AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025903.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025903.01.T01 MTR_5g036600 95.669 254 10 1 1 254 143 395 0.0 503
MsG0580025903.01.T01 MTR_8g062670 86.220 254 34 1 1 254 143 395 6.69e-163 457
MsG0580025903.01.T01 MTR_8g024310 38.113 265 139 7 1 248 160 416 4.16e-55 183
MsG0580025903.01.T01 MTR_3g088845 29.583 240 161 4 1 235 115 351 1.83e-28 111
MsG0580025903.01.T01 MTR_3g088845 29.583 240 161 4 1 235 203 439 6.45e-28 111
MsG0580025903.01.T01 MTR_3g096390 30.126 239 143 8 9 233 190 418 1.84e-25 104
MsG0580025903.01.T01 MTR_7g118200 42.254 71 38 2 94 161 18 88 2.66e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025903.01.T01 AT1G59900 84.252 254 39 1 1 254 137 389 1.44e-162 456
MsG0580025903.01.T01 AT1G24180 83.071 254 42 1 1 254 141 393 1.20e-159 448
MsG0580025903.01.T01 AT1G59900 84.298 242 37 1 1 242 137 377 2.46e-154 434
MsG0580025903.01.T01 AT1G01090 39.615 260 141 7 1 248 162 417 2.50e-54 181
MsG0580025903.01.T01 AT5G09300 29.185 233 151 4 9 233 144 370 1.06e-28 112
MsG0580025903.01.T01 AT5G09300 29.185 233 151 4 9 233 215 441 3.84e-28 112
MsG0580025903.01.T01 AT1G21400 28.755 233 152 4 9 233 123 349 1.19e-26 106
MsG0580025903.01.T01 AT1G21400 28.755 233 152 4 9 233 123 349 1.19e-26 106
MsG0580025903.01.T01 AT1G21400 28.755 233 152 4 9 233 140 366 1.88e-26 106
MsG0580025903.01.T01 AT1G21400 28.755 233 152 4 9 233 215 441 3.68e-26 106
MsG0580025903.01.T01 AT1G21400 28.755 233 152 4 9 233 267 493 7.28e-26 105
MsG0580025903.01.T01 AT5G34780 28.218 202 131 4 40 233 16 211 4.14e-18 82.8
MsG0580025903.01.T01 AT5G09300 28.082 146 97 4 9 149 215 357 3.64e-12 65.9

Find 74 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCACTAAATTTCCTATTTA+TGG 0.090762 5:+26403908 None:intergenic
TTGGGATCTTCCTGCTATTT+TGG 0.127087 5:-26408189 MsG0580025903.01.T01:CDS
CTTGGTTGCGGTTTGGCTTT+TGG 0.136540 5:-26408311 MsG0580025903.01.T01:CDS
TTTACCAATGTATATGTTAA+AGG 0.192097 5:-26404241 MsG0580025903.01.T01:CDS
CCACCTATTAACCAAGATTA+AGG 0.200836 5:+26403649 None:intergenic
CGCTTAATATTGCCGCTCTT+TGG 0.218503 5:-26408208 MsG0580025903.01.T01:CDS
TCCCCTTAATCTTGGTTAAT+AGG 0.245674 5:-26403652 MsG0580025903.01.T01:three_prime_UTR
TCAAAAGAAACATGAATTCT+TGG 0.262848 5:+26403555 None:intergenic
CGAACACGTGATGAAATTTC+TGG 0.274663 5:-26406292 MsG0580025903.01.T01:CDS
GATCAATATGATGAATAAAA+AGG 0.297546 5:-26403877 MsG0580025903.01.T01:three_prime_UTR
AAGAGAGGTGATTATGTTCC+TGG 0.308473 5:-26407980 MsG0580025903.01.T01:CDS
GCTTAATATTGCCGCTCTTT+GGG 0.328478 5:-26408207 MsG0580025903.01.T01:CDS
TTCTGTCCAGATTCTTGAAA+TGG 0.331887 5:-26406365 MsG0580025903.01.T01:intron
AATGTATATGTTAAAGGATA+TGG 0.343143 5:-26404235 MsG0580025903.01.T01:CDS
TTTGGTGGTCATGGGATTGT+GGG 0.356685 5:-26408347 MsG0580025903.01.T01:CDS
TCTTCTTAATTGCAGGCATT+TGG 0.384663 5:-26403962 MsG0580025903.01.T01:intron
TGTACAACTCCCCTTAATCT+TGG 0.391316 5:-26403660 MsG0580025903.01.T01:three_prime_UTR
GTGAATATCAACAAAACTAA+TGG 0.392317 5:+26403616 None:intergenic
AGAGCTGCTTTGCCATAAAT+AGG 0.398600 5:-26403920 MsG0580025903.01.T01:exon
ACTGTGTTAGATGCACAATT+TGG 0.400685 5:-26403711 MsG0580025903.01.T01:three_prime_UTR
GCCATAAATAGGAAATTTAG+TGG 0.405503 5:-26403909 MsG0580025903.01.T01:exon
AGAGTTGATGGGTGCTCTAA+AGG 0.407872 5:-26408413 MsG0580025903.01.T01:CDS
TGAGTTCTCTCGGCGTATAT+AGG 0.408661 5:-26403822 MsG0580025903.01.T01:three_prime_UTR
GGTTCCACTTGGTTGCGGTT+TGG 0.408912 5:-26408318 MsG0580025903.01.T01:CDS
CACCTATTAACCAAGATTAA+GGG 0.412414 5:+26403650 None:intergenic
GAACTTATGGGGAGAGTTGA+TGG 0.413468 5:-26408425 None:intergenic
GTCTATTGTTTGAGTTCTCT+CGG 0.418499 5:-26403832 MsG0580025903.01.T01:three_prime_UTR
TTGGATGTTCTGCAAATTTG+AGG 0.426261 5:-26403692 MsG0580025903.01.T01:three_prime_UTR
AGATCAGATGGCTGTGGCAT+TGG 0.432454 5:+26404265 None:intergenic
TCATGGGATTGTGGGAGCTC+AGG 0.451597 5:-26408339 MsG0580025903.01.T01:CDS
CAGAAATTTCATCACGTGTT+CGG 0.453388 5:+26406293 None:intergenic
ATTTACCCTTGAATAGCAAT+GGG 0.456975 5:-26403797 MsG0580025903.01.T01:three_prime_UTR
GAGTTGATGGGTGCTCTAAA+GGG 0.460244 5:-26408412 MsG0580025903.01.T01:CDS
TGCAGGCATTTGGTGCTGAC+AGG 0.467028 5:-26403952 MsG0580025903.01.T01:intron
AAGGAGCATGCTTTGAAGAA+TGG 0.476403 5:-26406572 MsG0580025903.01.T01:CDS
TGAAATTTCTGGTGTGAGAC+AGG 0.478998 5:-26406281 MsG0580025903.01.T01:intron
TCTTACCTTTGCTTTAGCAA+TGG 0.486676 5:+26404421 None:intergenic
TTCTCACAAACCAAAATAGC+AGG 0.488752 5:+26408179 None:intergenic
CGTGTTCGGTATGTGCTGCC+AGG 0.493371 5:+26406307 None:intergenic
GCTCAGGTTCCACTTGGTTG+CGG 0.493387 5:-26408323 MsG0580025903.01.T01:CDS
GTGGGAGCTCAGGTTCCACT+TGG 0.508825 5:-26408329 MsG0580025903.01.T01:CDS
