AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042206.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042206.01.T01 MTR_8g012320 86.374 455 16 5 1 411 1 453 0.0 773
MsG0880042206.01.T01 MTR_3g103500 68.786 346 100 5 72 411 107 450 1.46e-165 474
MsG0880042206.01.T01 MTR_3g103500 68.786 346 100 5 72 411 107 450 2.20e-163 476
MsG0880042206.01.T01 MTR_3g109040 55.481 447 149 9 4 412 2 436 1.51e-161 471
MsG0880042206.01.T01 MTR_3g109040 65.156 353 115 5 66 412 75 425 1.42e-160 468
MsG0880042206.01.T01 MTR_4g006010 66.000 350 103 6 73 412 108 451 1.53e-155 456
MsG0880042206.01.T01 MTR_6g007807 65.970 335 107 4 79 412 89 417 2.70e-155 454
MsG0880042206.01.T01 MTR_7g101950 49.648 284 139 2 131 412 25 306 5.70e-89 280
MsG0880042206.01.T01 MTR_1g061510 47.667 300 150 3 116 412 6 301 2.78e-86 272
MsG0880042206.01.T01 MTR_7g103590 47.018 285 146 2 131 412 28 310 1.99e-83 265
MsG0880042206.01.T01 MTR_1g061340 45.608 296 152 3 122 412 10 301 3.08e-83 265
MsG0880042206.01.T01 MTR_1g061280 45.965 285 149 2 131 412 19 301 5.79e-83 264
MsG0880042206.01.T01 MTR_1g061270 47.203 286 144 4 131 412 19 301 6.31e-81 258
MsG0880042206.01.T01 MTR_1g492700 57.339 218 91 1 195 412 93 308 3.74e-80 256
MsG0880042206.01.T01 MTR_4g055520 44.366 284 153 2 131 411 28 309 2.01e-79 254
MsG0880042206.01.T01 MTR_4g055520 44.366 284 153 2 131 411 28 309 6.06e-79 254
MsG0880042206.01.T01 MTR_4g055520 53.061 196 92 0 216 411 34 229 3.52e-70 229
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042206.01.T01 AT3G07330 64.045 445 115 7 1 411 1 434 0.0 555
MsG0880042206.01.T01 AT3G07330 64.045 445 115 7 1 411 1 434 0.0 555
MsG0880042206.01.T01 AT4G31590 68.047 338 98 5 83 412 106 441 1.91e-161 471
MsG0880042206.01.T01 AT2G24630 67.456 338 100 5 83 412 106 441 4.87e-161 470
MsG0880042206.01.T01 AT2G24630 67.456 338 100 5 83 412 106 441 4.87e-161 470
MsG0880042206.01.T01 AT4G07960 64.124 354 119 5 64 411 103 454 5.17e-155 455
MsG0880042206.01.T01 AT4G07960 64.124 354 119 5 64 411 103 454 5.17e-155 455
MsG0880042206.01.T01 AT3G28180 64.265 347 113 4 70 412 74 413 9.18e-155 453
MsG0880042206.01.T01 AT1G23480 46.780 295 151 2 122 412 42 334 5.22e-85 270
MsG0880042206.01.T01 AT1G23480 46.780 295 151 2 122 412 42 334 5.22e-85 270
MsG0880042206.01.T01 AT2G35650 47.000 300 149 4 117 412 40 333 1.09e-84 269
MsG0880042206.01.T01 AT5G03760 49.291 282 138 2 134 412 32 311 5.43e-84 267
MsG0880042206.01.T01 AT4G13410 44.966 298 159 2 118 412 30 325 1.09e-83 262
MsG0880042206.01.T01 AT5G22740 45.993 287 146 4 131 412 29 311 2.01e-82 263
MsG0880042206.01.T01 AT5G16190 45.614 285 150 2 131 412 6 288 3.56e-82 260
MsG0880042206.01.T01 AT4G13410 45.965 285 149 2 131 412 43 325 1.34e-81 261
MsG0880042206.01.T01 AT5G16190 45.614 285 150 2 131 412 6 288 1.39e-81 259
MsG0880042206.01.T01 AT2G35650 57.078 219 92 1 194 412 45 261 2.39e-81 258
MsG0880042206.01.T01 AT2G35650 57.078 219 92 1 194 412 45 261 2.39e-81 258
MsG0880042206.01.T01 AT1G23480 50.000 268 124 3 149 412 1 262 2.93e-81 258
MsG0880042206.01.T01 AT5G16190 45.614 285 150 2 131 412 6 288 4.52e-81 259
MsG0880042206.01.T01 AT1G24070 44.876 283 151 2 133 412 56 336 2.70e-80 253
MsG0880042206.01.T01 AT1G24070 44.876 283 151 2 133 412 56 336 1.63e-78 253
MsG0880042206.01.T01 AT5G16190 54.795 219 97 1 194 412 11 227 7.37e-78 248
MsG0880042206.01.T01 AT3G56000 45.804 286 145 4 135 412 26 309 9.50e-77 248
MsG0880042206.01.T01 AT4G16590 42.456 285 126 4 131 412 56 305 5.34e-67 222
MsG0880042206.01.T01 AT2G35650 57.738 168 71 0 245 412 8 175 4.18e-62 206
MsG0880042206.01.T01 AT1G23480 56.805 169 73 0 244 412 21 189 2.46e-61 204
MsG0880042206.01.T01 AT4G13410 55.828 163 72 0 250 412 2 164 1.17e-57 194

Find 103 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCGTCTTCGCGGCTTTAT+AGG 0.122188 8:+5379155 MsG0880042206.01.T01:CDS
TTAATTGGTGGGTGGTTGTT+AGG 0.164735 8:+5379193 MsG0880042206.01.T01:CDS
TGATATTCGGGCGAATTATT+TGG 0.183690 8:+5379318 MsG0880042206.01.T01:CDS
CATTCTTGAAACTCGTAATT+TGG 0.189825 8:-5378816 None:intergenic
