AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015871.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015871.01.T01 MTR_3g079220 92.177 294 14 2 1 292 1 287 0.0 542
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015871.01.T01 AT2G41350 74.905 263 66 0 5 267 13 275 6.06e-144 407
MsG0380015871.01.T01 AT2G41350 74.621 264 66 1 5 267 13 276 3.81e-142 402
MsG0380015871.01.T01 AT2G21980 77.500 40 9 0 228 267 1 40 2.46e-14 67.0

Find 87 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTGCAACTTCGAAGGTTT+TGG 0.267923 3:+76119167 None:intergenic
GAGACGAGCGGCTTCGTCTT+TGG 0.285848 3:+76119071 None:intergenic
TCAGTCTCCACAGAAGTTTC+TGG 0.296590 3:-76119216 MsG0380015871.01.T01:CDS
TGCAAGGATTAGAGAGATTC+TGG 0.305262 3:-76118914 MsG0380015871.01.T01:CDS
AGAGATTAGCCATAGGGTTT+TGG 0.308633 3:-76115788 MsG0380015871.01.T01:CDS
TCCAAAACCTTCGAAGTTGC+AGG 0.358974 3:-76119168 MsG0380015871.01.T01:CDS
TGCCTACAACAATGATATAT+TGG 0.367113 3:-76115387 MsG0380015871.01.T01:CDS
GCGTGGTGTGTATTCGAATT+CGG 0.370925 3:+76119134 None:intergenic
ATCTATATTCTGCGGCTTTG+AGG 0.378929 3:+76119031 None:intergenic
GAGCTACTTCATCTTCCAAT+TGG 0.383390 3:+76118221 None:intergenic
TTTAGCTTTCTTGTGGCAAT+GGG 0.405983 3:-76118706 MsG0380015871.01.T01:intron
CGTGGTGTGTATTCGAATTC+GGG 0.408134 3:+76119135 None:intergenic
CGAGGTTAACATATTTGAAA+AGG 0.410169 3:-76118588 MsG0380015871.01.T01:intron
GCGACGGTGGTGATTGGAAA+TGG 0.413115 3:+76119321 None:intergenic
TATTTAGCGACGGTGGTGAT+TGG 0.415970 3:+76119315 None:intergenic
AAAACCCTATGGCTAATCTC+TGG 0.417355 3:+76115790 None:intergenic
TCTTCTCGATTATACTAGAA+AGG 0.427173 3:-76118617 MsG0380015871.01.T01:CDS
GTGCAGAACACTAGCCCAAT+TGG 0.431088 3:-76118236 MsG0380015871.01.T01:intron
GTGTATTCGAATTCGGGAAC+GGG 0.431311 3:+76119141 None:intergenic
GATTCTGGAGAATGTAGGTT+TGG 0.441568 3:-76118899 MsG0380015871.01.T01:CDS
AGAGAGATTCTGGAGAATGT+AGG 0.442677 3:-76118904 MsG0380015871.01.T01:CDS
GGACATTGATTCTCGAAGTC+TGG 0.443302 3:+76119251 None:intergenic
GAAATACCGGAGGCAAATCT+TGG 0.443503 3:+76115695 None:intergenic
CAATGTGGTTGCGTCGGCGC+AGG 0.443838 3:-76118857 MsG0380015871.01.T01:CDS
AGACCGGTGTGGAGGAGAAA+AGG 0.446370 3:-76118666 MsG0380015871.01.T01:CDS
CACCAATATATCATTGTTGT+AGG 0.454100 3:+76115385 None:intergenic
GGTAACTTCTTAGAGTATCA+AGG 0.454855 3:+76115716 None:intergenic
TTGGTGGTTCAGTTGATGAA+TGG 0.466511 3:-76115368 MsG0380015871.01.T01:CDS
AGCTACTTCATCTTCCAATT+GGG 0.469118 3:+76118222 None:intergenic
GAAAAGGGCTAAAGTGCATA+AGG 0.474248 3:-76118650 MsG0380015871.01.T01:CDS
TGTGTATTCGAATTCGGGAA+CGG 0.481161 3:+76119140 None:intergenic
TAAGAGATACTGAACTTAGT+AGG 0.497045 3:-76118804 MsG0380015871.01.T01:intron
AAACCCTATGGCTAATCTCT+GGG 0.498715 3:+76115791 None:intergenic
AAATAAACTAACCTCATAGT+TGG 0.499847 3:+76118117 None:intergenic
GGAGAATGTAGGTTTGGCTC+AGG 0.504384 3:-76118893 MsG0380015871.01.T01:CDS
GATTATCCAGGATAAAGCTC+TGG 0.506748 3:-76115586 MsG0380015871.01.T01:intron
ACCGTCCAATGTGGTTGCGT+CGG 0.519517 3:-76118863 MsG0380015871.01.T01:CDS
GGCTGAGCATAGGAAGGAGC+TGG 0.522874 3:-76115758 MsG0380015871.01.T01:CDS
GACCGGTGTGGAGGAGAAAA+GGG 0.529132 3:-76118665 MsG0380015871.01.T01:CDS
GTCTGGATCGGAGAGGTGGT+TGG 0.532288 3:+76119268 None:intergenic
CTGCGCCGACGCAACCACAT+TGG 0.532875 3:+76118858 None:intergenic
AGCTCCGTGTGAGGCTCAGA+TGG 0.536186 3:-76118203 MsG0380015871.01.T01:CDS
GATATTTCATTGAGGAAGAC+CGG 0.541804 3:-76118682 MsG0380015871.01.T01:CDS
GCAACAATGTGCCAACTATG+AGG 0.550825 3:-76118128 MsG0380015871.01.T01:intron
CTTCTTAGAGTATCAAGGAT+GGG 0.552403 3:+76115721 None:intergenic
TAGGCAGCAGTATACAAGCC+TGG 0.553223 3:+76115404 None:intergenic
TACCCCAGAGATTAGCCATA+GGG 0.553381 3:-76115794 MsG0380015871.01.T01:CDS
GGGTTTACCTGCAACTTCGA+AGG 0.554455 3:+76119161 None:intergenic
GTGAGGCTCAGATGGAAAGT+TGG 0.555194 3:-76118195 MsG0380015871.01.T01:CDS
AGCATAGGAAGGAGCTGGAG+AGG 0.563485 3:-76115753 MsG0380015871.01.T01:CDS
GAATCAGCGAAGTAAAAGAA+TGG 0.564127 3:-76119194 MsG0380015871.01.T01:CDS
CCATGTCAACCAAAACCCTA+TGG 0.565389 3:+76115779 None:intergenic
TCGATCTGTGATGTGGTGGT+TGG 0.568177 3:+76119351 None:intergenic
ACCTTGGGATCTATATTCTG+CGG 0.568417 3:+76119023 None:intergenic
CTACAACAATGATATATTGG+TGG 0.574874 3:-76115384 MsG0380015871.01.T01:CDS
TGGTTGACATGGCTGAGCAT+AGG 0.579448 3:-76115768 MsG0380015871.01.T01:CDS
GCAGACGAGGCTCAACCGTG+TGG 0.588667 3:-76115821 MsG0380015871.01.T01:intron
AAGTTACCAAGATTTGCCTC+CGG 0.589613 3:-76115701 MsG0380015871.01.T01:intron
GCCGCAGAATATAGATCCCA+AGG 0.591800 3:-76119024 MsG0380015871.01.T01:intron