TGCTACCGAAAAGGAGCTAA+AGG 0.509520 5:-26406115 MsG0580025903.01.T01:intron
TCATGACATTGCTACCGAAA+AGG 0.511307 5:-26406124 MsG0580025903.01.T01:CDS
TCACCTCTCTTATAATAAGC+AGG 0.519337 5:+26407992 None:intergenic
GGTCACTCTATGTCTGATCC+TGG 0.522420 5:-26406325 MsG0580025903.01.T01:CDS
AATTTACCCTTGAATAGCAA+TGG 0.535767 5:-26403798 MsG0580025903.01.T01:three_prime_UTR
TGATTATGTTCCTGGGTTGA+AGG 0.544389 5:-26407972 MsG0580025903.01.T01:intron
TTGAAACTCACCTTCAACCC+AGG 0.546586 5:+26407962 None:intergenic
ATGGAATGGGAACTGCTGAA+TGG 0.558069 5:-26408030 MsG0580025903.01.T01:CDS
ATAGGAAATTTAGTGGTACC+AGG 0.565121 5:-26403902 MsG0580025903.01.T01:three_prime_UTR
ACAAGCTGTTAAATTTGCAA+AGG 0.567006 5:-26406591 MsG0580025903.01.T01:CDS
ATATCCTTTAACATATACAT+TGG 0.575711 5:+26404237 None:intergenic
AGAGAGGTGATTATGTTCCT+GGG 0.580253 5:-26407979 MsG0580025903.01.T01:CDS
AAAGCCAAACCGCAACCAAG+TGG 0.586508 5:+26408314 None:intergenic
CCTTAATCTTGGTTAATAGG+TGG 0.586903 5:-26403649 MsG0580025903.01.T01:three_prime_UTR
GGGTGCTCTAAAGGGAAAGG+TGG 0.588337 5:-26408404 MsG0580025903.01.T01:CDS
ACCTATTAACCAAGATTAAG+GGG 0.588728 5:+26403651 None:intergenic
ACATTGGTAAATAGATCAGA+TGG 0.589475 5:+26404253 None:intergenic
AGTTTCAATGAAGCACAAGA+TGG 0.599691 5:+26403594 None:intergenic
ATTCATCATATTGATCAACC+TGG 0.603298 5:+26403884 None:intergenic
GATGGGTGCTCTAAAGGGAA+AGG 0.604716 5:-26408407 MsG0580025903.01.T01:CDS
GGTGATGGTGCTGCGAACCA+AGG 0.610956 5:-26408245 MsG0580025903.01.T01:CDS
GTAAATAGATCAGATGGCTG+TGG 0.616326 5:+26404259 None:intergenic
AACTTATGGGGAGAGTTGAT+GGG 0.617648 5:-26408424 None:intergenic
GTGATGGTGCTGCGAACCAA+GGG 0.618770 5:-26408244 MsG0580025903.01.T01:CDS
AGTCCTGCTTATTATAAGAG+AGG 0.633059 5:-26407995 MsG0580025903.01.T01:CDS
TGAAGCCATTGCTAAAGCAA+AGG 0.634784 5:-26404426 MsG0580025903.01.T01:intron
GGTGCTCTAAAGGGAAAGGT+GGG 0.644351 5:-26408403 MsG0580025903.01.T01:CDS
ATGGACACTTACAGATACCA+TGG 0.650767 5:-26406346 MsG0580025903.01.T01:CDS
GATCAGACATAGAGTGACCA+TGG 0.657482 5:+26406329 None:intergenic
TGTTAAAGGATATGGCGTTG+AGG 0.669084 5:-26404227 MsG0580025903.01.T01:intron
AGCAGGAAGATCCCAAAGAG+CGG 0.675016 5:+26408196 None:intergenic
TTACCCTTGAATAGCAATGG+GGG 0.677850 5:-26403795 MsG0580025903.01.T01:three_prime_UTR
TTTACCCTTGAATAGCAATG+GGG 0.681716 5:-26403796 MsG0580025903.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTTAAATTATTAT+CGG + Chr5:26404109-26404128 None:intergenic 0.0%
!! TAATTTAAAGAAACAAATTA+AGG + Chr5:26405424-26405443 None:intergenic 10.0%
!! TTACTTCAAATTTAAATTAA+CGG + Chr5:26407761-26407780 None:intergenic 10.0%
!! AAAAAATTTGAAAACAGTTA+TGG - Chr5:26404510-26404529 MsG0580025903.01.T01:intron 15.0%
!! CCAATAAATTAAACTAAAAT+TGG + Chr5:26406802-26406821 None:intergenic 15.0%
!! TTTCAATATTTCACAATTAA+AGG + Chr5:26405879-26405898 None:intergenic 15.0%
!!! ATGTATTTTAATACTTTTTC+AGG - Chr5:26405295-26405314 MsG0580025903.01.T01:intron 15.0%
!!! ATTTGTATTTTGATAATGAA+GGG - Chr5:26404757-26404776 MsG0580025903.01.T01:intron 15.0%
!!! CCAATTTTAGTTTAATTTAT+TGG - Chr5:26406799-26406818 MsG0580025903.01.T01:intron 15.0%
!!! TAATTTTCTCAAATTATTAG+CGG + Chr5:26406154-26406173 None:intergenic 15.0%
!! AATCTTATTGAAGTAAAAAG+AGG + Chr5:26404925-26404944 None:intergenic 20.0%
!! AATGTATATGTTAAAGGATA+TGG - Chr5:26407702-26407721 MsG0580025903.01.T01:intron 20.0%
!! ATAAACATTTGAATTTGATG+CGG - Chr5:26407421-26407440 MsG0580025903.01.T01:intron 20.0%
!! ATATCCTTTAACATATACAT+TGG + Chr5:26407703-26407722 None:intergenic 20.0%
!! GATCAATATGATGAATAAAA+AGG - Chr5:26408060-26408079 MsG0580025903.01.T01:intron 20.0%
!! GATTCAAAAATAATAGAAAG+AGG + Chr5:26404953-26404972 None:intergenic 20.0%
!! GTAACTAACTGTTAATATTT+GGG + Chr5:26406029-26406048 None:intergenic 20.0%
!! TGTAACTAACTGTTAATATT+TGG + Chr5:26406030-26406049 None:intergenic 20.0%
!! TTTACCAATGTATATGTTAA+AGG - Chr5:26407696-26407715 MsG0580025903.01.T01:intron 20.0%
!!! AAATTAACGGATAATGAATA+GGG + Chr5:26407748-26407767 None:intergenic 20.0%
!!! AATGGTTAATTTTTTTGTTG+AGG - Chr5:26404248-26404267 MsG0580025903.01.T01:CDS 20.0%
!!! ATTAGTGTTGTTTACTAATA+AGG - Chr5:26404356-26404375 MsG0580025903.01.T01:intron 20.0%
!!! ATTTGTTAGTTTAGAAATAC+AGG - Chr5:26406320-26406339 MsG0580025903.01.T01:CDS 20.0%
!!! ATTTTTATAAGAAGGATTCT+GGG - Chr5:26403564-26403583 MsG0580025903.01.T01:three_prime_UTR 20.0%
!!! CATTTGTATTTTGATAATGA+AGG - Chr5:26404756-26404775 MsG0580025903.01.T01:intron 20.0%
!!! CTCAGATTTTGATTAATTTA+TGG - Chr5:26405536-26405555 MsG0580025903.01.T01:intron 20.0%
!!! CTTCATTGAAACTATTTTTT+GGG - Chr5:26408353-26408372 MsG0580025903.01.T01:CDS 20.0%
!!! TAAATTAACGGATAATGAAT+AGG + Chr5:26407749-26407768 None:intergenic 20.0%