GGTATCTTTATTGACTTCTT+TGG 0.223575 8:+5382141 MsG0880042206.01.T01:CDS
CGCGGCTTTATAGGGTGATT+AGG 0.248332 8:+5379164 MsG0880042206.01.T01:CDS
GGACTTGTTACCTTGAAATA+AGG 0.259806 8:-5381271 None:intergenic
CGCCAGGTGGATTGATATTC+GGG 0.278047 8:+5379306 MsG0880042206.01.T01:CDS
TCAAGGCAGAAGTGCATAAA+TGG 0.284235 8:+5381080 MsG0880042206.01.T01:CDS
ATCGTCTTCTTTAAGAAATC+TGG 0.286592 8:-5381247 None:intergenic
CTTCTGCCTTGATAAGGTTT+TGG 0.286898 8:-5381069 None:intergenic
ACGCCAGGTGGATTGATATT+CGG 0.321973 8:+5379305 MsG0880042206.01.T01:CDS
GGATCAAGTTTAGGAGGATT+AGG 0.325056 8:+5379431 MsG0880042206.01.T01:CDS
GATGGATTATCCTATGGTTT+TGG 0.331387 8:+5379498 MsG0880042206.01.T01:CDS
ATCGTCTTCGCGGCTTTATA+GGG 0.333413 8:+5379156 MsG0880042206.01.T01:CDS
GCGGCTTTATAGGGTGATTA+GGG 0.333735 8:+5379165 MsG0880042206.01.T01:CDS
TAATTGGTGGGTGGTTGTTA+GGG 0.341641 8:+5379194 MsG0880042206.01.T01:CDS
ATTGACTTCTTTGGTTTCAA+TGG 0.343119 8:+5382150 MsG0880042206.01.T01:CDS
TTACAAATGCCCACCTTGCC+TGG 0.343213 8:-5382041 None:intergenic
TTTGTATCCGTTGATGTTAC+CGG 0.353552 8:+5378921 MsG0880042206.01.T01:CDS
GGAGGTGGAGGAGGAGGAGG+AGG 0.360331 8:+5378942 MsG0880042206.01.T01:CDS
CAATTTATCGTTCCACTTTG+AGG 0.373287 8:+5382101 MsG0880042206.01.T01:CDS
ATTGAAGGGAAGGGATGATT+TGG 0.384482 8:+5382011 MsG0880042206.01.T01:intron
TGTACAAGCATTCTCTCCTT+TGG 0.387277 8:-5381016 None:intergenic
TCCGTTGATGTTACCGGAGG+TGG 0.403192 8:+5378927 MsG0880042206.01.T01:CDS
AATGAGTTGTGATTATGTTA+AGG 0.406396 8:+5381180 MsG0880042206.01.T01:CDS
ATACTAACTGCTGCGATTGA+TGG 0.410110 8:-5380983 None:intergenic
GAAGACGATACCTTATTTCA+AGG 0.414787 8:+5381261 MsG0880042206.01.T01:CDS
TGTTAAGGATTATGACTTTG+TGG 0.416744 8:+5381195 MsG0880042206.01.T01:CDS
TATGCACTTCTGCCTTGATA+AGG 0.420288 8:-5381075 None:intergenic
TTTGGTTTCAATGGAACTGC+TGG 0.420392 8:+5382159 MsG0880042206.01.T01:CDS
TTAAGAAATCTGGTGTTGGC+TGG 0.423624 8:-5381237 None:intergenic
TCAATGGAACTGCTGGTGTC+TGG 0.424551 8:+5382166 MsG0880042206.01.T01:CDS
TTCTCTCCTTTGGCCAATCC+AGG 0.431518 8:-5381006 None:intergenic
TTCTGCTGATGTGTTGGGAT+TGG 0.439510 8:+5379270 MsG0880042206.01.T01:CDS
ACCGGAGGTGGAGGAGGAGG+AGG 0.440542 8:+5378939 MsG0880042206.01.T01:CDS
TGTACAAGTTCTTGATGATT+CGG 0.442769 8:+5381033 MsG0880042206.01.T01:CDS
CCACTTTGAGGTTGAACAGC+AGG 0.453694 8:+5382113 MsG0880042206.01.T01:CDS
GCTAGTGTGGATTATGATGA+TGG 0.454096 8:+5379460 MsG0880042206.01.T01:CDS
ACCAGCCGCCACTCTCCTCT+AGG 0.460033 8:-5382200 None:intergenic
TGCTGGTGTCTGGAGAATAA+AGG 0.463477 8:+5382176 MsG0880042206.01.T01:CDS
GTTGGTTCTGCTGATGTGTT+GGG 0.466009 8:+5379265 MsG0880042206.01.T01:CDS
TTCTTTAAGAAATCTGGTGT+TGG 0.467471 8:-5381241 None:intergenic
GTGGTTGTTAGGGTTTGAGT+TGG 0.467814 8:+5379204 MsG0880042206.01.T01:CDS
AATGGCAACAAAGGGGTGTT+CGG 0.468454 8:+5381098 MsG0880042206.01.T01:CDS
GTTACCGGAGGTGGAGGAGG+AGG 0.468988 8:+5378936 MsG0880042206.01.T01:CDS
GGTTGGTTCTGCTGATGTGT+TGG 0.471372 8:+5379264 MsG0880042206.01.T01:CDS
GAGGTTGAACAGCAGGTGAA+TGG 0.487037 8:+5382120 MsG0880042206.01.T01:CDS
TCATAATCCACACTAGCAAC+AGG 0.487551 8:-5379454 None:intergenic
GATTAGGCCTGTTGCTAGTG+TGG 0.488825 8:+5379447 MsG0880042206.01.T01:CDS
AGTGCATAAATGGCAACAAA+GGG 0.493869 8:+5381090 MsG0880042206.01.T01:CDS
TCATTGTGCAATCTGTGGAT+AGG 0.498904 8:+5379383 MsG0880042206.01.T01:CDS
GTAACATCAACGGATACAAA+TGG 0.506845 8:-5378918 None:intergenic
GATGTTACCGGAGGTGGAGG+AGG 0.511941 8:+5378933 MsG0880042206.01.T01:CDS
GTGCTATATTTCAAATCTTG+AGG 0.517889 8:+5382311 MsG0880042206.01.T01:CDS
GGATGATTTGGCATTAGTCC+AGG 0.519366 8:+5382023 MsG0880042206.01.T01:CDS
AATCGCAGCAGTTAGTATCC+TGG 0.519427 8:+5380988 MsG0880042206.01.T01:CDS
GATTCCTATGTGTAATGAAA+GGG 0.521686 8:+5379525 MsG0880042206.01.T01:CDS
TTCGTGCTCATCTCTGCGGA+TGG 0.530530 8:+5382259 MsG0880042206.01.T01:CDS
GCTTATACGCACAGGATACA+AGG 0.535795 8:+5381138 MsG0880042206.01.T01:CDS
GAGTGTGATGGATTATCCTA+TGG 0.535824 8:+5379492 MsG0880042206.01.T01:CDS
AGATTCCTATGTGTAATGAA+AGG 0.539636 8:+5379524 MsG0880042206.01.T01:CDS
CCAGCCGCCACTCTCCTCTA+GGG 0.542535 8:-5382199 None:intergenic