TTGATTCTCGAAGTCTGGAT+CGG 0.592442 3:+76119256 None:intergenic
CTTTCCATCTGAGCCTCACA+CGG 0.596528 3:+76118199 None:intergenic
ACTTCTTAGAGTATCAAGGA+TGG 0.600198 3:+76115720 None:intergenic
CGAAGTCTGGATCGGAGAGG+TGG 0.601504 3:+76119264 None:intergenic
GCCGACGCAACCACATTGGA+CGG 0.603040 3:+76118862 None:intergenic
GGAGACTGATGCTTCTTGAT+CGG 0.607951 3:+76119230 None:intergenic
ATTGAGGAAGACCGGTGTGG+AGG 0.608171 3:-76118674 MsG0380015871.01.T01:CDS
ATACCCCAGAGATTAGCCAT+AGG 0.609024 3:-76115795 MsG0380015871.01.T01:CDS
CTTTAGAGAGAGTAACGAGA+TGG 0.609598 3:+76119094 None:intergenic
GCTGATTCCAGAAACTTCTG+TGG 0.613746 3:+76119209 None:intergenic
TGACATGGCTGAGCATAGGA+AGG 0.617304 3:-76115764 MsG0380015871.01.T01:CDS
GCACGGTGGTTATTTAGCGA+CGG 0.620879 3:+76119305 None:intergenic
CAATGGGTGATATTTCATTG+AGG 0.630300 3:-76118690 MsG0380015871.01.T01:CDS
TCGCTAAATAACCACCGTGC+CGG 0.630367 3:-76119302 MsG0380015871.01.T01:five_prime_UTR
CAGACGAGGCTCAACCGTGT+GGG 0.631934 3:-76115820 MsG0380015871.01.T01:CDS
ATCACGAGCGACGAGACGAG+CGG 0.645010 3:+76119059 None:intergenic
GAGCAATTACTTGAATGTGA+TGG 0.645492 3:-76118173 MsG0380015871.01.T01:CDS
TTCATTGAGGAAGACCGGTG+TGG 0.650963 3:-76118677 MsG0380015871.01.T01:CDS
TCGATCGATCTGTGATGTGG+TGG 0.654220 3:+76119347 None:intergenic
AACCCTATGGCTAATCTCTG+GGG 0.660250 3:+76115792 None:intergenic
CGGTGGTTATTTAGCGACGG+TGG 0.664949 3:+76119308 None:intergenic
ATACTAGAAAGGCTATTGCG+AGG 0.667502 3:-76118606 MsG0380015871.01.T01:CDS
GGAGAGTTTACCGTCCAATG+TGG 0.679839 3:-76118872 MsG0380015871.01.T01:CDS
AGATGAAGTAGCTCCGTGTG+AGG 0.688922 3:-76118212 MsG0380015871.01.T01:CDS
TCTCTGGGGTATAGCCCACA+CGG 0.692148 3:+76115806 None:intergenic
AGATCGATCGATCTGTGATG+TGG 0.700311 3:+76119344 None:intergenic
TCTCGAAGTCTGGATCGGAG+AGG 0.745542 3:+76119261 None:intergenic
TGCAAGTGAGAGACACTGCG+TGG 0.791418 3:+76119117 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGGAAATATTAATTATTTT+AGG - Chr3:76118346-76118365 MsG0380015871.01.T01:intron 10.0%
!!! TATTACTTTTTTATGAAATA+AGG - Chr3:76117756-76117775 MsG0380015871.01.T01:intron 10.0%
!!! TGGAAATATTAATTATTTTA+GGG - Chr3:76118347-76118366 MsG0380015871.01.T01:intron 10.0%
!! GTATATATATAGGATAAATT+TGG - Chr3:76117262-76117281 MsG0380015871.01.T01:intron 15.0%
!! TATTATTAATGAAATTCTCT+GGG - Chr3:76117379-76117398 MsG0380015871.01.T01:intron 15.0%
!!! AAATGATGATAGTATTTTTT+AGG - Chr3:76117633-76117652 MsG0380015871.01.T01:intron 15.0%
!!! AATGAATTTTATCACAAAAT+TGG - Chr3:76118182-76118201 MsG0380015871.01.T01:CDS 15.0%
!!! ATGAATTTTATCACAAAATT+GGG - Chr3:76118183-76118202 MsG0380015871.01.T01:CDS 15.0%
!!! GCATTGTTATTTTTATATAT+TGG - Chr3:76118830-76118849 MsG0380015871.01.T01:CDS 15.0%
!!! TTTTGTGATAAAATTCATTT+TGG + Chr3:76118181-76118200 None:intergenic 15.0%
!!! TTTTGTTATTTCAATATTCT+AGG + Chr3:76116820-76116839 None:intergenic 15.0%
!! AAGAATATCATAACATAGAT+TGG + Chr3:76118565-76118584 None:intergenic 20.0%
!! AAGATCATCAAACATAAAAA+AGG - Chr3:76117951-76117970 MsG0380015871.01.T01:intron 20.0%
!! AATTTAGAAAATTGTGTAGA+AGG - Chr3:76117312-76117331 MsG0380015871.01.T01:intron 20.0%
!! AGAATATCATAACATAGATT+GGG + Chr3:76118564-76118583 None:intergenic 20.0%
!! AGATCATCAAACATAAAAAA+GGG - Chr3:76117952-76117971 MsG0380015871.01.T01:intron 20.0%
!! ATATATAGGATAAATTTGGA+TGG - Chr3:76117266-76117285 MsG0380015871.01.T01:intron 20.0%
!! GAGAATTTCATTAATAATAC+TGG + Chr3:76117378-76117397 None:intergenic 20.0%
!! GTAAAAATGTAAAATGAATG+TGG - Chr3:76116319-76116338 MsG0380015871.01.T01:intron 20.0%
!! GTATTATTAATGAAATTCTC+TGG - Chr3:76117378-76117397 MsG0380015871.01.T01:intron 20.0%
!! TCTTAATTGAAAACAATTCT+GGG + Chr3:76117205-76117224 None:intergenic 20.0%
!! TGAATTTGATGTTAGATAAA+AGG - Chr3:76116693-76116712 MsG0380015871.01.T01:intron 20.0%
!! TTAACATATTTGAAAAGGTA+TGG - Chr3:76116124-76116143 MsG0380015871.01.T01:intron 20.0%
!! TTAGCAATTGAAGATAAAAA+AGG - Chr3:76119149-76119168 MsG0380015871.01.T01:CDS 20.0%
!! TTCTTAATTGAAAACAATTC+TGG + Chr3:76117206-76117225 None:intergenic 20.0%
!!! AAAGTTTGAATTTTGGAATT+GGG - Chr3:76115973-76115992 MsG0380015871.01.T01:intron 20.0%
!!! AATTTAATTTGTCCAATCAA+AGG + Chr3:76118274-76118293 None:intergenic 20.0%
!!! AATTTCAAAGCACATTTTTT+GGG - Chr3:76119254-76119273 MsG0380015871.01.T01:exon 20.0%
!!! ACTTGAATTTGACAATTTTA+AGG + Chr3:76117865-76117884 None:intergenic 20.0%
!!! ATTTTAGCTGTAATTTTTGT+CGG - Chr3:76116990-76117009 MsG0380015871.01.T01:intron 20.0%
!!! GATTAATACTTGTTAATGTT+CGG - Chr3:76117896-76117915 MsG0380015871.01.T01:intron 20.0%
!!! TAAAGTTTGAATTTTGGAAT+TGG - Chr3:76115972-76115991 MsG0380015871.01.T01:intron 20.0%
