AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004252.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004252.01.T01 MTR_1g107235 98.413 252 4 0 292 543 167 418 0.0 521
MsG0180004252.01.T01 MTR_1g107235 97.059 170 5 0 1 170 1 170 1.14e-112 341
MsG0180004252.01.T01 MTR_1g107235 97.059 170 5 0 1 170 1 170 1.08e-113 340
MsG0180004252.01.T01 MTR_1g107235 91.549 142 6 2 292 427 167 308 2.57e-85 267
MsG0180004252.01.T01 MTR_4g034770 92.683 82 6 0 197 278 93 174 5.76e-44 162
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004252.01.T01 AT1G49820 77.381 252 57 0 291 542 167 418 1.75e-142 417
MsG0180004252.01.T01 AT1G49820 53.455 275 115 4 3 264 2 276 5.95e-88 278
MsG0180004252.01.T01 ATCG00500 74.074 81 16 1 198 278 287 362 1.22e-31 128

Find 106 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTGTAGCAATTGGTATTA+TGG 0.163684 1:+75620464 MsG0180004252.01.T01:CDS
CCCAAAGTGCAGTGAATTTA+TGG 0.184173 1:-75622235 None:intergenic
ATTCCTAGGAAACTTGATTT+TGG 0.205496 1:+75621115 MsG0180004252.01.T01:CDS
AAAGAGACACCTTATCATTT+TGG 0.231135 1:-75622384 None:intergenic
TTTGATTGGTATGCGTTATT+TGG 0.235748 1:+75619000 MsG0180004252.01.T01:CDS
TCAGTTTATGGGAGGTAGTA+TGG 0.241437 1:+75620491 MsG0180004252.01.T01:CDS
TTATACTCAGAAACTTTATA+TGG 0.271029 1:-75620775 None:intergenic
CTATGTTATGCAGGCATATA+AGG 0.280419 1:+75622169 MsG0180004252.01.T01:intron
CTCAGAAAAGGTTTGATTGC+TGG 0.288772 1:+75619040 MsG0180004252.01.T01:CDS
CCATAAATTCACTGCACTTT+GGG 0.304944 1:+75622235 MsG0180004252.01.T01:CDS
GGAGAAATTGTTGTCGAGTT+TGG 0.308716 1:-75618665 None:intergenic
AAACGATGAAGACGAAATTA+AGG 0.335482 1:-75618720 None:intergenic
TTTCATGACAGTCTGGGATT+TGG 0.336726 1:+75622356 MsG0180004252.01.T01:CDS
TATGCTCTTTCTTTCGTCAT+TGG 0.340213 1:-75618893 None:intergenic
GTTCTACCACGGAGCATAAA+CGG 0.342649 1:+75619140 MsG0180004252.01.T01:CDS
GGTCCATAAAATGCAAATTC+AGG 0.347893 1:-75621071 None:intergenic
TCAAGACAGAACCGGATTAC+TGG 0.349424 1:+75620404 MsG0180004252.01.T01:CDS
GATGCTTTCAAGCACTGAAT+TGG 0.349556 1:-75619253 None:intergenic
ACAGGCACAGGTCAAGTAAA+TGG 0.351335 1:+75620438 MsG0180004252.01.T01:CDS
CCGTGATGCTGAGGCTGTTC+GGG 0.363989 1:+75620822 MsG0180004252.01.T01:CDS
GATCGTACTATGTCTTTGAT+TGG 0.376412 1:+75618986 MsG0180004252.01.T01:CDS
TCAGGGTTGTTATAGATTCC+TGG 0.385724 1:-75622293 None:intergenic
AGATTTATTTCATGACAGTC+TGG 0.388414 1:+75622349 MsG0180004252.01.T01:CDS
ACCGTGATGCTGAGGCTGTT+CGG 0.390427 1:+75620821 MsG0180004252.01.T01:CDS
TTCTACCACGGAGCATAAAC+GGG 0.401435 1:+75619141 MsG0180004252.01.T01:CDS
GCTGGTGAGGCATATCTTCC+AGG 0.401989 1:+75622275 MsG0180004252.01.T01:CDS
TGTACAAGTAGTTGAACATC+AGG 0.410649 1:-75622311 None:intergenic
ACCATAAATTCACTGCACTT+TGG 0.416058 1:+75622234 MsG0180004252.01.T01:CDS
TGGTGTTGAGTATCCTTTGT+TGG 0.418687 1:+75619060 MsG0180004252.01.T01:CDS
CTGATACACAGGAGAATTGT+TGG 0.419083 1:+75623796 MsG0180004252.01.T01:intron
TTCATTTAGGTTCTGTGAGA+GGG 0.429000 1:+75620974 MsG0180004252.01.T01:intron
CGATCAAAATGATAGACTTC+AGG 0.437577 1:-75618968 None:intergenic
AATAAGAGGTAAACGTTGAT+TGG 0.439042 1:-75620559 None:intergenic
TCTCCTATGCAACGAACATA+TGG 0.446044 1:-75618863 None:intergenic
GCCATCTCCGACTTCTTTGA+CGG 0.448574 1:-75618695 None:intergenic
GACGCACATACTATAATAAG+AGG 0.455185 1:-75620573 None:intergenic
GATTCTTATCAAGACAGAAC+CGG 0.462783 1:+75620396 MsG0180004252.01.T01:CDS
AATGGTATTCCTGTAGCAAT+TGG 0.466163 1:+75620456 MsG0180004252.01.T01:CDS
AAGCCAAAATCAAGTTTCCT+AGG 0.467754 1:-75621118 None:intergenic
TTGAACCGCCTCCAGTAATC+CGG 0.468881 1:-75620415 None:intergenic
TTAAGACAATTGCAGACACT+TGG 0.472640 1:+75622201 MsG0180004252.01.T01:CDS
CAGTTTATGGGAGGTAGTAT+GGG 0.475011 1:+75620492 MsG0180004252.01.T01:CDS
GCGGGAATGTGGAGTTATGC+AGG 0.477746 1:+75620725 MsG0180004252.01.T01:CDS
TTTGATATCGGAGCATTCCT+AGG 0.479894 1:+75621101 MsG0180004252.01.T01:CDS
TTGCCATATGTTCGTTGCAT+AGG 0.482313 1:+75618860 MsG0180004252.01.T01:CDS
TATACTCAGAAACTTTATAT+GGG 0.482549 1:-75620774 None:intergenic
TTACTGGAGGCGGTTCAAAC+AGG 0.490170 1:+75620420 MsG0180004252.01.T01:CDS
CCACATATAATTCTCAGAAA+AGG 0.497279 1:+75619028 MsG0180004252.01.T01:CDS
TATAGCTGACGCTGGTAAGC+GGG 0.498814 1:+75623846 MsG0180004252.01.T01:CDS
TAGGTTCTGTGAGAGGGCTC+AGG 0.499778 1:+75620980 MsG0180004252.01.T01:intron
ATCAAGTGCCCGCCGTTCAC+AGG 0.500202 1:-75623872 None:intergenic
GTTCATTTAGGTTCTGTGAG+AGG 0.506829 1:+75620973 MsG0180004252.01.T01:intron
GACTTCTTTGACGGATAAGT+CGG 0.509303 1:-75618686 None:intergenic
GTTATGCAGGCTCACTGAGC+AGG 0.511628 1:+75620738 MsG0180004252.01.T01:CDS
TCGAGTTTGGATGAAAGTGC+AGG 0.512775 1:-75618652 None:intergenic
TTTGGATGAAAGTGCAGGGA+TGG 0.516292 1:-75618647 None:intergenic
AGGTAGTATGGGATCCGTAG+TGG 0.517873 1:+75620503 MsG0180004252.01.T01:CDS
TCCATAATACCAATTGCTAC+AGG 0.519930 1:-75620465 None:intergenic
AAGACATGCTATGTTACCAT+TGG 0.521066 1:+75620664 MsG0180004252.01.T01:intron
TAGACTTCAGGAACATGATC+AGG 0.522053 1:-75618956 None:intergenic
GCGGGCAACCTGTGAACGGC+GGG 0.522112 1:+75623864 MsG0180004252.01.T01:CDS
CAAATAAATAAATATGATGA+GGG 0.538041 1:-75619197 None:intergenic
GCAAATAAATAAATATGATG+AGG 0.540738 1:-75619198 None:intergenic
GATTTATTTCATGACAGTCT+GGG 0.544205 1:+75622350 MsG0180004252.01.T01:CDS
AATATGATGAGGGTATGAAA+AGG 0.547912 1:-75619187 None:intergenic
GTTTATGCTCCGTGGTAGAA+CGG 0.550540 1:-75619138 None:intergenic
