Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026460.01.T01 | XP_003614081.1 | 95.05 | 101 | 5 | 0 | 1 | 101 | 1 | 101 | 6.45E-65 | 207 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026460.01.T01 | Q9FZ86 | 56.19 | 105 | 42 | 2 | 1 | 102 | 1 | 104 | 4.51E-36 | 124 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026460.01.T01 | G7JWW4 | 95.050 | 101 | 5 | 0 | 1 | 101 | 1 | 101 | 3.08e-65 | 207 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000114.01 | MsG0580026460.01 | 0.814581 | 1.432195e-51 | 9.647174e-49 |
MsG0180000400.01 | MsG0580026460.01 | -0.804146 | 2.485287e-49 | 1.271834e-46 |
MsG0180001315.01 | MsG0580026460.01 | 0.803638 | 3.168009e-49 | 1.600220e-46 |
MsG0180004252.01 | MsG0580026460.01 | 0.807668 | 4.516461e-50 | 2.530633e-47 |
MsG0180006243.01 | MsG0580026460.01 | 0.819286 | 1.258119e-52 | 9.640107e-50 |
MsG0280010976.01 | MsG0580026460.01 | 0.807075 | 6.033584e-50 | 3.328937e-47 |
MsG0280011413.01 | MsG0580026460.01 | 0.802026 | 6.820428e-49 | 3.306049e-46 |
MsG0480018479.01 | MsG0580026460.01 | 0.834202 | 3.434616e-56 | 4.046862e-53 |
MsG0480019167.01 | MsG0580026460.01 | 0.849476 | 3.155673e-60 | 5.989149e-57 |
MsG0480022552.01 | MsG0580026460.01 | 0.807975 | 3.886146e-50 | 2.195077e-47 |
MsG0580024727.01 | MsG0580026460.01 | 0.805127 | 1.551094e-49 | 8.140900e-47 |
MsG0580025903.01 | MsG0580026460.01 | 0.807852 | 4.127824e-50 | 2.323968e-47 |
MsG0380016005.01 | MsG0580026460.01 | 0.804007 | 2.656103e-49 | 1.354434e-46 |
MsG0380017401.01 | MsG0580026460.01 | 0.847671 | 9.976804e-60 | 1.786671e-56 |
MsG0580026460.01 | MsG0680034235.01 | 0.808371 | 3.200522e-50 | 1.826840e-47 |
MsG0580026460.01 | MsG0780040254.01 | 0.800903 | 1.158273e-48 | 5.457584e-46 |
MsG0580026460.01 | MsG0780041482.01 | 0.857222 | 1.891125e-62 | 4.633852e-59 |
MsG0580026460.01 | MsG0880042206.01 | 0.832237 | 1.059815e-55 | 1.177468e-52 |
MsG0580026460.01 | MsG0880046535.01 | 0.844410 | 7.689966e-59 | 1.240359e-55 |
MsG0580026460.01 | MsG0880046684.01 | 0.811219 | 7.811689e-51 | 4.807584e-48 |
MsG0580026460.01 | MsG0880046901.01 | 0.822190 | 2.704974e-53 | 2.247910e-50 |
MsG0280007496.01 | MsG0580026460.01 | 0.816317 | 5.885651e-52 | 4.156899e-49 |
MsG0280007992.01 | MsG0580026460.01 | 0.806836 | 6.778645e-50 | 3.717131e-47 |
MsG0280008738.01 | MsG0580026460.01 | 0.850375 | 1.768323e-60 | 3.456682e-57 |
MsG0280009054.01 | MsG0580026460.01 | 0.818816 | 1.608674e-52 | 1.216758e-49 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026460.01.T01 | MTR_5g044530 | 95.050 | 101 | 5 | 0 | 1 | 101 | 1 | 101 | 7.81e-69 | 207 |
MsG0580026460.01.T01 | MTR_4g083070 | 76.768 | 99 | 22 | 1 | 1 | 99 | 1 | 98 | 3.69e-52 | 163 |
MsG0580026460.01.T01 | MTR_4g109490 | 56.322 | 87 | 37 | 1 | 13 | 99 | 15 | 100 | 1.92e-28 | 103 |
MsG0580026460.01.T01 | MTR_8g085390 | 45.361 | 97 | 53 | 0 | 3 | 99 | 11 | 107 | 8.04e-25 | 93.2 |