!!! TAATTTCAAAGCACATTTTT+TGG - Chr3:76119253-76119272 MsG0380015871.01.T01:exon 20.0%
!!! TGAATTTTATCACAAAATTG+GGG - Chr3:76118184-76118203 MsG0380015871.01.T01:CDS 20.0%
!!! TGGTTTTGAACTAAAAATTT+AGG - Chr3:76116144-76116163 MsG0380015871.01.T01:intron 20.0%
!!! TTTTTTATCTTCAATTGCTA+AGG + Chr3:76119150-76119169 None:intergenic 20.0%
! AAAACACATAGAATTGAAGT+GGG - Chr3:76117423-76117442 MsG0380015871.01.T01:intron 25.0%
! AAATAAACTAACCTCATAGT+TGG + Chr3:76116593-76116612 None:intergenic 25.0%
! AATCAAGAAAGAATGAGATT+TGG - Chr3:76117663-76117682 MsG0380015871.01.T01:intron 25.0%
! ACGGATAACATATTATAAAC+TGG - Chr3:76118781-76118800 MsG0380015871.01.T01:intron 25.0%
! AGCTGTAAAAATTAATACTG+TGG - Chr3:76116218-76116237 MsG0380015871.01.T01:intron 25.0%
! ATAATAGATTGTAACACATG+TGG + Chr3:76117739-76117758 None:intergenic 25.0%
! ATCAAGAAAGAATGAGATTT+GGG - Chr3:76117664-76117683 MsG0380015871.01.T01:intron 25.0%
! ATCATCAAACATAAAAAAGG+GGG - Chr3:76117954-76117973 MsG0380015871.01.T01:intron 25.0%
! ATGCAATAAAACCAGTTTAA+TGG + Chr3:76116794-76116813 None:intergenic 25.0%
! CAAGAGATATAGTTAGAAAA+AGG - Chr3:76116737-76116756 MsG0380015871.01.T01:intron 25.0%
! GATCATCAAACATAAAAAAG+GGG - Chr3:76117953-76117972 MsG0380015871.01.T01:intron 25.0%
! GCATGAAAAATATGAAATAC+CGG + Chr3:76119028-76119047 None:intergenic 25.0%
! TAAAACACATAGAATTGAAG+TGG - Chr3:76117422-76117441 MsG0380015871.01.T01:intron 25.0%
! TAATAGATTGTAACACATGT+GGG + Chr3:76117738-76117757 None:intergenic 25.0%
! TAGTCAAATTAAAACTGTCT+AGG + Chr3:76116358-76116377 None:intergenic 25.0%
! TCAGTGTCTATCTTATAAAT+GGG + Chr3:76117514-76117533 None:intergenic 25.0%
! TGCAATAAAACCAGTTTAAT+GGG + Chr3:76116793-76116812 None:intergenic 25.0%
!! CTGTGTTAAAGTTTGAATTT+TGG - Chr3:76115966-76115985 MsG0380015871.01.T01:intron 25.0%
!! TTTATGTTTGATGATCTTGA+TGG + Chr3:76117949-76117968 None:intergenic 25.0%
!!! AGGTTAGTTTATTTGTTTTG+AGG - Chr3:76116599-76116618 MsG0380015871.01.T01:intron 25.0%
!!! CTTTCTATTTGTTTTAGTTC+TGG - Chr3:76119047-76119066 MsG0380015871.01.T01:CDS 25.0%
!!! GGTTAGTTTATTTGTTTTGA+GGG - Chr3:76116600-76116619 MsG0380015871.01.T01:intron 25.0%
!!! GTGATAAAATTCATTTTGGT+AGG + Chr3:76118177-76118196 None:intergenic 25.0%
!!! GTTAGTTTATTTGTTTTGAG+GGG - Chr3:76116601-76116620 MsG0380015871.01.T01:intron 25.0%
!!! TAATTATTTTAGGGTCTGTT+CGG - Chr3:76118356-76118375 MsG0380015871.01.T01:intron 25.0%
!!! TTAAGAGAGTCAGTTTTTTT+TGG + Chr3:76118673-76118692 None:intergenic 25.0%
!!! TTAGTTTATTTGTTTTGAGG+GGG - Chr3:76116602-76116621 MsG0380015871.01.T01:intron 25.0%
AAACTACAATAATGTGCTCA+AGG - Chr3:76116382-76116401 MsG0380015871.01.T01:intron 30.0%
AAAGAATGAGATTTGGGAAT+TGG - Chr3:76117670-76117689 MsG0380015871.01.T01:intron 30.0%
AACTACAATAATGTGCTCAA+GGG - Chr3:76116383-76116402 MsG0380015871.01.T01:intron 30.0%
AAGGAGTAAATTTGATTCTG+AGG - Chr3:76117804-76117823 MsG0380015871.01.T01:intron 30.0%
AATAAGGAAATGTTGTTCAG+TGG - Chr3:76117772-76117791 MsG0380015871.01.T01:intron 30.0%
AATAGATTGTAACACATGTG+GGG + Chr3:76117737-76117756 None:intergenic 30.0%
AGAAGGATGTTAAGTAAATC+AGG - Chr3:76117329-76117348 MsG0380015871.01.T01:intron 30.0%
AGATTTGGGAATTGGAAATT+GGG - Chr3:76117678-76117697 MsG0380015871.01.T01:intron 30.0%
AGGAGTAAATTTGATTCTGA+GGG - Chr3:76117805-76117824 MsG0380015871.01.T01:intron 30.0%
AGTTAGAAAAAGGACAGAAA+AGG - Chr3:76116747-76116766 MsG0380015871.01.T01:intron 30.0%
ATAAGGAAATGTTGTTCAGT+GGG - Chr3:76117773-76117792 MsG0380015871.01.T01:intron 30.0%
ATGTTAGATAAAAGGCTGTA+GGG - Chr3:76116701-76116720 MsG0380015871.01.T01:intron 30.0%
ATGTTCGGTATAAAATTCTC+AGG - Chr3:76117911-76117930 MsG0380015871.01.T01:intron 30.0%
ATTATCACCAATTAGGGTTA+GGG - Chr3:76115722-76115741 MsG0380015871.01.T01:CDS 30.0%
CAAAGACTAAGAGTCAATTT+GGG + Chr3:76118761-76118780 None:intergenic 30.0%
CACCAATATATCATTGTTGT+AGG + Chr3:76119325-76119344 None:intergenic 30.0%
CGAGGTTAACATATTTGAAA+AGG - Chr3:76116119-76116138 MsG0380015871.01.T01:intron 30.0%
CTACAACAATGATATATTGG+TGG - Chr3:76119323-76119342 MsG0380015871.01.T01:five_prime_UTR 30.0%
CTTGAACAAGAGAAACAAAA+AGG - Chr3:76116844-76116863 MsG0380015871.01.T01:intron 30.0%
GGGTAAAAGATCATAAAGTT+TGG - Chr3:76117698-76117717 MsG0380015871.01.T01:intron 30.0%
GTCAGTGTCTATCTTATAAA+TGG + Chr3:76117515-76117534 None:intergenic 30.0%
TAAGAGATACTGAACTTAGT+AGG - Chr3:76115903-76115922 MsG0380015871.01.T01:intron 30.0%
TACTATCATCATTTCGTCAA+TGG + Chr3:76117627-76117646 None:intergenic 30.0%
TATCATTCTCTACAAATGAC+AGG - Chr3:76118622-76118641 MsG0380015871.01.T01:CDS 30.0%
