AlfalfaGEDB | MsG0280007992.01

M. sativa cultivar ZhongmuNo.1 / MsG0280007992.01

KEGG: K05931
GO: -
PFAM: PF06325

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007992.01.T01	XP_013463251.1	71.26	254	28	4	1	209	1	254	4.39E-100	311

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007992.01.T01	A3KPF2	42.435	271	101	6	10	226	8	277	1.28E-50	175

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007992.01.T01	A0A072V7D9	71.260	254	28	4	1	209	1	254	2.10e-100	311

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048769.01	MsG0280007992.01	0.800117	1.674933e-48	7.735598e-46
MsG0180000155.01	MsG0280007992.01	0.825909	3.625096e-54	3.349047e-51
MsG0180000580.01	MsG0280007992.01	0.809385	1.942268e-50	1.138808e-47
MsG0180003572.01	MsG0280007992.01	0.800873	1.174687e-48	5.530576e-46
MsG0180004056.01	MsG0280007992.01	0.818735	1.678683e-52	1.266863e-49
MsG0180004252.01	MsG0280007992.01	0.833841	4.230254e-56	4.931422e-53
MsG0180005397.01	MsG0280007992.01	0.826610	2.468368e-54	2.326167e-51
MsG0180005787.01	MsG0280007992.01	0.811438	6.999298e-51	4.332831e-48
MsG0180006050.01	MsG0280007992.01	0.804013	2.648278e-49	1.350661e-46
MsG0280006545.01	MsG0280007992.01	0.810968	8.852080e-51	5.412475e-48
MsG0280007847.01	MsG0280007992.01	0.803010	4.274245e-49	2.124324e-46
MsG0280007992.01	MsG0280008738.01	0.838263	3.190342e-57	4.249994e-54
MsG0280007992.01	MsG0280008936.01	0.811968	5.368644e-51	3.370266e-48
MsG0280007992.01	MsG0280009054.01	0.851111	1.098100e-60	2.199012e-57
MsG0280007992.01	MsG0280010158.01	0.809664	1.691968e-50	9.994389e-48
MsG0280007992.01	MsG0280010287.01	0.810961	8.883850e-51	5.430904e-48
MsG0280007992.01	MsG0280010595.01	0.805416	1.349320e-49	7.134479e-47
MsG0280007992.01	MsG0380013145.01	0.825438	4.688316e-54	4.273033e-51
MsG0280007992.01	MsG0380016005.01	0.815440	9.233275e-52	6.366458e-49
MsG0280007992.01	MsG0380016604.01	0.813876	2.050014e-51	1.354776e-48
MsG0280007992.01	MsG0380016923.01	0.801995	6.921836e-49	3.352506e-46
MsG0280007992.01	MsG0380017401.01	0.805362	1.384638e-49	7.311246e-47
MsG0280007992.01	MsG0380017797.01	0.830767	2.440048e-55	2.595779e-52
MsG0280007992.01	MsG0380018033.01	0.827395	1.602126e-54	1.544945e-51
MsG0280007992.01	MsG0480018479.01	0.827005	1.986527e-54	1.893612e-51
MsG0280007992.01	MsG0480020675.01	0.841046	6.024469e-58	8.744087e-55
MsG0280007992.01	MsG0480021735.01	0.806926	6.488320e-50	3.566092e-47
MsG0280007992.01	MsG0480022207.01	0.814551	1.454161e-51	9.787526e-49
MsG0280007992.01	MsG0480022672.01	0.837866	4.037384e-57	5.314126e-54
MsG0280007992.01	MsG0580024311.01	0.805932	1.051197e-49	5.632558e-47
MsG0280007992.01	MsG0580024339.01	0.821792	3.343987e-53	2.747879e-50
MsG0280007992.01	MsG0580024619.01	0.805775	1.134082e-49	6.052333e-47
MsG0280007992.01	MsG0580024727.01	0.861274	1.151215e-63	3.239582e-60
MsG0280007992.01	MsG0580026460.01	0.806836	6.778645e-50	3.717131e-47
MsG0280007992.01	MsG0580026485.01	0.823941	1.055976e-53	9.222895e-51
MsG0280007992.01	MsG0580029647.01	0.810759	9.823337e-51	5.972639e-48
MsG0280007992.01	MsG0680031000.01	0.812146	4.910699e-51	3.097826e-48
MsG0280007992.01	MsG0680031964.01	0.824610	7.353299e-54	6.546546e-51
MsG0280007992.01	MsG0680034235.01	0.813560	2.406443e-51	1.576701e-48
MsG0280007992.01	MsG0680034445.01	0.810915	9.088258e-51	5.548896e-48
MsG0280007992.01	MsG0680035888.01	0.809359	1.967205e-50	1.152639e-47
MsG0280007992.01	MsG0780036078.01	0.812934	3.301396e-51	2.126637e-48
MsG0280007992.01	MsG0780037330.01	0.803176	3.948945e-49	1.971169e-46
MsG0280007992.01	MsG0780039587.01	0.813452	2.542134e-51	1.660820e-48