TTTCTGAGAATTATATGTGG+TGG 0.552320 1:-75619025 None:intergenic
CAGCATCACGGTCAAGATGA+GGG 0.555661 1:-75620810 None:intergenic
GGTAGTATGGGATCCGTAGT+GGG 0.563237 1:+75620504 MsG0180004252.01.T01:CDS
TTATGCAGGCATATAAGGAA+TGG 0.565476 1:+75622174 MsG0180004252.01.T01:intron
TGTTGGTGTGGCACATGTTG+AGG 0.565977 1:+75623813 MsG0180004252.01.T01:CDS
TTCGTTGCATAGGAGAATCA+TGG 0.568476 1:+75618870 MsG0180004252.01.T01:CDS
AAGTTTCTGAGTATAATCGC+TGG 0.568636 1:+75620782 MsG0180004252.01.T01:CDS
GACAAAAGAACCGTTGGTGT+TGG 0.569843 1:-75618743 None:intergenic
GACTTATCCGTCAAAGAAGT+CGG 0.577212 1:+75618688 MsG0180004252.01.T01:CDS
GTCATTGGCGTTGAAAGAAG+AGG 0.581400 1:+75618922 MsG0180004252.01.T01:CDS
TCCGTCAAAGAAGTCGGAGA+TGG 0.584966 1:+75618694 MsG0180004252.01.T01:CDS
TTGGTGCTGCCAAAATGATA+AGG 0.586481 1:+75622375 MsG0180004252.01.T01:CDS
CAAGAATAACTTAAGACCAA+TGG 0.591335 1:-75620680 None:intergenic
TCAGCATCACGGTCAAGATG+AGG 0.591643 1:-75620811 None:intergenic
TCATCTTGACCGTGATGCTG+AGG 0.597607 1:+75620813 MsG0180004252.01.T01:CDS
GAGGCGGTTCAAACAGGCAC+AGG 0.602268 1:+75620426 MsG0180004252.01.T01:CDS
TTCATCGTTTCCAACACCAA+CGG 0.620059 1:+75618733 MsG0180004252.01.T01:CDS
GTAAGCGGGCAACCTGTGAA+CGG 0.620766 1:+75623860 MsG0180004252.01.T01:CDS
CTATAGCTGACGCTGGTAAG+CGG 0.621972 1:+75623845 MsG0180004252.01.T01:CDS
ACCATCCCGTTTATGCTCCG+TGG 0.623685 1:-75619146 None:intergenic
CCCGAACAGCCTCAGCATCA+CGG 0.629555 1:-75620822 None:intergenic
CAGAACCGGATTACTGGAGG+CGG 0.630058 1:+75620410 MsG0180004252.01.T01:CDS
AGCGGGCAACCTGTGAACGG+CGG 0.630893 1:+75623863 MsG0180004252.01.T01:CDS
GCTCCGATATCAAAACCCAT+TGG 0.631526 1:-75621092 None:intergenic
AGCATCACGGTCAAGATGAG+GGG 0.631550 1:-75620809 None:intergenic
CGAGTTTGGATGAAAGTGCA+GGG 0.636609 1:-75618651 None:intergenic
TCATTGGCGTTGAAAGAAGA+GGG 0.636857 1:+75618923 MsG0180004252.01.T01:CDS
TCTACACACTGGTTCTGTGA+TGG 0.638431 1:+75621019 MsG0180004252.01.T01:CDS
CTTGAATCTATAGCTGACGC+TGG 0.642125 1:+75623838 MsG0180004252.01.T01:CDS
TCTGCTTTACCGTTCTACCA+CGG 0.645741 1:+75619129 MsG0180004252.01.T01:CDS
ACCACGGAGCATAAACGGGA+TGG 0.648135 1:+75619145 MsG0180004252.01.T01:CDS
TTTGATGACAAAAGAACCGT+TGG 0.648397 1:-75618749 None:intergenic
AGGGCTCAGGCACTAATACA+CGG 0.649727 1:+75620993 MsG0180004252.01.T01:CDS
GACATGTGATCAGCCAACAA+AGG 0.649738 1:-75619073 None:intergenic
AAAGTGCAGTGAATTTATGG+TGG 0.659695 1:-75622232 None:intergenic
AGACAGAACCGGATTACTGG+AGG 0.687907 1:+75620407 MsG0180004252.01.T01:CDS
GTACAAGTAGTTGAACATCA+GGG 0.697761 1:-75622310 None:intergenic
TAGTGGGTGAGAAAATCACT+CGG 0.716421 1:+75620520 MsG0180004252.01.T01:CDS
ACACAGGAGAATTGTTGGTG+TGG 0.730427 1:+75623801 MsG0180004252.01.T01:intron
ATACACGGAGATCTACACAC+TGG 0.737182 1:+75621008 MsG0180004252.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATACATTTTAAGAATATT+TGG - Chr1:75619656-75619675 None:intergenic 10.0%
!! AAAAAGATAACACATTATAA+TGG + Chr1:75623495-75623514 MsG0180004252.01.T01:intron 15.0%
!! AAGAATATTAATTGTCTATA+AGG - Chr1:75620124-75620143 None:intergenic 15.0%
!! ATCTAAAAAAAAAAAAACAG+TGG + Chr1:75623604-75623623 MsG0180004252.01.T01:intron 15.0%
!! CAAATAAATAAATATGATGA+GGG - Chr1:75619200-75619219 None:intergenic 15.0%
!! CTAGTATTTATAGATTATAT+GGG + Chr1:75619918-75619937 MsG0180004252.01.T01:intron 15.0%
!! TAGTATTTATAGATTATATG+GGG + Chr1:75619919-75619938 MsG0180004252.01.T01:intron 15.0%
!! TCTAGTATTTATAGATTATA+TGG + Chr1:75619917-75619936 MsG0180004252.01.T01:intron 15.0%
!!! GTTGTTTTAATATATATTCA+CGG + Chr1:75622734-75622753 MsG0180004252.01.T01:intron 15.0%
!!! TTGAAGTTTTTATTTTACTT+TGG + Chr1:75621325-75621344 MsG0180004252.01.T01:intron 15.0%
!!! TTGTTTTATTTCACAAAAAA+AGG - Chr1:75619778-75619797 None:intergenic 15.0%
!! AAACATTAAATGCATGAAAA+AGG + Chr1:75619802-75619821 MsG0180004252.01.T01:intron 20.0%
!! AGTATTTATAGATTATATGG+GGG + Chr1:75619920-75619939 MsG0180004252.01.T01:intron 20.0%
!! ATGAAAGTTTATGTTCATTT+AGG + Chr1:75620961-75620980 MsG0180004252.01.T01:intron 20.0%
!! CTAATATTATCTGAAAAAGA+TGG - Chr1:75621903-75621922 None:intergenic 20.0%
!! GCAAATAAATAAATATGATG+AGG - Chr1:75619201-75619220 None:intergenic 20.0%
!! TATAAAAATTGTTTCATAGC+AGG + Chr1:75619671-75619690 MsG0180004252.01.T01:intron 20.0%
!! TATACTCAGAAACTTTATAT+GGG - Chr1:75620777-75620796 None:intergenic 20.0%
!! TTATACTCAGAAACTTTATA+TGG - Chr1:75620778-75620797 None:intergenic 20.0%
!!! AAGTTTTTATTTTACTTTGG+CGG + Chr1:75621328-75621347 MsG0180004252.01.T01:intron 20.0%
!!! ACTGTTTAATTTCACAATAA+CGG + Chr1:75622956-75622975 MsG0180004252.01.T01:intron 20.0%
!!! ATGTTTTAATTGGAACTAAT+TGG + Chr1:75623238-75623257 MsG0180004252.01.T01:intron 20.0%
!!! ATTATGGATTTTCAGTTTAT+GGG + Chr1:75620480-75620499 MsG0180004252.01.T01:CDS 20.0%
!!! TATATTTAAAGTTGTAGTAG+TGG + Chr1:75619698-75619717 MsG0180004252.01.T01:intron 20.0%
!!! TATCTTTTGTTATAGAAAGA+GGG - Chr1:75619425-75619444 None:intergenic 20.0%
!!! TATTATGGATTTTCAGTTTA+TGG + Chr1:75620479-75620498 MsG0180004252.01.T01:CDS 20.0%
!!! TTAAGCTTTTCATTTGAAAA+TGG + Chr1:75620070-75620089 MsG0180004252.01.T01:intron 20.0%
!!! TTATCTTTTGTTATAGAAAG+AGG - Chr1:75619426-75619445 None:intergenic 20.0%
!!! TTTTCAGCTTATTTTTGTTT+GGG - Chr1:75619545-75619564 None:intergenic 20.0%
!!! TTTTTTTTAGATAAGCGTAA+TGG - Chr1:75623596-75623615 None:intergenic 20.0%
! AAAGAAAGGAAATTTCAGAA+AGG + Chr1:75621621-75621640 MsG0180004252.01.T01:intron 25.0%