TCAAAGACTAAGAGTCAATT+TGG + Chr3:76118762-76118781 None:intergenic 30.0%
TCATCAAACATAAAAAAGGG+GGG - Chr3:76117955-76117974 MsG0380015871.01.T01:intron 30.0%
TCTTCTCGATTATACTAGAA+AGG - Chr3:76116090-76116109 MsG0380015871.01.T01:intron 30.0%
TGAAAAATATGAAATACCGG+AGG + Chr3:76119025-76119044 None:intergenic 30.0%
TGCCTACAACAATGATATAT+TGG - Chr3:76119320-76119339 MsG0380015871.01.T01:five_prime_UTR 30.0%
TGGAAGAAATTGAAGAATCT+GGG - Chr3:76118425-76118444 MsG0380015871.01.T01:intron 30.0%
TGTAAAATGAATGTGGAACT+TGG - Chr3:76116326-76116345 MsG0380015871.01.T01:intron 30.0%
TTTCGTATAGCAATTCAGTT+TGG + Chr3:76117028-76117047 None:intergenic 30.0%
! AATTGACTCTTAGTCTTTGA+CGG - Chr3:76118762-76118781 MsG0380015871.01.T01:intron 30.0%
! GAGCACATTATTGTAGTTTT+TGG + Chr3:76116381-76116400 None:intergenic 30.0%
! TAACCCTAATTGGTGATAAT+GGG + Chr3:76115722-76115741 None:intergenic 30.0%
! TAAGATTCTGTTTTCAAACC+AGG - Chr3:76119285-76119304 MsG0380015871.01.T01:five_prime_UTR 30.0%
! TTCTATGTGTTTTATCTCAG+CGG + Chr3:76117416-76117435 None:intergenic 30.0%
!! ATAATACTGGCTCTATTCAA+TGG + Chr3:76117365-76117384 None:intergenic 30.0%
!! GATCTTGATGGATTAAAGAT+AGG + Chr3:76117937-76117956 None:intergenic 30.0%
!! TTGAGCATTGATACATAACT+TGG - Chr3:76116179-76116198 MsG0380015871.01.T01:intron 30.0%
!!! AATTATTTTAGGGTCTGTTC+GGG - Chr3:76118357-76118376 MsG0380015871.01.T01:intron 30.0%
!!! GGTTTTTTTTAGCTTTCTTG+TGG - Chr3:76115994-76116013 MsG0380015871.01.T01:intron 30.0%
!!! TAGTTTATTTGTTTTGAGGG+GGG - Chr3:76116603-76116622 MsG0380015871.01.T01:intron 30.0%
AAAAAGGACAGAAAAGGAAG+CGG - Chr3:76116753-76116772 MsG0380015871.01.T01:intron 35.0%
AACCACAGTATAGAATCTCA+TGG - Chr3:76118327-76118346 MsG0380015871.01.T01:intron 35.0%
AACCTACATTTGCTCAAGAT+TGG - Chr3:76117837-76117856 MsG0380015871.01.T01:intron 35.0%
AATTTGTCCAATCAAAGGTG+AGG + Chr3:76118269-76118288 None:intergenic 35.0%
ACTACAATAATGTGCTCAAG+GGG - Chr3:76116384-76116403 MsG0380015871.01.T01:intron 35.0%
ACTCCCATTATCACCAATTA+GGG - Chr3:76115716-76115735 MsG0380015871.01.T01:CDS 35.0%
AGAGAAGCTAAGTAGTTAGA+GGG - Chr3:76117231-76117250 MsG0380015871.01.T01:intron 35.0%
AGATACTGAACTTAGTAGGT+GGG - Chr3:76115907-76115926 MsG0380015871.01.T01:intron 35.0%
AGATTATTCAGAATCTCAGC+AGG - Chr3:76118303-76118322 MsG0380015871.01.T01:intron 35.0%
AGCTACTTCATCTTCCAATT+GGG + Chr3:76116488-76116507 None:intergenic 35.0%
AGTCAATTTGGGAGATTGAA+GGG + Chr3:76118750-76118769 None:intergenic 35.0%
CAATGGGTGATATTTCATTG+AGG - Chr3:76116017-76116036 MsG0380015871.01.T01:intron 35.0%
CATCAAACATAAAAAAGGGG+GGG - Chr3:76117956-76117975 MsG0380015871.01.T01:intron 35.0%
CATTATCACCAATTAGGGTT+AGG - Chr3:76115721-76115740 MsG0380015871.01.T01:CDS 35.0%
CGATTCATACTAAACTAGTG+AGG + Chr3:76116445-76116464 None:intergenic 35.0%
GAAAACAATTCTGGGTAAAC+TGG + Chr3:76117197-76117216 None:intergenic 35.0%
GAACTCAAAAAATGTACTGG+AGG - Chr3:76118505-76118524 MsG0380015871.01.T01:intron 35.0%
GAATCAGCGAAGTAAAAGAA+TGG - Chr3:76115513-76115532 MsG0380015871.01.T01:intron 35.0%
GAGATTTGGGAATTGGAAAT+TGG - Chr3:76117677-76117696 MsG0380015871.01.T01:intron 35.0%
GAGCAATTACTTGAATGTGA+TGG - Chr3:76116534-76116553 MsG0380015871.01.T01:intron 35.0%
GATATTTCATTGAGGAAGAC+CGG - Chr3:76116025-76116044 MsG0380015871.01.T01:intron 35.0%
GATGTTAGATAAAAGGCTGT+AGG - Chr3:76116700-76116719 MsG0380015871.01.T01:intron 35.0%
GGAGGGTCATGTATATATAT+AGG - Chr3:76117252-76117271 MsG0380015871.01.T01:intron 35.0%
GGATAAATTTGGATGGAAGA+AGG - Chr3:76117273-76117292 MsG0380015871.01.T01:intron 35.0%
GTCTATCTTATAAATGGGAG+AGG + Chr3:76117509-76117528 None:intergenic 35.0%
GTGGAAGAAATTGAAGAATC+TGG - Chr3:76118424-76118443 MsG0380015871.01.T01:intron 35.0%
TAAGGAAATGTTGTTCAGTG+GGG - Chr3:76117774-76117793 MsG0380015871.01.T01:intron 35.0%
TAGAGAAGCTAAGTAGTTAG+AGG - Chr3:76117230-76117249 MsG0380015871.01.T01:intron 35.0%
TATTTCGTAGCATGCAGATT+TGG + Chr3:76118102-76118121 None:intergenic 35.0%
TCAAAAAATGTACTGGAGGA+GGG - Chr3:76118509-76118528 MsG0380015871.01.T01:intron 35.0%
TTATCCTGTACCCATTAAAC+TGG - Chr3:76116780-76116799 MsG0380015871.01.T01:intron 35.0%
TTCCATGAGATTCTATACTG+TGG + Chr3:76118332-76118351 None:intergenic 35.0%
TTCTCTACAAATGACAGGTT+CGG - Chr3:76118627-76118646 MsG0380015871.01.T01:CDS 35.0%
TTGTTAGGGTAAAGGAATGA+GGG - Chr3:76117154-76117173 MsG0380015871.01.T01:intron 35.0%
! AAAACCAGTTTAATGGGTAC+AGG + Chr3:76116787-76116806 None:intergenic 35.0%
! ACTTCTTAGAGTATCAAGGA+TGG + Chr3:76118990-76119009 None:intergenic 35.0%