MsG0280007992.01	MsG0780040742.01	0.801708	7.925110e-49	3.810586e-46
MsG0280007992.01	MsG0780041268.01	0.845723	3.398857e-59	5.717076e-56
MsG0280007992.01	MsG0880042033.01	0.808288	3.333999e-50	1.898849e-47
MsG0280007992.01	MsG0880042206.01	0.831502	1.610118e-55	1.750585e-52
MsG0280007992.01	MsG0880042857.01	0.813959	1.965299e-51	1.301658e-48
MsG0280007992.01	MsG0880043162.01	0.806961	6.379303e-50	3.509369e-47
MsG0280007992.01	MsG0880043749.01	0.801822	7.511626e-49	3.622308e-46
MsG0280007992.01	MsG0880043816.01	0.827510	1.503710e-54	1.454691e-51
MsG0280007992.01	MsG0880044948.01	0.812827	3.485726e-51	2.238892e-48
MsG0280007992.01	MsG0880044950.01	0.810506	1.114497e-50	6.730049e-48
MsG0280007992.01	MsG0880044975.01	0.823738	1.178651e-53	1.023629e-50
MsG0280007992.01	MsG0880045656.01	0.816425	5.568417e-52	3.944106e-49
MsG0280007992.01	MsG0880045716.01	0.815976	7.014458e-52	4.907898e-49
MsG0280007992.01	MsG0880045951.01	0.806279	8.887365e-50	4.804294e-47
MsG0280007992.01	MsG0880046450.01	0.807392	5.168761e-50	2.875567e-47
MsG0280007992.01	MsG0880046517.01	0.837587	4.761345e-57	6.213372e-54
MsG0280007992.01	MsG0880046535.01	0.832842	7.502603e-56	8.487242e-53
MsG0280007992.01	MsG0880046901.01	0.869146	3.852056e-66	1.430353e-62

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007992.01.T01	MTR_2g436780	71.260	254	28	4	1	209	1	254	5.32e-104	311
MsG0280007992.01.T01	MTR_2g436780	71.260	254	28	4	1	209	1	254	5.63e-104	310
MsG0280007992.01.T01	MTR_4g119900	52.381	252	77	4	1	209	1	252	3.17e-68	218
MsG0280007992.01.T01	MTR_4g119900	52.381	252	77	4	1	209	1	252	3.46e-68	218
MsG0280007992.01.T01	MTR_2g054880	47.000	100	44	2	120	211	38	136	4.35e-21	90.5
MsG0280007992.01.T01	MTR_6g091770	38.235	136	64	6	87	211	50	176	1.08e-16	78.2
MsG0280007992.01.T01	MTR_1g113940	40.000	100	50	3	132	222	35	133	7.33e-14	70.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007992.01.T01	AT5G49020	42.751	269	101	6	10	226	8	275	6.58e-52	176
MsG0280007992.01.T01	AT5G49020	42.435	271	101	6	10	226	8	277	1.30e-51	175
MsG0280007992.01.T01	AT3G06930	43.629	259	95	5	1	209	1	258	1.06e-49	170
MsG0280007992.01.T01	AT3G06930	43.629	259	95	5	1	209	1	258	1.11e-49	170
MsG0280007992.01.T01	AT1G04870	44.444	99	46	3	121	211	48	145	4.04e-20	88.2
MsG0280007992.01.T01	AT3G20020	40.336	119	54	3	101	211	84	193	1.16e-18	84.3
MsG0280007992.01.T01	AT3G20020	40.336	119	54	3	101	211	84	193	1.24e-18	84.3
MsG0280007992.01.T01	AT2G19670	36.567	134	67	4	101	225	49	173	1.83e-16	77.4
MsG0280007992.01.T01	AT4G29510	35.821	134	68	4	101	225	73	197	3.11e-16	77.0
MsG0280007992.01.T01	AT3G20020	39.640	111	44	3	101	211	84	171	7.25e-16	76.3
MsG0280007992.01.T01	AT3G12270	39.167	120	63	3	73	191	219	329	3.66e-12	65.5

Find 55 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTCATCTTCCACTTCTTC+AGG	0.304412	2:-24079558	MsG0280007992.01.T01:intron
GAGAATCGCACTGATTTCTT+TGG	0.333818	2:-24077231	MsG0280007992.01.T01:CDS
TGAATTCCTTCTTCCATTGT+TGG	0.342206	2:+24078175	None:intergenic
GACAGTTCGTGATTATCTTT+TGG	0.348337	2:-24077280	MsG0280007992.01.T01:intron
ATCATATTATGCTGCTGTTA+TGG	0.361691	2:-24077253	MsG0280007992.01.T01:CDS
ATCTCCATCTTCTGCTTCGC+CGG	0.368253	2:-24079645	MsG0280007992.01.T01:CDS
TTTGTCGTTATTTGCTGCTC+AGG	0.389146	2:-24077172	MsG0280007992.01.T01:intron
CAATGTTCAAGGTGCTACTT+TGG	0.392454	2:-24078154	MsG0280007992.01.T01:CDS
TGAACCAGACATCTTATTCC+AGG	0.407021	2:-24078253	MsG0280007992.01.T01:intron
TATAGCTGGGAACCCACTAC+TGG	0.429302	2:-24076998	MsG0280007992.01.T01:CDS
CCTACAGAAGTAAAAGTTCA+AGG	0.448065	2:+24076083	None:intergenic
CAATCGGTTTGCACGGTGGA+AGG	0.448191	2:-24078811	MsG0280007992.01.T01:CDS