!!! TTAGTGTTGTTTACTAATAA+GGG - Chr5:26404357-26404376 MsG0580025903.01.T01:intron 20.0%
!!! TTTGATTTTTTAGATGGAAT+GGG - Chr5:26403894-26403913 MsG0580025903.01.T01:three_prime_UTR 20.0%
!!! TTTGTTAGTTTAGAAATACA+GGG - Chr5:26406321-26406340 MsG0580025903.01.T01:CDS 20.0%
!!! TTTGTTGAATGTTTTTTGTT+TGG - Chr5:26403803-26403822 MsG0580025903.01.T01:three_prime_UTR 20.0%
!!! TTTTACTTCAATAAGATTTG+AGG - Chr5:26404927-26404946 MsG0580025903.01.T01:intron 20.0%
!!! TTTTGATTTTTTAGATGGAA+TGG - Chr5:26403893-26403912 MsG0580025903.01.T01:three_prime_UTR 20.0%
! AAAAAAATAAAAGTCGGTGT+CGG - Chr5:26404119-26404138 MsG0580025903.01.T01:intron 25.0%
! AAAATGAAGTTATGTATGAC+AGG - Chr5:26407782-26407801 MsG0580025903.01.T01:intron 25.0%
! AATGATTAGATTCGTTGAAA+TGG - Chr5:26404230-26404249 MsG0580025903.01.T01:CDS 25.0%
! AATTATGTTACTGTGTATTG+TGG - Chr5:26406751-26406770 MsG0580025903.01.T01:intron 25.0%
! AATTTAGAAATGAAGTGATG+TGG - Chr5:26406919-26406938 MsG0580025903.01.T01:intron 25.0%
! ACCACTAAATTTCCTATTTA+TGG + Chr5:26408032-26408051 None:intergenic 25.0%
! ATAGATGGCATATCTTAAAT+AGG - Chr5:26406268-26406287 MsG0580025903.01.T01:intron 25.0%
! ATATCCTCCAAAAAATTACA+TGG + Chr5:26408187-26408206 None:intergenic 25.0%
! ATCCTTCTTATAAAAATGCA+TGG + Chr5:26403561-26403580 None:intergenic 25.0%
! ATGACATTTGAACTTGTAAA+TGG - Chr5:26404621-26404640 MsG0580025903.01.T01:intron 25.0%
! CAGAAAAAATTACTCACAAT+GGG + Chr5:26405392-26405411 None:intergenic 25.0%
! CGTGAAATACACATAAATAA+TGG + Chr5:26405198-26405217 None:intergenic 25.0%
! GAAAACACATGTATATAGTA+GGG + Chr5:26405255-26405274 None:intergenic 25.0%
! GAATAGAACTAAAATCTCAT+AGG + Chr5:26407311-26407330 None:intergenic 25.0%
! GTGAATATCAACAAAACTAA+TGG + Chr5:26408324-26408343 None:intergenic 25.0%
! TCAAAAAATTACTAGAGTGA+AGG + Chr5:26406639-26406658 None:intergenic 25.0%
! TCAAAAGAAACATGAATTCT+TGG + Chr5:26408385-26408404 None:intergenic 25.0%
! TCAGACAAAATAATCATAAC+AGG + Chr5:26404666-26404685 None:intergenic 25.0%
! TGAAAACACATGTATATAGT+AGG + Chr5:26405256-26405275 None:intergenic 25.0%
! TGCAAGATAAGATAGAAAAT+AGG + Chr5:26407353-26407372 None:intergenic 25.0%
! TTAAAGTTGTTTGAAGAACA+GGG - Chr5:26406073-26406092 MsG0580025903.01.T01:intron 25.0%
! TTACTGACATAAACAACTTA+TGG + Chr5:26404541-26404560 None:intergenic 25.0%
!! CATTTTTATAAGAAGGATTC+TGG - Chr5:26403563-26403582 MsG0580025903.01.T01:three_prime_UTR 25.0%
!! CTTTTTGCCATGTAATTTTT+TGG - Chr5:26408177-26408196 MsG0580025903.01.T01:CDS 25.0%
!! GAATTGGGTTTGATTTAAAA+TGG - Chr5:26403848-26403867 MsG0580025903.01.T01:three_prime_UTR 25.0%
!! TAGTTTATTGTGTAGCTTTT+CGG - Chr5:26404306-26404325 MsG0580025903.01.T01:intron 25.0%
!! TGATTTCCTTTTCTTCTTTT+AGG - Chr5:26407457-26407476 MsG0580025903.01.T01:intron 25.0%
!! TGTTTTCTATTATGATTTCC+AGG - Chr5:26407644-26407663 MsG0580025903.01.T01:intron 25.0%
!! TTCAAATGTCATTTCTGTAT+TGG + Chr5:26404613-26404632 None:intergenic 25.0%
!!! AAGTTTGGTGATTTTAGAAT+TGG - Chr5:26403832-26403851 MsG0580025903.01.T01:three_prime_UTR 25.0%
!!! AATCTCTTGCTTTAAAATTG+AGG - Chr5:26407811-26407830 MsG0580025903.01.T01:intron 25.0%
!!! AGTTTGGTGATTTTAGAATT+GGG - Chr5:26403833-26403852 MsG0580025903.01.T01:three_prime_UTR 25.0%
!!! ATTATTTCTATATGTTCTCC+AGG + Chr5:26404483-26404502 None:intergenic 25.0%
!!! CATTGGTTTTTAAGATTACT+TGG - Chr5:26407906-26407925 MsG0580025903.01.T01:intron 25.0%
!!! GCTTCATTGAAACTATTTTT+TGG - Chr5:26408352-26408371 MsG0580025903.01.T01:CDS 25.0%
!!! GTTAATTTTTTTGTTGAGGA+AGG - Chr5:26404252-26404271 MsG0580025903.01.T01:CDS 25.0%
!!! TAGTTTTACCATTATATCCA+AGG + Chr5:26404873-26404892 None:intergenic 25.0%
!!! TGTAATTTTTTGGAGGATAT+AGG - Chr5:26408187-26408206 MsG0580025903.01.T01:CDS 25.0%
!!! TGTCTTCTATATTTTTCAGA+TGG + Chr5:26407236-26407255 None:intergenic 25.0%
!!! TTAATACTTTTTCAGGTAGA+TGG - Chr5:26405302-26405321 MsG0580025903.01.T01:intron 25.0%
AAAAATTACTAGAGTGAAGG+AGG + Chr5:26406636-26406655 None:intergenic 30.0%
AAAATTACTAGAGTGAAGGA+GGG + Chr5:26406635-26406654 None:intergenic 30.0%
AATTTACCCTTGAATAGCAA+TGG - Chr5:26408139-26408158 MsG0580025903.01.T01:intron 30.0%
ACAAAATGTGGAAATAGCTA+TGG + Chr5:26407200-26407219 None:intergenic 30.0%
ACAAGCTGTTAAATTTGCAA+AGG - Chr5:26405346-26405365 MsG0580025903.01.T01:intron 30.0%
ACATTGGTAAATAGATCAGA+TGG + Chr5:26407687-26407706 None:intergenic 30.0%
ACATTTGAACTTGTAAATGG+AGG - Chr5:26404624-26404643 MsG0580025903.01.T01:intron 30.0%
ACCTATTAACCAAGATTAAG+GGG + Chr5:26408289-26408308 None:intergenic 30.0%
ATGAAGTGATGTGGTTATAA+AGG - Chr5:26406928-26406947 MsG0580025903.01.T01:intron 30.0%
ATGTATATAGTAGGGCATAA+AGG + Chr5:26405247-26405266 None:intergenic 30.0%
ATTCATCATATTGATCAACC+TGG + Chr5:26408056-26408075 None:intergenic 30.0%
