990804e-48 |
| MsG0780040543.01 | MsG0880047431.01 | 0.822355 | 2.475859e-53 | 2.067516e-50 |
| MsG0780040543.01 | MsG0880047466.01 | 0.859184 | 4.929677e-63 | 1.290556e-59 |
| MsG0280010633.01 | MsG0780040543.01 | 0.822334 | 2.504831e-53 | 2.090416e-50 |
| MsG0280010794.01 | MsG0780040543.01 | 0.812342 | 4.450211e-51 | 2.822297e-48 |
| MsG0280010795.01 | MsG0780040543.01 | 0.824461 | 7.973180e-54 | 7.066390e-51 |
| MsG0280010868.01 | MsG0780040543.01 | 0.869109 | 3.959056e-66 | 1.468072e-62 |
| MsG0280011014.01 | MsG0780040543.01 | 0.800413 | 1.457987e-48 | 6.784717e-46 |
| MsG0280011154.01 | MsG0780040543.01 | 0.842061 | 3.254768e-58 | 4.876550e-55 |
| MsG0280011282.01 | MsG0780040543.01 | 0.800382 | 1.479871e-48 | 6.881026e-46 |
| MsG0380014171.01 | MsG0780040543.01 | 0.828199 | 1.026835e-54 | 1.013571e-51 |
| MsG0380014289.01 | MsG0780040543.01 | 0.823544 | 1.308438e-53 | 1.129929e-50 |
| MsG0380014754.01 | MsG0780040543.01 | 0.835257 | 1.864500e-56 | 2.267847e-53 |
| MsG0680031206.01 | MsG0780040543.01 | 0.806412 | 8.331860e-50 | 4.519213e-47 |
| MsG0680031616.01 | MsG0780040543.01 | 0.840354 | 9.148073e-58 | 1.299631e-54 |
| MsG0680034392.01 | MsG0780040543.01 | 0.846518 | 2.065606e-59 | 3.564807e-56 |
| MsG0680034598.01 | MsG0780040543.01 | 0.812247 | 4.665802e-51 | 2.951537e-48 |
| MsG0480018526.01 | MsG0780040543.01 | 0.828331 | 9.539568e-55 | 9.452162e-52 |
| MsG0480018567.01 | MsG0780040543.01 | 0.840364 | 9.090183e-58 | 1.291866e-54 |
| MsG0480018885.01 | MsG0780040543.01 | 0.824796 | 6.646413e-54 | 5.948780e-51 |
| MsG0480018918.01 | MsG0780040543.01 | 0.818035 | 2.418469e-52 | 1.790236e-49 |
| MsG0480018919.01 | MsG0780040543.01 | 0.804875 | 1.751139e-49 | 9.132213e-47 |
| MsG0480019588.01 | MsG0780040543.01 | 0.807538 | 4.812809e-50 | 2.687612e-47 |
| MsG0480019635.01 | MsG0780040543.01 | 0.841782 | 3.855125e-58 | 5.725452e-55 |
| MsG0480020263.01 | MsG0780040543.01 | 0.820336 | 7.237182e-53 | 5.710201e-50 |
| MsG0480020917.01 | MsG0780040543.01 | 0.812271 | 4.611605e-51 | 2.919094e-48 |
| MsG0480021156.01 | MsG0780040543.01 | 0.853175 | 2.842295e-61 | 6.087138e-58 |
| MsG0480021225.01 | MsG0780040543.01 | 0.832169 | 1.102213e-55 | 1.222086e-52 |
| MsG0480021914.01 | MsG0780040543.01 | 0.801654 | 8.129633e-49 | 3.903561e-46 |
| MsG0480021958.01 | MsG0780040543.01 | 0.821876 | 3.197763e-53 | 2.634022e-50 |
| MsG0480022167.01 | MsG0780040543.01 | 0.834083 | 3.680125e-56 | 4.320783e-53 |
| MsG0480022325.01 | MsG0780040543.01 | 0.831140 | 1.975774e-55 | 2.125163e-52 |
| MsG0480022394.01 | MsG0780040543.01 | 0.822834 | 1.915644e-53 | 1.621635e-50 |
| MsG0480023262.01 | MsG0780040543.01 | 0.815931 | 7.180248e-52 | 5.017541e-49 |
| MsG0480023296.01 | MsG0780040543.01 | 0.823065 | 1.692406e-53 | 1.442043e-50 |
| MsG0480023324.01 | MsG0780040543.01 | 0.813337 | 2.694389e-51 | 1.754702e-48 |
| MsG0480023450.01 | MsG0780040543.01 | 0.844349 | 7.989827e-59 | 1.286238e-55 |
| MsG0480023500.01 | MsG0780040543.01 | 0.801507 | 8.715921e-49 | 4.169676e-46 |
| MsG0480023620.01 | MsG0780040543.01 | 0.824740 | 6.851930e-54 | 6.122851e-51 |
| MsG0480023672.01 | MsG0780040543.01 | 0.836464 | 9.217834e-57 | 1.162560e-53 |
| MsG0480023737.01 | MsG0780040543.01 | 0.829998 | 3.762033e-55 | 3.913534e-52 |
| MsG0480023808.01 | MsG0780040543.01 | 0.809381 | 1.945870e-50 | 1.140806e-47 |
| MsG0580024109.01 | MsG0780040543.01 | 0.812347 | 4.438274e-51 | 2.815158e-48 |
| MsG0580024478.01 | MsG0780040543.01 | 0.851232 | 1.014797e-60 | 2.040379e-57 |
| MsG0580024489.01 | MsG0780040543.01 | 0.862335 | 5.450620e-64 | 1.590472e-60 |
| MsG0580024813.01 | MsG0780040543.01 | 0.800337 | 1.510803e-48 | 7.016931e-46 |
| MsG0580024954.01 | MsG0780040543.01 | 0.820055 | 8.395554e-53 | 6.573305e-50 |
| MsG0580025093.01 | MsG0780040543.01 | 0.850433 | 1.703051e-60 | 3.335784e-57 |
| MsG0580025352.01 | MsG0780040543.01 | 0.842198 | 2.993968e-58 | 4.504931e-55 |
| MsG0580025385.01 | MsG0780040543.01 | 0.831546 | 1.570486e-55 | 1.709870e-52 |
| MsG0580025766.01 | MsG0780040543.01 | 0.852251 | 5.218678e-61 | 1.083996e-57 |