! AATTGATATGCTCTGATATA+GGG - Chr1:75623475-75623494 None:intergenic 25.0%
! ACAATCATTAGAGAGATAAA+TGG + Chr1:75622518-75622537 MsG0180004252.01.T01:intron 25.0%
! ACTATAAATAAGACAAGACA+AGG - Chr1:75623360-75623379 None:intergenic 25.0%
! AGCCAATGAGATATTAAAAT+GGG - Chr1:75623129-75623148 None:intergenic 25.0%
! ATCCACTGTTAAAAAAATCA+TGG - Chr1:75623572-75623591 None:intergenic 25.0%
! ATTTCAATTATCTGATACAC+AGG + Chr1:75623785-75623804 MsG0180004252.01.T01:intron 25.0%
! CAACTGATAAAACAATTCAA+CGG - Chr1:75623051-75623070 None:intergenic 25.0%
! CAGAATAGAATGAAAAGAAT+GGG - Chr1:75621218-75621237 None:intergenic 25.0%
! CTCAAATAAGTCAATTCAAA+TGG + Chr1:75620021-75620040 MsG0180004252.01.T01:intron 25.0%
! CTTCAATTGTTACTAGTATT+GGG - Chr1:75621935-75621954 None:intergenic 25.0%
! GTATTTATAGATTATATGGG+GGG + Chr1:75619921-75619940 MsG0180004252.01.T01:intron 25.0%
! TAATTGATATGCTCTGATAT+AGG - Chr1:75623476-75623495 None:intergenic 25.0%
! TAGTTCCAATTAAAACATTG+TGG - Chr1:75623236-75623255 None:intergenic 25.0%
! TATAGAAACTCAAAGTTTGA+TGG - Chr1:75622134-75622153 None:intergenic 25.0%
! TCAGAATAGAATGAAAAGAA+TGG - Chr1:75621219-75621238 None:intergenic 25.0%
! TCTTCAATTGTTACTAGTAT+TGG - Chr1:75621936-75621955 None:intergenic 25.0%
! TGTGTATCAGATAATTGAAA+TGG - Chr1:75623786-75623805 None:intergenic 25.0%
!! AAATTTCCTTTCTTTGTTTG+TGG - Chr1:75621616-75621635 None:intergenic 25.0%
!! AACTAAGAGCTTAAACTTTT+AGG + Chr1:75622764-75622783 MsG0180004252.01.T01:intron 25.0%
!! CCAGCATATGATATATTTTA+GGG + Chr1:75622000-75622019 MsG0180004252.01.T01:intron 25.0%
!! TCCAGCATATGATATATTTT+AGG + Chr1:75621999-75622018 MsG0180004252.01.T01:intron 25.0%
!! TGATAATCATCATTTTCAGA+AGG - Chr1:75620366-75620385 None:intergenic 25.0%
!! TGATGTCTTTTTGTTACATA+AGG - Chr1:75619852-75619871 None:intergenic 25.0%
!! TTAACCTTCTGAAAATAGTT+CGG + Chr1:75620332-75620351 MsG0180004252.01.T01:intron 25.0%
!!! AATGCAGTAGTTTTGTTTTT+TGG + Chr1:75620928-75620947 MsG0180004252.01.T01:intron 25.0%
!!! AATTGAGCTTGTTTTTGTAT+TGG + Chr1:75619294-75619313 MsG0180004252.01.T01:intron 25.0%
!!! ATGCAGTAGTTTTGTTTTTT+GGG + Chr1:75620929-75620948 MsG0180004252.01.T01:intron 25.0%
!!! ATTTTTTATGGACAGAGATT+AGG - Chr1:75623741-75623760 None:intergenic 25.0%
!!! GCTTAAACTTTTAGGATAAT+TGG + Chr1:75622772-75622791 MsG0180004252.01.T01:intron 25.0%
!!! GTTTTCAGCTTATTTTTGTT+TGG - Chr1:75619546-75619565 None:intergenic 25.0%
!!! TGATTTGCTTTGTTCTTATT+AGG + Chr1:75619355-75619374 MsG0180004252.01.T01:intron 25.0%
!!! TGTTTTTGTATTGGAAACAT+TGG + Chr1:75619303-75619322 MsG0180004252.01.T01:intron 25.0%
!!! TTATTTTGAAACTTTCAGTC+AGG + Chr1:75623434-75623453 MsG0180004252.01.T01:intron 25.0%
!!! TTTCAGTTTTTTCTTTGTTG+AGG + Chr1:75622099-75622118 MsG0180004252.01.T01:intron 25.0%
AAACGATGAAGACGAAATTA+AGG - Chr1:75618723-75618742 None:intergenic 30.0%
AACAAGCTCAATTGAATTTC+AGG - Chr1:75619287-75619306 None:intergenic 30.0%
AACCCATAAATCATAAGCAT+GGG - Chr1:75622492-75622511 None:intergenic 30.0%
AACGACTCAAATACTTACTA+AGG - Chr1:75620049-75620068 None:intergenic 30.0%
AATAAGAGGTAAACGTTGAT+TGG - Chr1:75620562-75620581 None:intergenic 30.0%
AATTATAGTGAGAGATTACG+AGG + Chr1:75622619-75622638 MsG0180004252.01.T01:intron 30.0%
ACAAGCTCAATTGAATTTCA+GGG - Chr1:75619286-75619305 None:intergenic 30.0%
ACATGATAGAGTAATTCTCA+TGG + Chr1:75621963-75621982 MsG0180004252.01.T01:intron 30.0%
ACGACTCAAATACTTACTAA+GGG - Chr1:75620048-75620067 None:intergenic 30.0%
ACTAGTAACAATTGAAGACT+TGG + Chr1:75621938-75621957 MsG0180004252.01.T01:intron 30.0%
AGATTTATTTCATGACAGTC+TGG + Chr1:75622349-75622368 MsG0180004252.01.T01:CDS 30.0%
AGTTTCTATTGTCGAAAAGA+TGG + Chr1:75622544-75622563 MsG0180004252.01.T01:intron 30.0%
ATAGTAACATATAACCCACA+TGG + Chr1:75620150-75620169 MsG0180004252.01.T01:intron 30.0%
ATCATATATATTGCATGCGT+CGG - Chr1:75619884-75619903 None:intergenic 30.0%
ATCTGTATATGTGTGAATAC+AGG + Chr1:75623292-75623311 MsG0180004252.01.T01:intron 30.0%
ATGATATCCCAAAGATATGT+AGG - Chr1:75621388-75621407 None:intergenic 30.0%
ATTGATATGCTCTGATATAG+GGG - Chr1:75623474-75623493 None:intergenic 30.0%
CAAGAATAACTTAAGACCAA+TGG - Chr1:75620683-75620702 None:intergenic 30.0%
CAATAAAGACATGGAAAAAG+AGG - Chr1:75621194-75621213 None:intergenic 30.0%
CAGCCAATGAGATATTAAAA+TGG - Chr1:75623130-75623149 None:intergenic 30.0%
CATACTAGAATTTAGTCTAC+AGG - Chr1:75623327-75623346 None:intergenic 30.0%
CATTAAATGCATGAAAAAGG+AGG + Chr1:75619805-75619824 MsG0180004252.01.T01:intron 30.0%
CCACATATAATTCTCAGAAA+AGG + Chr1:75619028-75619047 MsG0180004252.01.T01:CDS 30.0%
CCCTAAAATATATCATATGC+TGG - Chr1:75622003-75622022 None:intergenic 30.0%
GATTTATTTCATGACAGTCT+GGG + Chr1:75622350-75622369 MsG0180004252.01.T01:CDS 30.0%
GTTACTAGACATATATTTGC+TGG + Chr1:75621243-75621262 MsG0180004252.01.T01:intron 30.0%
GTTTAAGCTTATCGAATAGA+TGG + Chr1:75622895-75622914 MsG0180004252.01.T01:intron 30.0%
TAACCCATAAATCATAAGCA+TGG - Chr1:75622493-75622512 None:intergenic 30.0%
TAGATCTCTATCTCTAGTTA+TGG + Chr1:75621294-75621313 MsG0180004252.01.T01:intron 30.0%
TAGTAACATATAACCCACAT+GGG + Chr1:75620151-75620170 MsG0180004252.01.T01:intron 30.0%
TATTTACTCACCAATCAAAC+TGG + Chr1:75623078-75623097 MsG0180004252.01.T01:intron 30.0%
TCCTAAAAACTAGTCAATGT+AGG - Chr1:75622065-75622084 None:intergenic 30.0%
TCTCTGTCCATAAAAAATTG+AGG + Chr1:75623743-75623762 MsG0180004252.01.T01:intron 30.0%