ATTTACCCTTGAATAGCAAT+GGG - Chr5:26408140-26408159 MsG0580025903.01.T01:intron 30.0%
CACCTATTAACCAAGATTAA+GGG + Chr5:26408290-26408309 None:intergenic 30.0%
CGTACAAATGATAAATTGAG+AGG + Chr5:26406663-26406682 None:intergenic 30.0%
CTCTTGACTAATATGATTGT+AGG - Chr5:26405750-26405769 MsG0580025903.01.T01:intron 30.0%
CTTAAAGTTGTTTGAAGAAC+AGG - Chr5:26406072-26406091 MsG0580025903.01.T01:intron 30.0%
CTTGTATCGAATATTGACAT+CGG - Chr5:26405050-26405069 MsG0580025903.01.T01:intron 30.0%
GAAATCATAATAGAATGGAC+AGG - Chr5:26406864-26406883 MsG0580025903.01.T01:intron 30.0%
GCAGAAAAAATTACTCACAA+TGG + Chr5:26405393-26405412 None:intergenic 30.0%
GCCATAAATAGGAAATTTAG+TGG - Chr5:26408028-26408047 MsG0580025903.01.T01:CDS 30.0%
GTAAATGGAGGTTATGTATT+GGG - Chr5:26404636-26404655 MsG0580025903.01.T01:intron 30.0%
TAAACTATCATGAAAGCAGA+AGG + Chr5:26404293-26404312 None:intergenic 30.0%
TAAAGCAAAGGTAAGAAACA+TGG - Chr5:26407523-26407542 MsG0580025903.01.T01:intron 30.0%
TAAAGGTGATTGCATCAAAT+TGG - Chr5:26405839-26405858 MsG0580025903.01.T01:intron 30.0%
TAAAGTTGTTTGAAGAACAG+GGG - Chr5:26406074-26406093 MsG0580025903.01.T01:intron 30.0%
TACAAGTTCCTTGGATATAA+TGG - Chr5:26404862-26404881 MsG0580025903.01.T01:intron 30.0%
TATGTGTATTTCACGAGTAA+GGG - Chr5:26405203-26405222 MsG0580025903.01.T01:intron 30.0%
TCAGTAAATAAGCTCGAATA+AGG - Chr5:26404554-26404573 MsG0580025903.01.T01:intron 30.0%
TCATTGCAAATATGCAACAA+TGG + Chr5:26406512-26406531 None:intergenic 30.0%
TGAAGTGATGTGGTTATAAA+GGG - Chr5:26406929-26406948 MsG0580025903.01.T01:intron 30.0%
TGTAAATGGAGGTTATGTAT+TGG - Chr5:26404635-26404654 MsG0580025903.01.T01:intron 30.0%
TTATGTGTATTTCACGAGTA+AGG - Chr5:26405202-26405221 MsG0580025903.01.T01:intron 30.0%
TTCAGTGTAATTACAAGTGT+CGG - Chr5:26406179-26406198 MsG0580025903.01.T01:intron 30.0%
TTGTTTGTCGAAAATTCACT+TGG - Chr5:26406995-26407014 MsG0580025903.01.T01:intron 30.0%
TTTGTTTGGCTGTTAAAGTT+TGG - Chr5:26403817-26403836 MsG0580025903.01.T01:three_prime_UTR 30.0%
! AAAAAATAAAAGTCGGTGTC+GGG - Chr5:26404120-26404139 MsG0580025903.01.T01:intron 30.0%
! CACATTTTGTACCATGAAAT+GGG - Chr5:26407210-26407229 MsG0580025903.01.T01:intron 30.0%
! GTCCATGCATTTTTATAAGA+AGG - Chr5:26403556-26403575 MsG0580025903.01.T01:three_prime_UTR 30.0%
! TCTATTTATGGAGTATCTTC+AGG + Chr5:26405985-26406004 None:intergenic 30.0%
! TTGAGTTGTTGATCAAAACA+GGG + Chr5:26404390-26404409 None:intergenic 30.0%
! TTGGGTTTGATTTAAAATGG+TGG - Chr5:26403851-26403870 MsG0580025903.01.T01:three_prime_UTR 30.0%
! TTTGATGTTTGAGATTCTAC+TGG - Chr5:26407845-26407864 MsG0580025903.01.T01:intron 30.0%
! TTTTACAACACTCTTACTGT+TGG - Chr5:26407944-26407963 MsG0580025903.01.T01:intron 30.0%
!! AGTTTCAAGGTTTTGTGTTT+TGG - Chr5:26403990-26404009 MsG0580025903.01.T01:intron 30.0%
!! CTTTTCTAAGAGTCTGAATT+AGG - Chr5:26404992-26405011 MsG0580025903.01.T01:intron 30.0%
!! GATTATTTTGTCTGATGAGA+GGG - Chr5:26404671-26404690 MsG0580025903.01.T01:intron 30.0%
!! TGATTATTTTGTCTGATGAG+AGG - Chr5:26404670-26404689 MsG0580025903.01.T01:intron 30.0%
!! TTCTGAGATTGTTCATTGTA+TGG - Chr5:26404813-26404832 MsG0580025903.01.T01:intron 30.0%
!! TTTGAGTTGTTGATCAAAAC+AGG + Chr5:26404391-26404410 None:intergenic 30.0%
!!! AGCTTTTTTACTCTCTCAAT+TGG + Chr5:26405784-26405803 None:intergenic 30.0%
!!! ATTTTAGTTGCTGCAATTTG+CGG - Chr5:26408417-26408436 MsG0580025903.01.T01:CDS 30.0%
!!! GGGGTTTTTGATTTTTTAGA+TGG - Chr5:26403888-26403907 MsG0580025903.01.T01:three_prime_UTR 30.0%
!!! TGTGTTTTGGTGTTGATTTT+TGG - Chr5:26404003-26404022 MsG0580025903.01.T01:intron 30.0%
!!! TTTGCCATGTAATTTTTTGG+AGG - Chr5:26408180-26408199 MsG0580025903.01.T01:CDS 30.0%
!!! TTTTGGTGTTGATTTTTGGT+TGG - Chr5:26404007-26404026 MsG0580025903.01.T01:intron 30.0%
AAATAGGAGCAAGTGTAGAA+GGG - Chr5:26406284-26406303 MsG0580025903.01.T01:CDS 35.0%
AAATGCGCTAATTTCAGAAC+TGG - Chr5:26405896-26405915 MsG0580025903.01.T01:intron 35.0%
AACCAAAACAGACCACTTAT+AGG + Chr5:26405154-26405173 None:intergenic 35.0%
AAGCTATGTAGTACACAAGT+AGG + Chr5:26407572-26407591 None:intergenic 35.0%
AAGTGTCCATTTCAAGAATC+TGG + Chr5:26405581-26405600 None:intergenic 35.0%
AATAGCTATGGACAATGCAA+TGG + Chr5:26407188-26407207 None:intergenic 35.0%
AATCTCAGAACTTGTAGCTA+AGG + Chr5:26404803-26404822 None:intergenic 35.0%
AATGGTGCAATATGCAACAA+TGG + Chr5:26406494-26406513 None:intergenic 35.0%
ACTGTGTTAGATGCACAATT+TGG - Chr5:26408226-26408245 MsG0580025903.01.T01:CDS 35.0%
AGAACTACATTGCCTATAAG+TGG - Chr5:26405139-26405158 MsG0580025903.01.T01:intron 35.0%
AGACATAGACACTAACTCAA+TGG - Chr5:26404081-26404100 MsG0580025903.01.T01:intron 35.0%
AGGGGGAAATCATAATAGAA+TGG - Chr5:26406859-26406878 MsG0580025903.01.T01:intron 35.0%