| MsG0580026059.01 | MsG0780040543.01 | 0.809548 | 1.791674e-50 | 1.055056e-47 |
| MsG0380015234.01 | MsG0780040543.01 | 0.802250 | 6.133080e-49 | 2.989977e-46 |
| MsG0380015548.01 | MsG0780040543.01 | 0.854776 | 9.827899e-62 | 2.219641e-58 |
| MsG0380015816.01 | MsG0780040543.01 | 0.809310 | 2.016070e-50 | 1.179649e-47 |
| MsG0380016217.01 | MsG0780040543.01 | 0.815844 | 7.508240e-52 | 5.234151e-49 |
| MsG0380016703.01 | MsG0780040543.01 | 0.804140 | 2.491596e-49 | 1.274899e-46 |
| MsG0380016971.01 | MsG0780040543.01 | 0.810909 | 9.119143e-51 | 5.566649e-48 |
| MsG0380016994.01 | MsG0780040543.01 | 0.830152 | 3.449864e-55 | 3.604867e-52 |
| MsG0380017024.01 | MsG0780040543.01 | 0.812828 | 3.483638e-51 | 2.237623e-48 |
| MsG0380017049.01 | MsG0780040543.01 | 0.808845 | 2.535223e-50 | 1.465065e-47 |
| MsG0380017159.01 | MsG0780040543.01 | 0.804484 | 2.113134e-49 | 1.090796e-46 |
| MsG0380017239.01 | MsG0780040543.01 | 0.801184 | 1.014893e-48 | 4.815813e-46 |
| MsG0380017240.01 | MsG0780040543.01 | 0.847025 | 1.500780e-59 | 2.632347e-56 |
| MsG0380017330.01 | MsG0780040543.01 | 0.800046 | 1.731391e-48 | 7.982081e-46 |
| MsG0380017361.01 | MsG0780040543.01 | 0.815847 | 7.496927e-52 | 5.226673e-49 |
| MsG0380017643.01 | MsG0780040543.01 | 0.814779 | 1.295020e-51 | 8.769490e-49 |
| MsG0380017881.01 | MsG0780040543.01 | 0.818916 | 1.526859e-52 | 1.158215e-49 |
| MsG0380017997.01 | MsG0780040543.01 | 0.800235 | 1.585141e-48 | 7.342789e-46 |
| MsG0380018007.01 | MsG0780040543.01 | 0.834717 | 2.550889e-56 | 3.052075e-53 |
| MsG0480018230.01 | MsG0780040543.01 | 0.814485 | 1.504250e-51 | 1.010652e-48 |
| MsG0480018256.01 | MsG0780040543.01 | 0.830882 | 2.286493e-55 | 2.440708e-52 |
| MsG0580028060.01 | MsG0780040543.01 | 0.813481 | 2.504601e-51 | 1.637591e-48 |
| MsG0580028449.01 | MsG0780040543.01 | 0.811425 | 7.047815e-51 | 4.361221e-48 |
| MsG0580028756.01 | MsG0780040543.01 | 0.837604 | 4.712795e-57 | 6.153394e-54 |
| MsG0580029298.01 | MsG0780040543.01 | 0.811837 | 5.732019e-51 | 3.585693e-48 |
| MsG0580029591.01 | MsG0780040543.01 | 0.809290 | 2.035888e-50 | 1.190651e-47 |
| MsG0580029712.01 | MsG0780040543.01 | 0.807357 | 5.258839e-50 | 2.922897e-47 |
| MsG0680030436.01 | MsG0780040543.01 | 0.810493 | 1.121433e-50 | 6.769663e-48 |
| MsG0280006477.01 | MsG0780040543.01 | 0.839646 | 1.399081e-57 | 1.944431e-54 |
| MsG0280006540.01 | MsG0780040543.01 | 0.803995 | 2.670743e-49 | 1.361529e-46 |
| MsG0280006884.01 | MsG0780040543.01 | 0.811556 | 6.600194e-51 | 4.098298e-48 |
| MsG0280007089.01 | MsG0780040543.01 | 0.838105 | 3.503473e-57 | 4.644812e-54 |
| MsG0280007359.01 | MsG0780040543.01 | 0.807349 | 5.280215e-50 | 2.934181e-47 |
| MsG0280007419.01 | MsG0780040543.01 | 0.809000 | 2.348759e-50 | 1.362930e-47 |
| MsG0280007609.01 | MsG0780040543.01 | 0.812029 | 5.206032e-51 | 3.273513e-48 |
| MsG0280007761.01 | MsG0780040543.01 | 0.838392 | 2.955993e-57 | 3.953603e-54 |
| MsG0280007790.01 | MsG0780040543.01 | 0.827844 | 1.250045e-54 | 1.221141e-51 |
| MsG0280007876.01 | MsG0780040543.01 | 0.813109 | 3.022811e-51 | 1.956254e-48 |
| MsG0280007983.01 | MsG0780040543.01 | 0.880188 | 6.740098e-70 | 3.761527e-66 |
| MsG0280008280.01 | MsG0780040543.01 | 0.819356 | 1.212217e-52 | 9.306492e-50 |
| MsG0280008679.01 | MsG0780040543.01 | 0.857233 | 1.876066e-62 | 4.598676e-59 |
| MsG0280009241.01 | MsG0780040543.01 | 0.809114 | 2.219855e-50 | 1.292169e-47 |
| MsG0280009514.01 | MsG0780040543.01 | 0.811168 | 8.011004e-51 | 4.923567e-48 |
| MsG0280009752.01 | MsG0780040543.01 | 0.823931 | 1.061752e-53 | 9.270649e-51 |
| MsG0280010173.01 | MsG0780040543.01 | 0.852061 | 5.907730e-61 | 1.219729e-57 |
| MsG0780038837.01 | MsG0780040543.01 | 0.830066 | 3.620555e-55 | 3.773542e-52 |
| MsG0780038945.01 | MsG0780040543.01 | 0.829896 | 3.982526e-55 | 4.131136e-52 |
| MsG0780039137.01 | MsG0780040543.01 | 0.801529 | 8.624323e-49 | 4.128157e-46 |
| MsG0780039462.01 | MsG0780040543.01 | -0.814041 | 1.885685e-51 | 1.251741e-48 |