MsG0580026460.01.T01 | MTR_4g132280 | 42.553 | 94 | 50 | 2 | 13 | 102 | 373 | 466 | 1.22e-23 | 94.7 |
MsG0580026460.01.T01 | MTR_5g097420 | 40.367 | 109 | 61 | 2 | 1 | 105 | 9 | 117 | 2.84e-23 | 87.4 |
MsG0580026460.01.T01 | MTR_1g084820 | 49.383 | 81 | 40 | 1 | 19 | 99 | 417 | 496 | 2.07e-22 | 91.3 |
MsG0580026460.01.T01 | MTR_1g084820 | 49.383 | 81 | 40 | 1 | 19 | 99 | 417 | 496 | 2.99e-22 | 90.9 |
MsG0580026460.01.T01 | MTR_3g082080 | 54.167 | 72 | 33 | 0 | 20 | 91 | 155 | 226 | 2.07e-21 | 85.9 |
MsG0580026460.01.T01 | MTR_8g085400 | 40.196 | 102 | 58 | 1 | 1 | 102 | 12 | 110 | 3.47e-21 | 82.0 |
MsG0580026460.01.T01 | MTR_1g116870 | 44.828 | 87 | 45 | 1 | 19 | 102 | 273 | 359 | 6.73e-21 | 86.3 |
MsG0580026460.01.T01 | MTR_8g089400 | 42.529 | 87 | 49 | 1 | 14 | 99 | 49 | 135 | 1.13e-19 | 79.7 |
MsG0580026460.01.T01 | MTR_8g089400 | 42.529 | 87 | 49 | 1 | 14 | 99 | 29 | 115 | 1.66e-19 | 79.0 |
MsG0580026460.01.T01 | MTR_4g133735 | 41.053 | 95 | 53 | 2 | 8 | 99 | 12 | 106 | 2.01e-19 | 77.4 |
MsG0580026460.01.T01 | MTR_4g133730 | 37.755 | 98 | 60 | 1 | 3 | 99 | 9 | 106 | 3.57e-19 | 77.0 |
MsG0580026460.01.T01 | MTR_8g085440 | 38.000 | 100 | 61 | 1 | 1 | 99 | 10 | 109 | 8.05e-19 | 75.9 |
MsG0580026460.01.T01 | MTR_1g022160 | 45.455 | 88 | 48 | 0 | 14 | 101 | 383 | 470 | 1.33e-18 | 80.1 |
MsG0580026460.01.T01 | MTR_2g049670 | 40.816 | 98 | 54 | 2 | 22 | 116 | 158 | 254 | 1.50e-18 | 79.3 |
MsG0580026460.01.T01 | MTR_1g022160 | 42.000 | 100 | 57 | 1 | 14 | 113 | 383 | 481 | 2.05e-18 | 79.7 |
MsG0580026460.01.T01 | MTR_3g065460 | 39.000 | 100 | 53 | 2 | 8 | 99 | 340 | 439 | 2.95e-18 | 79.3 |
MsG0580026460.01.T01 | MTR_1g022160 | 44.828 | 87 | 48 | 0 | 14 | 100 | 383 | 469 | 4.71e-18 | 78.6 |
MsG0580026460.01.T01 | MTR_1g056640 | 47.297 | 74 | 38 | 1 | 19 | 91 | 403 | 476 | 5.74e-18 | 78.6 |
MsG0580026460.01.T01 | MTR_3g083580 | 39.286 | 84 | 50 | 1 | 17 | 99 | 357 | 440 | 6.60e-18 | 78.2 |
MsG0580026460.01.T01 | MTR_8g085420 | 37.000 | 100 | 62 | 1 | 1 | 99 | 10 | 109 | 6.86e-18 | 74.3 |
MsG0580026460.01.T01 | MTR_5g078200 | 36.364 | 88 | 55 | 1 | 13 | 99 | 351 | 438 | 2.55e-17 | 76.6 |
MsG0580026460.01.T01 | MTR_5g078200 | 36.364 | 88 | 55 | 1 | 13 | 99 | 318 | 405 | 3.22e-17 | 76.3 |
MsG0580026460.01.T01 | MTR_4g079530 | 43.011 | 93 | 49 | 2 | 21 | 109 | 36 | 128 | 4.43e-17 | 73.2 |
MsG0580026460.01.T01 | MTR_8g085720 | 43.678 | 87 | 47 | 2 | 14 | 99 | 357 | 442 | 4.77e-17 | 75.9 |
MsG0580026460.01.T01 | MTR_5g015720 | 50.685 | 73 | 34 | 2 | 21 | 91 | 328 | 400 | 8.21e-17 | 75.1 |
MsG0580026460.01.T01 | MTR_7g111600 | 44.706 | 85 | 45 | 2 | 22 | 105 | 160 | 243 | 1.10e-16 | 74.3 |
MsG0580026460.01.T01 | MTR_4g083500 | 39.286 | 84 | 48 | 1 | 22 | 102 | 402 | 485 | 1.18e-16 | 74.7 |
MsG0580026460.01.T01 | MTR_7g111600 | 44.706 | 85 | 45 | 2 | 22 | 105 | 160 | 243 | 1.31e-16 | 73.9 |