! CTAACCCTAATTGGTGATAA+TGG + Chr3:76115723-76115742 None:intergenic 35.0%
! CTGTAATTTTTGTCGGATGA+TGG - Chr3:76116997-76117016 MsG0380015871.01.T01:intron 35.0%
! CTTCTTAGAGTATCAAGGAT+GGG + Chr3:76118989-76119008 None:intergenic 35.0%
! GGTAACTTCTTAGAGTATCA+AGG + Chr3:76118994-76119013 None:intergenic 35.0%
!! GGAGTAGGTGTTATTCAATT+TGG - Chr3:76116624-76116643 MsG0380015871.01.T01:intron 35.0%
!! TTTAGCTTTCTTGTGGCAAT+GGG - Chr3:76116001-76116020 MsG0380015871.01.T01:intron 35.0%
!!! AGAGAGTCAGTTTTTTTTGG+TGG + Chr3:76118670-76118689 None:intergenic 35.0%
!!! CAAAGCACATTTTTTGGGTT+TGG - Chr3:76119259-76119278 MsG0380015871.01.T01:five_prime_UTR 35.0%
!!! TTTTAGCTTTCTTGTGGCAA+TGG - Chr3:76116000-76116019 MsG0380015871.01.T01:intron 35.0%
AAAACCCTATGGCTAATCTC+TGG + Chr3:76118920-76118939 None:intergenic 40.0%
AAACCCTATGGCTAATCTCT+GGG + Chr3:76118919-76118938 None:intergenic 40.0%
AAATTGGGGAGTAAACATGC+AGG - Chr3:76118198-76118217 MsG0380015871.01.T01:CDS 40.0%
AAGCAGCTCTTCTAAATGAG+GGG - Chr3:76119212-76119231 MsG0380015871.01.T01:CDS 40.0%
AAGCTAAGTAGTTAGAGGGA+GGG - Chr3:76117235-76117254 MsG0380015871.01.T01:intron 40.0%
AAGGAAATGTTGTTCAGTGG+GGG - Chr3:76117775-76117794 MsG0380015871.01.T01:intron 40.0%
AAGTTACCAAGATTTGCCTC+CGG - Chr3:76119006-76119025 MsG0380015871.01.T01:intron 40.0%
ACAAAAGCCCAGAAGTTTCT+TGG - Chr3:76117556-76117575 MsG0380015871.01.T01:intron 40.0%
ACAATTCTGGGTAAACTGGT+TGG + Chr3:76117193-76117212 None:intergenic 40.0%
ACCAATTAGGGTTAGGGTTA+AGG - Chr3:76115728-76115747 MsG0380015871.01.T01:CDS 40.0%
ACCTTAACCCTAACCCTAAT+TGG + Chr3:76115732-76115751 None:intergenic 40.0%
ACCTTGGGATCTATATTCTG+CGG + Chr3:76115687-76115706 None:intergenic 40.0%
ACTTGTATCATGCAAGACTG+TGG - Chr3:76116931-76116950 MsG0380015871.01.T01:intron 40.0%
AGCCAATCTTGAGCAAATGT+AGG + Chr3:76117842-76117861 None:intergenic 40.0%
ATACTAGAAAGGCTATTGCG+AGG - Chr3:76116101-76116120 MsG0380015871.01.T01:intron 40.0%
ATCTATATTCTGCGGCTTTG+AGG + Chr3:76115679-76115698 None:intergenic 40.0%
CAAAAGCCCAGAAGTTTCTT+GGG - Chr3:76117557-76117576 MsG0380015871.01.T01:intron 40.0%
CAAGCAGCTCTTCTAAATGA+GGG - Chr3:76119211-76119230 MsG0380015871.01.T01:CDS 40.0%
CACTCCCATTATCACCAATT+AGG - Chr3:76115715-76115734 MsG0380015871.01.T01:CDS 40.0%
CTACAATAATGTGCTCAAGG+GGG - Chr3:76116385-76116404 MsG0380015871.01.T01:intron 40.0%
CTCAAAAAATGTACTGGAGG+AGG - Chr3:76118508-76118527 MsG0380015871.01.T01:intron 40.0%
CTTATAAATGGGAGAGGAAC+AGG + Chr3:76117503-76117522 None:intergenic 40.0%
GAAAAGGGCTAAAGTGCATA+AGG - Chr3:76116057-76116076 MsG0380015871.01.T01:intron 40.0%
GAAATTGAAGAATCTGGGAG+AGG - Chr3:76118430-76118449 MsG0380015871.01.T01:intron 40.0%
GAGAAAAAGGAAGGAGAAAG+TGG - Chr3:76118405-76118424 MsG0380015871.01.T01:intron 40.0%
GAGATACTGAACTTAGTAGG+TGG - Chr3:76115906-76115925 MsG0380015871.01.T01:intron 40.0%
GAGCTACTTCATCTTCCAAT+TGG + Chr3:76116489-76116508 None:intergenic 40.0%
GAGTCAATTTGGGAGATTGA+AGG + Chr3:76118751-76118770 None:intergenic 40.0%
GATTATCCAGGATAAAGCTC+TGG - Chr3:76119121-76119140 MsG0380015871.01.T01:CDS 40.0%
GGGAGTGATTATCTTACCTT+GGG + Chr3:76115702-76115721 None:intergenic 40.0%
GGGGAACTCAAAAAATGTAC+TGG - Chr3:76118502-76118521 MsG0380015871.01.T01:intron 40.0%
GTCAATTTGGGAGATTGAAG+GGG + Chr3:76118749-76118768 None:intergenic 40.0%
GTTGTTAGGGTAAAGGAATG+AGG - Chr3:76117153-76117172 MsG0380015871.01.T01:intron 40.0%
TCCTGGATAATCCAAACACA+CGG + Chr3:76119113-76119132 None:intergenic 40.0%
TCTCTACAAATGACAGGTTC+GGG - Chr3:76118628-76118647 MsG0380015871.01.T01:CDS 40.0%
TGAATTGACGATTCCCTTCA+TGG - Chr3:76117128-76117147 MsG0380015871.01.T01:intron 40.0%
TGCAAGGATTAGAGAGATTC+TGG - Chr3:76115793-76115812 MsG0380015871.01.T01:CDS 40.0%
TGCAGAATTGACTGTTACCA+TGG - Chr3:76117450-76117469 MsG0380015871.01.T01:intron 40.0%
TGGGAGTGATTATCTTACCT+TGG + Chr3:76115703-76115722 None:intergenic 40.0%
TGTGTATTCGAATTCGGGAA+CGG + Chr3:76115570-76115589 None:intergenic 40.0%
TTAGGGTTAGGGTTAAGGTT+TGG - Chr3:76115733-76115752 MsG0380015871.01.T01:CDS 40.0%
TTGATTCTCGAAGTCTGGAT+CGG + Chr3:76115454-76115473 None:intergenic 40.0%
! AATAACATTTGCTGCAGACG+AGG - Chr3:76118873-76118892 MsG0380015871.01.T01:CDS 40.0%
! AGAGAGATTCTGGAGAATGT+AGG - Chr3:76115803-76115822 MsG0380015871.01.T01:CDS 40.0%
! CTTTAGAGAGAGTAACGAGA+TGG + Chr3:76115616-76115635 None:intergenic 40.0%
! GATTCTGGAGAATGTAGGTT+TGG - Chr3:76115808-76115827 MsG0380015871.01.T01:CDS 40.0%
! GATTTTGCATTGTAGCTGCA+AGG - Chr3:76115777-76115796 MsG0380015871.01.T01:CDS 40.0%
! GTGGTTGGAATTTTGTTAGC+CGG + Chr3:76115427-76115446 None:intergenic 40.0%