| MsG0780039533.01 | MsG0780040543.01 | 0.828533 | 8.529701e-55 | 8.501807e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040543.01.T01 | MTR_7g092380 | 84.364 | 275 | 3 | 2 | 1 | 235 | 1 | 275 | 4.35e-162 | 449 |
| MsG0780040543.01.T01 | MTR_1g052110 | 74.884 | 215 | 46 | 2 | 25 | 231 | 74 | 288 | 6.33e-106 | 308 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040543.01.T01 | AT3G12170 | 70.732 | 205 | 52 | 2 | 25 | 221 | 47 | 251 | 1.52e-100 | 293 |
| MsG0780040543.01.T01 | AT3G12170 | 70.732 | 205 | 52 | 2 | 25 | 221 | 83 | 287 | 1.11e-99 | 292 |
| MsG0780040543.01.T01 | AT5G06910 | 66.667 | 222 | 61 | 4 | 25 | 235 | 65 | 284 | 3.81e-90 | 267 |
Find 47 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTGCCTTCCTCTTTAA+AGG | 0.137096 | 7:+78961012 | None:intergenic |
| ATACTTCCTTAGCCCATTTC+TGG | 0.179895 | 7:+78961058 | None:intergenic |
| TAATTCTGCAGGAGAATTAA+AGG | 0.256912 | 7:-78961094 | MsG0780040543.01.T01:intron |
| ACACAGAGAGATTTGTTTGA+TGG | 0.322319 | 7:+78963692 | None:intergenic |
| CAACAAAAGCCTACCAGAAA+TGG | 0.329929 | 7:-78961071 | MsG0780040543.01.T01:CDS |
| AATTCCTCTTCAGAGGGTTC+TGG | 0.332420 | 7:+78960791 | None:intergenic |
| ACTGACCTTTCCTCTCATTT+CGG | 0.368205 | 7:+78960864 | None:intergenic |
| TAAAGGACTTGTGGGTGGTT+TGG | 0.373974 | 7:+78961029 | None:intergenic |
| TTCCTCTTTAAAGGACTTGT+GGG | 0.398805 | 7:+78961021 | None:intergenic |
| TTTCTCTTCGTCTCCAAGAA+TGG | 0.400542 | 7:+78962679 | None:intergenic |
| ACTTGACTCACACCGATTCA+AGG | 0.428801 | 7:-78961665 | MsG0780040543.01.T01:CDS |
| CTTCCTCTTTAAAGGACTTG+TGG | 0.442578 | 7:+78961020 | None:intergenic |
| ATCTTCAATTTCTTCATCAT+CGG | 0.442588 | 7:+78963636 | None:intergenic |
| TTCTTGGAGACGAAGAGAAA+CGG | 0.455460 | 7:-78962676 | MsG0780040543.01.T01:CDS |
| TCTTGGAGACGAAGAGAAAC+GGG | 0.461614 | 7:-78962675 | MsG0780040543.01.T01:CDS |
| GCGTCTCTAGTATCAAAGTA+TGG | 0.472145 | 7:-78960827 | MsG0780040543.01.T01:CDS |
| TGGCGCCGAGGAAGAAAACT+AGG | 0.485201 | 7:-78963663 | MsG0780040543.01.T01:CDS |
| AACAAAAGCCTACCAGAAAT+GGG | 0.487122 | 7:-78961070 | MsG0780040543.01.T01:CDS |
| TTTCAAAACAATGTACAAGA+AGG | 0.494913 | 7:-78961999 | MsG0780040543.01.T01:intron |
| TAATTTCTGCGGATCTACTC+TGG | 0.500867 | 7:-78960597 | MsG0780040543.01.T01:three_prime_UTR |
| TATGTGCAATGTAGTGTGAC+TGG | 0.506719 | 7:-78960564 | MsG0780040543.01.T01:three_prime_UTR |
| CATCAAGAATGTCCTTGAAT+CGG | 0.509603 | 7:+78961653 | None:intergenic |
| CTCTTTAAAGGACTTGTGGG+TGG | 0.519289 | 7:+78961024 | None:intergenic |
| CTTGATGAGGCTATAGCTGC+TGG | 0.521762 | 7:-78961637 | MsG0780040543.01.T01:intron |
| CACCCACAAGTCCTTTAAAG+AGG | 0.526019 | 7:-78961023 | MsG0780040543.01.T01:CDS |
| AGCTTCAAATTCCTCTTCAG+AGG | 0.534350 | 7:+78960784 | None:intergenic |
| GGAGTTTGAAGCAAACTACC+GGG | 0.541480 | 7:-78961872 | MsG0780040543.01.T01:CDS |
| CACAAGTCCTTTAAAGAGGA+AGG | 0.544290 | 7:-78961019 | MsG0780040543.01.T01:CDS |
| GCTTCAAATTCCTCTTCAGA+GGG | 0.547917 | 7:+78960785 | None:intergenic |
| ACCTCAAAAGACTCTCTACC+AGG | 0.549839 | 7:-78963611 | MsG0780040543.01.T01:intron |
| AGGAGTTTGAAGCAAACTAC+CGG | 0.550523 | 7:-78961873 | MsG0780040543.01.T01:CDS |
| ACATTTGATTACTACATGAA+AGG | 0.552769 | 7:+78960635 | None:intergenic |
| GTAATCAAATGTTAGTGTAA+TGG | 0.563971 | 7:-78960624 | MsG0780040543.01.T01:three_prime_UTR |
| TTCCTTAGCCCATTTCTGGT+AGG | 0.565926 | 7:+78961062 | None:intergenic |
| TCTGTTAATCAGGATCTGGC+AGG | 0.566964 | 7:-78962046 | MsG0780040543.01.T01:intron |
| GTAATGGTTGTTAATTTCTG+CGG | 0.570495 | 7:-78960608 | MsG0780040543.01.T01:three_prime_UTR |
| AGCCTACCAGAAATGGGCTA+AGG | 0.571998 | 7:-78961064 | MsG0780040543.01.T01:CDS |
| GGTCACTGAAGCTGATATTG+AGG | 0.586002 | 7:-78961893 | MsG0780040543.01.T01:CDS |
| CGGGCTCTCTATGATCAGAC+TGG | 0.592329 | 7:-78962656 | MsG0780040543.01.T01:CDS |
| TTGTGTGAAGTGTGAGAACA+TGG | 0.609468 | 7:-78960666 | MsG0780040543.01.T01:three_prime_UTR |
| TATCACAACGCCGAAATGAG+AGG | 0.612937 | 7:-78960874 | MsG0780040543.01.T01:CDS |
| TATGCCAGAACCCTCTGAAG+AGG | 0.616007 | 7:-78960795 | MsG0780040543.01.T01:CDS |