MsG0580026460.01.T01 | MTR_7g111600 | 44.706 | 85 | 45 | 2 | 22 | 105 | 160 | 243 | 1.54e-16 | 73.2 |
MsG0580026460.01.T01 | MTR_4g079530 | 45.000 | 80 | 43 | 1 | 21 | 99 | 36 | 115 | 1.61e-16 | 70.5 |
MsG0580026460.01.T01 | MTR_3g048280 | 40.000 | 90 | 52 | 2 | 17 | 105 | 107 | 195 | 2.83e-16 | 71.6 |
MsG0580026460.01.T01 | MTR_3g116510 | 44.048 | 84 | 47 | 0 | 18 | 101 | 367 | 450 | 3.58e-16 | 73.2 |
MsG0580026460.01.T01 | MTR_3g116510 | 44.048 | 84 | 47 | 0 | 18 | 101 | 233 | 316 | 3.86e-16 | 72.8 |
MsG0580026460.01.T01 | MTR_5g085580 | 44.737 | 76 | 41 | 1 | 17 | 91 | 377 | 452 | 1.22e-15 | 72.0 |
MsG0580026460.01.T01 | MTR_1g031900 | 37.975 | 79 | 48 | 1 | 22 | 99 | 361 | 439 | 1.34e-15 | 71.6 |
MsG0580026460.01.T01 | MTR_1g031900 | 37.975 | 79 | 48 | 1 | 22 | 99 | 361 | 439 | 2.09e-15 | 71.2 |
MsG0580026460.01.T01 | MTR_4g069940 | 44.444 | 81 | 44 | 1 | 22 | 101 | 375 | 455 | 3.12e-15 | 70.9 |
MsG0580026460.01.T01 | MTR_6g088885 | 38.043 | 92 | 55 | 1 | 17 | 106 | 364 | 455 | 3.19e-15 | 70.9 |
MsG0580026460.01.T01 | MTR_8g102340 | 35.165 | 91 | 58 | 1 | 17 | 106 | 329 | 419 | 3.75e-15 | 70.5 |
MsG0580026460.01.T01 | MTR_5g091650 | 42.857 | 84 | 46 | 2 | 17 | 99 | 103 | 185 | 7.93e-15 | 68.6 |
MsG0580026460.01.T01 | MTR_5g091650 | 42.857 | 84 | 46 | 2 | 17 | 99 | 103 | 185 | 8.90e-15 | 67.4 |
MsG0580026460.01.T01 | MTR_8g088120 | 42.647 | 68 | 37 | 2 | 33 | 99 | 59 | 125 | 4.87e-11 | 57.8 |
MsG0580026460.01.T01 | MTR_8g012400 | 31.707 | 82 | 55 | 1 | 19 | 99 | 371 | 452 | 8.06e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026460.01.T01 | AT1G18650 | 56.190 | 105 | 42 | 2 | 1 | 102 | 1 | 104 | 8.56e-38 | 124 |
MsG0580026460.01.T01 | AT1G18650 | 56.190 | 105 | 42 | 2 | 1 | 102 | 1 | 104 | 4.60e-37 | 124 |
MsG0580026460.01.T01 | AT1G69295 | 57.282 | 103 | 42 | 2 | 1 | 103 | 1 | 101 | 2.15e-35 | 121 |
MsG0580026460.01.T01 | AT1G69295 | 58.252 | 103 | 37 | 3 | 1 | 103 | 1 | 97 | 1.03e-33 | 117 |
MsG0580026460.01.T01 | AT2G03505 | 58.140 | 86 | 35 | 1 | 14 | 99 | 14 | 98 | 5.62e-32 | 109 |
MsG0580026460.01.T01 | AT2G03505 | 58.140 | 86 | 35 | 1 | 14 | 99 | 14 | 98 | 3.14e-31 | 109 |
MsG0580026460.01.T01 | AT2G03505 | 58.140 | 86 | 35 | 1 | 14 | 99 | 14 | 98 | 3.14e-31 | 109 |
MsG0580026460.01.T01 | AT2G03505 | 58.140 | 86 | 35 | 1 | 14 | 99 | 14 | 98 | 3.14e-31 | 109 |
MsG0580026460.01.T01 | AT1G13830 | 58.025 | 81 | 34 | 0 | 19 | 99 | 32 | 112 | 9.93e-31 | 108 |
MsG0580026460.01.T01 | AT1G13830 | 57.500 | 80 | 34 | 0 | 20 | 99 | 19 | 98 | 5.84e-30 | 106 |
MsG0580026460.01.T01 | AT5G61130 | 52.941 | 85 | 39 | 1 | 15 | 99 | 15 | 98 | 3.76e-27 | 99.8 |
MsG0580026460.01.T01 | AT1G26450 | 56.180 | 89 | 36 | 3 | 3 | 91 | 4 | 89 | 9.51e-27 | 98.6 |
MsG0580026460.01.T01 | AT5G08000 | 51.765 | 85 | 41 | 0 | 3 | 87 | 21 | 105 | 5.63e-26 | 97.1 |
MsG0580026460.01.T01 | AT5G08000 | 56.000 | 75 | 32 | 1 | 13 | 87 | 13 | 86 | 6.73e-25 | 93.6 |