! TTACATTTTGCCCGTGTGTT+TGG - Chr3:76119099-76119118 MsG0380015871.01.T01:CDS 40.0%
! TTGATAACTCAAACCCCCTA+CGG - Chr3:76118477-76118496 MsG0380015871.01.T01:intron 40.0%
!! ACCATGGTTATCGATTTGAC+AGG - Chr3:76117466-76117485 MsG0380015871.01.T01:intron 40.0%
!! AGAGATTAGCCATAGGGTTT+TGG - Chr3:76118919-76118938 MsG0380015871.01.T01:intron 40.0%
!! CCATGGTTATCGATTTGACA+GGG - Chr3:76117467-76117486 MsG0380015871.01.T01:intron 40.0%
!! TTGGTGGTTCAGTTGATGAA+TGG - Chr3:76119339-76119358 MsG0380015871.01.T01:five_prime_UTR 40.0%
!!! GAGTCAGTTTTTTTTGGTGG+TGG + Chr3:76118667-76118686 None:intergenic 40.0%
AACCCTATGGCTAATCTCTG+GGG + Chr3:76118918-76118937 None:intergenic 45.0%
AATTTGGGAGATTGAAGGGG+AGG + Chr3:76118746-76118765 None:intergenic 45.0%
ACACTGCCCAAGAAACTTCT+GGG + Chr3:76117566-76117585 None:intergenic 45.0%
ACCCTAACAACCTCCATGAA+GGG + Chr3:76117144-76117163 None:intergenic 45.0%
AGATCGATCGATCTGTGATG+TGG + Chr3:76115366-76115385 None:intergenic 45.0%
AGGAAATGTTGTTCAGTGGG+GGG - Chr3:76117776-76117795 MsG0380015871.01.T01:intron 45.0%
AGGAGGGGATTAGAGGAAAA+GGG + Chr3:76118714-76118733 None:intergenic 45.0%
ATTGAAGAATCTGGGAGAGG+AGG - Chr3:76118433-76118452 MsG0380015871.01.T01:intron 45.0%
ATTGACGATTCCCTTCATGG+AGG - Chr3:76117131-76117150 MsG0380015871.01.T01:intron 45.0%
ATTTGGGAGATTGAAGGGGA+GGG + Chr3:76118745-76118764 None:intergenic 45.0%
CATGGAGGTTGTTAGGGTAA+AGG - Chr3:76117146-76117165 MsG0380015871.01.T01:intron 45.0%
CATTACGCCTCACCTTTGAT+TGG - Chr3:76118259-76118278 MsG0380015871.01.T01:intron 45.0%
CCATGTCAACCAAAACCCTA+TGG + Chr3:76118931-76118950 None:intergenic 45.0%
CCCTGTCAAATCGATAACCA+TGG + Chr3:76117470-76117489 None:intergenic 45.0%
CCTGGATAATCCAAACACAC+GGG + Chr3:76119112-76119131 None:intergenic 45.0%
CGTGGTGTGTATTCGAATTC+GGG + Chr3:76115575-76115594 None:intergenic 45.0%
CTCTACAAATGACAGGTTCG+GGG - Chr3:76118629-76118648 MsG0380015871.01.T01:CDS 45.0%
GAAATACCGGAGGCAAATCT+TGG + Chr3:76119015-76119034 None:intergenic 45.0%
GAAGCTAAGTAGTTAGAGGG+AGG - Chr3:76117234-76117253 MsG0380015871.01.T01:intron 45.0%
GAGGGTTTGGAGAAAAAGGA+AGG - Chr3:76118396-76118415 MsG0380015871.01.T01:intron 45.0%
GCAACAATGTGCCAACTATG+AGG - Chr3:76116579-76116598 MsG0380015871.01.T01:intron 45.0%
GCAAGCAGCTCTTCTAAATG+AGG - Chr3:76119210-76119229 MsG0380015871.01.T01:CDS 45.0%
GCGTGGTGTGTATTCGAATT+CGG + Chr3:76115576-76115595 None:intergenic 45.0%
GGAGACTGATGCTTCTTGAT+CGG + Chr3:76115480-76115499 None:intergenic 45.0%
GTGGTAGATACACTGCAATG+TGG - Chr3:76116950-76116969 MsG0380015871.01.T01:intron 45.0%
GTGTATTCGAATTCGGGAAC+GGG + Chr3:76115569-76115588 None:intergenic 45.0%
TAACACATGTGGGGTGATGT+GGG + Chr3:76117728-76117747 None:intergenic 45.0%
TACCCTAACAACCTCCATGA+AGG + Chr3:76117145-76117164 None:intergenic 45.0%
TATTTAGCGACGGTGGTGAT+TGG + Chr3:76115395-76115414 None:intergenic 45.0%
TCAGTCTCCACAGAAGTTTC+TGG - Chr3:76115491-76115510 MsG0380015871.01.T01:intron 45.0%
TCCAAAACCTTCGAAGTTGC+AGG - Chr3:76115539-76115558 MsG0380015871.01.T01:intron 45.0%
TCCCTTCATGGAGGTTGTTA+GGG - Chr3:76117140-76117159 MsG0380015871.01.T01:intron 45.0%
TTCCCTTCATGGAGGTTGTT+AGG - Chr3:76117139-76117158 MsG0380015871.01.T01:intron 45.0%
TTGAAGAATCTGGGAGAGGA+GGG - Chr3:76118434-76118453 MsG0380015871.01.T01:intron 45.0%
TTGAGAGCGACGCGAAAAAT+GGG - Chr3:76116666-76116685 MsG0380015871.01.T01:intron 45.0%
TTTGAGAGCGACGCGAAAAA+TGG - Chr3:76116665-76116684 MsG0380015871.01.T01:intron 45.0%
! AATGTACTGGAGGAGGGTTT+TGG - Chr3:76118515-76118534 MsG0380015871.01.T01:intron 45.0%
! ACCTGCAACTTCGAAGGTTT+TGG + Chr3:76115543-76115562 None:intergenic 45.0%
! ATACCCCAGAGATTAGCCAT+AGG - Chr3:76118912-76118931 MsG0380015871.01.T01:CDS 45.0%
! ATGTACTGGAGGAGGGTTTT+GGG - Chr3:76118516-76118535 MsG0380015871.01.T01:intron 45.0%
! GCTGATTCCAGAAACTTCTG+TGG + Chr3:76115501-76115520 None:intergenic 45.0%
! TACCCCAGAGATTAGCCATA+GGG - Chr3:76118913-76118932 MsG0380015871.01.T01:CDS 45.0%
! TGGAATTTTGTTAGCCGGCA+CGG + Chr3:76115422-76115441 None:intergenic 45.0%
!! GGACATTGATTCTCGAAGTC+TGG + Chr3:76115459-76115478 None:intergenic 45.0%
!!! AGTTTTTTTTGGTGGTGGCC+GGG + Chr3:76118662-76118681 None:intergenic 45.0%
!!! ATTTGTTTTGAGGGGGGAGT+AGG - Chr3:76116609-76116628 MsG0380015871.01.T01:intron 45.0%
!!! CAGTTTTTTTTGGTGGTGGC+CGG + Chr3:76118663-76118682 None:intergenic 45.0%
!!! CCATAGGGTTTTGGTTGACA+TGG - Chr3:76118928-76118947 MsG0380015871.01.T01:intron 45.0%
!!! TTTTGAGTTCCCCTACCGTA+GGG + Chr3:76118495-76118514 None:intergenic 45.0%
!!! TTTTTGAGTTCCCCTACCGT+AGG + Chr3:76118496-76118515 None:intergenic 45.0%