| ATTCAAGGACATTCTTGATG+AGG | 0.621008 | 7:-78961650 | MsG0780040543.01.T01:CDS |
| CAACGCCGAAATGAGAGGAA+AGG | 0.636406 | 7:-78960869 | MsG0780040543.01.T01:CDS |
| TCTCTAGTATCAAAGTATGG+TGG | 0.654748 | 7:-78960824 | MsG0780040543.01.T01:CDS |
| GGCGCCGAGGAAGAAAACTA+GGG | 0.675011 | 7:-78963662 | MsG0780040543.01.T01:CDS |
| GAGTTTGAAGCAAACTACCG+GGG | 0.707683 | 7:-78961871 | MsG0780040543.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATTATTTGTTTGT+TGG | - | Chr7:78961429-78961448 | MsG0780040543.01.T01:intron | 10.0% |
| !! | AACAATTAATACTCTTAAAT+TGG | - | Chr7:78962945-78962964 | MsG0780040543.01.T01:intron | 15.0% |
| !!! | AATTTAAGAGTATTAATTGT+TGG | + | Chr7:78962946-78962965 | None:intergenic | 15.0% |
| !!! | TGCTTAAATTTATTATTTTG+CGG | - | Chr7:78961015-78961034 | MsG0780040543.01.T01:CDS | 15.0% |
| !! | ATCAGAATATAGGAATATAA+TGG | - | Chr7:78961766-78961785 | MsG0780040543.01.T01:intron | 20.0% |
| !!! | AAGAAAGCATTATTAATTTG+TGG | - | Chr7:78962427-78962446 | MsG0780040543.01.T01:intron | 20.0% |
| !!! | CCATAGAAAAGTATTTATAA+TGG | + | Chr7:78963054-78963073 | None:intergenic | 20.0% |
| !!! | CCATTATAAATACTTTTCTA+TGG | - | Chr7:78963051-78963070 | MsG0780040543.01.T01:intron | 20.0% |
| !!! | GTCTGTTAAATTTTATTTGA+GGG | - | Chr7:78961724-78961743 | MsG0780040543.01.T01:intron | 20.0% |
| !!! | TTAATTGATTTACTCTGTAA+TGG | - | Chr7:78963251-78963270 | MsG0780040543.01.T01:intron | 20.0% |
| ! | AAAGAAGGCTTATTACAAAT+TGG | - | Chr7:78961329-78961348 | MsG0780040543.01.T01:intron | 25.0% |
| ! | AATACAAACTTTGTTCAACA+TGG | + | Chr7:78960798-78960817 | None:intergenic | 25.0% |
| ! | AATTAGCATATTAACTCCTT+TGG | - | Chr7:78962768-78962787 | MsG0780040543.01.T01:intron | 25.0% |
| ! | ACATCATTATCTATGTTAAC+CGG | + | Chr7:78962914-78962933 | None:intergenic | 25.0% |
| ! | ACATTTGATTACTACATGAA+AGG | + | Chr7:78963579-78963598 | None:intergenic | 25.0% |
| ! | ATAAAATTTAACAGACCACA+AGG | + | Chr7:78961720-78961739 | None:intergenic | 25.0% |
| ! | ATACTACTGAATCAGAATAT+AGG | - | Chr7:78961756-78961775 | MsG0780040543.01.T01:intron | 25.0% |
| ! | ATCTTCAATTTCTTCATCAT+CGG | + | Chr7:78960578-78960597 | None:intergenic | 25.0% |
| ! | ATTTGACCTATAAAAAGCAA+TGG | + | Chr7:78963286-78963305 | None:intergenic | 25.0% |
| ! | CAAATGATCCATTGAAAAAA+AGG | + | Chr7:78961158-78961177 | None:intergenic | 25.0% |
| ! | CATTAAACAAACAATCATCA+AGG | + | Chr7:78963091-78963110 | None:intergenic | 25.0% |
| ! | CTTTCTTAGAAAAATACCAA+AGG | + | Chr7:78962787-78962806 | None:intergenic | 25.0% |
| ! | GTAATCAAATGTTAGTGTAA+TGG | - | Chr7:78963587-78963606 | MsG0780040543.01.T01:intron | 25.0% |
| ! | TATGGGCATACATATATAAT+TGG | + | Chr7:78961887-78961906 | None:intergenic | 25.0% |
| ! | TTAGAGAATAGATAAATGTC+CGG | - | Chr7:78962892-78962911 | MsG0780040543.01.T01:intron | 25.0% |
| ! | TTTAGTCAGATATTTGGTAT+AGG | - | Chr7:78962631-78962650 | MsG0780040543.01.T01:intron | 25.0% |
| ! | TTTCAAAACAATGTACAAGA+AGG | - | Chr7:78962212-78962231 | MsG0780040543.01.T01:intron | 25.0% |
| ! | TTTGCTTAAATACCAAAATC+TGG | - | Chr7:78963025-78963044 | MsG0780040543.01.T01:intron | 25.0% |
| !! | AAATAACTTTTTGCAATTGC+TGG | + | Chr7:78961512-78961531 | None:intergenic | 25.0% |
| !! | CAAAAAGTTATTTCCATTCT+TGG | - | Chr7:78961519-78961538 | MsG0780040543.01.T01:intron | 25.0% |
| !! | TAGGAATATAATGGTGTTAA+CGG | - | Chr7:78961775-78961794 | MsG0780040543.01.T01:intron | 25.0% |
| !! | TTGATCTGTGAAATTTTCAA+TGG | - | Chr7:78960918-78960937 | MsG0780040543.01.T01:intron | 25.0% |
| !! | TTTGTATTTTGTGTGTGTTA+AGG | - | Chr7:78960810-78960829 | MsG0780040543.01.T01:CDS | 25.0% |
| !!! | CTTTTTTTCAATGGATCATT+TGG | - | Chr7:78961156-78961175 | MsG0780040543.01.T01:intron | 25.0% |
| !!! | GGTCTGTTAAATTTTATTTG+AGG | - | Chr7:78961723-78961742 | MsG0780040543.01.T01:intron | 25.0% |
| !!! | GTCAAGAATTATTTTTGTTG+AGG | + | Chr7:78961218-78961237 | None:intergenic | 25.0% |
| !!! | TATTTGTTTGTTGGCTTTTT+GGG | - | Chr7:78961438-78961457 | MsG0780040543.01.T01:intron | 25.0% |
| !!! | TGATTGCTTTGATTTTTTTG+AGG | + | Chr7:78963481-78963500 | None:intergenic | 25.0% |