AGATATCCAAAACCTTATCA+AGG 0.543821 8:+5381063 MsG0880042206.01.T01:CDS
GCAACAACAAACCGTTCAGA+TGG 0.544457 8:+5378970 MsG0880042206.01.T01:CDS
TGATGTGTTGGGATTGGTTG+CGG 0.544995 8:+5379276 MsG0880042206.01.T01:CDS
CGCCCGAATATCAATCCACC+TGG 0.546651 8:-5379308 None:intergenic
CCCTAGAGGAGAGTGGCGGC+TGG 0.547077 8:+5382199 MsG0880042206.01.T01:CDS
GTTGATGTTACCGGAGGTGG+AGG 0.548075 8:+5378930 MsG0880042206.01.T01:CDS
GAGCTGATTCATCGTCTTCG+CGG 0.557237 8:+5379146 MsG0880042206.01.T01:CDS
CAGCAGTTAGTATCCTGGAT+TGG 0.560761 8:+5380993 MsG0880042206.01.T01:CDS
CAAATTACGAGTTTCAAGAA+TGG 0.561308 8:+5378817 MsG0880042206.01.T01:CDS
ATTACGAGTTTCAAGAATGG+TGG 0.566895 8:+5378820 MsG0880042206.01.T01:CDS
AACAAACCGTTCAGATGGAT+CGG 0.571231 8:+5378975 MsG0880042206.01.T01:CDS
GGAATCTGAACCAAAACCAT+AGG 0.571642 8:-5379508 None:intergenic
ACGAACAACTGTTGAGGACA+TGG 0.575504 8:+5382227 MsG0880042206.01.T01:CDS
ACCTCCCTTTCATTACACAT+AGG 0.580816 8:-5379529 None:intergenic
CTAGTGTGGATTATGATGAT+GGG 0.582989 8:+5379461 MsG0880042206.01.T01:CDS
CCTGCTGTTCAACCTCAAAG+TGG 0.586676 8:-5382113 None:intergenic
AAGTGCATAAATGGCAACAA+AGG 0.590116 8:+5381089 MsG0880042206.01.T01:CDS
TCCACCTCCGGTAACATCAA+CGG 0.595119 8:-5378928 None:intergenic
AACATAATCACAACTCATTG+CGG 0.600523 8:-5381176 None:intergenic
GGCATTAGTCCAGGCAAGGT+GGG 0.601187 8:+5382032 MsG0880042206.01.T01:CDS
TTCGTCAAACTCTGCAAAGG+CGG 0.602112 8:-5379343 None:intergenic
TCCTATGTGTAATGAAAGGG+AGG 0.605841 8:+5379528 MsG0880042206.01.T01:CDS
ATTTGGCATTAGTCCAGGCA+AGG 0.610560 8:+5382028 MsG0880042206.01.T01:CDS
TTCGGATCATATATAGACAT+AGG 0.611176 8:+5381116 MsG0880042206.01.T01:CDS
AGACATAGGCTTATACGCAC+AGG 0.619431 8:+5381130 MsG0880042206.01.T01:CDS
TCAGCAGAACCAACCGATGG+CGG 0.622287 8:-5379256 None:intergenic
AAGGTGGGCATTTGTAAACA+AGG 0.624666 8:+5382047 MsG0880042206.01.T01:CDS
CTGGAGAATAAAGGCCCTAG+AGG 0.626735 8:+5382185 MsG0880042206.01.T01:CDS
TAGTATCCTGGATTGGCCAA+AGG 0.628007 8:+5381000 MsG0880042206.01.T01:CDS
ATACGCACAGGATACAAGGC+AGG 0.634354 8:+5381142 MsG0880042206.01.T01:CDS
TGGCATTAGTCCAGGCAAGG+TGG 0.635723 8:+5382031 MsG0880042206.01.T01:CDS
TGGGAGTGTTGAGAGTGTGA+TGG 0.639622 8:+5379480 MsG0880042206.01.T01:CDS
ATATTCGTCAAACTCTGCAA+AGG 0.658108 8:-5379346 None:intergenic
ATAAAGGCCCTAGAGGAGAG+TGG 0.659042 8:+5382192 MsG0880042206.01.T01:CDS
GTTAGAACGAACAACTGTTG+AGG 0.664120 8:+5382221 MsG0880042206.01.T01:CDS
GTATCCGTTGATGTTACCGG+AGG 0.666454 8:+5378924 MsG0880042206.01.T01:CDS
GCTGTTCGTGCTCATCTCTG+CGG 0.669570 8:+5382255 MsG0880042206.01.T01:CDS
ACATCAGCAGAACCAACCGA+TGG 0.689601 8:-5379259 None:intergenic
GTGCATAAATGGCAACAAAG+GGG 0.706412 8:+5381091 MsG0880042206.01.T01:CDS
AAGGCCCTAGAGGAGAGTGG+CGG 0.718388 8:+5382195 MsG0880042206.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAAAAATGAGTTTAAA+AGG - Chr8:5379578-5379597 None:intergenic 15.0%
!! AAATTATTATTGTGATTGAA+AGG + Chr8:5380801-5380820 MsG0880042206.01.T01:intron 15.0%
!! AACAAAAAATGAGTTTAAAA+GGG - Chr8:5379577-5379596 None:intergenic 15.0%
!! ATAAATTAAAGTTGAGATTA+GGG + Chr8:5381394-5381413 MsG0880042206.01.T01:intron 15.0%
!! TATAAATTAAAGTTGAGATT+AGG + Chr8:5381393-5381412 MsG0880042206.01.T01:intron 15.0%
!!! AATCTCAACTTTAATTTATA+AGG - Chr8:5381393-5381412 None:intergenic 15.0%
!! TACTTTCAACTTTGAATTTA+TGG - Chr8:5381295-5381314 None:intergenic 20.0%
!! TATTATAAATCCTCAATTGA+GGG - Chr8:5381428-5381447 None:intergenic 20.0%
!! TTAGAGTAAACAAGAAAATT+TGG - Chr8:5381992-5382011 None:intergenic 20.0%
!!! AAGAAATTTTCCACTATTTT+TGG + Chr8:5381883-5381902 MsG0880042206.01.T01:intron 20.0%
!!! AGAAATTTTCCACTATTTTT+GGG + Chr8:5381884-5381903 MsG0880042206.01.T01:intron 20.0%
!!! ATTTCTTTCATTTTTCAAAG+TGG - Chr8:5381870-5381889 None:intergenic 20.0%
!!! TATTTTTCTCAATGATGTTA+AGG + Chr8:5382287-5382306 MsG0880042206.01.T01:CDS 20.0%
! AAAATCAATGTTCTCAATCA+CGG - Chr8:5380776-5380795 None:intergenic 25.0%
! AAATTCAAAGAACACTGAAT+TGG - Chr8:5381692-5381711 None:intergenic 25.0%
! AATGAGTTGTGATTATGTTA+AGG + Chr8:5381180-5381199 MsG0880042206.01.T01:CDS 25.0%