AACTCAAACCCCCTACGGTA+GGG - Chr3:76118482-76118501 MsG0380015871.01.T01:intron 50.0%
AGATGAAGTAGCTCCGTGTG+AGG - Chr3:76116495-76116514 MsG0380015871.01.T01:intron 50.0%
AGGGGAGGGTTTGGAGAAAA+AGG - Chr3:76118392-76118411 MsG0380015871.01.T01:intron 50.0%
CCCGTGTGTTTGGATTATCC+AGG - Chr3:76119109-76119128 MsG0380015871.01.T01:CDS 50.0%
CTTTCCATCTGAGCCTCACA+CGG + Chr3:76116511-76116530 None:intergenic 50.0%
GACACTGCCCAAGAAACTTC+TGG + Chr3:76117567-76117586 None:intergenic 50.0%
GAGGAGGGGATTAGAGGAAA+AGG + Chr3:76118715-76118734 None:intergenic 50.0%
GCACGGTGGTTATTTAGCGA+CGG + Chr3:76115405-76115424 None:intergenic 50.0%
GCCGCAGAATATAGATCCCA+AGG - Chr3:76115683-76115702 MsG0380015871.01.T01:intron 50.0%
GGAGAGTTTACCGTCCAATG+TGG - Chr3:76115835-76115854 MsG0380015871.01.T01:intron 50.0%
GGGTTTACCTGCAACTTCGA+AGG + Chr3:76115549-76115568 None:intergenic 50.0%
GTAACACATGTGGGGTGATG+TGG + Chr3:76117729-76117748 None:intergenic 50.0%
GTGAGGCTCAGATGGAAAGT+TGG - Chr3:76116512-76116531 MsG0380015871.01.T01:intron 50.0%
GTGCAGAACACTAGCCCAAT+TGG - Chr3:76116471-76116490 MsG0380015871.01.T01:intron 50.0%
TAACTCAAACCCCCTACGGT+AGG - Chr3:76118481-76118500 MsG0380015871.01.T01:intron 50.0%
TAGGCAGCAGTATACAAGCC+TGG + Chr3:76119306-76119325 None:intergenic 50.0%
TCGATCGATCTGTGATGTGG+TGG + Chr3:76115363-76115382 None:intergenic 50.0%
TCGATCTGTGATGTGGTGGT+TGG + Chr3:76115359-76115378 None:intergenic 50.0%
TCGCTAAATAACCACCGTGC+CGG - Chr3:76115405-76115424 MsG0380015871.01.T01:CDS 50.0%
TGACATGGCTGAGCATAGGA+AGG - Chr3:76118943-76118962 MsG0380015871.01.T01:intron 50.0%
TGGTTGACATGGCTGAGCAT+AGG - Chr3:76118939-76118958 MsG0380015871.01.T01:intron 50.0%
TTAGGGTCTGTTCGGGAGAT+TGG - Chr3:76118364-76118383 MsG0380015871.01.T01:intron 50.0%
TTCAAGACGCTTCTCAGCAG+CGG + Chr3:76119182-76119201 None:intergenic 50.0%
TTCATTGAGGAAGACCGGTG+TGG - Chr3:76116030-76116049 MsG0380015871.01.T01:intron 50.0%
TTTGGGAGATTGAAGGGGAG+GGG + Chr3:76118744-76118763 None:intergenic 50.0%
! AATTTTGTTAGCCGGCACGG+TGG + Chr3:76115419-76115438 None:intergenic 50.0%
! GGAGAATGTAGGTTTGGCTC+AGG - Chr3:76115814-76115833 MsG0380015871.01.T01:CDS 50.0%
! TTTGAGTTCCCCTACCGTAG+GGG + Chr3:76118494-76118513 None:intergenic 50.0%
!!! GTTTTTTTTGGTGGTGGCCG+GGG + Chr3:76118661-76118680 None:intergenic 50.0%
ACAGGAGAGGAGGGGATTAG+AGG + Chr3:76118721-76118740 None:intergenic 55.0%
ACCGTCCAATGTGGTTGCGT+CGG - Chr3:76115844-76115863 MsG0380015871.01.T01:intron 55.0%
ACTCAAACCCCCTACGGTAG+GGG - Chr3:76118483-76118502 MsG0380015871.01.T01:intron 55.0%
AGACCGGTGTGGAGGAGAAA+AGG - Chr3:76116041-76116060 MsG0380015871.01.T01:intron 55.0%
AGCATAGGAAGGAGCTGGAG+AGG - Chr3:76118954-76118973 MsG0380015871.01.T01:intron 55.0%
ATCTGGGAGAGGAGGGCTTT+AGG - Chr3:76118441-76118460 MsG0380015871.01.T01:intron 55.0%
ATTGAGGAAGACCGGTGTGG+AGG - Chr3:76116033-76116052 MsG0380015871.01.T01:intron 55.0%
CGGTGGTTATTTAGCGACGG+TGG + Chr3:76115402-76115421 None:intergenic 55.0%
GACCGGTGTGGAGGAGAAAA+GGG - Chr3:76116042-76116061 MsG0380015871.01.T01:intron 55.0%
GCGACGGTGGTGATTGGAAA+TGG + Chr3:76115389-76115408 None:intergenic 55.0%
GGTCTGTTCGGGAGATTGGA+GGG - Chr3:76118368-76118387 MsG0380015871.01.T01:intron 55.0%
GTCTGTTCGGGAGATTGGAG+GGG - Chr3:76118369-76118388 MsG0380015871.01.T01:intron 55.0%
TCTCGAAGTCTGGATCGGAG+AGG + Chr3:76115449-76115468 None:intergenic 55.0%
TCTGGGAGAGGAGGGCTTTA+GGG - Chr3:76118442-76118461 MsG0380015871.01.T01:intron 55.0%
TGCAAGTGAGAGACACTGCG+TGG + Chr3:76115593-76115612 None:intergenic 55.0%
TGTTCAGTGGGGGGATTGCA+AGG - Chr3:76117785-76117804 MsG0380015871.01.T01:intron 55.0%
TTGAGTTCCCCTACCGTAGG+GGG + Chr3:76118493-76118512 None:intergenic 55.0%
! AGCCCTTTTCTCCTCCACAC+CGG + Chr3:76116047-76116066 None:intergenic 55.0%
! AGGCAGCCAGAGCTTTATCC+TGG + Chr3:76119130-76119149 None:intergenic 55.0%
! CAAGGGGGACAGAGAGCTTT+TGG - Chr3:76116400-76116419 MsG0380015871.01.T01:intron 55.0%
!! TCTCTGGGGTATAGCCCACA+CGG + Chr3:76118904-76118923 None:intergenic 55.0%
!!! TACTGGAGGAGGGTTTTGGG+AGG - Chr3:76118519-76118538 MsG0380015871.01.T01:intron 55.0%
AGCTCCGTGTGAGGCTCAGA+TGG - Chr3:76116504-76116523 MsG0380015871.01.T01:intron 60.0%
ATCACGAGCGACGAGACGAG+CGG + Chr3:76115651-76115670 None:intergenic 60.0%
CAGACGAGGCTCAACCGTGT+GGG - Chr3:76118887-76118906 MsG0380015871.01.T01:CDS 60.0%
CGAAGTCTGGATCGGAGAGG+TGG + Chr3:76115446-76115465 None:intergenic 60.0%
GAGACGAGCGGCTTCGTCTT+TGG + Chr3:76115639-76115658 None:intergenic 60.0%
GAGATTGAAGGGGAGGGGAC+AGG + Chr3:76118739-76118758 None:intergenic 60.0%