AGTCCTGCTTATTATAAGAG+AGG - Chr5:26403942-26403961 MsG0580025903.01.T01:CDS 35.0%
AGTTTCAATGAAGCACAAGA+TGG + Chr5:26408346-26408365 None:intergenic 35.0%
AGTTTGTGTGTTTGTCATCT+TGG - Chr5:26404199-26404218 MsG0580025903.01.T01:intron 35.0%
ATAGGAAATTTAGTGGTACC+AGG - Chr5:26408035-26408054 MsG0580025903.01.T01:intron 35.0%
ATATTTGCAATGAACCCAAC+AGG - Chr5:26406519-26406538 MsG0580025903.01.T01:intron 35.0%
ATCATAATAGAATGGACAGG+TGG - Chr5:26406867-26406886 MsG0580025903.01.T01:intron 35.0%
ATCCAAGGAACTTGTATCAA+AGG + Chr5:26404858-26404877 None:intergenic 35.0%
ATGGTGCAATATGCAACAAT+GGG + Chr5:26406493-26406512 None:intergenic 35.0%
ATTGAGTTAGTGTCTATGTC+TGG + Chr5:26404082-26404101 None:intergenic 35.0%
CAGAAATTTCATCACGTGTT+CGG + Chr5:26405647-26405666 None:intergenic 35.0%
CAGTGTCCTAAAAGAAGAAA+AGG + Chr5:26407466-26407485 None:intergenic 35.0%
CCACCTATTAACCAAGATTA+AGG + Chr5:26408291-26408310 None:intergenic 35.0%
CCATTTCATGGTACAAAATG+TGG + Chr5:26407212-26407231 None:intergenic 35.0%
CCTTAATCTTGGTTAATAGG+TGG - Chr5:26408288-26408307 MsG0580025903.01.T01:CDS 35.0%
CTAATACAAAGTTCACATGC+TGG + Chr5:26405695-26405714 None:intergenic 35.0%
GCATCAATCTTCTTAATTGC+AGG - Chr5:26407968-26407987 MsG0580025903.01.T01:intron 35.0%
GCTGAAGTACGTTCTATTTA+TGG + Chr5:26405997-26406016 None:intergenic 35.0%
GTGTATCATCTTTAGTCAGT+CGG + Chr5:26407051-26407070 None:intergenic 35.0%
TAAAGGGAAATGGTTAGAAG+AGG - Chr5:26406836-26406855 MsG0580025903.01.T01:intron 35.0%
TAAATAGGAGCAAGTGTAGA+AGG - Chr5:26406283-26406302 MsG0580025903.01.T01:CDS 35.0%
TATAACACTCTATTCTCCTG+AGG + Chr5:26407106-26407125 None:intergenic 35.0%
TATTGAACTAAGAGTCCGTT+TGG + Chr5:26404584-26404603 None:intergenic 35.0%
TCACCTCTCTTATAATAAGC+AGG + Chr5:26403948-26403967 None:intergenic 35.0%
TCCCCTTAATCTTGGTTAAT+AGG - Chr5:26408285-26408304 MsG0580025903.01.T01:CDS 35.0%
TCTCAAATTATTAGCGGTGT+CGG + Chr5:26406148-26406167 None:intergenic 35.0%
TCTTCTTAATTGCAGGCATT+TGG - Chr5:26407975-26407994 MsG0580025903.01.T01:CDS 35.0%
TGGTTATGCATGTCATACTA+TGG - Chr5:26405916-26405935 MsG0580025903.01.T01:intron 35.0%
TTAGTGAGGATAAAGGGAAA+TGG - Chr5:26406826-26406845 MsG0580025903.01.T01:intron 35.0%
TTATGATACAACTCAGTGAC+AGG - Chr5:26407881-26407900 MsG0580025903.01.T01:intron 35.0%
TTCTCACAAACCAAAATAGC+AGG + Chr5:26403761-26403780 None:intergenic 35.0%
TTCTGTCCAGATTCTTGAAA+TGG - Chr5:26405572-26405591 MsG0580025903.01.T01:intron 35.0%
TTGGATGTTCTGCAAATTTG+AGG - Chr5:26408245-26408264 MsG0580025903.01.T01:CDS 35.0%
TTGTCAAGCAAGTAGATGAA+TGG + Chr5:26405476-26405495 None:intergenic 35.0%
TTTACCCTTGAATAGCAATG+GGG - Chr5:26408141-26408160 MsG0580025903.01.T01:intron 35.0%
TTTGAAGGTGAATGTGTGTT+GGG + Chr5:26406414-26406433 None:intergenic 35.0%
! AACTGCGACGTTAATGTTTT+AGG + Chr5:26406352-26406371 None:intergenic 35.0%
! AATTTATTGGCTGCTTAGTG+AGG - Chr5:26406812-26406831 MsG0580025903.01.T01:intron 35.0%
! CCACATTTTGTACCATGAAA+TGG - Chr5:26407209-26407228 MsG0580025903.01.T01:intron 35.0%
! GAATCTGTTTCTTCTCACAA+TGG + Chr5:26407081-26407100 None:intergenic 35.0%
! GTCTATTGTTTGAGTTCTCT+CGG - Chr5:26408105-26408124 MsG0580025903.01.T01:intron 35.0%
! TATTGACATCGGTGTTTATG+TGG - Chr5:26405061-26405080 MsG0580025903.01.T01:intron 35.0%
! TTATTGTGTAGCTTTTCGGT+TGG - Chr5:26404310-26404329 MsG0580025903.01.T01:intron 35.0%
!! AATCACCTTTAGCTCCTTTT+CGG + Chr5:26405830-26405849 None:intergenic 35.0%
!! GTTCATGTTTTTCAATCGTG+AGG + Chr5:26406467-26406486 None:intergenic 35.0%
!! TTTTGGAGGATATAGGCTTT+GGG - Chr5:26408194-26408213 MsG0580025903.01.T01:CDS 35.0%
!! TTTTTGGAGGATATAGGCTT+TGG - Chr5:26408193-26408212 MsG0580025903.01.T01:CDS 35.0%
!!! AAGAAGGATTCTGGGTTTTT+TGG - Chr5:26403572-26403591 MsG0580025903.01.T01:three_prime_UTR 35.0%
!!! AGTGTTACTTTTGCACTGTA+TGG - Chr5:26403671-26403690 MsG0580025903.01.T01:three_prime_UTR 35.0%
!!! ATAAGTGGTCTGTTTTGGTT+GGG - Chr5:26405154-26405173 MsG0580025903.01.T01:intron 35.0%
!!! ATGGTGGTTGATTTGTGTTT+TGG - Chr5:26403867-26403886 MsG0580025903.01.T01:three_prime_UTR 35.0%
!!! GGTTTTGATTTTTTGAGTGC+TGG - Chr5:26405013-26405032 MsG0580025903.01.T01:intron 35.0%
!!! TATAAGTGGTCTGTTTTGGT+TGG - Chr5:26405153-26405172 MsG0580025903.01.T01:intron 35.0%
!!! TGGTGGTTGATTTGTGTTTT+GGG - Chr5:26403868-26403887 MsG0580025903.01.T01:three_prime_UTR 35.0%
AAGAGAGGTGATTATGTTCC+TGG - Chr5:26403957-26403976 MsG0580025903.01.T01:intron 40.0%
ACATGATACACCTCCTTTGA+AGG + Chr5:26406429-26406448 None:intergenic 40.0%
AGAGAGGTGATTATGTTCCT+GGG - Chr5:26403958-26403977 MsG0580025903.01.T01:intron 40.0%
ATGGAAACGATAACAGTGAC+TGG + Chr5:26407169-26407188 None:intergenic 40.0%
ATGGACACTTACAGATACCA+TGG - Chr5:26405591-26405610 MsG0580025903.01.T01:intron 40.0%