| !!! | TGGTTAAACCTTTTTTTCAA+TGG | - | Chr7:78961147-78961166 | MsG0780040543.01.T01:intron | 25.0% |
| !!! | TTATTTGTTTGTTGGCTTTT+TGG | - | Chr7:78961437-78961456 | MsG0780040543.01.T01:intron | 25.0% |
| AAATCTCTCTGTGTGAAAAA+TGG | - | Chr7:78960528-78960547 | MsG0780040543.01.T01:three_prime_UTR | 30.0% | |
| AACCTAAAATGAAGTCACAA+CGG | + | Chr7:78961274-78961293 | None:intergenic | 30.0% | |
| AAGTACAAGGGAATATGAAA+AGG | - | Chr7:78962403-78962422 | MsG0780040543.01.T01:intron | 30.0% | |
| ACAAGTGGAACAAATAACAA+TGG | + | Chr7:78961190-78961209 | None:intergenic | 30.0% | |
| ATTAATCCGGCATAATATGT+TGG | - | Chr7:78961660-78961679 | MsG0780040543.01.T01:CDS | 30.0% | |
| ATTACAAAGTGGAAATTGAG+AGG | + | Chr7:78961839-78961858 | None:intergenic | 30.0% | |
| CATTATCTCTTCTGTTAATC+AGG | - | Chr7:78962155-78962174 | MsG0780040543.01.T01:intron | 30.0% | |
| CTAAAAGCAAAATAACTGCA+AGG | + | Chr7:78962736-78962755 | None:intergenic | 30.0% | |
| CTCTCAACAAGAAATAAAGA+AGG | - | Chr7:78961314-78961333 | MsG0780040543.01.T01:intron | 30.0% | |
| CTGTTCAAGATGAATTAATC+CGG | - | Chr7:78961647-78961666 | MsG0780040543.01.T01:CDS | 30.0% | |
| CTTAACATGTTCATTCAGAT+GGG | - | Chr7:78961917-78961936 | MsG0780040543.01.T01:intron | 30.0% | |
| CTTATTACAAATTGGCATTG+CGG | - | Chr7:78961337-78961356 | MsG0780040543.01.T01:intron | 30.0% | |
| GATTTACAATTTGAATGCCT+AGG | - | Chr7:78961682-78961701 | MsG0780040543.01.T01:CDS | 30.0% | |
| GGCATACATATATAATTGGA+AGG | + | Chr7:78961883-78961902 | None:intergenic | 30.0% | |
| GGTCTATGTTTCTTATAACT+AGG | - | Chr7:78962966-78962985 | MsG0780040543.01.T01:intron | 30.0% | |
| GTAAATCCAACATATTATGC+CGG | + | Chr7:78961669-78961688 | None:intergenic | 30.0% | |
| GTAATGGTTGTTAATTTCTG+CGG | - | Chr7:78963603-78963622 | MsG0780040543.01.T01:intron | 30.0% | |
| GTAATTACTTGTGTTCATAC+AGG | - | Chr7:78961470-78961489 | MsG0780040543.01.T01:intron | 30.0% | |
| TAATGTTCTCTTAATTCTGC+AGG | - | Chr7:78963106-78963125 | MsG0780040543.01.T01:intron | 30.0% | |
| TAATTCTGCAGGAGAATTAA+AGG | - | Chr7:78963117-78963136 | MsG0780040543.01.T01:intron | 30.0% | |
| TATCTGACTAAAACCTTGTT+CGG | + | Chr7:78962623-78962642 | None:intergenic | 30.0% | |
| TGTCCAAAATGCTAATTGTT+GGG | + | Chr7:78962097-78962116 | None:intergenic | 30.0% | |
| TTAATAGAACAAGCAAAACC+CGG | + | Chr7:78963235-78963254 | None:intergenic | 30.0% | |
| ! | AACCAGAGAACAAAGATTTT+TGG | + | Chr7:78961082-78961101 | None:intergenic | 30.0% |
| ! | CTTCTTTATTTCTTGTTGAG+AGG | + | Chr7:78961316-78961335 | None:intergenic | 30.0% |
| ! | TCTGTGAAATTTTCAATGGA+AGG | - | Chr7:78960922-78960941 | MsG0780040543.01.T01:intron | 30.0% |
| !! | ATAGGTTCTAGATTTGTTCT+TGG | - | Chr7:78961127-78961146 | MsG0780040543.01.T01:intron | 30.0% |
| !! | CAAGGTTTTAGTCAGATATT+TGG | - | Chr7:78962625-78962644 | MsG0780040543.01.T01:intron | 30.0% |
| !! | CTTGCAGTTATTTTGCTTTT+AGG | - | Chr7:78962734-78962753 | MsG0780040543.01.T01:intron | 30.0% |
| !! | TTATTTTGCGGCTAATTTCT+TGG | - | Chr7:78961027-78961046 | MsG0780040543.01.T01:CDS | 30.0% |
| !! | TTTACTTGGTCTTGATGATT+TGG | + | Chr7:78962815-78962834 | None:intergenic | 30.0% |
| !!! | ACTGATCCATTGCTTTTTAT+AGG | - | Chr7:78963277-78963296 | MsG0780040543.01.T01:intron | 30.0% |
| !!! | CGAGTATTGTGAGTATTTTT+TGG | + | Chr7:78962872-78962891 | None:intergenic | 30.0% |
| !!! | GCATTAGTCATTTTTGTAAG+AGG | - | Chr7:78962453-78962472 | MsG0780040543.01.T01:intron | 30.0% |
| !!! | TGACTTCATTTTAGGTTCTT+GGG | - | Chr7:78961277-78961296 | MsG0780040543.01.T01:intron | 30.0% |
| !!! | TTATAATGGACTCCAGATTT+TGG | + | Chr7:78963040-78963059 | None:intergenic | 30.0% |
| AAAAGCAAGTCAGTAGATAG+TGG | - | Chr7:78962706-78962725 | MsG0780040543.01.T01:CDS | 35.0% | |
| AAAGCAAGTCAGTAGATAGT+GGG | - | Chr7:78962707-78962726 | MsG0780040543.01.T01:CDS | 35.0% | |
| AACAAAAGCCTACCAGAAAT+GGG | - | Chr7:78963141-78963160 | MsG0780040543.01.T01:intron | 35.0% | |
| AGCGAAATGAAAATTTGCAG+AGG | + | Chr7:78960654-78960673 | None:intergenic | 35.0% | |
| ATGTTAAGCGAGACAGAATA+TGG | + | Chr7:78961905-78961924 | None:intergenic | 35.0% | |