! ACTGTTGGATTTATATCAAA+TGG + Chr8:5379071-5379090 MsG0880042206.01.T01:intron 25.0%
! ATTATAGCACTATAGTACAA+CGG - Chr8:5379993-5380012 None:intergenic 25.0%
! CAAAACAAAGTTTGTAACAT+TGG + Chr8:5381788-5381807 MsG0880042206.01.T01:intron 25.0%
! CTATTATAAATCCTCAATTG+AGG - Chr8:5381429-5381448 None:intergenic 25.0%
! TAAAACTTGGTTATTGTTGT+TGG + Chr8:5379706-5379725 MsG0880042206.01.T01:intron 25.0%
! TTAATTACACAATCATTCAG+AGG + Chr8:5381718-5381737 MsG0880042206.01.T01:intron 25.0%
!! CTTTTCAATATTAGTGTTGT+CGG + Chr8:5380628-5380647 MsG0880042206.01.T01:intron 25.0%
!! TAGGCTCTTAACATTTTATA+GGG + Chr8:5379773-5379792 MsG0880042206.01.T01:intron 25.0%
!! TCTTGTTTACTCTAATTGAA+GGG + Chr8:5381997-5382016 MsG0880042206.01.T01:intron 25.0%
!! TGATTGAAACATGATTTTCT+AGG - Chr8:5380524-5380543 None:intergenic 25.0%
!! TTAGGCTCTTAACATTTTAT+AGG + Chr8:5379772-5379791 MsG0880042206.01.T01:intron 25.0%
!! TTCTTGTTTACTCTAATTGA+AGG + Chr8:5381996-5382015 MsG0880042206.01.T01:intron 25.0%
!!! AATGGATTACTTATCTTGTA+AGG + Chr8:5379089-5379108 MsG0880042206.01.T01:intron 25.0%
!!! ATAGGATTGTTTTGATTTTG+GGG + Chr8:5379401-5379420 MsG0880042206.01.T01:CDS 25.0%
!!! CTCATTTTTTGTTTAAATGC+TGG + Chr8:5379584-5379603 MsG0880042206.01.T01:intron 25.0%
!!! GATAGGATTGTTTTGATTTT+GGG + Chr8:5379400-5379419 MsG0880042206.01.T01:CDS 25.0%
!!! GTTACAAACTTTGTTTTGAA+TGG - Chr8:5381786-5381805 None:intergenic 25.0%
!!! TTTTTTCGTTGATGTACAAT+AGG + Chr8:5380956-5380975 MsG0880042206.01.T01:intron 25.0%
AACATAATCACAACTCATTG+CGG - Chr8:5381179-5381198 None:intergenic 30.0%
AATGAGTTTAAAAGGGACTA+AGG - Chr8:5379570-5379589 None:intergenic 30.0%
AGATATCCAAAACCTTATCA+AGG + Chr8:5381063-5381082 MsG0880042206.01.T01:CDS 30.0%
AGATTCCTATGTGTAATGAA+AGG + Chr8:5379524-5379543 MsG0880042206.01.T01:CDS 30.0%
ATTAAAGTTGAGATTAGGGA+AGG + Chr8:5381398-5381417 MsG0880042206.01.T01:intron 30.0%
CAAATTACGAGTTTCAAGAA+TGG + Chr8:5378817-5378836 MsG0880042206.01.T01:CDS 30.0%
CATGACAATAGTGATAAGAA+GGG - Chr8:5380837-5380856 None:intergenic 30.0%
CATTCTTGAAACTCGTAATT+TGG - Chr8:5378819-5378838 None:intergenic 30.0%
GAATCAATGTTGTCAAATAG+CGG - Chr8:5380026-5380045 None:intergenic 30.0%
GATTCATGTAATGTAGATGT+TGG + Chr8:5380041-5380060 MsG0880042206.01.T01:intron 30.0%
GATTCCTATGTGTAATGAAA+GGG + Chr8:5379525-5379544 MsG0880042206.01.T01:CDS 30.0%
GTGAATTACACTATCAACTA+AGG - Chr8:5381911-5381930 None:intergenic 30.0%
GTGCTATATTTCAAATCTTG+AGG + Chr8:5382311-5382330 MsG0880042206.01.T01:CDS 30.0%
GTGGTAAGTAGTATTTACAT+GGG + Chr8:5380063-5380082 MsG0880042206.01.T01:intron 30.0%
TAGTATTTACATGGGGAAAA+TGG + Chr8:5380071-5380090 MsG0880042206.01.T01:intron 30.0%
TGAGTCACTTATGTAACTTA+AGG - Chr8:5381847-5381866 None:intergenic 30.0%
TGGTAAGTAGTATTTACATG+GGG + Chr8:5380064-5380083 MsG0880042206.01.T01:intron 30.0%
TGTTAAGGATTATGACTTTG+TGG + Chr8:5381195-5381214 MsG0880042206.01.T01:CDS 30.0%
TTCGGATCATATATAGACAT+AGG + Chr8:5381116-5381135 MsG0880042206.01.T01:CDS 30.0%
TTGAAAAGAGACAAGAATAG+AGG - Chr8:5380616-5380635 None:intergenic 30.0%
TTTACTCTAATTGAAGGGAA+GGG + Chr8:5382002-5382021 MsG0880042206.01.T01:intron 30.0%
! AGGCTCTTAACATTTTATAG+GGG + Chr8:5379774-5379793 MsG0880042206.01.T01:intron 30.0%
! ATCGTCTTCTTTAAGAAATC+TGG - Chr8:5381250-5381269 None:intergenic 30.0%
! ATTGACTTCTTTGGTTTCAA+TGG + Chr8:5382150-5382169 MsG0880042206.01.T01:CDS 30.0%
! CTCATTTTCTGTCTTTACAA+CGG - Chr8:5380321-5380340 None:intergenic 30.0%
! GTTTTTGTGATTCATGCTTT+AGG + Chr8:5379754-5379773 MsG0880042206.01.T01:intron 30.0%
! TAACGAGTTGGAATGAAATT+TGG + Chr8:5379625-5379644 MsG0880042206.01.T01:intron 30.0%
! TGTACAAGTTCTTGATGATT+CGG + Chr8:5381033-5381052 MsG0880042206.01.T01:CDS 30.0%
! TTCTTTAAGAAATCTGGTGT+TGG - Chr8:5381244-5381263 None:intergenic 30.0%
!! ATTAGGGTGTTTTTAATTGG+TGG + Chr8:5379181-5379200 MsG0880042206.01.T01:CDS 30.0%
!! ATTTTAAAGGCTGGCATTTT+AGG + Chr8:5379233-5379252 MsG0880042206.01.T01:CDS 30.0%
!! GAGTTGGTTGCATATTTTAA+AGG + Chr8:5379220-5379239 MsG0880042206.01.T01:CDS 30.0%
!! GGTATCTTTATTGACTTCTT+TGG + Chr8:5382141-5382160 MsG0880042206.01.T01:CDS 30.0%