GCCGACGCAACCACATTGGA+CGG + Chr3:76115848-76115867 None:intergenic 60.0%
GGCTGAGCATAGGAAGGAGC+TGG - Chr3:76118949-76118968 MsG0380015871.01.T01:intron 60.0%
GGGTCTGTTCGGGAGATTGG+AGG - Chr3:76118367-76118386 MsG0380015871.01.T01:intron 60.0%
GTCTGGATCGGAGAGGTGGT+TGG + Chr3:76115442-76115461 None:intergenic 60.0%
GTTCGGGAGATTGGAGGGGA+GGG - Chr3:76118373-76118392 MsG0380015871.01.T01:intron 60.0%
TGTTCGGGAGATTGGAGGGG+AGG - Chr3:76118372-76118391 MsG0380015871.01.T01:intron 60.0%
TTCGGGAGATTGGAGGGGAG+GGG - Chr3:76118374-76118393 MsG0380015871.01.T01:intron 60.0%
! CTGGGAGAGGAGGGCTTTAG+GGG - Chr3:76118443-76118462 MsG0380015871.01.T01:intron 60.0%
CAGGTTCGGGGTTCGAACCC+CGG - Chr3:76118641-76118660 MsG0380015871.01.T01:CDS 65.0%
GCAGACGAGGCTCAACCGTG+TGG - Chr3:76118886-76118905 MsG0380015871.01.T01:CDS 65.0%
GGAGATTGGAGGGGAGGGGA+GGG - Chr3:76118378-76118397 MsG0380015871.01.T01:intron 65.0%
TGAAGGGGAGGGGACAGGAG+AGG + Chr3:76118734-76118753 None:intergenic 65.0%
TTGGAGGGGAGGGGAGGGTT+TGG - Chr3:76118383-76118402 MsG0380015871.01.T01:intron 65.0%
! CAATGTGGTTGCGTCGGCGC+AGG - Chr3:76115850-76115869 MsG0380015871.01.T01:intron 65.0%
! CTGCGCCGACGCAACCACAT+TGG + Chr3:76115852-76115871 None:intergenic 65.0%
AGGGGAGGGGACAGGAGAGG+AGG + Chr3:76118731-76118750 None:intergenic 70.0%
GGGAGATTGGAGGGGAGGGG+AGG - Chr3:76118377-76118396 MsG0380015871.01.T01:intron 70.0%
GGGAGGGGACAGGAGAGGAG+GGG + Chr3:76118729-76118748 None:intergenic 70.0%
GGGGAGGGGACAGGAGAGGA+GGG + Chr3:76118730-76118749 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 76115352 76119377 76115352 ID=MsG0380015871.01;Name=MsG0380015871.01
Chr3 mRNA 76115352 76119377 76115352 ID=MsG0380015871.01.T01;Parent=MsG0380015871.01;Name=MsG0380015871.01.T01;_AED=0.46;_eAED=0.46;_QI=121|0.83|0.71|1|1|1|7|0|297
Chr3 exon 76115352 76115440 76115352 ID=MsG0380015871.01.T01:exon:1272;Parent=MsG0380015871.01.T01
Chr3 exon 76115556 76115598 76115556 ID=MsG0380015871.01.T01:exon:1271;Parent=MsG0380015871.01.T01
Chr3 exon 76115702 76115839 76115702 ID=MsG0380015871.01.T01:exon:1270;Parent=MsG0380015871.01.T01
Chr3 exon 76118129 76118252 76118129 ID=MsG0380015871.01.T01:exon:1269;Parent=MsG0380015871.01.T01
Chr3 exon 76118589 76118723 76118589 ID=MsG0380015871.01.T01:exon:1268;Parent=MsG0380015871.01.T01
Chr3 exon 76118805 76118937 76118805 ID=MsG0380015871.01.T01:exon:1267;Parent=MsG0380015871.01.T01
Chr3 exon 76119025 76119377 76119025 ID=MsG0380015871.01.T01:exon:1266;Parent=MsG0380015871.01.T01
Chr3 five_prime_UTR 76119257 76119377 76119257 ID=MsG0380015871.01.T01:five_prime_utr;Parent=MsG0380015871.01.T01
Chr3 CDS 76119025 76119256 76119025 ID=MsG0380015871.01.T01:cds;Parent=MsG0380015871.01.T01
Chr3 CDS 76118805 76118937 76118805 ID=MsG0380015871.01.T01:cds;Parent=MsG0380015871.01.T01
Chr3 CDS 76118589 76118723 76118589 ID=MsG0380015871.01.T01:cds;Parent=MsG0380015871.01.T01
Chr3 CDS 76118129 76118252 76118129 ID=MsG0380015871.01.T01:cds;Parent=MsG0380015871.01.T01
Chr3 CDS 76115702 76115839 76115702 ID=MsG0380015871.01.T01:cds;Parent=MsG0380015871.01.T01
Chr3 CDS 76115556 76115598 76115556 ID=MsG0380015871.01.T01:cds;Parent=MsG0380015871.01.T01
Chr3 CDS 76115352 76115440 76115352 ID=MsG0380015871.01.T01:cds;Parent=MsG0380015871.01.T01
Gene Sequence

>MsG0380015871.01.T01

ATGTCCGATCAAGAAGCATCAGTCTCCACAGAAGTTTCTGGAATCAGCGAAGTAAAAGAATGGCTATCCAAAACCTTCGAAGTTGCAGGTAAACCCGTTCCCGAATTCGAATACACACCACGCAGTGTCTCTCACTTGCACCATCTCGTTACTCTCTCTAAAGCCAAAGACGAAGCCGCTCGTCTCGTCGCTCGTGATTTTCGCCTCAAAGCCGCAGAATATAGATCCCAAGCTGCAAGGATTAGAGAGATTCTGGAGAATGTAGGTTTGGCTCAGGAGAGTTTACCGTCCAATGTGGTTGCGTCGGCGCAGGTTCTAGCAAATGTTGCTAATTTGTTGAATATAAGAGATACTGAACTTAGTAGCTTTCTTGTGGCAATGGGTGATATTTCATTGAGGAAGACCGGTGTGGAGGAGAAAAGGGCTAAAGTGCATAAGGAGTCGAAGTTTCTTCTCGATTATACTAGAAAGGCTATTGCGAGGTTAACATATTTGAAAAGAACACTAGCCCAATTGGAAGATGAAGTAGCTCCGTGTGAGGCTCAGATGGAAAGTTGGAGCAATTACTTGAATGTGATGGCTCAAAAAGAAAGACAGTACGTGCAACAATGTGCCAACTATGAGACGAGGCTCAACCGTGTGGGCTATACCCCAGAGATTAGCCATAGGGTTTTGGTTGACATGGCTGAGCATAGGAAGGAGCTGGAGAGGCAAACTAAGCCCATCCTTGATACTCTAAGAAGTTACCAAGATTTGCCTCCGGATAAAGCTCTGGCTGCCTTAGCAATTGAAGATAAAAAAGGCAATTCTGTTTTCAAACCAGGCTTGTATACTGCTGCCTACAACAATGATATATTGGTGGTTCAGTTGATGAATGGATTCAAAGACAGTTGA

Protein sequence

>MsG0380015871.01.T01

MSDQEASVSTEVSGISEVKEWLSKTFEVAGKPVPEFEYTPRSVSHLHHLVTLSKAKDEAARLVARDFRLKAAEYRSQAARIREILENVGLAQESLPSNVVASAQVLANVANLLNIRDTELSSFLVAMGDISLRKTGVEEKRAKVHKESKFLLDYTRKAIARLTYLKRTLAQLEDEVAPCEAQMESWSNYLNVMAQKERQYVQQCANYETRLNRVGYTPEISHRVLVDMAEHRKELERQTKPILDTLRSYQDLPPDKALAALAIEDKKGNSVFKPGLYTAAYNNDILVVQLMNGFKDS*