ATGTGGTTATAAAGGGAGCA+AGG - Chr5:26406936-26406955 MsG0580025903.01.T01:intron 40.0%
ATTGTGGTCTCATTTGGACT+TGG - Chr5:26406767-26406786 MsG0580025903.01.T01:intron 40.0%
CAACACACATTCACCTTCAA+AGG - Chr5:26406413-26406432 MsG0580025903.01.T01:intron 40.0%
CGAACACGTGATGAAATTTC+TGG - Chr5:26405645-26405664 MsG0580025903.01.T01:intron 40.0%
CTGTGTATTGTGGTCTCATT+TGG - Chr5:26406761-26406780 MsG0580025903.01.T01:intron 40.0%
GAAGAAACAGATTCTTCCTC+AGG - Chr5:26407087-26407106 MsG0580025903.01.T01:intron 40.0%
GCTTAATATTGCCGCTCTTT+GGG - Chr5:26403730-26403749 MsG0580025903.01.T01:three_prime_UTR 40.0%
GTAAATAGATCAGATGGCTG+TGG + Chr5:26407681-26407700 None:intergenic 40.0%
TCATGACATTGCTACCGAAA+AGG - Chr5:26405813-26405832 MsG0580025903.01.T01:intron 40.0%
TGCCTTTGATACAAGTTCCT+TGG - Chr5:26404853-26404872 MsG0580025903.01.T01:intron 40.0%
TGTACAACTCCCCTTAATCT+TGG - Chr5:26408277-26408296 MsG0580025903.01.T01:CDS 40.0%
TGTTAAAGGATATGGCGTTG+AGG - Chr5:26407710-26407729 MsG0580025903.01.T01:intron 40.0%
TTACCCTTGAATAGCAATGG+GGG - Chr5:26408142-26408161 MsG0580025903.01.T01:intron 40.0%
TTTGCATTTCCATTTCCGTG+AGG - Chr5:26407134-26407153 MsG0580025903.01.T01:intron 40.0%
! ACTTTTGCACTGTATGGTGA+TGG - Chr5:26403677-26403696 MsG0580025903.01.T01:three_prime_UTR 40.0%
! AGAGCTGCTTTGCCATAAAT+AGG - Chr5:26408017-26408036 MsG0580025903.01.T01:CDS 40.0%
! CTCGAATAAGGCATTCCAAA+CGG - Chr5:26404566-26404585 MsG0580025903.01.T01:intron 40.0%
! CTTTGAAGGTGAATGTGTGT+TGG + Chr5:26406415-26406434 None:intergenic 40.0%
! TGATTATGTTCCTGGGTTGA+AGG - Chr5:26403965-26403984 MsG0580025903.01.T01:intron 40.0%
! TGCCTATAAGTGGTCTGTTT+TGG - Chr5:26405149-26405168 MsG0580025903.01.T01:intron 40.0%
! TTTTCAGATGGCCCATTTCA+TGG + Chr5:26407224-26407243 None:intergenic 40.0%
!! AAGGAGCATGCTTTGAAGAA+TGG - Chr5:26405365-26405384 MsG0580025903.01.T01:intron 40.0%
!! TGAAATTTCTGGTGTGAGAC+AGG - Chr5:26405656-26405675 MsG0580025903.01.T01:intron 40.0%
!! TTGGGATCTTCCTGCTATTT+TGG - Chr5:26403748-26403767 MsG0580025903.01.T01:three_prime_UTR 40.0%
!!! AAGGATTCTGGGTTTTTTGG+TGG - Chr5:26403575-26403594 MsG0580025903.01.T01:three_prime_UTR 40.0%
!!! ACTTTTTCAGGTAGATGGCA+TGG - Chr5:26405307-26405326 MsG0580025903.01.T01:intron 40.0%
!!! GGTGGTTGATTTGTGTTTTG+GGG - Chr5:26403869-26403888 MsG0580025903.01.T01:three_prime_UTR 40.0%
AGGGAAATGGTTAGAAGAGG+AGG - Chr5:26406839-26406858 MsG0580025903.01.T01:intron 45.0%
AGTCGGAAACTCAAGTGGAT+TGG + Chr5:26407034-26407053 None:intergenic 45.0%
AGTTGTTTGAAGAACAGGGG+TGG - Chr5:26406077-26406096 MsG0580025903.01.T01:intron 45.0%
ATGGAATGGGAACTGCTGAA+TGG - Chr5:26403907-26403926 MsG0580025903.01.T01:exon 45.0%
ATTACTAGAGTGAAGGAGGG+TGG + Chr5:26406632-26406651 None:intergenic 45.0%
ATTCACCTTGCAGACCTGTT+GGG + Chr5:26406536-26406555 None:intergenic 45.0%
CAACTCAGTGACAGGTTCAT+TGG - Chr5:26407889-26407908 MsG0580025903.01.T01:intron 45.0%
CACACATTCACCTTCAAAGG+AGG - Chr5:26406416-26406435 MsG0580025903.01.T01:intron 45.0%
CATACTATGAAGCACGGACA+CGG - Chr5:26406100-26406119 MsG0580025903.01.T01:intron 45.0%
CGCTTAATATTGCCGCTCTT+TGG - Chr5:26403729-26403748 MsG0580025903.01.T01:three_prime_UTR 45.0%
GAAATGGTTAGAAGAGGAGG+GGG - Chr5:26406842-26406861 MsG0580025903.01.T01:intron 45.0%
GAGTGTCTGTGCTTCATAGA+TGG - Chr5:26406253-26406272 MsG0580025903.01.T01:intron 45.0%
GATCAGACATAGAGTGACCA+TGG + Chr5:26405611-26405630 None:intergenic 45.0%
GGAAATGGTTAGAAGAGGAG+GGG - Chr5:26406841-26406860 MsG0580025903.01.T01:intron 45.0%
GGCTGCTTAGTGAGGATAAA+GGG - Chr5:26406820-26406839 MsG0580025903.01.T01:intron 45.0%
GGGAAATGGTTAGAAGAGGA+GGG - Chr5:26406840-26406859 MsG0580025903.01.T01:intron 45.0%
GTGAATGTGTGTTGGGACTT+GGG + Chr5:26406407-26406426 None:intergenic 45.0%
GTTGTTCTCATTAGCTGTCC+TGG - Chr5:26404462-26404481 MsG0580025903.01.T01:intron 45.0%
TAGTCAGTCGGAAACTCAAG+TGG + Chr5:26407039-26407058 None:intergenic 45.0%
TATGAAGCACAGACACTCCT+CGG + Chr5:26406251-26406270 None:intergenic 45.0%
TGAGTTCTCTCGGCGTATAT+AGG - Chr5:26408115-26408134 MsG0580025903.01.T01:intron 45.0%
TGCTACCGAAAAGGAGCTAA+AGG - Chr5:26405822-26405841 MsG0580025903.01.T01:intron 45.0%
TGGCTGCTTAGTGAGGATAA+AGG - Chr5:26406819-26406838 MsG0580025903.01.T01:intron 45.0%
TGGTTATAAAGGGAGCAAGG+AGG - Chr5:26406939-26406958 MsG0580025903.01.T01:intron 45.0%
TTACTAGAGTGAAGGAGGGT+GGG + Chr5:26406631-26406650 None:intergenic 45.0%
TTCGGTTGGAAGGGAATGAT+GGG - Chr5:26404324-26404343 MsG0580025903.01.T01:intron 45.0%
TTCTTCTCACAATGGCATGC+AGG + Chr5:26407073-26407092 None:intergenic 45.0%
TTGAAACTCACCTTCAACCC+AGG + Chr5:26403978-26403997 None:intergenic 45.0%
TTTCGGTTGGAAGGGAATGA+TGG - Chr5:26404323-26404342 MsG0580025903.01.T01:intron 45.0%