MsG0580026460.01.T01 | AT1G11820 | 43.617 | 94 | 52 | 1 | 13 | 105 | 372 | 465 | 7.24e-24 | 95.1 |
MsG0580026460.01.T01 | AT1G11820 | 44.318 | 88 | 48 | 1 | 13 | 99 | 372 | 459 | 7.24e-24 | 95.1 |
MsG0580026460.01.T01 | AT4G13600 | 51.250 | 80 | 39 | 0 | 20 | 99 | 59 | 138 | 2.89e-23 | 90.5 |
MsG0580026460.01.T01 | AT2G05790 | 45.263 | 95 | 44 | 3 | 12 | 102 | 378 | 468 | 1.62e-21 | 88.6 |
MsG0580026460.01.T01 | AT1G79480 | 48.611 | 72 | 37 | 0 | 18 | 89 | 307 | 378 | 2.50e-20 | 84.7 |
MsG0580026460.01.T01 | AT1G79480 | 48.611 | 72 | 37 | 0 | 18 | 89 | 306 | 377 | 2.58e-20 | 84.7 |
MsG0580026460.01.T01 | AT5G55180 | 41.463 | 82 | 47 | 1 | 19 | 99 | 369 | 450 | 2.15e-18 | 79.7 |
MsG0580026460.01.T01 | AT2G01630 | 38.636 | 88 | 53 | 1 | 13 | 99 | 351 | 438 | 4.11e-18 | 79.0 |
MsG0580026460.01.T01 | AT5G35740 | 39.362 | 94 | 55 | 2 | 8 | 99 | 16 | 109 | 4.82e-18 | 73.9 |
MsG0580026460.01.T01 | AT4G34480 | 42.045 | 88 | 51 | 0 | 14 | 101 | 356 | 443 | 5.24e-18 | 78.6 |
MsG0580026460.01.T01 | AT4G34480 | 42.045 | 88 | 51 | 0 | 14 | 101 | 245 | 332 | 5.71e-18 | 78.2 |
MsG0580026460.01.T01 | AT4G26830 | 42.045 | 88 | 47 | 2 | 19 | 102 | 368 | 455 | 5.78e-18 | 78.6 |
MsG0580026460.01.T01 | AT4G26830 | 42.045 | 88 | 47 | 2 | 19 | 102 | 364 | 451 | 5.92e-18 | 78.6 |
MsG0580026460.01.T01 | AT3G55430 | 41.096 | 73 | 43 | 0 | 17 | 89 | 361 | 433 | 6.53e-18 | 78.2 |
MsG0580026460.01.T01 | AT2G01630 | 39.362 | 94 | 53 | 2 | 13 | 102 | 351 | 444 | 6.60e-18 | 78.6 |
MsG0580026460.01.T01 | AT1G66250 | 36.170 | 94 | 56 | 2 | 13 | 102 | 359 | 452 | 1.19e-17 | 77.8 |
MsG0580026460.01.T01 | AT4G05430 | 37.931 | 87 | 53 | 1 | 14 | 99 | 15 | 101 | 1.20e-17 | 73.6 |
MsG0580026460.01.T01 | AT5G67460 | 41.975 | 81 | 46 | 1 | 20 | 99 | 291 | 371 | 1.23e-17 | 77.4 |
MsG0580026460.01.T01 | AT5G67460 | 41.379 | 87 | 47 | 2 | 20 | 102 | 291 | 377 | 1.35e-17 | 77.0 |
MsG0580026460.01.T01 | AT1G29380 | 47.059 | 85 | 40 | 3 | 22 | 102 | 148 | 231 | 1.85e-17 | 76.3 |
MsG0580026460.01.T01 | AT4G05430 | 37.931 | 87 | 53 | 1 | 14 | 99 | 40 | 126 | 1.88e-17 | 73.9 |
MsG0580026460.01.T01 | AT1G29380 | 48.101 | 79 | 39 | 2 | 22 | 99 | 148 | 225 | 2.05e-17 | 75.1 |
MsG0580026460.01.T01 | AT1G29380 | 48.101 | 79 | 39 | 2 | 22 | 99 | 148 | 225 | 2.05e-17 | 75.1 |
MsG0580026460.01.T01 | AT1G29380 | 46.512 | 86 | 41 | 3 | 22 | 103 | 148 | 232 | 2.12e-17 | 75.5 |
MsG0580026460.01.T01 | AT5G24318 | 40.000 | 85 | 51 | 0 | 17 | 101 | 367 | 451 | 2.21e-17 | 77.0 |
MsG0580026460.01.T01 | AT4G05430 | 37.931 | 87 | 53 | 1 | 14 | 99 | 40 | 126 | 2.24e-17 | 72.8 |
MsG0580026460.01.T01 | AT2G04910 | 37.363 | 91 | 56 | 1 | 10 | 99 | 3 | 93 | 4.74e-17 | 71.6 |
MsG0580026460.01.T01 | AT5G63240 | 31.667 | 120 | 68 | 2 | 1 | 106 | 8 | 127 | 4.75e-17 | 71.6 |
MsG0580026460.01.T01 | AT2G04910 | 37.363 | 91 | 56 | 1 | 10 | 99 | 3 | 93 | 6.14e-17 | 70.9 |