TCTGTATATGTGTGAATACA+GGG + Chr1:75623293-75623312 MsG0180004252.01.T01:intron 30.0%
TGTTCTTATTAGGCTATGTT+TGG + Chr1:75619365-75619384 MsG0180004252.01.T01:intron 30.0%
TTCTCTGAATTAGGATAACA+AGG - Chr1:75621527-75621546 None:intergenic 30.0%
TTGTTATCCTAATTCAGAGA+AGG + Chr1:75621526-75621545 MsG0180004252.01.T01:intron 30.0%
TTTAACACACTATGTTATGC+AGG + Chr1:75622160-75622179 MsG0180004252.01.T01:intron 30.0%
TTTGATTGGTATGCGTTATT+TGG + Chr1:75619000-75619019 MsG0180004252.01.T01:CDS 30.0%
! AAAGAGACACCTTATCATTT+TGG - Chr1:75622387-75622406 None:intergenic 30.0%
! AATATGATGAGGGTATGAAA+AGG - Chr1:75619190-75619209 None:intergenic 30.0%
! ATACATTTTTCCACAAGGTA+GGG - Chr1:75622710-75622729 None:intergenic 30.0%
! ATTACCATGTGTTCTTCTTT+TGG + Chr1:75623545-75623564 MsG0180004252.01.T01:intron 30.0%
! ATTCCTAGGAAACTTGATTT+TGG + Chr1:75621115-75621134 MsG0180004252.01.T01:CDS 30.0%
! ATTTGCATTTTATGGACCAA+TGG + Chr1:75621076-75621095 MsG0180004252.01.T01:CDS 30.0%
! CATGATATCGTCTTTGTTTA+TGG - Chr1:75621713-75621732 None:intergenic 30.0%
! CTATTTTCAGAAGGTTAATC+CGG - Chr1:75620330-75620349 None:intergenic 30.0%
! CTCTTTTTCCATGTCTTTAT+TGG + Chr1:75621192-75621211 MsG0180004252.01.T01:intron 30.0%
! GATCCTGAATTTGCATTTTA+TGG + Chr1:75621068-75621087 MsG0180004252.01.T01:CDS 30.0%
! GATTTTCATTGCATTGTTGT+AGG + Chr1:75618835-75618854 MsG0180004252.01.T01:intron 30.0%
! GCTTTTCATTTGAAAATGGA+TGG + Chr1:75620074-75620093 MsG0180004252.01.T01:intron 30.0%
! TATGCATCAGATTTTTCACA+TGG - Chr1:75621591-75621610 None:intergenic 30.0%
! TATTTTCAGAAGGTTAATCC+GGG - Chr1:75620329-75620348 None:intergenic 30.0%
! TGATCACATGTCTGATTTTA+TGG + Chr1:75619084-75619103 MsG0180004252.01.T01:CDS 30.0%
! TTAATTTCACAATAACGGAG+AGG + Chr1:75622961-75622980 MsG0180004252.01.T01:intron 30.0%
! TTGAAGAAGAGATGAAGTTT+TGG - Chr1:75618785-75618804 None:intergenic 30.0%
! TTTCTGAGAATTATATGTGG+TGG - Chr1:75619028-75619047 None:intergenic 30.0%
! TTTGCATTTTATGGACCAAT+GGG + Chr1:75621077-75621096 MsG0180004252.01.T01:CDS 30.0%
!! AACCTATTTATTTTTCCTGG+AGG - Chr1:75623672-75623691 None:intergenic 30.0%
!! AAGAGCATATTTTGAGTCAT+TGG + Chr1:75618907-75618926 MsG0180004252.01.T01:CDS 30.0%
!! ATCGAATAGATGGTCATTTT+TGG + Chr1:75622905-75622924 MsG0180004252.01.T01:intron 30.0%
!! ATTTTAGGGAATCAACATTG+TGG + Chr1:75622014-75622033 MsG0180004252.01.T01:intron 30.0%
!! CATTTTAATATCTCATTGGC+TGG + Chr1:75623128-75623147 MsG0180004252.01.T01:intron 30.0%
!! CCTTTTCTGAGAATTATATG+TGG - Chr1:75619031-75619050 None:intergenic 30.0%
!! CTCCCATTTTAATATCTCAT+TGG + Chr1:75623124-75623143 MsG0180004252.01.T01:intron 30.0%
!! TGGAACCTATTTATTTTTCC+TGG - Chr1:75623675-75623694 None:intergenic 30.0%
!! TTTTTAAAAAACTCGCATCC+AGG - Chr1:75620604-75620623 None:intergenic 30.0%
!!! ATGGTCCACAATGTTTTAAT+TGG + Chr1:75623228-75623247 MsG0180004252.01.T01:intron 30.0%
!!! GACCATGATTTTTTTAACAG+TGG + Chr1:75623567-75623586 MsG0180004252.01.T01:intron 30.0%
!!! TCCTACATTGACTAGTTTTT+AGG + Chr1:75622061-75622080 MsG0180004252.01.T01:intron 30.0%
AAAGTGCAGTGAATTTATGG+TGG - Chr1:75622235-75622254 None:intergenic 35.0%
AAGACATGCTATGTTACCAT+TGG + Chr1:75620664-75620683 MsG0180004252.01.T01:intron 35.0%
AAGCAGTCCTACATATCTTT+GGG + Chr1:75621378-75621397 MsG0180004252.01.T01:intron 35.0%
AAGCCAAAATCAAGTTTCCT+AGG - Chr1:75621121-75621140 None:intergenic 35.0%
AAGTTTCTGAGTATAATCGC+TGG + Chr1:75620782-75620801 MsG0180004252.01.T01:CDS 35.0%
AATGGTATTCCTGTAGCAAT+TGG + Chr1:75620456-75620475 MsG0180004252.01.T01:CDS 35.0%
ACCATAAATTCACTGCACTT+TGG + Chr1:75622234-75622253 MsG0180004252.01.T01:CDS 35.0%
ACTTATTTGAGCTTACCTAC+TGG - Chr1:75620012-75620031 None:intergenic 35.0%
AGAGAGAATGGTAGTATAAG+GGG - Chr1:75621757-75621776 None:intergenic 35.0%
ATGCCCATGCTTATGATTTA+TGG + Chr1:75622486-75622505 MsG0180004252.01.T01:intron 35.0%
ATTGTCTATAAGGCACAAGA+AGG - Chr1:75620114-75620133 None:intergenic 35.0%
CAAGCAAACGATAGAAAAGT+AGG + Chr1:75621167-75621186 MsG0180004252.01.T01:intron 35.0%
CAAGGCTTAATGTCAAAGTA+TGG + Chr1:75623209-75623228 MsG0180004252.01.T01:intron 35.0%
CATAAGCCACAAACAAAGAA+AGG + Chr1:75621607-75621626 MsG0180004252.01.T01:intron 35.0%
CCATAAATTCACTGCACTTT+GGG + Chr1:75622235-75622254 MsG0180004252.01.T01:CDS 35.0%
CGAATAGACTTGTGGAATTT+GGG + Chr1:75621855-75621874 MsG0180004252.01.T01:intron 35.0%
CGATCAAAATGATAGACTTC+AGG - Chr1:75618971-75618990 None:intergenic 35.0%
CTACCTTGTGGAAAAATGTA+TGG + Chr1:75622709-75622728 MsG0180004252.01.T01:intron 35.0%
CTATGTTATGCAGGCATATA+AGG + Chr1:75622169-75622188 MsG0180004252.01.T01:intron 35.0%
GAATAGACTTGTGGAATTTG+GGG + Chr1:75621856-75621875 MsG0180004252.01.T01:intron 35.0%
GACGCACATACTATAATAAG+AGG - Chr1:75620576-75620595 None:intergenic 35.0%
GAGAGAGAATGGTAGTATAA+GGG - Chr1:75621758-75621777 None:intergenic 35.0%
GAGGTCAATGATCTATCTTT+AGG + Chr1:75622638-75622657 MsG0180004252.01.T01:intron 35.0%
GATCGTACTATGTCTTTGAT+TGG + Chr1:75618986-75619005 MsG0180004252.01.T01:CDS 35.0%
GATTCTTATCAAGACAGAAC+CGG + Chr1:75620396-75620415 MsG0180004252.01.T01:CDS 35.0%
GGATAACAAGGAACTAGTTA+TGG - Chr1:75621515-75621534 None:intergenic 35.0%
GGTCCATAAAATGCAAATTC+AGG - Chr1:75621074-75621093 None:intergenic 35.0%
GTACAAGTAGTTGAACATCA+GGG - Chr1:75622313-75622332 None:intergenic 35.0%
TAAGCAGTCCTACATATCTT+TGG + Chr1:75621377-75621396 MsG0180004252.01.T01:intron 35.0%