AGGTTCTGATGCAGGCAAAC+AGG	0.452072	2:-24078791	MsG0280007992.01.T01:intron
TGCAATAGAAGCATCTGAAA+TGG	0.453461	2:-24077040	MsG0280007992.01.T01:CDS
TGGCTCAGATATCAGAATAT+CGG	0.456942	2:+24076819	None:intergenic
ATCAGAATATCGGCTTTCTC+TGG	0.464533	2:+24076829	None:intergenic
AAGAAGGAATTCAATGTTCA+AGG	0.470542	2:-24078165	MsG0280007992.01.T01:CDS
GTTGATGTTGGTGCTGGTAG+TGG	0.478713	2:-24077198	MsG0280007992.01.T01:CDS
TATGCACACAAACTTATAGC+TGG	0.479561	2:-24077012	MsG0280007992.01.T01:CDS
TAGATTAGGTCCTGTTCAAT+CGG	0.480533	2:-24078827	MsG0280007992.01.T01:CDS
TTCTATTCAGTTTAGAAATG+AGG	0.487369	2:-24078225	MsG0280007992.01.T01:CDS
GCTCATTGACGGATGCTAAA+GGG	0.487569	2:+24079675	None:intergenic
GTCGGAGACAATGGAGGAAT+CGG	0.494836	2:-24079726	None:intergenic
TCCTGTTCAATCGGTTTGCA+CGG	0.509417	2:-24078818	MsG0280007992.01.T01:CDS
CAGAATCGAACCTGAAGAAG+TGG	0.509778	2:+24079548	None:intergenic
TCTCCATCTTCTGCTTCGCC+GGG	0.510682	2:-24079644	MsG0280007992.01.T01:CDS
AGCTCATTGACGGATGCTAA+AGG	0.515079	2:+24079674	None:intergenic
ACTCCCGGCGAAGCAGAAGA+TGG	0.533903	2:+24079641	None:intergenic
TGTATTCCAACAATGGAAGA+AGG	0.538629	2:-24078181	MsG0280007992.01.T01:CDS
GCGGTGAGGCGAAGAACTCC+CGG	0.539359	2:+24079626	None:intergenic
ACCGTGCAAACCGATTGAAC+AGG	0.542302	2:+24078817	None:intergenic
ACGGTGGAAGGTTCTGATGC+AGG	0.542897	2:-24078799	MsG0280007992.01.T01:CDS
GAACCAGACATCTTATTCCA+GGG	0.551770	2:-24078252	MsG0280007992.01.T01:intron
GGTCGTGTAGTAGTTGATGT+TGG	0.555296	2:-24077210	MsG0280007992.01.T01:CDS
TATTCTGATATCTGAGCCAT+GGG	0.568616	2:-24076815	MsG0280007992.01.T01:intron
TTCCATTGTTGGAATACACA+TGG	0.574632	2:+24078186	None:intergenic
ATTGTTGGAATACACATGGA+AGG	0.577705	2:+24078190	None:intergenic
GTAGTAGTTGATGTTGGTGC+TGG	0.580478	2:-24077204	MsG0280007992.01.T01:CDS
ATGCACACAAACTTATAGCT+GGG	0.580939	2:-24077011	MsG0280007992.01.T01:CDS
GTGGTGAATTTGAAGAGTAT+CGG	0.582479	2:+24079604	None:intergenic
ATATTCTGATATCTGAGCCA+TGG	0.583118	2:-24076816	MsG0280007992.01.T01:CDS
TTCCATGTGTATTCCAACAA+TGG	0.592604	2:-24078188	MsG0280007992.01.T01:CDS
AAACTGAATAGAAACTCCCC+TGG	0.597537	2:+24078235	None:intergenic
AGATGATGACAGCTCATTGA+CGG	0.599958	2:+24079664	None:intergenic
AACCAGACATCTTATTCCAG+GGG	0.603239	2:-24078251	MsG0280007992.01.T01:intron
TTTGAAGAGTATCGGCGGTG+AGG	0.613780	2:+24079612	None:intergenic
ATAGCTGGGAACCCACTACT+GGG	0.619031	2:-24076997	MsG0280007992.01.T01:intron
AGGAATCGGCGGCGATAAAG+CGG	0.627858	2:-24079712	MsG0280007992.01.T01:CDS
GTAATCCGTTGACCCAGTAG+TGG	0.628556	2:+24076985	None:intergenic
GTTATCAAAGGCAGAGTCGG+AGG	0.631228	2:-24076863	MsG0280007992.01.T01:intron
TAATCCGTTGACCCAGTAGT+GGG	0.647291	2:+24076986	None:intergenic
TGTTCAATCGGTTTGCACGG+TGG	0.648868	2:-24078815	MsG0280007992.01.T01:CDS
GGAGACAATGGAGGAATCGG+CGG	0.672177	2:-24079723	None:intergenic
GTGAATTTGAAGAGTATCGG+CGG	0.682974	2:+24079607	None:intergenic
AAGCAATCTGATGAGAATCG+TGG	0.706879	2:+24079585	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGAATATAAATTAATATCA+TGG	-	Chr2:24077377-24077396	MsG0280007992.01.T01:intron	10.0%
!!	CAAAAAATAAAGATAAATAA+AGG	+	Chr2:24079341-24079360	None:intergenic	10.0%
!!	CATATATTTATAAAATCATA+TGG	-	Chr2:24077882-24077901	MsG0280007992.01.T01:intron	10.0%
!!	GTTAATAAATATATCAAAAT+TGG	+	Chr2:24076813-24076832	None:intergenic	10.0%
!!	TAAAATAAAAGTAACTATAT+TGG	-	Chr2:24078141-24078160	MsG0280007992.01.T01:intron	10.0%
!!!	ATTTTGTTAATAAATATGTT+TGG	-	Chr2:24076617-24076636	MsG0280007992.01.T01:intron	10.0%
!!!	CAAAAATATTTTCATTATTA+TGG	-	Chr2:24078387-24078406	MsG0280007992.01.T01:intron	10.0%
!!!	TATAGTTACTTTTATTTTAA+AGG	+	Chr2:24078140-24078159	None:intergenic	10.0%