MsG0580026460.01.T01 | AT5G24318 | 39.759 | 83 | 50 | 0 | 17 | 99 | 367 | 449 | 1.12e-16 | 74.7 |
MsG0580026460.01.T01 | AT1G09460 | 46.341 | 82 | 42 | 2 | 18 | 99 | 133 | 212 | 1.27e-16 | 74.3 |
MsG0580026460.01.T01 | AT2G30933 | 42.353 | 85 | 44 | 3 | 22 | 102 | 82 | 165 | 1.97e-16 | 72.4 |
MsG0580026460.01.T01 | AT2G30933 | 41.176 | 85 | 48 | 2 | 16 | 99 | 76 | 159 | 2.19e-16 | 70.9 |
MsG0580026460.01.T01 | AT2G30933 | 41.176 | 85 | 48 | 2 | 16 | 99 | 76 | 159 | 2.19e-16 | 70.9 |
MsG0580026460.01.T01 | AT3G58100 | 42.500 | 80 | 45 | 1 | 21 | 99 | 40 | 119 | 2.97e-16 | 70.9 |
MsG0580026460.01.T01 | AT5G55180 | 41.975 | 81 | 46 | 1 | 19 | 98 | 369 | 449 | 5.12e-16 | 72.8 |
MsG0580026460.01.T01 | AT3G58100 | 42.500 | 80 | 45 | 1 | 21 | 99 | 116 | 195 | 5.23e-16 | 71.6 |
MsG0580026460.01.T01 | AT5G63250 | 36.364 | 88 | 53 | 1 | 22 | 106 | 42 | 129 | 1.33e-15 | 68.2 |
MsG0580026460.01.T01 | AT5G24318 | 39.759 | 83 | 50 | 0 | 17 | 99 | 228 | 310 | 1.58e-15 | 71.2 |
MsG0580026460.01.T01 | AT5G63230 | 41.791 | 67 | 39 | 0 | 22 | 88 | 26 | 92 | 1.63e-15 | 67.4 |
MsG0580026460.01.T01 | AT5G63225 | 42.424 | 66 | 38 | 0 | 22 | 87 | 25 | 90 | 1.91e-15 | 67.0 |
MsG0580026460.01.T01 | AT2G16230 | 41.026 | 78 | 46 | 0 | 22 | 99 | 366 | 443 | 3.40e-15 | 70.5 |
MsG0580026460.01.T01 | AT4G09462 | 31.313 | 99 | 68 | 0 | 1 | 99 | 8 | 106 | 3.66e-15 | 66.6 |
MsG0580026460.01.T01 | AT3G13560 | 39.506 | 81 | 48 | 1 | 20 | 99 | 360 | 440 | 4.55e-15 | 70.5 |
MsG0580026460.01.T01 | AT3G13560 | 39.506 | 81 | 48 | 1 | 20 | 99 | 360 | 440 | 4.55e-15 | 70.5 |
MsG0580026460.01.T01 | AT3G13560 | 39.506 | 81 | 48 | 1 | 20 | 99 | 360 | 440 | 4.55e-15 | 70.5 |
MsG0580026460.01.T01 | AT3G13560 | 39.506 | 81 | 48 | 1 | 20 | 99 | 360 | 440 | 4.55e-15 | 70.5 |
MsG0580026460.01.T01 | AT3G13560 | 39.506 | 81 | 48 | 1 | 20 | 99 | 360 | 440 | 4.55e-15 | 70.5 |
MsG0580026460.01.T01 | AT5G56590 | 37.975 | 79 | 48 | 1 | 22 | 99 | 369 | 447 | 2.54e-14 | 68.2 |
MsG0580026460.01.T01 | AT4G29360 | 35.443 | 79 | 50 | 1 | 22 | 99 | 401 | 479 | 4.87e-14 | 67.4 |
MsG0580026460.01.T01 | AT4G29360 | 35.443 | 79 | 50 | 1 | 22 | 99 | 391 | 469 | 5.26e-14 | 67.4 |
MsG0580026460.01.T01 | AT4G09465 | 32.530 | 83 | 56 | 0 | 17 | 99 | 26 | 108 | 8.54e-14 | 63.2 |
MsG0580026460.01.T01 | AT4G09467 | 32.530 | 83 | 56 | 0 | 17 | 99 | 26 | 108 | 1.30e-13 | 62.8 |
MsG0580026460.01.T01 | AT4G09464 | 32.530 | 83 | 56 | 0 | 17 | 99 | 26 | 108 | 1.30e-13 | 62.8 |
MsG0580026460.01.T01 | AT1G66855 | 31.633 | 98 | 62 | 2 | 7 | 99 | 7 | 104 | 2.28e-13 | 62.0 |
MsG0580026460.01.T01 | AT4G09090 | 32.967 | 91 | 56 | 1 | 2 | 87 | 6 | 96 | 2.73e-13 | 61.6 |
MsG0580026460.01.T01 | AT4G09466 | 28.571 | 91 | 65 | 0 | 9 | 99 | 18 | 108 | 2.85e-13 | 61.6 |
MsG0580026460.01.T01 | AT1G66870 | 29.000 | 100 | 70 | 1 | 1 | 99 | 5 | 104 | 3.58e-13 | 61.2 |