| ATTACTTGTGTTCATACAGG+AGG | - | Chr7:78961473-78961492 | MsG0780040543.01.T01:intron | 35.0% | |
| ATTCAAGGACATTCTTGATG+AGG | - | Chr7:78962561-78962580 | MsG0780040543.01.T01:intron | 35.0% | |
| CAGAATCTCAGATTACAAAG+TGG | + | Chr7:78961850-78961869 | None:intergenic | 35.0% | |
| CATCAAGAATGTCCTTGAAT+CGG | + | Chr7:78962561-78962580 | None:intergenic | 35.0% | |
| GCACAGAAAAAGTTGGAAAA+GGG | - | Chr7:78963450-78963469 | MsG0780040543.01.T01:intron | 35.0% | |
| GCTTAACATGTTCATTCAGA+TGG | - | Chr7:78961916-78961935 | MsG0780040543.01.T01:intron | 35.0% | |
| GTCCAAAAATCTTTGTTCTC+TGG | - | Chr7:78961077-78961096 | MsG0780040543.01.T01:CDS | 35.0% | |
| GTGTCCAAAATGCTAATTGT+TGG | + | Chr7:78962098-78962117 | None:intergenic | 35.0% | |
| TAAAAAATCACCTCATCACC+AGG | + | Chr7:78961379-78961398 | None:intergenic | 35.0% | |
| TACTTTGCCTTCCTCTTTAA+AGG | + | Chr7:78963202-78963221 | None:intergenic | 35.0% | |
| TCTCTAGTATCAAAGTATGG+TGG | - | Chr7:78963387-78963406 | MsG0780040543.01.T01:intron | 35.0% | |
| TGCACAGAAAAAGTTGGAAA+AGG | - | Chr7:78963449-78963468 | MsG0780040543.01.T01:intron | 35.0% | |
| TGTTAAGCGAGACAGAATAT+GGG | + | Chr7:78961904-78961923 | None:intergenic | 35.0% | |
| TTAGCATGTGTTTAGATGCA+CGG | + | Chr7:78961249-78961268 | None:intergenic | 35.0% | |
| ! | ACACAGAGAGATTTGTTTGA+TGG | + | Chr7:78960522-78960541 | None:intergenic | 35.0% |
| ! | ATCCGTTGTGACTTCATTTT+AGG | - | Chr7:78961269-78961288 | MsG0780040543.01.T01:intron | 35.0% |
| ! | ATGCCCAACAATTAGCATTT+TGG | - | Chr7:78962091-78962110 | MsG0780040543.01.T01:intron | 35.0% |
| ! | CTCCTTCAAATGCTTTTACT+TGG | + | Chr7:78962829-78962848 | None:intergenic | 35.0% |
| ! | GAGCTGTACAAAAAGTACAA+GGG | - | Chr7:78962391-78962410 | MsG0780040543.01.T01:intron | 35.0% |
| ! | TAACTAGATTTTGCCGAACA+AGG | - | Chr7:78962607-78962626 | MsG0780040543.01.T01:intron | 35.0% |
| ! | TGAGCTGTACAAAAAGTACA+AGG | - | Chr7:78962390-78962409 | MsG0780040543.01.T01:intron | 35.0% |
| ! | TGTTCTCTGGTTTGATTGTT+TGG | - | Chr7:78961090-78961109 | MsG0780040543.01.T01:intron | 35.0% |
| ! | TTCCTCTTTAAAGGACTTGT+GGG | + | Chr7:78963193-78963212 | None:intergenic | 35.0% |
| !! | AAAGATTTTTGGACGCAGTT+TGG | + | Chr7:78961071-78961090 | None:intergenic | 35.0% |
| !! | GACCAAGTAAAAGCATTTGA+AGG | - | Chr7:78962824-78962843 | MsG0780040543.01.T01:intron | 35.0% |
| !! | GTTGTTTTGTAATGAACCAC+AGG | - | Chr7:78962297-78962316 | MsG0780040543.01.T01:intron | 35.0% |
| !!! | CTTGGTGTTGGATCTTTTTT+GGG | - | Chr7:78961045-78961064 | MsG0780040543.01.T01:CDS | 35.0% |
| !!! | GGTGATGAGGTGATTTTTTA+AGG | - | Chr7:78961379-78961398 | MsG0780040543.01.T01:intron | 35.0% |
| !!! | GTGACTTCATTTTAGGTTCT+TGG | - | Chr7:78961276-78961295 | MsG0780040543.01.T01:intron | 35.0% |
| !!! | TCTTGGTGTTGGATCTTTTT+TGG | - | Chr7:78961044-78961063 | MsG0780040543.01.T01:CDS | 35.0% |
| !!! | TTCATTTTAGGTTCTTGGGT+TGG | - | Chr7:78961281-78961300 | MsG0780040543.01.T01:intron | 35.0% |
| ACTGACCTTTCCTCTCATTT+CGG | + | Chr7:78963350-78963369 | None:intergenic | 40.0% | |
| AGCTTCAAATTCCTCTTCAG+AGG | + | Chr7:78963430-78963449 | None:intergenic | 40.0% | |
| ATACCACAATGCATCAGGAA+AGG | + | Chr7:78962261-78962280 | None:intergenic | 40.0% | |
| ATACTTCCTTAGCCCATTTC+TGG | + | Chr7:78963156-78963175 | None:intergenic | 40.0% | |
| ATAGGTCTTAGTTTCTACGC+AGG | - | Chr7:78962649-78962668 | MsG0780040543.01.T01:CDS | 40.0% | |
| ATCACCAGGATTCTTATGGA+TGG | + | Chr7:78961365-78961384 | None:intergenic | 40.0% | |
| CAACAAAAGCCTACCAGAAA+TGG | - | Chr7:78963140-78963159 | MsG0780040543.01.T01:intron | 40.0% | |
| CATGTATACCACAATGCATC+AGG | + | Chr7:78962266-78962285 | None:intergenic | 40.0% | |
| CTCTTCTGTTAATCAGGATC+TGG | - | Chr7:78962161-78962180 | MsG0780040543.01.T01:intron | 40.0% | |
| GCGTCTCTAGTATCAAAGTA+TGG | - | Chr7:78963384-78963403 | MsG0780040543.01.T01:intron | 40.0% | |
| GCTTCAAATTCCTCTTCAGA+GGG | + | Chr7:78963429-78963448 | None:intergenic | 40.0% | |
| TAATTTCTGCGGATCTACTC+TGG | - | Chr7:78963614-78963633 | MsG0780040543.01.T01:CDS | 40.0% | |