!!	AGAAATTAAAAACAAAATCT+AGG	+	Chr2:24079454-24079473	None:intergenic	15.0%
!!	TAATCAAAATTAAAACAGTT+TGG	+	Chr2:24077708-24077727	None:intergenic	15.0%
!!!	TTTTATTTGGATATCAATTT+AGG	-	Chr2:24076381-24076400	MsG0280007992.01.T01:intron	15.0%
!!	AAATTCGATAACACTTTAAA+TGG	+	Chr2:24076878-24076897	None:intergenic	20.0%
!!	AATATATGTTGAATGATAAC+AGG	+	Chr2:24077870-24077889	None:intergenic	20.0%
!!	ATAAAACAATACTAATTGAG+GGG	+	Chr2:24077239-24077258	None:intergenic	20.0%
!!	ATGAGATACATAAAAATCAA+AGG	-	Chr2:24077793-24077812	MsG0280007992.01.T01:intron	20.0%
!!	CATAAAACAATACTAATTGA+GGG	+	Chr2:24077240-24077259	None:intergenic	20.0%
!!	GTTAATCAATGTTCAATATA+TGG	+	Chr2:24076659-24076678	None:intergenic	20.0%
!!	TAGCAGTTACATAAAAATTA+TGG	+	Chr2:24076536-24076555	None:intergenic	20.0%
!!	TCATAAAACAATACTAATTG+AGG	+	Chr2:24077241-24077260	None:intergenic	20.0%
!!	TTATATATACAGGTTATCAA+AGG	-	Chr2:24078925-24078944	MsG0280007992.01.T01:intron	20.0%
!!	TTCAAAATCCAAAACATTTA+GGG	+	Chr2:24079640-24079659	None:intergenic	20.0%
!!!	AATTCTAAACGTATTTTGTT+GGG	-	Chr2:24079136-24079155	MsG0280007992.01.T01:intron	20.0%
!!!	ATAATTTTATGTGTGTAGTT+TGG	-	Chr2:24078219-24078238	MsG0280007992.01.T01:CDS	20.0%
!!!	CATTGTAATTCTTATTTTCT+AGG	-	Chr2:24078027-24078046	MsG0280007992.01.T01:intron	20.0%
!!!	GTATATGAACCTTTTTTAAA+AGG	+	Chr2:24077492-24077511	None:intergenic	20.0%
!!!	TTTAAAGTGTTATCGAATTT+AGG	-	Chr2:24076878-24076897	MsG0280007992.01.T01:intron	20.0%
!	CTTCAAAATCCAAAACATTT+AGG	+	Chr2:24079641-24079660	None:intergenic	25.0%
!	GGTTAATAAAGTTTAGTTGA+TGG	-	Chr2:24076775-24076794	MsG0280007992.01.T01:intron	25.0%
!	TGGAAGAAAAAAAAATCTCA+CGG	+	Chr2:24078840-24078859	None:intergenic	25.0%
!	TGTCAAGTATATCTTAAACA+CGG	+	Chr2:24077913-24077932	None:intergenic	25.0%
!	TTAGTCTGTTCATTAGTTAT+TGG	-	Chr2:24078869-24078888	MsG0280007992.01.T01:intron	25.0%
!	TTCTATTCAGTTTAGAAATG+AGG	-	Chr2:24077575-24077594	MsG0280007992.01.T01:intron	25.0%
!	TTTATTAACCGTGAATTTGA+AGG	+	Chr2:24076765-24076784	None:intergenic	25.0%
!!	ATCTAAAATTAACACTCACT+AGG	+	Chr2:24077770-24077789	None:intergenic	25.0%
!!	CAATTCTAAACGTATTTTGT+TGG	-	Chr2:24079135-24079154	MsG0280007992.01.T01:intron	25.0%
!!	GTTTTGCAGATATTTAGATT+AGG	-	Chr2:24076959-24076978	MsG0280007992.01.T01:intron	25.0%
!!	TGTGATTAACCTTAATTTGA+AGG	-	Chr2:24076691-24076710	MsG0280007992.01.T01:intron	25.0%
!!	TTTGTGTTTGTTAGTAAGAT+AGG	-	Chr2:24078254-24078273	MsG0280007992.01.T01:intron	25.0%
!!!	AATGTGACATTATTTGTTGT+CGG	+	Chr2:24077312-24077331	None:intergenic	25.0%
!!!	ACAGTGTAGCTTTTTTTTAT+TGG	+	Chr2:24079614-24079633	None:intergenic	25.0%
!!!	ACATATTTTTACCCTTTTGT+TGG	-	Chr2:24079164-24079183	MsG0280007992.01.T01:intron	25.0%
!!!	AGTTGGAACATTTGAAATTT+TGG	-	Chr2:24076732-24076751	MsG0280007992.01.T01:intron	25.0%
!!!	CATTACTTTTCATGTTTTAC+TGG	-	Chr2:24078000-24078019	MsG0280007992.01.T01:intron	25.0%
!!!	CTTATTTTCTAGGCATAATT+GGG	-	Chr2:24078037-24078056	MsG0280007992.01.T01:intron	25.0%
!!!	GAAAATATTTTTGCAGAAGA+TGG	+	Chr2:24078380-24078399	None:intergenic	25.0%
!!!	TCTTATTTTCTAGGCATAAT+TGG	-	Chr2:24078036-24078055	MsG0280007992.01.T01:intron	25.0%
!!!	TTATAGAAGTACCAACAAAA+GGG	+	Chr2:24079178-24079197	None:intergenic	25.0%
	AAGAAGGAATTCAATGTTCA+AGG	-	Chr2:24077635-24077654	MsG0280007992.01.T01:intron	30.0%
	ATCATATTATGCTGCTGTTA+TGG	-	Chr2:24078547-24078566	MsG0280007992.01.T01:intron	30.0%
	ATTAGTTATTGGATCAGTCA+GGG	-	Chr2:24078880-24078899	MsG0280007992.01.T01:intron	30.0%
	CACTATTACAACCTCAATTA+GGG	-	Chr2:24077049-24077068	MsG0280007992.01.T01:CDS	30.0%
	CATCAAGAAACATAAAAGAG+GGG	+	Chr2:24078082-24078101	None:intergenic	30.0%