TACTTTGACATTAAGCCTTG+TGG - Chr1:75623209-75623228 None:intergenic 35.0%
TAGAGCGGAAAAAAGTAGTT+AGG - Chr1:75621815-75621834 None:intergenic 35.0%
TATGCTCTTTCTTTCGTCAT+TGG - Chr1:75618896-75618915 None:intergenic 35.0%
TATGTGTGAATACAGGGTAA+TGG + Chr1:75623299-75623318 MsG0180004252.01.T01:intron 35.0%
TATTATAGTATGTGCGTCGT+TGG + Chr1:75620578-75620597 MsG0180004252.01.T01:intron 35.0%
TCCATAATACCAATTGCTAC+AGG - Chr1:75620468-75620487 None:intergenic 35.0%
TCCTGTAGCAATTGGTATTA+TGG + Chr1:75620464-75620483 MsG0180004252.01.T01:CDS 35.0%
TGCCCATGCTTATGATTTAT+GGG + Chr1:75622487-75622506 MsG0180004252.01.T01:intron 35.0%
TGGTAACATAGCATGTCTTA+AGG - Chr1:75620663-75620682 None:intergenic 35.0%
TGTACAAGTAGTTGAACATC+AGG - Chr1:75622314-75622333 None:intergenic 35.0%
TTAAGACAATTGCAGACACT+TGG + Chr1:75622201-75622220 MsG0180004252.01.T01:CDS 35.0%
TTATGCAGGCATATAAGGAA+TGG + Chr1:75622174-75622193 MsG0180004252.01.T01:intron 35.0%
TTGTTTATGGCATATGCCTT+GGG - Chr1:75621700-75621719 None:intergenic 35.0%
TTTGTTTATGGCATATGCCT+TGG - Chr1:75621701-75621720 None:intergenic 35.0%
! ACTAGACATATATTTGCTGG+TGG + Chr1:75621246-75621265 MsG0180004252.01.T01:intron 35.0%
! ATCAGTGTTTTCTCGTTTAG+AGG - Chr1:75618613-75618632 None:intergenic 35.0%
! ATGGATTTTCAGTTTATGGG+AGG + Chr1:75620483-75620502 MsG0180004252.01.T01:CDS 35.0%
! ATTTTCAGAAGGTTAATCCG+GGG - Chr1:75620328-75620347 None:intergenic 35.0%
! CAACCATACATTTTTCCACA+AGG - Chr1:75622715-75622734 None:intergenic 35.0%
! CATACATTTTTCCACAAGGT+AGG - Chr1:75622711-75622730 None:intergenic 35.0%
! CTACAAAATTTTGCACCATG+AGG - Chr1:75620240-75620259 None:intergenic 35.0%
! CTCATGGTGCAAAATTTTGT+AGG + Chr1:75620238-75620257 MsG0180004252.01.T01:intron 35.0%
! TCTTCCGAACTATTTTCAGA+AGG - Chr1:75620339-75620358 None:intergenic 35.0%
! TTCATTTAGGTTCTGTGAGA+GGG + Chr1:75620974-75620993 MsG0180004252.01.T01:intron 35.0%
! TTTGATGACAAAAGAACCGT+TGG - Chr1:75618752-75618771 None:intergenic 35.0%
!! CTTTGGGATGAGCATAAAAA+TGG + Chr1:75622251-75622270 MsG0180004252.01.T01:CDS 35.0%
!! GTTCTGGTGTTATATTCACT+AGG + Chr1:75623646-75623665 MsG0180004252.01.T01:intron 35.0%
!!! CGTGACACCTCAATTTTTTA+TGG - Chr1:75623753-75623772 None:intergenic 35.0%
!!! GATTTTGGCTTTCTTTTCTC+AGG + Chr1:75621130-75621149 MsG0180004252.01.T01:CDS 35.0%
!!! TACTTTGGCGGATTTTTACA+TGG + Chr1:75621340-75621359 MsG0180004252.01.T01:intron 35.0%
AAACTTTCAGTCAGGTTCAG+TGG + Chr1:75623442-75623461 MsG0180004252.01.T01:intron 40.0%
AACTTTCAGTCAGGTTCAGT+GGG + Chr1:75623443-75623462 MsG0180004252.01.T01:intron 40.0%
AAGAAAGCTTCTTCCATAGC+TGG - Chr1:75621676-75621695 None:intergenic 40.0%
AAGACAAGACAAGGAAGTGA+AGG - Chr1:75623351-75623370 None:intergenic 40.0%
AATGGTAGTATAAGGGGTCA+AGG - Chr1:75621751-75621770 None:intergenic 40.0%
ACAAGGTAGGGTCAATTACA+TGG - Chr1:75622698-75622717 None:intergenic 40.0%
ACGGATTCCTTCTCTGAATT+AGG - Chr1:75621536-75621555 None:intergenic 40.0%
AGAAAGCTTCTTCCATAGCT+GGG - Chr1:75621675-75621694 None:intergenic 40.0%
AGAATGGGCCAATAAAGACA+TGG - Chr1:75621203-75621222 None:intergenic 40.0%
AGTTGAACACAACCAACCAA+GGG - Chr1:75619745-75619764 None:intergenic 40.0%
ATGCTCAAACAAGAGCTCTT+TGG - Chr1:75622838-75622857 None:intergenic 40.0%
ATGGTAGTATAAGGGGTCAA+GGG - Chr1:75621750-75621769 None:intergenic 40.0%
ATGTAATTGACCCTACCTTG+TGG + Chr1:75622697-75622716 MsG0180004252.01.T01:intron 40.0%
CAATTGACAACCACACATCA+AGG - Chr1:75619331-75619350 None:intergenic 40.0%
CAGTTTATGGGAGGTAGTAT+GGG + Chr1:75620492-75620511 MsG0180004252.01.T01:CDS 40.0%
CCAGAACAAAAGATGCGTAA+TGG - Chr1:75623633-75623652 None:intergenic 40.0%
CCCAAAGTGCAGTGAATTTA+TGG - Chr1:75622238-75622257 None:intergenic 40.0%
CTCAGAAAAGGTTTGATTGC+TGG + Chr1:75619040-75619059 MsG0180004252.01.T01:CDS 40.0%
CTGATACACAGGAGAATTGT+TGG + Chr1:75623796-75623815 MsG0180004252.01.T01:intron 40.0%
GACTTATCCGTCAAAGAAGT+CGG + Chr1:75618688-75618707 MsG0180004252.01.T01:CDS 40.0%
GATGAGCATAAAAATGGTGC+TGG + Chr1:75622257-75622276 MsG0180004252.01.T01:CDS 40.0%
GCGAATAGACTTGTGGAATT+TGG + Chr1:75621854-75621873 MsG0180004252.01.T01:intron 40.0%
GCTCTTTGGACTTGATTACT+TGG - Chr1:75622824-75622843 None:intergenic 40.0%
GGAGAAATTGTTGTCGAGTT+TGG - Chr1:75618668-75618687 None:intergenic 40.0%
GGAGAGAGAATGGTAGTATA+AGG - Chr1:75621759-75621778 None:intergenic 40.0%
GGCCTCCAGGAAAAATAAAT+AGG + Chr1:75623667-75623686 MsG0180004252.01.T01:intron 40.0%
GTAAGTACTTGTGAGACTCA+GGG - Chr1:75619982-75620001 None:intergenic 40.0%
GTACTTACAGTTATGCCAGT+AGG + Chr1:75619994-75620013 MsG0180004252.01.T01:intron 40.0%
GTTCTCATACTTTGTCTGCA+TGG + Chr1:75621486-75621505 MsG0180004252.01.T01:intron 40.0%
TAAGTACTTGTGAGACTCAG+GGG - Chr1:75619981-75620000 None:intergenic 40.0%
TAATTCAGAGAAGGAATCCG+TGG + Chr1:75621535-75621554 MsG0180004252.01.T01:intron 40.0%
TAGACTTCAGGAACATGATC+AGG - Chr1:75618959-75618978 None:intergenic 40.0%
TATGGACAGAGATTAGGTCA+GGG - Chr1:75623735-75623754 None:intergenic 40.0%
TCAGGGTTGTTATAGATTCC+TGG - Chr1:75622296-75622315 None:intergenic 40.0%
TCAGTTTATGGGAGGTAGTA+TGG + Chr1:75620491-75620510 MsG0180004252.01.T01:CDS 40.0%
TCTCCTATGCAACGAACATA+TGG - Chr1:75618866-75618885 None:intergenic 40.0%
TGGTCCAAAAGAAGAACACA+TGG - Chr1:75623552-75623571 None:intergenic 40.0%
TGTAAGTACTTGTGAGACTC+AGG - Chr1:75619983-75620002 None:intergenic 40.0%