| TACCACAATGCATCAGGAAA+GGG | + | Chr7:78962260-78962279 | None:intergenic | 40.0% | |
| TATGTGCAATGTAGTGTGAC+TGG | - | Chr7:78963647-78963666 | MsG0780040543.01.T01:CDS | 40.0% | |
| TGAAGCTGCACAGAAAAAGT+TGG | - | Chr7:78963443-78963462 | MsG0780040543.01.T01:intron | 40.0% | |
| TTCTTGGAGACGAAGAGAAA+CGG | - | Chr7:78961535-78961554 | MsG0780040543.01.T01:intron | 40.0% | |
| TTGGAATTGCACTTGCACAT+AGG | - | Chr7:78961109-78961128 | MsG0780040543.01.T01:intron | 40.0% | |
| TTGTGTGAAGTGTGAGAACA+TGG | - | Chr7:78963545-78963564 | MsG0780040543.01.T01:intron | 40.0% | |
| TTTCTCTTCGTCTCCAAGAA+TGG | + | Chr7:78961535-78961554 | None:intergenic | 40.0% | |
| TTTGTTGAGGAGTCAACAAG+TGG | + | Chr7:78961205-78961224 | None:intergenic | 40.0% | |
| ! | AGGAGTTTGAAGCAAACTAC+CGG | - | Chr7:78962338-78962357 | MsG0780040543.01.T01:intron | 40.0% |
| ! | CACAAGTCCTTTAAAGAGGA+AGG | - | Chr7:78963192-78963211 | MsG0780040543.01.T01:intron | 40.0% |
| ! | CTTCCTCTTTAAAGGACTTG+TGG | + | Chr7:78963194-78963213 | None:intergenic | 40.0% |
| ! | GAAGGCTAGACTAGAGTATT+GGG | - | Chr7:78960940-78960959 | MsG0780040543.01.T01:intron | 40.0% |
| !! | CAAGGACTTGCTAAAAACCT+AGG | + | Chr7:78961702-78961721 | None:intergenic | 40.0% |
| !! | GAAACCCTAGTTTTCTTCCT+CGG | + | Chr7:78960556-78960575 | None:intergenic | 40.0% |
| !! | GCAAAGTAAGTTGATCAACC+GGG | - | Chr7:78963214-78963233 | MsG0780040543.01.T01:intron | 40.0% |
| !! | GGCAAAGTAAGTTGATCAAC+CGG | - | Chr7:78963213-78963232 | MsG0780040543.01.T01:intron | 40.0% |
| !! | TGCATTGATGATGATGTGAG+TGG | - | Chr7:78961579-78961598 | MsG0780040543.01.T01:intron | 40.0% |
| !!! | AGGTTTTTAGCAAGTCCTTG+TGG | - | Chr7:78961702-78961721 | MsG0780040543.01.T01:intron | 40.0% |
| !!! | TGTTTGTTGGCTTTTTGGGT+TGG | - | Chr7:78961442-78961461 | MsG0780040543.01.T01:intron | 40.0% |
| AAGCGTGAATTTGCGATACC+TGG | + | Chr7:78960621-78960640 | None:intergenic | 45.0% | |
| AATTCCTCTTCAGAGGGTTC+TGG | + | Chr7:78963423-78963442 | None:intergenic | 45.0% | |
| ACCACAATGCATCAGGAAAG+GGG | + | Chr7:78962259-78962278 | None:intergenic | 45.0% | |
| ACCTCAAAAGACTCTCTACC+AGG | - | Chr7:78960600-78960619 | MsG0780040543.01.T01:three_prime_UTR | 45.0% | |
| AGCCTTGGTCTCTCAATCTA+GGG | + | Chr7:78961813-78961832 | None:intergenic | 45.0% | |
| ATATCAGCTTCAGTGACCTG+TGG | + | Chr7:78962316-78962335 | None:intergenic | 45.0% | |
| CCTCATCACCAGGATTCTTA+TGG | + | Chr7:78961369-78961388 | None:intergenic | 45.0% | |
| GAAATTGAGAGGAAGAGCCT+TGG | + | Chr7:78961828-78961847 | None:intergenic | 45.0% | |
| GGAAGGCTAGACTAGAGTAT+TGG | - | Chr7:78960939-78960958 | MsG0780040543.01.T01:intron | 45.0% | |
| GGTCACTGAAGCTGATATTG+AGG | - | Chr7:78962318-78962337 | MsG0780040543.01.T01:intron | 45.0% | |
| TAAAGGACTTGTGGGTGGTT+TGG | + | Chr7:78963185-78963204 | None:intergenic | 45.0% | |
| TATCACAACGCCGAAATGAG+AGG | - | Chr7:78963337-78963356 | MsG0780040543.01.T01:intron | 45.0% | |
| TCTGTTAATCAGGATCTGGC+AGG | - | Chr7:78962165-78962184 | MsG0780040543.01.T01:intron | 45.0% | |
| TCTTGGAGACGAAGAGAAAC+GGG | - | Chr7:78961536-78961555 | MsG0780040543.01.T01:intron | 45.0% | |
| ! | ACCTGGTAGAGAGTCTTTTG+AGG | + | Chr7:78960604-78960623 | None:intergenic | 45.0% |
| ! | CACCCACAAGTCCTTTAAAG+AGG | - | Chr7:78963188-78963207 | MsG0780040543.01.T01:intron | 45.0% |
| ! | CCATAAGAATCCTGGTGATG+AGG | - | Chr7:78961366-78961385 | MsG0780040543.01.T01:intron | 45.0% |
| ! | CTCTTTAAAGGACTTGTGGG+TGG | + | Chr7:78963190-78963209 | None:intergenic | 45.0% |
| ! | GAGTTTGAAGCAAACTACCG+GGG | - | Chr7:78962340-78962359 | MsG0780040543.01.T01:intron | 45.0% |
| ! | GGAGTTTGAAGCAAACTACC+GGG | - | Chr7:78962339-78962358 | MsG0780040543.01.T01:intron | 45.0% |
| ! | TGCGGCTAATTTCTTGGTGT+TGG | - | Chr7:78961033-78961052 | MsG0780040543.01.T01:CDS | 45.0% |
| ! | TTTTCTCTGAGTCAGAACCC+CGG | + | Chr7:78962360-78962379 | None:intergenic | 45.0% |
| !! | ACTTGACTCACACCGATTCA+AGG | - | Chr7:78962546-78962565 | MsG0780040543.01.T01:intron | 45.0% |
| !! | GATGATGTGAGTGGTGTTGT+TGG | - | Chr7:78961588-78961607 | MsG0780040543.01.T01:intron | 45.0% |