	CATCTACACATGAAAAAAGT+GGG	+	Chr2:24079543-24079562	None:intergenic	30.0%
	GAACAGACTAAAGAAAAAAC+TGG	+	Chr2:24078860-24078879	None:intergenic	30.0%
	GCATCAAGAAACATAAAAGA+GGG	+	Chr2:24078083-24078102	None:intergenic	30.0%
	GTTAATAGCCTTCAAATTCA+CGG	-	Chr2:24076754-24076773	MsG0280007992.01.T01:intron	30.0%
	GTTTCCTTGTAAGATATGAT+TGG	-	Chr2:24077354-24077373	MsG0280007992.01.T01:intron	30.0%
	TAATGCAACTCACTAATGAA+TGG	+	Chr2:24079060-24079079	None:intergenic	30.0%
	TCACTATTACAACCTCAATT+AGG	-	Chr2:24077048-24077067	MsG0280007992.01.T01:CDS	30.0%
	TCATCAACAAAACATGTTAC+AGG	-	Chr2:24078419-24078438	MsG0280007992.01.T01:intron	30.0%
	TCATCCAATCATATCTTACA+AGG	+	Chr2:24077361-24077380	None:intergenic	30.0%
	TCTTACAAGGAAACAACTTT+AGG	+	Chr2:24077348-24077367	None:intergenic	30.0%
	TTCTAACAAATCTGCAATAG+CGG	-	Chr2:24076486-24076505	MsG0280007992.01.T01:intron	30.0%
!	CATTCTTTCATTGACTAACA+AGG	+	Chr2:24079225-24079244	None:intergenic	30.0%
!	CATTTTGTGACTGAAAAGAT+TGG	-	Chr2:24076925-24076944	MsG0280007992.01.T01:intron	30.0%
!	TAGGCATGCATAACTTTTAA+TGG	+	Chr2:24079435-24079454	None:intergenic	30.0%
!!	GTCACTGTTCCTTTTAAAAA+AGG	-	Chr2:24077480-24077499	MsG0280007992.01.T01:intron	30.0%
!!	GTTATAGAAGTACCAACAAA+AGG	+	Chr2:24079179-24079198	None:intergenic	30.0%
	AACACTAATTCAGATGCTAG+CGG	+	Chr2:24078105-24078124	None:intergenic	35.0%
	AACCAACAACAGTTTGCATA+TGG	+	Chr2:24078686-24078705	None:intergenic	35.0%
	AAGACTGCTAGCATACAATT+AGG	+	Chr2:24078466-24078485	None:intergenic	35.0%
	ACAATACTAATTGAGGGGAA+TGG	+	Chr2:24077234-24077253	None:intergenic	35.0%
	ACCAAATGGAGCTAATGTAA+TGG	-	Chr2:24078323-24078342	MsG0280007992.01.T01:intron	35.0%
	ATATTCTGATATCTGAGCCA+TGG	-	Chr2:24078984-24079003	MsG0280007992.01.T01:intron	35.0%
	ATGCACACAAACTTATAGCT+GGG	-	Chr2:24078789-24078808	MsG0280007992.01.T01:intron	35.0%
	ATTGTTGGAATACACATGGA+AGG	+	Chr2:24077613-24077632	None:intergenic	35.0%
	ATTTGATCGTTCAATTCAGG+AGG	-	Chr2:24078294-24078313	MsG0280007992.01.T01:intron	35.0%
	CACAATGTATCTTGACAACA+CGG	+	Chr2:24079109-24079128	None:intergenic	35.0%
	CATTAGTTATTGGATCAGTC+AGG	-	Chr2:24078879-24078898	MsG0280007992.01.T01:intron	35.0%
	CGTATTTGATCGTTCAATTC+AGG	-	Chr2:24078291-24078310	MsG0280007992.01.T01:intron	35.0%
	CTTAGACAACTGTAACAAGT+TGG	+	Chr2:24079677-24079696	None:intergenic	35.0%
	CTTATGTTATTGCCAGAGAT+AGG	-	Chr2:24079252-24079271	MsG0280007992.01.T01:intron	35.0%
	GAAAAGTAGCTATAGCATAG+CGG	-	Chr2:24076461-24076480	MsG0280007992.01.T01:intron	35.0%
	GCAAAAGTCATTCTACAACA+AGG	+	Chr2:24077686-24077705	None:intergenic	35.0%
	GCATCTACACATGAAAAAAG+TGG	+	Chr2:24079544-24079563	None:intergenic	35.0%
	GGCATCAAGAAACATAAAAG+AGG	+	Chr2:24078084-24078103	None:intergenic	35.0%
	GTGCGTAATTGAATGTTAGT+TGG	-	Chr2:24076715-24076734	MsG0280007992.01.T01:intron	35.0%
	GTTAGTCAATGAAAGAATGC+TGG	-	Chr2:24079226-24079245	MsG0280007992.01.T01:intron	35.0%
	TACCATATGCAAACTGTTGT+TGG	-	Chr2:24078681-24078700	MsG0280007992.01.T01:intron	35.0%
	TAGATTAGGTCCTGTTCAAT+CGG	-	Chr2:24076973-24076992	MsG0280007992.01.T01:intron	35.0%
	TATGCACACAAACTTATAGC+TGG	-	Chr2:24078788-24078807	MsG0280007992.01.T01:intron	35.0%
	TATTCTGATATCTGAGCCAT+GGG	-	Chr2:24078985-24079004	MsG0280007992.01.T01:intron	35.0%
	TGAATTCCTTCTTCCATTGT+TGG	+	Chr2:24077628-24077647	None:intergenic	35.0%
	TGATTACTTCAGCTCATCTT+TGG	-	Chr2:24077722-24077741	MsG0280007992.01.T01:intron	35.0%
	TGGCAAAATGTTTCCAACAT+CGG	-	Chr2:24079289-24079308	MsG0280007992.01.T01:intron	35.0%
	TGGCTCAGATATCAGAATAT+CGG	+	Chr2:24078984-24079003	None:intergenic	35.0%
	TGTATTCCAACAATGGAAGA+AGG	-	Chr2:24077619-24077638	MsG0280007992.01.T01:intron	35.0%