!! GTGATTAGGGTGTTTTTAAT+TGG + Chr8:5379178-5379197 MsG0880042206.01.T01:CDS 30.0%
!! TTAGGGTGTTTTTAATTGGT+GGG + Chr8:5379182-5379201 MsG0880042206.01.T01:CDS 30.0%
!!! GGATAGGATTGTTTTGATTT+TGG + Chr8:5379399-5379418 MsG0880042206.01.T01:CDS 30.0%
!!! TTTTGATTTTGGGGTGTTTT+TGG + Chr8:5379410-5379429 MsG0880042206.01.T01:CDS 30.0%
AAAAGAGACAAGAATAGAGG+AGG - Chr8:5380613-5380632 None:intergenic 35.0%
AAATGAAAGGGTTTGTGTCT+TGG + Chr8:5380228-5380247 MsG0880042206.01.T01:intron 35.0%
AACTAAGGTCCCAAAAATAG+TGG - Chr8:5381896-5381915 None:intergenic 35.0%
AAGTGCAAGACAGTTATCAT+GGG + Chr8:5379017-5379036 MsG0880042206.01.T01:intron 35.0%
AAGTGCATAAATGGCAACAA+AGG + Chr8:5381089-5381108 MsG0880042206.01.T01:CDS 35.0%
AATACACTACTTCGTACACA+GGG - Chr8:5379943-5379962 None:intergenic 35.0%
AATAGTAGATGACAGGACAT+AGG - Chr8:5381761-5381780 None:intergenic 35.0%
AATATTAGTGTTGTCGGTAG+TGG + Chr8:5380634-5380653 MsG0880042206.01.T01:intron 35.0%
AATCTTGTGCAAGAGTAGAA+GGG + Chr8:5379814-5379833 MsG0880042206.01.T01:intron 35.0%
AATGGAGAATAGTAGATGAC+AGG - Chr8:5381768-5381787 None:intergenic 35.0%
ACCTACCAATTGCAGAATTT+CGG + Chr8:5381461-5381480 MsG0880042206.01.T01:intron 35.0%
ACGTTGCAGTTTATAATCCT+TGG - Chr8:5381934-5381953 None:intergenic 35.0%
AGTGCATAAATGGCAACAAA+GGG + Chr8:5381090-5381109 MsG0880042206.01.T01:CDS 35.0%
ATAGAGTTGGCATGAAACAA+AGG - Chr8:5380584-5380603 None:intergenic 35.0%
ATATTCGTCAAACTCTGCAA+AGG - Chr8:5379349-5379368 None:intergenic 35.0%
ATTACGAGTTTCAAGAATGG+TGG + Chr8:5378820-5378839 MsG0880042206.01.T01:CDS 35.0%
CAATTTATCGTTCCACTTTG+AGG + Chr8:5382101-5382120 MsG0880042206.01.T01:CDS 35.0%
CGTTGCAGTTTATAATCCTT+GGG - Chr8:5381933-5381952 None:intergenic 35.0%
CTCATCAAGTATTCTGATGA+AGG - Chr8:5380412-5380431 None:intergenic 35.0%
GAGGAGGAAAATTATAGAGT+TGG - Chr8:5380597-5380616 None:intergenic 35.0%
GCATGACAATAGTGATAAGA+AGG - Chr8:5380838-5380857 None:intergenic 35.0%
GGTGGTAAGTAGTATTTACA+TGG + Chr8:5380062-5380081 MsG0880042206.01.T01:intron 35.0%
GTAACATCAACGGATACAAA+TGG - Chr8:5378921-5378940 None:intergenic 35.0%
GTTTACTCTAATTGAAGGGA+AGG + Chr8:5382001-5382020 MsG0880042206.01.T01:intron 35.0%
TAAAAACACAACGACACAGA+TGG - Chr8:5381506-5381525 None:intergenic 35.0%
TAGAGTTGGCATGAAACAAA+GGG - Chr8:5380583-5380602 None:intergenic 35.0%
TAGTGTATTGCGGAACAATA+GGG + Chr8:5379954-5379973 MsG0880042206.01.T01:intron 35.0%
TCATGTAATGTAGATGTTGG+TGG + Chr8:5380044-5380063 MsG0880042206.01.T01:intron 35.0%
TGATATTCGGGCGAATTATT+TGG + Chr8:5379318-5379337 MsG0880042206.01.T01:CDS 35.0%
TGCAGAATCTTCACATACTT+TGG + Chr8:5381596-5381615 MsG0880042206.01.T01:intron 35.0%
TTCTCAATCACGGAAAATAG+TGG - Chr8:5380766-5380785 None:intergenic 35.0%
TTGCAGAAGGGAAAATGAAA+GGG + Chr8:5380216-5380235 MsG0880042206.01.T01:intron 35.0%
TTTGTATCCGTTGATGTTAC+CGG + Chr8:5378921-5378940 MsG0880042206.01.T01:CDS 35.0%
! CTAGTGTGGATTATGATGAT+GGG + Chr8:5379461-5379480 MsG0880042206.01.T01:CDS 35.0%
! GAAGACGATACCTTATTTCA+AGG + Chr8:5381261-5381280 MsG0880042206.01.T01:CDS 35.0%
!! AAGTTTTATCCCACTAACTG+GGG - Chr8:5379694-5379713 None:intergenic 35.0%
!! CAAGTTTTATCCCACTAACT+GGG - Chr8:5379695-5379714 None:intergenic 35.0%
!! GATAAAGTGTTGCCAAATTG+CGG + Chr8:5380698-5380717 MsG0880042206.01.T01:intron 35.0%
!! GGACTTGTTACCTTGAAATA+AGG - Chr8:5381274-5381293 None:intergenic 35.0%
!! GTTTTTGGATCAAGTTTAGG+AGG + Chr8:5379425-5379444 MsG0880042206.01.T01:CDS 35.0%
!! TGCTTTAGAGATTAACGAGT+TGG + Chr8:5379613-5379632 MsG0880042206.01.T01:intron 35.0%
!! TGGTTGCATATTTTAAAGGC+TGG + Chr8:5379224-5379243 MsG0880042206.01.T01:CDS 35.0%
!! TTGATAGTGTAATTCACCCA+AGG + Chr8:5381914-5381933 MsG0880042206.01.T01:intron 35.0%
!!! ATGTGTCACTTGTGTTTTTG+TGG + Chr8:5380350-5380369 MsG0880042206.01.T01:intron 35.0%
!!! CTGGGTTTGTTATGTTTTGT+TGG + Chr8:5380294-5380313 MsG0880042206.01.T01:intron 35.0%
!!! GATGGATTATCCTATGGTTT+TGG + Chr8:5379498-5379517 MsG0880042206.01.T01:CDS 35.0%
!!! GGTGTTTTTGGATCAAGTTT+AGG + Chr8:5379422-5379441 MsG0880042206.01.T01:CDS 35.0%