| !! | GGTTCTTGGGTTGGAGAAAA+CGG | - | Chr7:78961290-78961309 | MsG0780040543.01.T01:intron | 45.0% |
| !! | TAAGGCTGCTTGTTATGCTG+TGG | - | Chr7:78961397-78961416 | MsG0780040543.01.T01:intron | 45.0% |
| !! | TTCCTTAGCCCATTTCTGGT+AGG | + | Chr7:78963152-78963171 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTTTTATGT+TGG | - | Chr7:78960719-78960738 | MsG0780040543.01.T01:exon | 5.0% |
| CAACGCCGAAATGAGAGGAA+AGG | - | Chr7:78963342-78963361 | MsG0780040543.01.T01:intron | 50.0% | |
| CTTGATGAGGCTATAGCTGC+TGG | - | Chr7:78962574-78962593 | MsG0780040543.01.T01:intron | 50.0% | |
| GAGCCTTGGTCTCTCAATCT+AGG | + | Chr7:78961814-78961833 | None:intergenic | 50.0% | |
| GAGGCTATAGCTGCTGGTAA+GGG | - | Chr7:78962580-78962599 | MsG0780040543.01.T01:intron | 50.0% | |
| GCCTTGGTCTCTCAATCTAG+GGG | + | Chr7:78961812-78961831 | None:intergenic | 50.0% | |
| GGCTCCATCCATAAGAATCC+TGG | - | Chr7:78961358-78961377 | MsG0780040543.01.T01:intron | 50.0% | |
| TCCCCTTTCCTGATGCATTG+TGG | - | Chr7:78962255-78962274 | MsG0780040543.01.T01:intron | 50.0% | |
| TGAGGCTATAGCTGCTGGTA+AGG | - | Chr7:78962579-78962598 | MsG0780040543.01.T01:intron | 50.0% | |
| ! | TATGCCAGAACCCTCTGAAG+AGG | - | Chr7:78963416-78963435 | MsG0780040543.01.T01:intron | 50.0% |
| !! | AGCCTACCAGAAATGGGCTA+AGG | - | Chr7:78963147-78963166 | MsG0780040543.01.T01:intron | 50.0% |
| CGGGCTCTCTATGATCAGAC+TGG | - | Chr7:78961555-78961574 | MsG0780040543.01.T01:intron | 55.0% | |
| CTGTGTGAAAAATGGCGCCG+AGG | - | Chr7:78960536-78960555 | MsG0780040543.01.T01:three_prime_UTR | 55.0% | |
| GCCCCTAGATTGAGAGACCA+AGG | - | Chr7:78961808-78961827 | MsG0780040543.01.T01:intron | 55.0% | |
| ! | GGCGCCGAGGAAGAAAACTA+GGG | - | Chr7:78960549-78960568 | MsG0780040543.01.T01:three_prime_UTR | 55.0% |
| ! | TGGCGCCGAGGAAGAAAACT+AGG | - | Chr7:78960548-78960567 | MsG0780040543.01.T01:three_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 78960471 | 78963762 | 78960471 | ID=MsG0780040543.01;Name=MsG0780040543.01 |
| Chr7 | mRNA | 78960471 | 78963762 | 78960471 | ID=MsG0780040543.01.T01;Parent=MsG0780040543.01;Name=MsG0780040543.01.T01;_AED=0.41;_eAED=0.41;_QI=76|0.66|0.85|1|1|1|7|250|235 |
| Chr7 | exon | 78960471 | 78960934 | 78960471 | ID=MsG0780040543.01.T01:exon:16210;Parent=MsG0780040543.01.T01 |
| Chr7 | exon | 78961015 | 78961105 | 78961015 | ID=MsG0780040543.01.T01:exon:16209;Parent=MsG0780040543.01.T01 |
| Chr7 | exon | 78961638 | 78961720 | 78961638 | ID=MsG0780040543.01.T01:exon:16208;Parent=MsG0780040543.01.T01 |
| Chr7 | exon | 78961829 | 78961914 | 78961829 | ID=MsG0780040543.01.T01:exon:16207;Parent=MsG0780040543.01.T01 |
| Chr7 | exon | 78962000 | 78962056 | 78962000 | ID=MsG0780040543.01.T01:exon:16206;Parent=MsG0780040543.01.T01 |
| Chr7 | exon | 78962640 | 78962741 | 78962640 | ID=MsG0780040543.01.T01:exon:16205;Parent=MsG0780040543.01.T01 |
| Chr7 | exon | 78963612 | 78963762 | 78963612 | ID=MsG0780040543.01.T01:exon:16204;Parent=MsG0780040543.01.T01 |
| Chr7 | five_prime_UTR | 78963687 | 78963762 | 78963687 | ID=MsG0780040543.01.T01:five_prime_utr;Parent=MsG0780040543.01.T01 |
| Chr7 | CDS | 78963612 | 78963686 | 78963612 | ID=MsG0780040543.01.T01:cds;Parent=MsG0780040543.01.T01 |
| Chr7 | CDS | 78962640 | 78962741 | 78962640 | ID=MsG0780040543.01.T01:cds;Parent=MsG0780040543.01.T01 |
| Chr7 | CDS | 78962000 | 78962056 | 78962000 | ID=MsG0780040543.01.T01:cds;Parent=MsG0780040543.01.T01 |
| Chr7 | CDS | 78961829 | 78961914 | 78961829 | ID=MsG0780040543.01.T01:cds;Parent=MsG0780040543.01.T01 |
| Chr7 | CDS | 78961638 | 78961720 | 78961638 | ID=MsG0780040543.01.T01:cds;Parent=MsG0780040543.01.T01 |
| Chr7 | CDS | 78961015 | 78961105 | 78961015 | ID=MsG0780040543.01.T01:cds;Parent=MsG0780040543.01.T01 |
| Chr7 | CDS | 78960721 | 78960934 | 78960721 | ID=MsG0780040543.01.T01:cds;Parent=MsG0780040543.01.T01 |
| Chr7 | three_prime_UTR | 78960471 | 78960720 | 78960471 | ID=MsG0780040543.01.T01:three_prime_utr;Parent=MsG0780040543.01.T01 |
| Gene Sequence |
| Protein sequence |