TTATGGACAGAGATTAGGTC+AGG - Chr1:75623736-75623755 None:intergenic 40.0%
TTCATCGTTTCCAACACCAA+CGG + Chr1:75618733-75618752 MsG0180004252.01.T01:CDS 40.0%
TTCGTTGCATAGGAGAATCA+TGG + Chr1:75618870-75618889 MsG0180004252.01.T01:CDS 40.0%
TTGCCATATGTTCGTTGCAT+AGG + Chr1:75618860-75618879 MsG0180004252.01.T01:CDS 40.0%
! AGTGATTTTCTCACCCACTA+CGG - Chr1:75620520-75620539 None:intergenic 40.0%
! AGTTTTGCTGACCTCTTTTG+TGG + Chr1:75623177-75623196 MsG0180004252.01.T01:intron 40.0%
! ATGCAGTTGCTGAATTTTGC+GGG + Chr1:75620707-75620726 MsG0180004252.01.T01:CDS 40.0%
! CATGCAGTTGCTGAATTTTG+CGG + Chr1:75620706-75620725 MsG0180004252.01.T01:CDS 40.0%
! CCATTACGCATCTTTTGTTC+TGG + Chr1:75623630-75623649 MsG0180004252.01.T01:intron 40.0%
! CGGTTCTTTTGTCATCAAAC+AGG + Chr1:75618753-75618772 MsG0180004252.01.T01:CDS 40.0%
! CTTGACATGAACAGGTGTTT+TGG - Chr1:75623695-75623714 None:intergenic 40.0%
! GACTTCTTTGACGGATAAGT+CGG - Chr1:75618689-75618708 None:intergenic 40.0%
! GTTCATTTAGGTTCTGTGAG+AGG + Chr1:75620973-75620992 MsG0180004252.01.T01:intron 40.0%
! TAGTGGGTGAGAAAATCACT+CGG + Chr1:75620520-75620539 MsG0180004252.01.T01:CDS 40.0%
! TCATTGGCGTTGAAAGAAGA+GGG + Chr1:75618923-75618942 MsG0180004252.01.T01:CDS 40.0%
! TGGTGTTGAGTATCCTTTGT+TGG + Chr1:75619060-75619079 MsG0180004252.01.T01:CDS 40.0%
! TTTCATGACAGTCTGGGATT+TGG + Chr1:75622356-75622375 MsG0180004252.01.T01:CDS 40.0%
! TTTGATATCGGAGCATTCCT+AGG + Chr1:75621101-75621120 MsG0180004252.01.T01:CDS 40.0%
! TTTTCAGAAGGTTAATCCGG+GGG - Chr1:75620327-75620346 None:intergenic 40.0%
!! AACATTGGTTCCTTGATGTG+TGG + Chr1:75619318-75619337 MsG0180004252.01.T01:intron 40.0%
!! AAGCTTGCTCTGGCTTTAAA+TGG + Chr1:75620273-75620292 MsG0180004252.01.T01:intron 40.0%
!! AGCTTGCTCTGGCTTTAAAT+GGG + Chr1:75620274-75620293 MsG0180004252.01.T01:intron 40.0%
!! AGTGGTTTAGCTTGCTTAAG+TGG + Chr1:75619716-75619735 MsG0180004252.01.T01:intron 40.0%
!! ATCTCATTGGCTGGTGATTT+TGG + Chr1:75623137-75623156 MsG0180004252.01.T01:intron 40.0%
!! GATGCTTTCAAGCACTGAAT+TGG - Chr1:75619256-75619275 None:intergenic 40.0%
!! GGACCAATGGGTTTTGATAT+CGG + Chr1:75621089-75621108 MsG0180004252.01.T01:CDS 40.0%
!! TTGGCTTTCTTTTCTCAGGA+TGG + Chr1:75621134-75621153 MsG0180004252.01.T01:CDS 40.0%
!! TTGGTGCTGCCAAAATGATA+AGG + Chr1:75622375-75622394 MsG0180004252.01.T01:CDS 40.0%
!!! ACTACTTTTTTCCGCTCTAC+TGG + Chr1:75621816-75621835 MsG0180004252.01.T01:intron 40.0%
AATGGGAGCAATGAATGCAG+AGG - Chr1:75623112-75623131 None:intergenic 45.0%
AATTCCACGGTCCATTAGTG+GGG - Chr1:75620301-75620320 None:intergenic 45.0%
ACACAGGAGAATTGTTGGTG+TGG + Chr1:75623801-75623820 MsG0180004252.01.T01:intron 45.0%
ACAGGCACAGGTCAAGTAAA+TGG + Chr1:75620438-75620457 MsG0180004252.01.T01:CDS 45.0%
ACTCTGGACTTGACATGAAC+AGG - Chr1:75623703-75623722 None:intergenic 45.0%
ACTTTCAGTCAGGTTCAGTG+GGG + Chr1:75623444-75623463 MsG0180004252.01.T01:intron 45.0%
ATACACGGAGATCTACACAC+TGG + Chr1:75621008-75621027 MsG0180004252.01.T01:CDS 45.0%
ATATATTGCATGCGTCGGAG+TGG - Chr1:75619879-75619898 None:intergenic 45.0%
CAATTCCACGGTCCATTAGT+GGG - Chr1:75620302-75620321 None:intergenic 45.0%
CTTGAATCTATAGCTGACGC+TGG + Chr1:75623838-75623857 MsG0180004252.01.T01:CDS 45.0%
CTTGAGAGGATCACATTCCA+AGG - Chr1:75620202-75620221 None:intergenic 45.0%
CTTGGAATGTGATCCTCTCA+AGG + Chr1:75620200-75620219 MsG0180004252.01.T01:intron 45.0%
GACAAAAGAACCGTTGGTGT+TGG - Chr1:75618746-75618765 None:intergenic 45.0%
GACATGTGATCAGCCAACAA+AGG - Chr1:75619076-75619095 None:intergenic 45.0%
GAGTTGAACACAACCAACCA+AGG - Chr1:75619746-75619765 None:intergenic 45.0%
GCTCCGATATCAAAACCCAT+TGG - Chr1:75621095-75621114 None:intergenic 45.0%
GGAGACGATACCAGTTTGAT+TGG - Chr1:75623091-75623110 None:intergenic 45.0%
GGTCAAGGGTTGTTCACATA+AGG - Chr1:75621736-75621755 None:intergenic 45.0%
GTTATATTCACTAGGCCTCC+AGG + Chr1:75623654-75623673 MsG0180004252.01.T01:intron 45.0%
GTTCTACCACGGAGCATAAA+CGG + Chr1:75619140-75619159 MsG0180004252.01.T01:CDS 45.0%
GTTGAACACAACCAACCAAG+GGG - Chr1:75619744-75619763 None:intergenic 45.0%
GTTTATGCTCCGTGGTAGAA+CGG - Chr1:75619141-75619160 None:intergenic 45.0%
TCAAGACAGAACCGGATTAC+TGG + Chr1:75620404-75620423 MsG0180004252.01.T01:CDS 45.0%
TCAATTCCACGGTCCATTAG+TGG - Chr1:75620303-75620322 None:intergenic 45.0%
TCTGCTTTACCGTTCTACCA+CGG + Chr1:75619129-75619148 MsG0180004252.01.T01:CDS 45.0%
TGTTCGACGTGCAGAGTAAT+GGG - Chr1:75621780-75621799 None:intergenic 45.0%
TTCCACAAGTCTATTCGCAC+AGG - Chr1:75621852-75621871 None:intergenic 45.0%
TTCTACCACGGAGCATAAAC+GGG + Chr1:75619141-75619160 MsG0180004252.01.T01:CDS 45.0%
TTTAAATGGGCCCCCACTAA+TGG + Chr1:75620287-75620306 MsG0180004252.01.T01:intron 45.0%
! AAGCCAGAGCAAGCTTTGTA+TGG - Chr1:75620269-75620288 None:intergenic 45.0%
! AGTCCATACAAAGCTTGCTC+TGG + Chr1:75620263-75620282 MsG0180004252.01.T01:intron 45.0%
! ATCTTGGCTGATTTCGTCAG+GGG + Chr1:75619628-75619647 MsG0180004252.01.T01:intron 45.0%
! CAGAGTAATGGGAGAGAGAA+TGG - Chr1:75621769-75621788 None:intergenic 45.0%
! CGAGTTTGGATGAAAGTGCA+GGG - Chr1:75618654-75618673 None:intergenic 45.0%
! GATCTTGGCTGATTTCGTCA+GGG + Chr1:75619627-75619646 MsG0180004252.01.T01:intron 45.0%
! GCGGATTTTTACATGGAAGC+TGG + Chr1:75621347-75621366 MsG0180004252.01.T01:intron 45.0%
! GGTTGGTTGTGTTCAACTCT+TGG + Chr1:75619747-75619766 MsG0180004252.01.T01:intron 45.0%