! GTGTAGCTTTTCGGTTGGAA+GGG - Chr5:26404315-26404334 MsG0580025903.01.T01:intron 45.0%
! TCGCAGTTTTTGCACTCAAC+TGG - Chr5:26406364-26406383 MsG0580025903.01.T01:intron 45.0%
! TGGGTTGAAGGTGAGTTTCA+AGG - Chr5:26403977-26403996 MsG0580025903.01.T01:intron 45.0%
! TGTGTAGCTTTTCGGTTGGA+AGG - Chr5:26404314-26404333 MsG0580025903.01.T01:intron 45.0%
! TTTGGTGGTCATGGGATTGT+GGG - Chr5:26403590-26403609 MsG0580025903.01.T01:three_prime_UTR 45.0%
!! AGAGTTGATGGGTGCTCTAA+AGG - Chr5:26403524-26403543 MsG0580025903.01.T01:three_prime_UTR 45.0%
!! GAGTTGATGGGTGCTCTAAA+GGG - Chr5:26403525-26403544 MsG0580025903.01.T01:three_prime_UTR 45.0%
!! TTTTGGTGGTCATGGGATTG+TGG - Chr5:26403589-26403608 MsG0580025903.01.T01:three_prime_UTR 45.0%
!!! CTGGGTTTTTTGGTGGTCAT+GGG - Chr5:26403582-26403601 MsG0580025903.01.T01:three_prime_UTR 45.0%
!!! TCTGGGTTTTTTGGTGGTCA+TGG - Chr5:26403581-26403600 MsG0580025903.01.T01:three_prime_UTR 45.0%
!!! TTGGTTGCGGTTTGGCTTTT+GGG - Chr5:26403627-26403646 MsG0580025903.01.T01:three_prime_UTR 45.0%
!! TAATTTAAAAAAATAAAAGT+CGG - Chr5:26404113-26404132 MsG0580025903.01.T01:intron 5.0%
AAAGCCAAACCGCAACCAAG+TGG + Chr5:26403626-26403645 None:intergenic 50.0%
AGAATGGACAGGTGGCACTT+CGG - Chr5:26406875-26406894 MsG0580025903.01.T01:intron 50.0%
AGATCAGATGGCTGTGGCAT+TGG + Chr5:26407675-26407694 None:intergenic 50.0%
AGCAGGAAGATCCCAAAGAG+CGG + Chr5:26403744-26403763 None:intergenic 50.0%
AGCATAGCTCCTCACGGAAA+TGG + Chr5:26407146-26407165 None:intergenic 50.0%
ATGAACCCAACAGGTCTGCA+AGG - Chr5:26406528-26406547 MsG0580025903.01.T01:intron 50.0%
CATTCACCTTGCAGACCTGT+TGG + Chr5:26406537-26406556 None:intergenic 50.0%
GAGTAGAGAGCGAGAGACAT+AGG + Chr5:26404903-26404922 None:intergenic 50.0%
GGGTGGCATACTATGAAGCA+CGG - Chr5:26406094-26406113 MsG0580025903.01.T01:intron 50.0%
GGTCACTCTATGTCTGATCC+TGG - Chr5:26405612-26405631 MsG0580025903.01.T01:intron 50.0%
GGTGAATGTGTGTTGGGACT+TGG + Chr5:26406408-26406427 None:intergenic 50.0%
! CCACCCCCATTGCTATTCAA+GGG + Chr5:26408148-26408167 None:intergenic 50.0%
! TAAAGGGAGCAAGGAGGCAT+CGG - Chr5:26406945-26406964 MsG0580025903.01.T01:intron 50.0%
! TCCACCCCCATTGCTATTCA+AGG + Chr5:26408149-26408168 None:intergenic 50.0%
!! GATGGGTGCTCTAAAGGGAA+AGG - Chr5:26403530-26403549 MsG0580025903.01.T01:three_prime_UTR 50.0%
!! GGTGCTCTAAAGGGAAAGGT+GGG - Chr5:26403534-26403553 MsG0580025903.01.T01:three_prime_UTR 50.0%
!! TAAAAGTCGGTGTCGGGCAT+TGG - Chr5:26404126-26404145 MsG0580025903.01.T01:intron 50.0%
!! TACAAGTGTCGGTGTCGTGT+CGG - Chr5:26406190-26406209 MsG0580025903.01.T01:intron 50.0%
!!! CTTGGTTGCGGTTTGGCTTT+TGG - Chr5:26403626-26403645 MsG0580025903.01.T01:three_prime_UTR 50.0%
AATGGACAGGTGGCACTTCG+GGG - Chr5:26406877-26406896 MsG0580025903.01.T01:intron 55.0%
ACACGATACGTGTCCGACAC+TGG - Chr5:26406213-26406232 MsG0580025903.01.T01:intron 55.0%
AGAGTGAAGGAGGGTGGGAT+TGG + Chr5:26406626-26406645 None:intergenic 55.0%
AGCTGAATCCAGCTCCAGTG+GGG - Chr5:26406596-26406615 MsG0580025903.01.T01:CDS 55.0%
CACGATACGTGTCCGACACT+GGG - Chr5:26406214-26406233 MsG0580025903.01.T01:intron 55.0%
CACTGGAGCTGGATTCAGCT+CGG + Chr5:26406596-26406615 None:intergenic 55.0%
CCCTTGAATAGCAATGGGGG+TGG - Chr5:26408145-26408164 MsG0580025903.01.T01:intron 55.0%
GAATGGACAGGTGGCACTTC+GGG - Chr5:26406876-26406895 MsG0580025903.01.T01:intron 55.0%
GACTGGAGCATAGCTCCTCA+CGG + Chr5:26407152-26407171 None:intergenic 55.0%
GAGCTGAATCCAGCTCCAGT+GGG - Chr5:26406595-26406614 MsG0580025903.01.T01:CDS 55.0%
GAGTGAAGGAGGGTGGGATT+GGG + Chr5:26406625-26406644 None:intergenic 55.0%
GATTAGGCGTGTCCCAGTGT+CGG + Chr5:26406229-26406248 None:intergenic 55.0%
GCACAGACACTCCTCGGATT+AGG + Chr5:26406245-26406264 None:intergenic 55.0%
GCGCTTCAAAAAGCTGCCCT+TGG + Chr5:26403712-26403731 None:intergenic 55.0%
GCTCAGGTTCCACTTGGTTG+CGG - Chr5:26403614-26403633 MsG0580025903.01.T01:three_prime_UTR 55.0%
GGAGCAAGTGTAGAAGGGAG+AGG - Chr5:26406289-26406308 MsG0580025903.01.T01:CDS 55.0%
GGTTCCACTTGGTTGCGGTT+TGG - Chr5:26403619-26403638 MsG0580025903.01.T01:three_prime_UTR 55.0%
TCATGGGATTGTGGGAGCTC+AGG - Chr5:26403598-26403617 MsG0580025903.01.T01:three_prime_UTR 55.0%
! GGTTGGAAGGGAATGATGGG+TGG - Chr5:26404327-26404346 MsG0580025903.01.T01:intron 55.0%
!! GGGTGCTCTAAAGGGAAAGG+TGG - Chr5:26403533-26403552 MsG0580025903.01.T01:three_prime_UTR 55.0%
!! GTGATGGTGCTGCGAACCAA+GGG - Chr5:26403693-26403712 MsG0580025903.01.T01:three_prime_UTR 55.0%
!! TGCAGGCATTTGGTGCTGAC+AGG - Chr5:26407985-26408004 MsG0580025903.01.T01:CDS 55.0%
ACAGGTGGCACTTCGGGGAA+GGG - Chr5:26406882-26406901 MsG0580025903.01.T01:intron 60.0%
ACTGGGACACGCCTAATCCG+AGG - Chr5:26406231-26406250 MsG0580025903.01.T01:intron 60.0%