	TGTTGGTACTTCTATAACCT+GGG	-	Chr2:24079181-24079200	MsG0280007992.01.T01:intron	35.0%
	TTACAACCTCAATTAGGGAA+TGG	-	Chr2:24077054-24077073	MsG0280007992.01.T01:CDS	35.0%
	TTACGCACACCTTCAAATTA+AGG	+	Chr2:24076703-24076722	None:intergenic	35.0%
	TTCCATGTGTATTCCAACAA+TGG	-	Chr2:24077612-24077631	MsG0280007992.01.T01:intron	35.0%
	TTCCATTGTTGGAATACACA+TGG	+	Chr2:24077617-24077636	None:intergenic	35.0%
	TTGACAAACTGTGTAGTTAG+CGG	-	Chr2:24076573-24076592	MsG0280007992.01.T01:intron	35.0%
	TTGTTGGTACTTCTATAACC+TGG	-	Chr2:24079180-24079199	MsG0280007992.01.T01:intron	35.0%
	TTTGATCGTTCAATTCAGGA+GGG	-	Chr2:24078295-24078314	MsG0280007992.01.T01:intron	35.0%
!	ACTGTTAGCCCTAAATGTTT+TGG	-	Chr2:24079629-24079648	MsG0280007992.01.T01:CDS	35.0%
!	GACAGTTCGTGATTATCTTT+TGG	-	Chr2:24078520-24078539	MsG0280007992.01.T01:intron	35.0%
!	GTGGTGAATTTGAAGAGTAT+CGG	+	Chr2:24076199-24076218	None:intergenic	35.0%
!	GTTCGTGATTATCTTTTGGT+AGG	-	Chr2:24078524-24078543	MsG0280007992.01.T01:intron	35.0%
!	GTTGGAAACATTTTGCCATT+GGG	+	Chr2:24079287-24079306	None:intergenic	35.0%
!	TGTTGGAAACATTTTGCCAT+TGG	+	Chr2:24079288-24079307	None:intergenic	35.0%
!	TGTTTCTCTCTCCTTTTGAA+TGG	+	Chr2:24077129-24077148	None:intergenic	35.0%
!	TTGGAAACATTTTGCCATTG+GGG	+	Chr2:24079286-24079305	None:intergenic	35.0%
!!	TGCAATAGAAGCATCTGAAA+TGG	-	Chr2:24078760-24078779	MsG0280007992.01.T01:intron	35.0%
	AAACTGAATAGAAACTCCCC+TGG	+	Chr2:24077568-24077587	None:intergenic	40.0%
	AAATGTTTCCAACATCGGGA+AGG	-	Chr2:24079294-24079313	MsG0280007992.01.T01:intron	40.0%
	AACCAGACATCTTATTCCAG+GGG	-	Chr2:24077549-24077568	MsG0280007992.01.T01:intron	40.0%
	AAGCAATCTGATGAGAATCG+TGG	+	Chr2:24076218-24076237	None:intergenic	40.0%
	AGATGATGACAGCTCATTGA+CGG	+	Chr2:24076139-24076158	None:intergenic	40.0%
	ATCTGCAATAGCGGTTATAG+TGG	-	Chr2:24076495-24076514	MsG0280007992.01.T01:intron	40.0%
	GAACCAGACATCTTATTCCA+GGG	-	Chr2:24077548-24077567	MsG0280007992.01.T01:intron	40.0%
	GCAGAATATGAACTTACCCA+TGG	+	Chr2:24079004-24079023	None:intergenic	40.0%
	GCCATTACATTAGCTCCATT+TGG	+	Chr2:24078327-24078346	None:intergenic	40.0%
	GGACACAGTTCATGAAATGT+TGG	-	Chr2:24076594-24076613	MsG0280007992.01.T01:intron	40.0%
	GGCAAAATGTTTCCAACATC+GGG	-	Chr2:24079290-24079309	MsG0280007992.01.T01:intron	40.0%
	GGGGTATAAGACAAATGACA+CGG	+	Chr2:24078063-24078082	None:intergenic	40.0%
	GTGATCTCTCACCATTCAAA+AGG	-	Chr2:24077115-24077134	MsG0280007992.01.T01:intron	40.0%
	TCACACATTACTCTCTCATG+TGG	+	Chr2:24077099-24077118	None:intergenic	40.0%
	TGAACCAGACATCTTATTCC+AGG	-	Chr2:24077547-24077566	MsG0280007992.01.T01:intron	40.0%
	TGTTCATCTTCCACTTCTTC+AGG	-	Chr2:24076242-24076261	MsG0280007992.01.T01:intron	40.0%
	TTAGATGTGACGAGTTTGAG+CGG	-	Chr2:24077159-24077178	MsG0280007992.01.T01:intron	40.0%
!	TATTTGCTGCTCAGGTAACT+TGG	-	Chr2:24078636-24078655	MsG0280007992.01.T01:intron	40.0%
!	TGGAAACATTTTGCCATTGG+GGG	+	Chr2:24079285-24079304	None:intergenic	40.0%
!	TTTGTCGTTATTTGCTGCTC+AGG	-	Chr2:24078628-24078647	MsG0280007992.01.T01:intron	40.0%
!!	ATCAGAATATCGGCTTTCTC+TGG	+	Chr2:24078974-24078993	None:intergenic	40.0%
!!	CAATGTTCAAGGTGCTACTT+TGG	-	Chr2:24077646-24077665	MsG0280007992.01.T01:intron	40.0%
!!	GAGAATCGCACTGATTTCTT+TGG	-	Chr2:24078569-24078588	MsG0280007992.01.T01:intron	40.0%
!!	GTGAATTTGAAGAGTATCGG+CGG	+	Chr2:24076196-24076215	None:intergenic	40.0%
	ACATGTTACAGGACTACGTG+AGG	-	Chr2:24078430-24078449	MsG0280007992.01.T01:intron	45.0%
	ATGTGTTATCCTTTGCAGGC+AGG	-	Chr2:24078722-24078741	MsG0280007992.01.T01:intron	45.0%
	CAGAATCGAACCTGAAGAAG+TGG	+	Chr2:24076255-24076274	None:intergenic	45.0%