AAAGGGAGGTAAGAACATGT+AGG + Chr8:5379542-5379561 MsG0880042206.01.T01:intron 40.0%
AACAAACCGTTCAGATGGAT+CGG + Chr8:5378975-5378994 MsG0880042206.01.T01:CDS 40.0%
AAGGTGGGCATTTGTAAACA+AGG + Chr8:5382047-5382066 MsG0880042206.01.T01:CDS 40.0%
ACCTCCCTTTCATTACACAT+AGG - Chr8:5379532-5379551 None:intergenic 40.0%
AGAGTTGGCATGAAACAAAG+GGG - Chr8:5380582-5380601 None:intergenic 40.0%
AGCACACACTCAACTCATTA+AGG - Chr8:5380098-5380117 None:intergenic 40.0%
AGTGCTATAGTCTAGATGTG+TGG + Chr8:5380725-5380744 MsG0880042206.01.T01:intron 40.0%
ATACTAACTGCTGCGATTGA+TGG - Chr8:5380986-5381005 None:intergenic 40.0%
ATAGCACTATAGCCGCAATT+TGG - Chr8:5380713-5380732 None:intergenic 40.0%
ATGTGCATCAGTCTCAAGTT+TGG - Chr8:5381654-5381673 None:intergenic 40.0%
ATTGAAGGGAAGGGATGATT+TGG + Chr8:5382011-5382030 MsG0880042206.01.T01:intron 40.0%
CAAGTCCGAAATTCTGCAAT+TGG - Chr8:5381469-5381488 None:intergenic 40.0%
CAATACACTACTTCGTACAC+AGG - Chr8:5379944-5379963 None:intergenic 40.0%
CACGTGTCACATAACAATAG+CGG - Chr8:5380672-5380691 None:intergenic 40.0%
CCAGTTAGTGGGATAAAACT+TGG + Chr8:5379693-5379712 MsG0880042206.01.T01:intron 40.0%
CTTGCAGAAGGGAAAATGAA+AGG + Chr8:5380215-5380234 MsG0880042206.01.T01:intron 40.0%
GAAGTGCAAGACAGTTATCA+TGG + Chr8:5379016-5379035 MsG0880042206.01.T01:intron 40.0%
GAATCTTGTGCAAGAGTAGA+AGG + Chr8:5379813-5379832 MsG0880042206.01.T01:intron 40.0%
GGAATCTGAACCAAAACCAT+AGG - Chr8:5379511-5379530 None:intergenic 40.0%
GGATCAAGTTTAGGAGGATT+AGG + Chr8:5379431-5379450 MsG0880042206.01.T01:CDS 40.0%
GTAGTGTATTGCGGAACAAT+AGG + Chr8:5379953-5379972 MsG0880042206.01.T01:intron 40.0%
GTGCATAAATGGCAACAAAG+GGG + Chr8:5381091-5381110 MsG0880042206.01.T01:CDS 40.0%
GTGTACGAAGTAGTGTATTG+CGG + Chr8:5379944-5379963 MsG0880042206.01.T01:intron 40.0%
GTTAGAACGAACAACTGTTG+AGG + Chr8:5382221-5382240 MsG0880042206.01.T01:CDS 40.0%
TATGCACTTCTGCCTTGATA+AGG - Chr8:5381078-5381097 None:intergenic 40.0%
TCAGTGTAGTAGGTGTAGTA+GGG + Chr8:5380158-5380177 MsG0880042206.01.T01:intron 40.0%
TCATAATCCACACTAGCAAC+AGG - Chr8:5379457-5379476 None:intergenic 40.0%
TCATTGTGCAATCTGTGGAT+AGG + Chr8:5379383-5379402 MsG0880042206.01.T01:CDS 40.0%
TCCGAAATTCTGCAATTGGT+AGG - Chr8:5381465-5381484 None:intergenic 40.0%
TCCTATGTGTAATGAAAGGG+AGG + Chr8:5379528-5379547 MsG0880042206.01.T01:CDS 40.0%
TGAAGTGATGTTCTATAGCG+AGG - Chr8:5380890-5380909 None:intergenic 40.0%
TGTACAAGCATTCTCTCCTT+TGG - Chr8:5381019-5381038 None:intergenic 40.0%
TTGTGGTTGTCTTAGAGAGT+AGG + Chr8:5380367-5380386 MsG0880042206.01.T01:intron 40.0%
TTTGTGGCTTGAATGTGTTG+TGG + Chr8:5380126-5380145 MsG0880042206.01.T01:intron 40.0%
! AGAGCTTTGTAACTTGCAGA+AGG + Chr8:5380203-5380222 MsG0880042206.01.T01:intron 40.0%
! CTTCTGCCTTGATAAGGTTT+TGG - Chr8:5381072-5381091 None:intergenic 40.0%
! GAGCTTTGTAACTTGCAGAA+GGG + Chr8:5380204-5380223 MsG0880042206.01.T01:intron 40.0%
! GCTAGTGTGGATTATGATGA+TGG + Chr8:5379460-5379479 MsG0880042206.01.T01:CDS 40.0%
! GCTTTTCATTGTGCAATCTG+TGG + Chr8:5379378-5379397 MsG0880042206.01.T01:CDS 40.0%
! TAATTGGTGGGTGGTTGTTA+GGG + Chr8:5379194-5379213 MsG0880042206.01.T01:CDS 40.0%
! TCAAGGCAGAAGTGCATAAA+TGG + Chr8:5381080-5381099 MsG0880042206.01.T01:CDS 40.0%
! TTAATTGGTGGGTGGTTGTT+AGG + Chr8:5379193-5379212 MsG0880042206.01.T01:CDS 40.0%
! TTTGGTTTCAATGGAACTGC+TGG + Chr8:5382159-5382178 MsG0880042206.01.T01:CDS 40.0%
! TTTTCACCGATCCATCTGAA+CGG - Chr8:5378984-5379003 None:intergenic 40.0%
!! CCAAGTTTTATCCCACTAAC+TGG - Chr8:5379696-5379715 None:intergenic 40.0%
!! GAGTGTGATGGATTATCCTA+TGG + Chr8:5379492-5379511 MsG0880042206.01.T01:CDS 40.0%
!! TGTGTGCTCAAGTGTTTTTG+TGG + Chr8:5380110-5380129 MsG0880042206.01.T01:intron 40.0%
!! TTAAGAAATCTGGTGTTGGC+TGG - Chr8:5381240-5381259 None:intergenic 40.0%
AATCGCAGCAGTTAGTATCC+TGG + Chr8:5380988-5381007 MsG0880042206.01.T01:CDS 45.0%
ACGAACAACTGTTGAGGACA+TGG + Chr8:5382227-5382246 MsG0880042206.01.T01:CDS 45.0%
ACTAACTGGGGTCAGCTAAA+TGG - Chr8:5379682-5379701 None:intergenic 45.0%
AGACATAGGCTTATACGCAC+AGG + Chr8:5381130-5381149 MsG0880042206.01.T01:CDS 45.0%