CGAGCTGAATCCAGCTCCAG+TGG - Chr5:26406594-26406613 MsG0580025903.01.T01:CDS 60.0%
CGTGTTCGGTATGTGCTGCC+AGG + Chr5:26405633-26405652 None:intergenic 60.0%
GCTGAATCCAGCTCCAGTGG+GGG - Chr5:26406597-26406616 MsG0580025903.01.T01:CDS 60.0%
GTGGGAGCTCAGGTTCCACT+TGG - Chr5:26403608-26403627 MsG0580025903.01.T01:three_prime_UTR 60.0%
TGGAGCTGGATTCAGCTCGG+TGG + Chr5:26406593-26406612 None:intergenic 60.0%
! AGCTGGATTCAGCTCGGTGG+AGG + Chr5:26406590-26406609 None:intergenic 60.0%
! GCTGTGGCATTGGACTCTCC+TGG + Chr5:26407665-26407684 None:intergenic 60.0%
! TTCAGCTCGGTGGAGGAGCT+AGG + Chr5:26406583-26406602 None:intergenic 60.0%
!! GGTGATGGTGCTGCGAACCA+AGG - Chr5:26403692-26403711 MsG0580025903.01.T01:three_prime_UTR 60.0%
AGGTGGCACTTCGGGGAAGG+GGG - Chr5:26406884-26406903 MsG0580025903.01.T01:intron 65.0%
CACGGACACGGACACGACAC+GGG - Chr5:26406112-26406131 MsG0580025903.01.T01:intron 65.0%
CAGGTGGCACTTCGGGGAAG+GGG - Chr5:26406883-26406902 MsG0580025903.01.T01:intron 65.0%
GACAGGTGGCACTTCGGGGA+AGG - Chr5:26406881-26406900 MsG0580025903.01.T01:intron 65.0%
GCACGGACACGGACACGACA+CGG - Chr5:26406111-26406130 MsG0580025903.01.T01:intron 65.0%
GTGGGATTGGGTTCCCCCAC+TGG + Chr5:26406613-26406632 None:intergenic 65.0%
TTGGGTTCCCCCACTGGAGC+TGG + Chr5:26406607-26406626 None:intergenic 65.0%
!! AGGGAGCAAGGAGGCATCGG+AGG - Chr5:26406948-26406967 MsG0580025903.01.T01:intron 65.0%
!! GGGAGCAAGGAGGCATCGGA+GGG - Chr5:26406949-26406968 MsG0580025903.01.T01:intron 65.0%
!! TCGGTGTCGGGCATTGGCAC+AGG - Chr5:26404132-26404151 MsG0580025903.01.T01:intron 65.0%
GGTGGCACTTCGGGGAAGGG+GGG - Chr5:26406885-26406904 MsG0580025903.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 26403518 26408441 26403518 ID=MsG0580025903.01;Name=MsG0580025903.01
Chr5 mRNA 26403518 26408441 26403518 ID=MsG0580025903.01.T01;Parent=MsG0580025903.01;Name=MsG0580025903.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.85|0.87|1|1|1|8|407|254
Chr5 exon 26403518 26403969 26403518 ID=MsG0580025903.01.T01:exon:4354;Parent=MsG0580025903.01.T01
Chr5 exon 26404228 26404293 26404228 ID=MsG0580025903.01.T01:exon:4353;Parent=MsG0580025903.01.T01
Chr5 exon 26404427 26404480 26404427 ID=MsG0580025903.01.T01:exon:4352;Parent=MsG0580025903.01.T01
Chr5 exon 26406116 26406187 26406116 ID=MsG0580025903.01.T01:exon:4351;Parent=MsG0580025903.01.T01
Chr5 exon 26406282 26406377 26406282 ID=MsG0580025903.01.T01:exon:4350;Parent=MsG0580025903.01.T01
Chr5 exon 26406565 26406642 26406565 ID=MsG0580025903.01.T01:exon:4349;Parent=MsG0580025903.01.T01
Chr5 exon 26407973 26408052 26407973 ID=MsG0580025903.01.T01:exon:4348;Parent=MsG0580025903.01.T01
Chr5 exon 26408168 26408441 26408168 ID=MsG0580025903.01.T01:exon:4347;Parent=MsG0580025903.01.T01
Chr5 CDS 26408168 26408441 26408168 ID=MsG0580025903.01.T01:cds;Parent=MsG0580025903.01.T01
Chr5 CDS 26407973 26408052 26407973 ID=MsG0580025903.01.T01:cds;Parent=MsG0580025903.01.T01
Chr5 CDS 26406565 26406642 26406565 ID=MsG0580025903.01.T01:cds;Parent=MsG0580025903.01.T01
Chr5 CDS 26406282 26406377 26406282 ID=MsG0580025903.01.T01:cds;Parent=MsG0580025903.01.T01
Chr5 CDS 26406116 26406187 26406116 ID=MsG0580025903.01.T01:cds;Parent=MsG0580025903.01.T01
Chr5 CDS 26404427 26404480 26404427 ID=MsG0580025903.01.T01:cds;Parent=MsG0580025903.01.T01
Chr5 CDS 26404228 26404293 26404228 ID=MsG0580025903.01.T01:cds;Parent=MsG0580025903.01.T01
Chr5 CDS 26403925 26403969 26403925 ID=MsG0580025903.01.T01:cds;Parent=MsG0580025903.01.T01
Chr5 three_prime_UTR 26403518 26403924 26403518 ID=MsG0580025903.01.T01:three_prime_utr;Parent=MsG0580025903.01.T01
Gene Sequence

>MsG0580025903.01.T01

ATGGGGAGAGTTGATGGGTGCTCTAAAGGGAAAGGTGGGTCCATGCATTTTTATAAGAAGGATTCTGGGTTTTTTGGTGGTCATGGGATTGTGGGAGCTCAGGTTCCACTTGGTTGCGGTTTGGCTTTTGGGCAAAAGTATATGAAGAATGAGAGTGTTACTTTTGCACTGTATGGTGATGGTGCTGCGAACCAAGGGCAGCTTTTTGAAGCGCTTAATATTGCCGCTCTTTGGGATCTTCCTGCTATTTTGGTTTGTGAGAAAATCATTGTGAATGGAATGGGAACTGCTGAATGGAAAGCTGCTAAGAGTCCTGCTTATTATAAGAGAGGTGATTATGTTCCTGGGTTGAAGGTAGATGGCATGGATGTTCTTGCTGTGAAACAAGCTGTTAAATTTGCAAAGGAGCATGCTTTGAAGAATGGACCCATTATTCTTGAAATGGACACTTACAGATACCATGGTCACTCTATGTCTGATCCTGGCAGCACATACCGAACACGTGATGAAATTTCTGGTGTGAGACAGGAGCGTGATCCAATTGAGAGAGTAAAAAAGCTGTTATTGTCTCATGACATTGCTACCGAAAAGGAGCTAAAGGACACTGAAAAAGAAGTCAGAAAAGAAGTTGATGAAGCCATTGCTAAAGCAAAGGAGAGTCCAATGCCACAGCCATCTGATCTATTTACCAATGTATATGTTAAAGGATATGGCGTTGAGGCATTTGGTGCTGACAGGAAAGAAGTGAGAGCTGCTTTGCCATAA

Protein sequence

>MsG0580025903.01.T01

MGRVDGCSKGKGGSMHFYKKDSGFFGGHGIVGAQVPLGCGLAFGQKYMKNESVTFALYGDGAANQGQLFEALNIAALWDLPAILVCEKIIVNGMGTAEWKAAKSPAYYKRGDYVPGLKVDGMDVLAVKQAVKFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVKKLLLSHDIATEKELKDTEKEVRKEVDEAIAKAKESPMPQPSDLFTNVYVKGYGVEAFGADRKEVRAALP*