	CAGGTTATCAAAGGCAGAGT+CGG	-	Chr2:24078934-24078953	MsG0280007992.01.T01:intron	45.0%
	GAAACGACGTTAAATGCTGC+AGG	+	Chr2:24077404-24077423	None:intergenic	45.0%
	GAGGATCCATTCCCTAATTG+AGG	+	Chr2:24077063-24077082	None:intergenic	45.0%
	GATAGGTTTCTTACCCCCAA+TGG	-	Chr2:24079269-24079288	MsG0280007992.01.T01:intron	45.0%
	GCAGATGTGTTATCCTTTGC+AGG	-	Chr2:24078718-24078737	MsG0280007992.01.T01:intron	45.0%
	GGGGTCGGCAAAAAAATAGT+GGG	+	Chr2:24079480-24079499	None:intergenic	45.0%
	TAATCCGTTGACCCAGTAGT+GGG	+	Chr2:24078817-24078836	None:intergenic	45.0%
	TCAGGAGGGAACATACCAAA+TGG	-	Chr2:24078309-24078328	MsG0280007992.01.T01:intron	45.0%
	TGGGGTCGGCAAAAAAATAG+TGG	+	Chr2:24079481-24079500	None:intergenic	45.0%
	TTTCCAACATCGGGAAGGTT+TGG	-	Chr2:24079299-24079318	MsG0280007992.01.T01:intron	45.0%
!	AAGCCTTATCCCACTAAGTG+GGG	+	Chr2:24079499-24079518	None:intergenic	45.0%
!	AGCTCATTGACGGATGCTAA+AGG	+	Chr2:24076129-24076148	None:intergenic	45.0%
!	CAAGCCTTATCCCACTAAGT+GGG	+	Chr2:24079500-24079519	None:intergenic	45.0%
!	CTCAGGTAACTTGGCACTTT+TGG	-	Chr2:24078645-24078664	MsG0280007992.01.T01:intron	45.0%
!	GCTCATTGACGGATGCTAAA+GGG	+	Chr2:24076128-24076147	None:intergenic	45.0%
!	GGTCGTGTAGTAGTTGATGT+TGG	-	Chr2:24078590-24078609	MsG0280007992.01.T01:intron	45.0%
!	GTAGTAGTTGATGTTGGTGC+TGG	-	Chr2:24078596-24078615	MsG0280007992.01.T01:intron	45.0%
!!	TCCTGTTCAATCGGTTTGCA+CGG	-	Chr2:24076982-24077001	MsG0280007992.01.T01:intron	45.0%
!!	TATTAATTATTTATATATAC+AGG	-	Chr2:24078915-24078934	MsG0280007992.01.T01:intron	5.0%
!!!	TAATTAAATGAAATTTTATT+TGG	-	Chr2:24076368-24076387	MsG0280007992.01.T01:intron	5.0%
	ACCGTGCAAACCGATTGAAC+AGG	+	Chr2:24076986-24077005	None:intergenic	50.0%
	ACCTGGGTTTCTGTTTGTGC+AGG	-	Chr2:24079197-24079216	MsG0280007992.01.T01:intron	50.0%
	ATAGCTGGGAACCCACTACT+GGG	-	Chr2:24078803-24078822	MsG0280007992.01.T01:CDS	50.0%
	ATCTCCATCTTCTGCTTCGC+CGG	-	Chr2:24076155-24076174	MsG0280007992.01.T01:intron	50.0%
	ATGTGGAAATCCCACGTGAG+AGG	+	Chr2:24077082-24077101	None:intergenic	50.0%
	CAACCAAACCTTCCCGATGT+TGG	+	Chr2:24079305-24079324	None:intergenic	50.0%
	CCACTTAGTGGGATAAGGCT+TGG	-	Chr2:24079498-24079517	MsG0280007992.01.T01:intron	50.0%
	CTCCCCTGGAATAAGATGTC+TGG	+	Chr2:24077554-24077573	None:intergenic	50.0%
	CTGATCCTTGTGCTCTTGTG+CGG	-	Chr2:24077450-24077469	MsG0280007992.01.T01:intron	50.0%
	CTTAGTGGGATAAGGCTTGG+TGG	-	Chr2:24079501-24079520	MsG0280007992.01.T01:intron	50.0%
	CTTATCCCACTAAGTGGGGT+CGG	+	Chr2:24079495-24079514	None:intergenic	50.0%
	GGGGGTAAGAAACCTATCTC+TGG	+	Chr2:24079267-24079286	None:intergenic	50.0%
	GTAATCCGTTGACCCAGTAG+TGG	+	Chr2:24078818-24078837	None:intergenic	50.0%
	GTCACTGCAGTTCAGACAAG+TGG	+	Chr2:24076856-24076875	None:intergenic	50.0%
	GTTATCAAAGGCAGAGTCGG+AGG	-	Chr2:24078937-24078956	MsG0280007992.01.T01:intron	50.0%
	TATAGCTGGGAACCCACTAC+TGG	-	Chr2:24078802-24078821	MsG0280007992.01.T01:CDS	50.0%
	TTACAGGACTACGTGAGGAC+AGG	-	Chr2:24078435-24078454	MsG0280007992.01.T01:intron	50.0%
!	AGGTTCTGATGCAGGCAAAC+AGG	-	Chr2:24077009-24077028	MsG0280007992.01.T01:CDS	50.0%
!	CCAAGCCTTATCCCACTAAG+TGG	+	Chr2:24079501-24079520	None:intergenic	50.0%
!	TGTTTTGCACCTGCCTGCAA+AGG	+	Chr2:24078734-24078753	None:intergenic	50.0%
!	TTTTGCCGACCCCACTTAGT+GGG	-	Chr2:24079487-24079506	MsG0280007992.01.T01:intron	50.0%
!	TTTTTGCCGACCCCACTTAG+TGG	-	Chr2:24079486-24079505	MsG0280007992.01.T01:intron	50.0%
!!	GTTGATGTTGGTGCTGGTAG+TGG	-	Chr2:24078602-24078621	MsG0280007992.01.T01:intron	50.0%
!!	TGTTCAATCGGTTTGCACGG+TGG	-	Chr2:24076985-24077004	MsG0280007992.01.T01:intron	50.0%
!!	TTTGAAGAGTATCGGCGGTG+AGG	+	Chr2:24076191-24076210	None:intergenic	50.0%