AGATCGTGAGTGCAATAGAC+TGG + Chr8:5380275-5380294 MsG0880042206.01.T01:intron 45.0%
ATTTAGCTGACCCCAGTTAG+TGG + Chr8:5379681-5379700 MsG0880042206.01.T01:intron 45.0%
ATTTGGCATTAGTCCAGGCA+AGG + Chr8:5382028-5382047 MsG0880042206.01.T01:CDS 45.0%
CAACAAATCGCTGCAACTGT+TGG + Chr8:5379056-5379075 MsG0880042206.01.T01:intron 45.0%
CAGCAGTTAGTATCCTGGAT+TGG + Chr8:5380993-5381012 MsG0880042206.01.T01:CDS 45.0%
CAGTGTAGTAGGTGTAGTAG+GGG + Chr8:5380159-5380178 MsG0880042206.01.T01:intron 45.0%
CGACACAGATGGTTGTGATT+TGG - Chr8:5381495-5381514 None:intergenic 45.0%
CTATAGTCTAGATGTGTGGC+GGG + Chr8:5380729-5380748 MsG0880042206.01.T01:intron 45.0%
GATCGTGAGTGCAATAGACT+GGG + Chr8:5380276-5380295 MsG0880042206.01.T01:intron 45.0%
GCAACAACAAACCGTTCAGA+TGG + Chr8:5378970-5378989 MsG0880042206.01.T01:CDS 45.0%
GCATCAGTCTCAAGTTTGGA+GGG - Chr8:5381650-5381669 None:intergenic 45.0%
GCTATAGTCTAGATGTGTGG+CGG + Chr8:5380728-5380747 MsG0880042206.01.T01:intron 45.0%
GCTTATACGCACAGGATACA+AGG + Chr8:5381138-5381157 MsG0880042206.01.T01:CDS 45.0%
GGTTGTCTTAGAGAGTAGGT+AGG + Chr8:5380371-5380390 MsG0880042206.01.T01:intron 45.0%
GTCAGTGTAGTAGGTGTAGT+AGG + Chr8:5380157-5380176 MsG0880042206.01.T01:intron 45.0%
GTGATGTTCTATAGCGAGGT+TGG - Chr8:5380886-5380905 None:intergenic 45.0%
GTGGTTGTTAGGGTTTGAGT+TGG + Chr8:5379204-5379223 MsG0880042206.01.T01:CDS 45.0%
TGCATCAGTCTCAAGTTTGG+AGG - Chr8:5381651-5381670 None:intergenic 45.0%
TGCTGGTGTCTGGAGAATAA+AGG + Chr8:5382176-5382195 MsG0880042206.01.T01:CDS 45.0%
TTAGAGAGTAGGTAGGCAGT+AGG + Chr8:5380378-5380397 MsG0880042206.01.T01:intron 45.0%
TTCGTCAAACTCTGCAAAGG+CGG - Chr8:5379346-5379365 None:intergenic 45.0%
TTCTGCTGATGTGTTGGGAT+TGG + Chr8:5379270-5379289 MsG0880042206.01.T01:CDS 45.0%
TTGTCAAATAGCGGCTACAG+TGG - Chr8:5380017-5380036 None:intergenic 45.0%
TTTAGCTGACCCCAGTTAGT+GGG + Chr8:5379682-5379701 MsG0880042206.01.T01:intron 45.0%
! ATCGTCTTCGCGGCTTTATA+GGG + Chr8:5379156-5379175 MsG0880042206.01.T01:CDS 45.0%
! CATGTCAGTGTTTTCGATCG+TGG + Chr8:5379849-5379868 MsG0880042206.01.T01:intron 45.0%
! GCGGCTTTATAGGGTGATTA+GGG + Chr8:5379165-5379184 MsG0880042206.01.T01:CDS 45.0%
! GGATGATTTGGCATTAGTCC+AGG + Chr8:5382023-5382042 MsG0880042206.01.T01:CDS 45.0%
!! AATGGCAACAAAGGGGTGTT+CGG + Chr8:5381098-5381117 MsG0880042206.01.T01:CDS 45.0%
!! ACGCCAGGTGGATTGATATT+CGG + Chr8:5379305-5379324 MsG0880042206.01.T01:CDS 45.0%
!! GGGTGTTTTTAATTGGTGGG+TGG + Chr8:5379185-5379204 MsG0880042206.01.T01:CDS 45.0%
!! GTTGGTTCTGCTGATGTGTT+GGG + Chr8:5379265-5379284 MsG0880042206.01.T01:CDS 45.0%
!! TAGTATCCTGGATTGGCCAA+AGG + Chr8:5381000-5381019 MsG0880042206.01.T01:CDS 45.0%
!! TGATGTGTTGGGATTGGTTG+CGG + Chr8:5379276-5379295 MsG0880042206.01.T01:CDS 45.0%
ACATCAGCAGAACCAACCGA+TGG - Chr8:5379262-5379281 None:intergenic 50.0%
ATAAAGGCCCTAGAGGAGAG+TGG + Chr8:5382192-5382211 MsG0880042206.01.T01:CDS 50.0%
ATACGCACAGGATACAAGGC+AGG + Chr8:5381142-5381161 MsG0880042206.01.T01:CDS 50.0%
CCTGCTGTTCAACCTCAAAG+TGG - Chr8:5382116-5382135 None:intergenic 50.0%
CTGGAGAATAAAGGCCCTAG+AGG + Chr8:5382185-5382204 MsG0880042206.01.T01:CDS 50.0%
GAGGTTGAACAGCAGGTGAA+TGG + Chr8:5382120-5382139 MsG0880042206.01.T01:CDS 50.0%
GATTAGGCCTGTTGCTAGTG+TGG + Chr8:5379447-5379466 MsG0880042206.01.T01:CDS 50.0%
GGCATGAAACAAAGGGGACA+GGG - Chr8:5380576-5380595 None:intergenic 50.0%
GTATCCGTTGATGTTACCGG+AGG + Chr8:5378924-5378943 MsG0880042206.01.T01:CDS 50.0%
GTGCTGTGAGTCAGTGTAGT+AGG + Chr8:5380148-5380167 MsG0880042206.01.T01:intron 50.0%
TCAATGGAACTGCTGGTGTC+TGG + Chr8:5382166-5382185 MsG0880042206.01.T01:CDS 50.0%
TCCACCTCCGGTAACATCAA+CGG - Chr8:5378931-5378950 None:intergenic 50.0%
TGGCATGAAACAAAGGGGAC+AGG - Chr8:5380577-5380596 None:intergenic 50.0%
TTACAAATGCCCACCTTGCC+TGG - Chr8:5382044-5382063 None:intergenic 50.0%
TTCTCTCCTTTGGCCAATCC+AGG - Chr8:5381009-5381028 None:intergenic 50.0%
! CATCGTCTTCGCGGCTTTAT+AGG + Chr8:5379155-5379174 MsG0880042206.01.T01:CDS 50.0%
! CGCGGCTTTATAGGGTGATT+AGG + Chr8:5379164-5379183 MsG0880042206.01.T01:CDS 50.0%