! GTCATTGGCGTTGAAAGAAG+AGG + Chr1:75618922-75618941 MsG0180004252.01.T01:CDS 45.0%
! TCGAGTTTGGATGAAAGTGC+AGG - Chr1:75618655-75618674 None:intergenic 45.0%
! TGCTGAATTTTGCGGGAATG+TGG + Chr1:75620714-75620733 MsG0180004252.01.T01:CDS 45.0%
! TTTGGATGAAAGTGCAGGGA+TGG - Chr1:75618650-75618669 None:intergenic 45.0%
!! AGATTATATGGGGGGTACCA+TGG + Chr1:75619929-75619948 MsG0180004252.01.T01:intron 45.0%
!! GCATAAAAATGGTGCTGGTG+AGG + Chr1:75622262-75622281 MsG0180004252.01.T01:CDS 45.0%
!! TCTACACACTGGTTCTGTGA+TGG + Chr1:75621019-75621038 MsG0180004252.01.T01:CDS 45.0%
!! AAATTATAATAAAGAATATT+TGG - Chr1:75623017-75623036 None:intergenic 5.0%
!! TTAATAAAAATAATAATATG+AGG + Chr1:75622430-75622449 MsG0180004252.01.T01:intron 5.0%
!!! ATTATTATTTTTATTAAAAG+AGG - Chr1:75622427-75622446 None:intergenic 5.0%
AAGAGTAGACCTCCCAGCTA+TGG + Chr1:75621660-75621679 MsG0180004252.01.T01:intron 50.0%
AAGCTTCTTCCATAGCTGGG+AGG - Chr1:75621672-75621691 None:intergenic 50.0%
AATCCGGGGGATCAATTCCA+CGG - Chr1:75620314-75620333 None:intergenic 50.0%
ACAGAGATTAGGTCAGGGCA+CGG - Chr1:75623730-75623749 None:intergenic 50.0%
ACTCAGGGGCGGATCTTAAT+AGG - Chr1:75619967-75619986 None:intergenic 50.0%
AGACAGAACCGGATTACTGG+AGG + Chr1:75620407-75620426 MsG0180004252.01.T01:CDS 50.0%
AGCATCACGGTCAAGATGAG+GGG - Chr1:75620812-75620831 None:intergenic 50.0%
AGGGCTCAGGCACTAATACA+CGG + Chr1:75620993-75621012 MsG0180004252.01.T01:CDS 50.0%
AGGTAGTATGGGATCCGTAG+TGG + Chr1:75620503-75620522 MsG0180004252.01.T01:CDS 50.0%
ATTCCACGGTCCATTAGTGG+GGG - Chr1:75620300-75620319 None:intergenic 50.0%
CAGCATCACGGTCAAGATGA+GGG - Chr1:75620813-75620832 None:intergenic 50.0%
CCAGATCAACATGCATGCCA+CGG - Chr1:75621555-75621574 None:intergenic 50.0%
CTATAGCTGACGCTGGTAAG+CGG + Chr1:75623845-75623864 MsG0180004252.01.T01:CDS 50.0%
CTCAGGGGCGGATCTTAATA+GGG - Chr1:75619966-75619985 None:intergenic 50.0%
CTTAAGTGGTACCCCTTGGT+TGG + Chr1:75619730-75619749 MsG0180004252.01.T01:intron 50.0%
CTTGCTTAAGTGGTACCCCT+TGG + Chr1:75619726-75619745 MsG0180004252.01.T01:intron 50.0%
GCCATCTCCGACTTCTTTGA+CGG - Chr1:75618698-75618717 None:intergenic 50.0%
GGAAGAAGCTTTCTTGCCCA+AGG + Chr1:75621681-75621700 MsG0180004252.01.T01:intron 50.0%
GGTAGTATGGGATCCGTAGT+GGG + Chr1:75620504-75620523 MsG0180004252.01.T01:CDS 50.0%
GTGTTCGACGTGCAGAGTAA+TGG - Chr1:75621781-75621800 None:intergenic 50.0%
TATAGCTGACGCTGGTAAGC+GGG + Chr1:75623846-75623865 MsG0180004252.01.T01:CDS 50.0%
TCAGCATCACGGTCAAGATG+AGG - Chr1:75620814-75620833 None:intergenic 50.0%
TCATCTTGACCGTGATGCTG+AGG + Chr1:75620813-75620832 MsG0180004252.01.T01:CDS 50.0%
TCCGTCAAAGAAGTCGGAGA+TGG + Chr1:75618694-75618713 MsG0180004252.01.T01:CDS 50.0%
TCCTCTCAAGGTCTCAGGTT+CGG + Chr1:75620212-75620231 MsG0180004252.01.T01:intron 50.0%
TGTGATCCTCTCAAGGTCTC+AGG + Chr1:75620207-75620226 MsG0180004252.01.T01:intron 50.0%
TGTGGCATCAGCCACAAAAG+AGG - Chr1:75623191-75623210 None:intergenic 50.0%
TGTTGGTGTGGCACATGTTG+AGG + Chr1:75623813-75623832 MsG0180004252.01.T01:CDS 50.0%
TTACTGGAGGCGGTTCAAAC+AGG + Chr1:75620420-75620439 MsG0180004252.01.T01:CDS 50.0%
TTGAACCGCCTCCAGTAATC+CGG - Chr1:75620418-75620437 None:intergenic 50.0%
! CTTTTGTGGCTGATGCCACA+AGG + Chr1:75623191-75623210 MsG0180004252.01.T01:intron 50.0%
! GGATCTTGGCTGATTTCGTC+AGG + Chr1:75619626-75619645 MsG0180004252.01.T01:intron 50.0%
!! GTGGTGTAGGCTTTAGACCT+TGG + Chr1:75620182-75620201 MsG0180004252.01.T01:intron 50.0%
AATCAGCCAAGATCCGCCAC+TGG - Chr1:75619621-75619640 None:intergenic 55.0%
ACCACGGAGCATAAACGGGA+TGG + Chr1:75619145-75619164 MsG0180004252.01.T01:CDS 55.0%
ACCATCCCGTTTATGCTCCG+TGG - Chr1:75619149-75619168 None:intergenic 55.0%
ACCGTGATGCTGAGGCTGTT+CGG + Chr1:75620821-75620840 MsG0180004252.01.T01:CDS 55.0%
CAGAACCGGATTACTGGAGG+CGG + Chr1:75620410-75620429 MsG0180004252.01.T01:CDS 55.0%
CCAAACAGTCTCACCAGTGG+CGG + Chr1:75619605-75619624 MsG0180004252.01.T01:intron 55.0%
CCGTGGCATGCATGTTGATC+TGG + Chr1:75621552-75621571 MsG0180004252.01.T01:intron 55.0%
CGCCACTGGTGAGACTGTTT+GGG - Chr1:75619607-75619626 None:intergenic 55.0%
CTCCCAAACAGTCTCACCAG+TGG + Chr1:75619602-75619621 MsG0180004252.01.T01:intron 55.0%
GCCTACAACAGCCAGTAGAG+CGG - Chr1:75621830-75621849 None:intergenic 55.0%
GCGGGAATGTGGAGTTATGC+AGG + Chr1:75620725-75620744 MsG0180004252.01.T01:CDS 55.0%
GCTGGTGAGGCATATCTTCC+AGG + Chr1:75622275-75622294 MsG0180004252.01.T01:CDS 55.0%
GGATCTTAATAGGGACCGGC+AGG - Chr1:75619957-75619976 None:intergenic 55.0%
GGCCTGTGCGAATAGACTTG+TGG + Chr1:75621847-75621866 MsG0180004252.01.T01:intron 55.0%
GGGCGGATCTTAATAGGGAC+CGG - Chr1:75619961-75619980 None:intergenic 55.0%
GTAAGCGGGCAACCTGTGAA+CGG + Chr1:75623860-75623879 MsG0180004252.01.T01:CDS 55.0%
GTACTTGTGAGACTCAGGGG+CGG - Chr1:75619978-75619997 None:intergenic 55.0%
GTCTCAGGTTCGGATCCTCA+TGG + Chr1:75620222-75620241 MsG0180004252.01.T01:intron 55.0%
GTTATGCAGGCTCACTGAGC+AGG + Chr1:75620738-75620757 MsG0180004252.01.T01:CDS 55.0%
TAGGTTCTGTGAGAGGGCTC+AGG + Chr1:75620980-75620999 MsG0180004252.01.T01:intron 55.0%
TAGTATGTGCGTCGTTGGCC+TGG + Chr1:75620583-75620602 MsG0180004252.01.T01:intron 55.0%
TCCGAACCTGAGACCTTGAG+AGG - Chr1:75620216-75620235 None:intergenic 55.0%
! GGTCTAAAGCCTACACCACC+AGG - Chr1:75620181-75620200 None:intergenic 55.0%
! TCCGCTCTACTGGCTGTTGT+AGG + Chr1:75621826-75621845 MsG0180004252.01.T01:intron 55.0%