	AGGAATCGGCGGCGATAAAG+CGG	-	Chr2:24076088-24076107	MsG0280007992.01.T01:CDS	55.0%
	AGGGAATGGATCCTCTCACG+TGG	-	Chr2:24077068-24077087	MsG0280007992.01.T01:intron	55.0%
	CGACCCCACTTAGTGGGATA+AGG	-	Chr2:24079493-24079512	MsG0280007992.01.T01:intron	55.0%
	GCCTGCACAAACAGAAACCC+AGG	+	Chr2:24079201-24079220	None:intergenic	55.0%
	GGAACCCACTACTGGGTCAA+CGG	-	Chr2:24078810-24078829	MsG0280007992.01.T01:CDS	55.0%
	GGGAATGGATCCTCTCACGT+GGG	-	Chr2:24077069-24077088	MsG0280007992.01.T01:intron	55.0%
	TCTCCATCTTCTGCTTCGCC+GGG	-	Chr2:24076156-24076175	MsG0280007992.01.T01:intron	55.0%
!	ACGGTGGAAGGTTCTGATGC+AGG	-	Chr2:24077001-24077020	MsG0280007992.01.T01:CDS	55.0%
!!	CAATCGGTTTGCACGGTGGA+AGG	-	Chr2:24076989-24077008	MsG0280007992.01.T01:intron	55.0%
	ACTCCCGGCGAAGCAGAAGA+TGG	+	Chr2:24076162-24076181	None:intergenic	60.0%
!	ACACGCCGCACAAGAGCACA+AGG	+	Chr2:24077458-24077477	None:intergenic	60.0%
	GCGGTGAGGCGAAGAACTCC+CGG	+	Chr2:24076177-24076196	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	24076084	24079738	24076084	ID=MsG0280007992.01;Name=MsG0280007992.01
Chr2	mRNA	24076084	24079738	24076084	ID=MsG0280007992.01.T01;Parent=MsG0280007992.01;Name=MsG0280007992.01.T01;_AED=0.50;_eAED=0.56;_QI=0\|0\|0\|1\|1\|1\|7\|0\|226
Chr2	exon	24079559	24079738	24079559	ID=MsG0280007992.01.T01:exon:40549;Parent=MsG0280007992.01.T01
Chr2	exon	24078792	24078854	24078792	ID=MsG0280007992.01.T01:exon:40548;Parent=MsG0280007992.01.T01
Chr2	exon	24078147	24078267	24078147	ID=MsG0280007992.01.T01:exon:40547;Parent=MsG0280007992.01.T01
Chr2	exon	24077173	24077297	24077173	ID=MsG0280007992.01.T01:exon:40546;Parent=MsG0280007992.01.T01
Chr2	exon	24076998	24077082	24076998	ID=MsG0280007992.01.T01:exon:40545;Parent=MsG0280007992.01.T01
Chr2	exon	24076816	24076871	24076816	ID=MsG0280007992.01.T01:exon:40544;Parent=MsG0280007992.01.T01
Chr2	exon	24076084	24076134	24076084	ID=MsG0280007992.01.T01:exon:40543;Parent=MsG0280007992.01.T01
Chr2	CDS	24079559	24079738	24079559	ID=MsG0280007992.01.T01:cds;Parent=MsG0280007992.01.T01
Chr2	CDS	24078792	24078854	24078792	ID=MsG0280007992.01.T01:cds;Parent=MsG0280007992.01.T01
Chr2	CDS	24078147	24078267	24078147	ID=MsG0280007992.01.T01:cds;Parent=MsG0280007992.01.T01
Chr2	CDS	24077173	24077297	24077173	ID=MsG0280007992.01.T01:cds;Parent=MsG0280007992.01.T01
Chr2	CDS	24076998	24077082	24076998	ID=MsG0280007992.01.T01:cds;Parent=MsG0280007992.01.T01
Chr2	CDS	24076816	24076871	24076816	ID=MsG0280007992.01.T01:cds;Parent=MsG0280007992.01.T01
Chr2	CDS	24076084	24076134	24076084	ID=MsG0280007992.01.T01:cds;Parent=MsG0280007992.01.T01

Gene Sequence

>MsG0280007992.01.T01

ATGGAGGAATCGGCGGCGATAAAGCGGAAGCAGCGAGAATTCCCTTTAGCATCCGTCAATGAGCTGTCATCATCTCCATCTTCTGCTTCGCCGGGAGTTCTTCGCCTCACCGCCGATACTCTTCAAATTCACCACGATTCTCATCAGATTGCTTTCGATGTTCATCTTCCACTTCTTCAGATATTTAGATTAGGTCCTGTTCAATCGGTTTGCACGGTGGAAGGTTCTGATGCAGGCAAACAGACATCTTATTCCAGGGGAGTTTCTATTCAGTTTAGAAATGAGGAAGAGAGTGAAGCCTTCCATGTGTATTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGTGCTACTTTGGAAAGTTTTTCGTGATTATCTTTTGGTAGGATCATATTATGCTGCTGTTATGGAGAATCGCACTGATTTCTTTGGTCGTGTAGTAGTTGATGTTGGTGCTGGTAGTGGTATTTTGTCGTTATTTGCTGCTCAGGCAGGTGCAAAACATGTTTATGCAATAGAAGCATCTGAAATGGCAGAATATGCACACAAACTTATAGCTGGGAACCCACTACTGGAGTCGGAGGATGTTGAATTGCCAGAGAAAGCCGATATTCTGATATCTGAGCCATGGTTGTCTAAGAGTTACTTATCTCGTCGTAACCTTGAACTTTTACTTCTGTAG

Protein sequence

>MsG0280007992.01.T01

MEESAAIKRKQREFPLASVNELSSSPSSASPGVLRLTADTLQIHHDSHQIAFDVHLPLLQIFRLGPVQSVCTVEGSDAGKQTSYSRGVSIQFRNEEESEAFHVYSNNGRRNSMFKVLLWKVFRDYLLVGSYYAAVMENRTDFFGRVVVDVGAGSGILSLFAAQAGAKHVYAIEASEMAEYAHKLIAGNPLLESEDVELPEKADILISEPWLSKSYLSRRNLELLLL*