MsG0580026460.01.T01 | AT1G66852 | 32.222 | 90 | 59 | 2 | 1 | 89 | 5 | 93 | 8.09e-13 | 60.5 |
MsG0580026460.01.T01 | AT1G66870 | 31.765 | 85 | 57 | 1 | 16 | 99 | 47 | 131 | 9.03e-13 | 60.8 |
MsG0580026460.01.T01 | AT2G39640 | 34.524 | 84 | 55 | 0 | 17 | 100 | 455 | 538 | 1.05e-12 | 63.5 |
MsG0580026460.01.T01 | AT2G39640 | 37.975 | 79 | 49 | 0 | 22 | 100 | 359 | 437 | 3.98e-11 | 58.9 |
MsG0580026460.01.T01 | AT4G16165 | 32.653 | 98 | 61 | 2 | 7 | 99 | 7 | 104 | 1.23e-12 | 60.1 |
MsG0580026460.01.T01 | AT2G29735 | 34.848 | 66 | 43 | 0 | 22 | 87 | 31 | 96 | 5.10e-11 | 55.8 |
Find 32 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAATAGCTATTTCCAGAAAA+AGG | 0.162295 | 5:+37867852 | MsG0580026460.01.T01:CDS |
GAAATCTATTTGATGAAAAT+TGG | 0.183068 | 5:-37867305 | None:intergenic |
CAGTGATCTTTAATAGTATT+TGG | 0.214822 | 5:-37867817 | None:intergenic |
TAACTTCATGTATGCTTAAA+AGG | 0.230401 | 5:-37867059 | None:intergenic |
TGTACACAAATTCAGCAAAA+TGG | 0.240176 | 5:+37867781 | MsG0580026460.01.T01:CDS |
CAAGTTGGTGGAGTTGAACT+TGG | 0.386998 | 5:-37867916 | None:intergenic |
ATCATAATTATTATTAATCA+TGG | 0.397515 | 5:+37867340 | MsG0580026460.01.T01:exon |
GTGCTCTTCCTTTCACTGAC+TGG | 0.399657 | 5:+37867380 | MsG0580026460.01.T01:CDS |
CTTAAAAGGTGAGAGTGATC+TGG | 0.417813 | 5:-37867045 | None:intergenic |
ATAGATTATGCTTGTGGTGC+TGG | 0.423350 | 5:+37867751 | MsG0580026460.01.T01:CDS |
GTACACAAATTCAGCAAAAT+GGG | 0.441669 | 5:+37867782 | MsG0580026460.01.T01:CDS |
CTTTATTGTGTGTGTAAAGA+TGG | 0.447451 | 5:+37867700 | MsG0580026460.01.T01:CDS |
CAAGAAACATACCCACTTGA+AGG | 0.473768 | 5:-37868059 | None:intergenic |
CAGAAGGGTACTTTAATATG+TGG | 0.494337 | 5:-37867274 | None:intergenic |
TTAAAAGGTGAGAGTGATCT+GGG | 0.497858 | 5:-37867044 | None:intergenic |
AGAGACAGTAGCTAGGAGAA+TGG | 0.505124 | 5:-37867220 | None:intergenic |
GTTTCTTGAACATCATCTAG+TGG | 0.523559 | 5:+37868074 | MsG0580026460.01.T01:CDS |
AAAATTGGATCAAGTTCAGA+AGG | 0.524604 | 5:-37867290 | None:intergenic |
AATAGAGCTAACTTACAAGT+TGG | 0.537719 | 5:-37867931 | None:intergenic |
TTGAATATCCAGTCAGTGAA+AGG | 0.544399 | 5:-37867388 | None:intergenic |
AGAGCTAACTTACAAGTTGG+TGG | 0.546087 | 5:-37867928 | None:intergenic |
CATGTGTTTATCCTTCAAGT+GGG | 0.546392 | 5:+37868048 | MsG0580026460.01.T01:CDS |
ATAGTATTTGGCTGAAAACA+TGG | 0.547340 | 5:-37867805 | None:intergenic |
AAAAGAGAGAGACAGTAGCT+AGG | 0.547420 | 5:-37867227 | None:intergenic |
TTGTGTGTGTAAAGATGGTG+TGG | 0.548656 | 5:+37867705 | MsG0580026460.01.T01:CDS |
TCATGTGTTTATCCTTCAAG+TGG | 0.556606 | 5:+37868047 | MsG0580026460.01.T01:CDS |
AAAGCAATAGATTATGCTTG+TGG | 0.562210 | 5:+37867745 | MsG0580026460.01.T01:CDS |
TTTCTGGAATAGAGAAAGTG+GGG | 0.565723 | 5:-37867193 | None:intergenic |
TGGAATAGAGAAAGTGGGGA+AGG | 0.575492 | 5:-37867189 | None:intergenic |
TGTGTGTGTAAAGATGGTGT+GGG | 0.677024 | 5:+37867706 | MsG0580026460.01.T01:CDS |