!! ATAACCCACATGGGCTAGCC+TGG + Chr1:75620160-75620179 MsG0180004252.01.T01:intron 55.0%
ATCAAGTGCCCGCCGTTCAC+AGG - Chr1:75623875-75623894 None:intergenic 60.0%
CCCGAACAGCCTCAGCATCA+CGG - Chr1:75620825-75620844 None:intergenic 60.0%
CCGCCACTGGTGAGACTGTT+TGG - Chr1:75619608-75619627 None:intergenic 60.0%
CCGTGATGCTGAGGCTGTTC+GGG + Chr1:75620822-75620841 MsG0180004252.01.T01:CDS 60.0%
GAGGCGGTTCAAACAGGCAC+AGG + Chr1:75620426-75620445 MsG0180004252.01.T01:CDS 60.0%
GGACCGTGGAATTGATCCCC+CGG + Chr1:75620308-75620327 MsG0180004252.01.T01:intron 60.0%
GTCAGGGCACGGTGATACTC+TGG - Chr1:75623719-75623738 None:intergenic 60.0%
! ACCACCAGGCTAGCCCATGT+GGG - Chr1:75620167-75620186 None:intergenic 60.0%
!! ATGGGCTAGCCTGGTGGTGT+AGG + Chr1:75620169-75620188 MsG0180004252.01.T01:intron 60.0%
!! GTCTCACCAGTGGCGGATCT+TGG + Chr1:75619612-75619631 MsG0180004252.01.T01:intron 60.0%
AGCGGGCAACCTGTGAACGG+CGG + Chr1:75623863-75623882 MsG0180004252.01.T01:CDS 65.0%
ATAGGGACCGGCAGGAGCCA+TGG - Chr1:75619949-75619968 None:intergenic 65.0%
! CACCACCAGGCTAGCCCATG+TGG - Chr1:75620168-75620187 None:intergenic 65.0%
!! ACCCACATGGGCTAGCCTGG+TGG + Chr1:75620163-75620182 MsG0180004252.01.T01:intron 65.0%
GCGGGCAACCTGTGAACGGC+GGG + Chr1:75623864-75623883 MsG0180004252.01.T01:CDS 70.0%
! GGGCCCCCACTAATGGACCG+TGG + Chr1:75620294-75620313 MsG0180004252.01.T01:intron 70.0%
!! GGGGGTACCATGGCTCCTGC+CGG + Chr1:75619939-75619958 MsG0180004252.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 75618586 75623972 75618586 ID=MsG0180004252.01;Name=MsG0180004252.01
Chr1 mRNA 75618586 75623972 75618586 ID=MsG0180004252.01.T01;Parent=MsG0180004252.01;Name=MsG0180004252.01.T01;_AED=0.50;_eAED=0.61;_QI=0|0|0|1|0.83|0.85|7|0|543
Chr1 exon 75618586 75618774 75618586 ID=MsG0180004252.01.T01:exon:40754;Parent=MsG0180004252.01.T01
Chr1 exon 75618857 75619260 75618857 ID=MsG0180004252.01.T01:exon:40753;Parent=MsG0180004252.01.T01
Chr1 exon 75620350 75620584 75620350 ID=MsG0180004252.01.T01:exon:40752;Parent=MsG0180004252.01.T01
Chr1 exon 75620667 75620887 75620667 ID=MsG0180004252.01.T01:exon:40751;Parent=MsG0180004252.01.T01
Chr1 exon 75620983 75621184 75620983 ID=MsG0180004252.01.T01:exon:40750;Parent=MsG0180004252.01.T01
Chr1 exon 75622182 75622396 75622182 ID=MsG0180004252.01.T01:exon:40749;Parent=MsG0180004252.01.T01
Chr1 exon 75623807 75623972 75623807 ID=MsG0180004252.01.T01:exon:40748;Parent=MsG0180004252.01.T01
Chr1 CDS 75618586 75618774 75618586 ID=MsG0180004252.01.T01:cds;Parent=MsG0180004252.01.T01
Chr1 CDS 75618857 75619260 75618857 ID=MsG0180004252.01.T01:cds;Parent=MsG0180004252.01.T01
Chr1 CDS 75620350 75620584 75620350 ID=MsG0180004252.01.T01:cds;Parent=MsG0180004252.01.T01
Chr1 CDS 75620667 75620887 75620667 ID=MsG0180004252.01.T01:cds;Parent=MsG0180004252.01.T01
Chr1 CDS 75620983 75621184 75620983 ID=MsG0180004252.01.T01:cds;Parent=MsG0180004252.01.T01
Chr1 CDS 75622182 75622396 75622182 ID=MsG0180004252.01.T01:cds;Parent=MsG0180004252.01.T01
Chr1 CDS 75623807 75623972 75623807 ID=MsG0180004252.01.T01:cds;Parent=MsG0180004252.01.T01
Gene Sequence

>MsG0180004252.01.T01

ATGTCGAATTTCTTAGAGTTCAAACCTCTAAACGAGAAAACACTGATCGAGTACATAAAATCCATCCCTGCACTTTCATCCAAACTCGACAACAATTTCTCCGACTTATCCGTCAAAGAAGTCGGAGATGGCAACCTTAATTTCGTCTTCATCGTTTCCAACACCAACGGTTCTTTTGTCATCAAACAGGCTTTGCCATATGTTCGTTGCATAGGAGAATCATGGCCAATGACGAAAGAAAGAGCATATTTTGAGTCATTGGCGTTGAAAGAAGAGGGTAAATTGAGTCCTGATCATGTTCCTGAAGTCTATCATTTTGATCGTACTATGTCTTTGATTGGTATGCGTTATTTGGAGCCACCACATATAATTCTCAGAAAAGGTTTGATTGCTGGTGTTGAGTATCCTTTGTTGGCTGATCACATGTCTGATTTTATGGCTAATACGCTCTTCTTTACTTCTCTGCTTTACCGTTCTACCACGGAGCATAAACGGGATGGTATGAACTTTCTCTTTTCACCTTTTCATACCCTCATCATATTTATTTATTTGCAATTAAAAGTTTGTTACTCTAAGTCTATTTGTCCAATTCATTCGGAAGACGAACCTTCTGAAAATGATGATTATCAAAATCGTCTTGATTCTTATCAAGACAGAACCGGATTACTGGAGGCGGTTCAAACAGGCACAGGTCAAGTAAATGGTATTCCTGTAGCAATTGGTATTATGGATTTTCAGTTTATGGGAGGTAGTATGGGATCCGTAGTGGGTGAGAAAATCACTCGGTTGATCGAATATGCTACCAATCAACGTTTACCTCTTATTATAACATGCTATGTTACCATTGGTCTTAAGTTATTCTTGTTTCATGCAGTTGCTGAATTTTGCGGGAATGTGGAGTTATGCAGGCTCACTGAGCAGGTTGTGTTCTCTGACCCATATAAAGTTTCTGAGTATAATCGCTGGACTTCCCCTCATCTTGACCGTGATGCTGAGGCTGTTCGGGAAGACAATCTACTGAAGCTTGAAGTTGCTGAGCTAAAATCAAAGTTCTGTGAGAGGGCTCAGGCACTAATACACGGAGATCTACACACTGGTTCTGTGATGGTTACTCGTGAATCAACTCAAGTTATTGATCCTGAATTTGCATTTTATGGACCAATGGGTTTTGATATCGGAGCATTCCTAGGAAACTTGATTTTGGCTTTCTTTTCTCAGGATGGACATGCTGATCAAGCAAACGATAGAAAAGCATATAAGGAATGGATTCTTAAGACAATTGCAGACACTTGGAATCTTTTCCACCATAAATTCACTGCACTTTGGGATGAGCATAAAAATGGTGCTGGTGAGGCATATCTTCCAGGAATCTATAACAACCCTGATGTTCAACTACTTGTACAGAAGAAATACATGACAGATTTATTTCATGACAGTCTGGGATTTGGTGCTGCCAAAATGATAAGGAGAATTGTTGGTGTGGCACATGTTGAGGATCTTGAATCTATAGCTGACGCTGGTAAGCGGGCAACCTGTGAACGGCGGGCACTTGATTTAGCTAAGATGCTTCTCAAAGAAAGAAGAAAATTTGAGAGCATTTCTGAAATTGTCTTAGCAATTCAGCAATTTTAG

Protein sequence

>MsG0180004252.01.T01

MSNFLEFKPLNEKTLIEYIKSIPALSSKLDNNFSDLSVKEVGDGNLNFVFIVSNTNGSFVIKQALPYVRCIGESWPMTKERAYFESLALKEEGKLSPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGVEYPLLADHMSDFMANTLFFTSLLYRSTTEHKRDGMNFLFSPFHTLIIFIYLQLKVCYSKSICPIHSEDEPSENDDYQNRLDSYQDRTGLLEAVQTGTGQVNGIPVAIGIMDFQFMGGSMGSVVGEKITRLIEYATNQRLPLIITCYVTIGLKLFLFHAVAEFCGNVELCRLTEQVVFSDPYKVSEYNRWTSPHLDRDAEAVREDNLLKLEVAELKSKFCERAQALIHGDLHTGSVMVTRESTQVIDPEFAFYGPMGFDIGAFLGNLILAFFSQDGHADQANDRKAYKEWILKTIADTWNLFHHKFTALWDEHKNGAGEAYLPGIYNNPDVQLLVQKKYMTDLFHDSLGFGAAKMIRRIVGVAHVEDLESIADAGKRATCERRALDLAKMLLKERRKFESISEIVLAIQQF*