AAATTGGATCAAGTTCAGAA+GGG | 0.695511 | 5:-37867289 | None:intergenic |
TAAAAGGTGAGAGTGATCTG+GGG | 0.753650 | 5:-37867043 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCATAATTATTATTAATCA+TGG | + | Chr5:37867340-37867359 | MsG0580026460.01.T01:exon | 10.0% |
!! | AATAAGTCAAAAAAAATTCA+AGG | - | Chr5:37867966-37867985 | None:intergenic | 15.0% |
!!! | TAATAAATAAACTCATCTTT+TGG | - | Chr5:37867632-37867651 | None:intergenic | 15.0% |
!! | AAAAGTAAGATATGAAAAAG+TGG | - | Chr5:37867484-37867503 | None:intergenic | 20.0% |
!! | GAAATCTATTTGATGAAAAT+TGG | - | Chr5:37867308-37867327 | None:intergenic | 20.0% |
!! | TTCAAGTAAGTAACTAAATT+TGG | + | Chr5:37867406-37867425 | MsG0580026460.01.T01:intron | 20.0% |
! | CAGTGATCTTTAATAGTATT+TGG | - | Chr5:37867820-37867839 | None:intergenic | 25.0% |
! | GTAGAAAAAGAAGAAGAAAA+GGG | - | Chr5:37867565-37867584 | None:intergenic | 25.0% |
! | TAACTTCATGTATGCTTAAA+AGG | - | Chr5:37867062-37867081 | None:intergenic | 25.0% |
! | TAGAACTAAAAAGGTTGTTT+AGG | - | Chr5:37867456-37867475 | None:intergenic | 25.0% |
! | TGTAGAAAAAGAAGAAGAAA+AGG | - | Chr5:37867566-37867585 | None:intergenic | 25.0% |
!! | AATAGCTATTTCCAGAAAAA+GGG | + | Chr5:37867853-37867872 | MsG0580026460.01.T01:CDS | 25.0% |
!! | TAATAGCTATTTCCAGAAAA+AGG | + | Chr5:37867852-37867871 | MsG0580026460.01.T01:CDS | 25.0% |
!!! | GTGGATTTTTAGAACTAAAA+AGG | - | Chr5:37867465-37867484 | None:intergenic | 25.0% |
!!! | TTTGTTTCTGTTTGTTCAAT+AGG | + | Chr5:37867670-37867689 | MsG0580026460.01.T01:intron | 25.0% |
AAAATTGGATCAAGTTCAGA+AGG | - | Chr5:37867293-37867312 | None:intergenic | 30.0% | |
AAAGCAATAGATTATGCTTG+TGG | + | Chr5:37867745-37867764 | MsG0580026460.01.T01:CDS | 30.0% | |
AAATTGGATCAAGTTCAGAA+GGG | - | Chr5:37867292-37867311 | None:intergenic | 30.0% | |
AATAGAGCTAACTTACAAGT+TGG | - | Chr5:37867934-37867953 | None:intergenic | 30.0% | |
ATAGTATTTGGCTGAAAACA+TGG | - | Chr5:37867808-37867827 | None:intergenic | 30.0% | |
ATGTTTCTTGAACATCATCT+AGG | + | Chr5:37868072-37868091 | MsG0580026460.01.T01:CDS | 30.0% | |
CTTTATTGTGTGTGTAAAGA+TGG | + | Chr5:37867700-37867719 | MsG0580026460.01.T01:CDS | 30.0% | |
GTACACAAATTCAGCAAAAT+GGG | + | Chr5:37867782-37867801 | MsG0580026460.01.T01:CDS | 30.0% | |
TGTACACAAATTCAGCAAAA+TGG | + | Chr5:37867781-37867800 | MsG0580026460.01.T01:CDS | 30.0% | |
!!! | ATTTTCTGGAATAGAGAAAG+TGG | - | Chr5:37867198-37867217 | None:intergenic | 30.0% |
!!! | TTTTCTGGAATAGAGAAAGT+GGG | - | Chr5:37867197-37867216 | None:intergenic | 30.0% |
CATGTGTTTATCCTTCAAGT+GGG | + | Chr5:37868048-37868067 | MsG0580026460.01.T01:CDS | 35.0% | |
GTTTCTGTTTGTTCAATAGG+TGG | + | Chr5:37867673-37867692 | MsG0580026460.01.T01:intron | 35.0% | |
TCATGTGTTTATCCTTCAAG+TGG | + | Chr5:37868047-37868066 | MsG0580026460.01.T01:CDS | 35.0% | |
TTAAAAGGTGAGAGTGATCT+GGG | - | Chr5:37867047-37867066 | None:intergenic | 35.0% | |
TTGAATATCCAGTCAGTGAA+AGG | - | Chr5:37867391-37867410 | None:intergenic | 35.0% | |
!! | AGCTTGTGATTTTTCTGGTA+TGG | + | Chr5:37867888-37867907 | MsG0580026460.01.T01:CDS | 35.0% |
!! | CAGAAGGGTACTTTAATATG+TGG | - | Chr5:37867277-37867296 | None:intergenic | 35.0% |
!! | TTTCTGGAATAGAGAAAGTG+GGG | - | Chr5:37867196-37867215 | None:intergenic | 35.0% |
AAAAGAGAGAGACAGTAGCT+AGG | - | Chr5:37867230-37867249 | None:intergenic | 40.0% | |
ATAGATTATGCTTGTGGTGC+TGG | + | Chr5:37867751-37867770 | MsG0580026460.01.T01:CDS | 40.0% | |
CAAGAAACATACCCACTTGA+AGG | - | Chr5:37868062-37868081 | None:intergenic | 40.0% | |
CTTAAAAGGTGAGAGTGATC+TGG | - | Chr5:37867048-37867067 | None:intergenic | 40.0% | |
TAAAAGGTGAGAGTGATCTG+GGG | - | Chr5:37867046-37867065 | None:intergenic | 40.0% | |
TGTGTGTGTAAAGATGGTGT+GGG | + | Chr5:37867706-37867725 | MsG0580026460.01.T01:CDS | 40.0% | |
TTGTGTGTGTAAAGATGGTG+TGG | + | Chr5:37867705-37867724 | MsG0580026460.01.T01:CDS | 40.0% | |
! | AGAGCTAACTTACAAGTTGG+TGG | - | Chr5:37867931-37867950 | None:intergenic | 40.0% |
! | CAAGGAGCTTGTGATTTTTC+TGG | + | Chr5:37867883-37867902 | MsG0580026460.01.T01:CDS | 40.0% |
! | CTAGGAGAATGGAGATTTTC+TGG | - | Chr5:37867212-37867231 | None:intergenic | 40.0% |
AGAGACAGTAGCTAGGAGAA+TGG | - | Chr5:37867223-37867242 | None:intergenic | 45.0% | |
CAGAAAAAGGGTCAAGCTCA+AGG | + | Chr5:37867865-37867884 | MsG0580026460.01.T01:CDS | 45.0% | |
TGGAATAGAGAAAGTGGGGA+AGG | - | Chr5:37867192-37867211 | None:intergenic | 45.0% | |
! | CTTGAGCTTGACCCTTTTTC+TGG | - | Chr5:37867867-37867886 | None:intergenic | 45.0% |
!! | CAAGTTGGTGGAGTTGAACT+TGG | - | Chr5:37867919-37867938 | None:intergenic | 45.0% |
GTGCTCTTCCTTTCACTGAC+TGG | + | Chr5:37867380-37867399 | MsG0580026460.01.T01:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 37867007 | 37868093 | 37867007 | ID=MsG0580026460.01;Name=MsG0580026460.01 |
Chr5 | mRNA | 37867007 | 37868093 | 37867007 | ID=MsG0580026460.01.T01;Parent=MsG0580026460.01;Name=MsG0580026460.01.T01;_AED=0.39;_eAED=0.41;_QI=352|0.5|0.33|1|0|0.33|3|0|119 |
Chr5 | exon | 37867007 | 37867410 | 37867007 | ID=MsG0580026460.01.T01:exon:2967;Parent=MsG0580026460.01.T01 |
Chr5 | exon | 37867692 | 37867941 | 37867692 | ID=MsG0580026460.01.T01:exon:2968;Parent=MsG0580026460.01.T01 |
Chr5 | exon | 37868036 | 37868093 | 37868036 | ID=MsG0580026460.01.T01:exon:2969;Parent=MsG0580026460.01.T01 |
Chr5 | five_prime_UTR | 37867007 | 37867358 | 37867007 | ID=MsG0580026460.01.T01:five_prime_utr;Parent=MsG0580026460.01.T01 |
Chr5 | CDS | 37867359 | 37867410 | 37867359 | ID=MsG0580026460.01.T01:cds;Parent=MsG0580026460.01.T01 |
Chr5 | CDS | 37867692 | 37867941 | 37867692 | ID=MsG0580026460.01.T01:cds;Parent=MsG0580026460.01.T01 |
Chr5 | CDS | 37868036 | 37868093 | 37868036 | ID=MsG0580026460.01.T01:cds;Parent=MsG0580026460.01.T01 |
Gene Sequence |
Protein sequence |