! GAGCTGATTCATCGTCTTCG+CGG + Chr8:5379146-5379165 MsG0880042206.01.T01:CDS 50.0%
!! CCACTTTGAGGTTGAACAGC+AGG + Chr8:5382113-5382132 MsG0880042206.01.T01:CDS 50.0%
!! CGCCAGGTGGATTGATATTC+GGG + Chr8:5379306-5379325 MsG0880042206.01.T01:CDS 50.0%
!! GGTTGGTTCTGCTGATGTGT+TGG + Chr8:5379264-5379283 MsG0880042206.01.T01:CDS 50.0%
!! TGGGAGTGTTGAGAGTGTGA+TGG + Chr8:5379480-5379499 MsG0880042206.01.T01:CDS 50.0%
AGAGTAGGTAGGCAGTAGGC+AGG + Chr8:5380382-5380401 MsG0880042206.01.T01:intron 55.0%
CGCCCGAATATCAATCCACC+TGG - Chr8:5379311-5379330 None:intergenic 55.0%
GCTGTTCGTGCTCATCTCTG+CGG + Chr8:5382255-5382274 MsG0880042206.01.T01:CDS 55.0%
GGCATTAGTCCAGGCAAGGT+GGG + Chr8:5382032-5382051 MsG0880042206.01.T01:CDS 55.0%
GTTGATGTTACCGGAGGTGG+AGG + Chr8:5378930-5378949 MsG0880042206.01.T01:CDS 55.0%
TCAGCAGAACCAACCGATGG+CGG - Chr8:5379259-5379278 None:intergenic 55.0%
TCCGTTGATGTTACCGGAGG+TGG + Chr8:5378927-5378946 MsG0880042206.01.T01:CDS 55.0%
TGGCATTAGTCCAGGCAAGG+TGG + Chr8:5382031-5382050 MsG0880042206.01.T01:CDS 55.0%
TTCGTGCTCATCTCTGCGGA+TGG + Chr8:5382259-5382278 MsG0880042206.01.T01:CDS 55.0%
! CATTTTAGGCCGCCATCGGT+TGG + Chr8:5379247-5379266 MsG0880042206.01.T01:CDS 55.0%
! CTGGCATTTTAGGCCGCCAT+CGG + Chr8:5379243-5379262 MsG0880042206.01.T01:CDS 55.0%
! GGAAGGCACACCCTCAATTG+AGG + Chr8:5381415-5381434 MsG0880042206.01.T01:intron 55.0%
! TGGTTGCGGTGTTTTACGCC+AGG + Chr8:5379290-5379309 MsG0880042206.01.T01:CDS 55.0%
! TTGCGGTGTTTTACGCCAGG+TGG + Chr8:5379293-5379312 MsG0880042206.01.T01:CDS 55.0%
AACAAAGGGGACAGGGTGCG+TGG - Chr8:5380569-5380588 None:intergenic 60.0%
AAGGCCCTAGAGGAGAGTGG+CGG + Chr8:5382195-5382214 MsG0880042206.01.T01:CDS 60.0%
GATGTTACCGGAGGTGGAGG+AGG + Chr8:5378933-5378952 MsG0880042206.01.T01:CDS 60.0%
ACCAGCCGCCACTCTCCTCT+AGG - Chr8:5382203-5382222 None:intergenic 65.0%
CCAGCCGCCACTCTCCTCTA+GGG - Chr8:5382202-5382221 None:intergenic 65.0%
GTTACCGGAGGTGGAGGAGG+AGG + Chr8:5378936-5378955 MsG0880042206.01.T01:CDS 65.0%
TCCTCCTCCTCCTCCACCTC+CGG - Chr8:5378943-5378962 None:intergenic 65.0%
ACCGGAGGTGGAGGAGGAGG+AGG + Chr8:5378939-5378958 MsG0880042206.01.T01:CDS 70.0%
CCCTAGAGGAGAGTGGCGGC+TGG + Chr8:5382199-5382218 MsG0880042206.01.T01:CDS 70.0%
GGAGGTGGAGGAGGAGGAGG+AGG + Chr8:5378942-5378961 MsG0880042206.01.T01:CDS 70.0%
GGTGGAGGAGGAGGAGGAGG+AGG + Chr8:5378945-5378964 MsG0880042206.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 5378804 5382338 5378804 ID=MsG0880042206.01;Name=MsG0880042206.01
Chr8 mRNA 5378804 5382338 5378804 ID=MsG0880042206.01.T01;Parent=MsG0880042206.01;Name=MsG0880042206.01.T01;_AED=0.40;_eAED=0.42;_QI=0|0.33|0.25|1|1|1|4|0|420
Chr8 exon 5378804 5378996 5378804 ID=MsG0880042206.01.T01:exon:889;Parent=MsG0880042206.01.T01
Chr8 exon 5379116 5379559 5379116 ID=MsG0880042206.01.T01:exon:890;Parent=MsG0880042206.01.T01
Chr8 exon 5380978 5381282 5380978 ID=MsG0880042206.01.T01:exon:891;Parent=MsG0880042206.01.T01
Chr8 exon 5382018 5382338 5382018 ID=MsG0880042206.01.T01:exon:892;Parent=MsG0880042206.01.T01
Chr8 CDS 5378804 5378996 5378804 ID=MsG0880042206.01.T01:cds;Parent=MsG0880042206.01.T01
Chr8 CDS 5379116 5379559 5379116 ID=MsG0880042206.01.T01:cds;Parent=MsG0880042206.01.T01
Chr8 CDS 5380978 5381282 5380978 ID=MsG0880042206.01.T01:cds;Parent=MsG0880042206.01.T01
Chr8 CDS 5382018 5382338 5382018 ID=MsG0880042206.01.T01:cds;Parent=MsG0880042206.01.T01
Gene Sequence

>MsG0880042206.01.T01

ATGTCTCGTGCACCAAATTACGAGTTTCAAGAATGGTGGAACAAACAAAGAGAAAAAGAAAATCTAGATTTATTCGAAGATAATAATAAATCAGATCAATGTCAATCTTCTTCTCCATTTGTATCCGTTGATGTTACCGGAGGTGGAGGAGGAGGAGGAGGAGGAAGCAACAACAAACCGTTCAGATGGATCGCGAATAGACGAGTTTTATCGCGTGATTCGCGAGCTGATTCATCGTCTTCGCGGCTTTATAGGGTGATTAGGGTGTTTTTAATTGGTGGGTGGTTGTTAGGGTTTGAGTTGGTTGCATATTTTAAAGGCTGGCATTTTAGGCCGCCATCGGTTGGTTCTGCTGATGTGTTGGGATTGGTTGCGGTGTTTTACGCCAGGTGGATTGATATTCGGGCGAATTATTTGGCGCCGCCTTTGCAGAGTTTGACGAATATGTGTATTGTGCTTTTCATTGTGCAATCTGTGGATAGGATTGTTTTGATTTTGGGGTGTTTTTGGATCAAGTTTAGGAGGATTAGGCCTGTTGCTAGTGTGGATTATGATGATGGGAGTGTTGAGAGTGTGATGGATTATCCTATGGTTTTGGTTCAGATTCCTATGTGTAATGAAAGGGAGGTAAGAACATGTTTACCATCAATCGCAGCAGTTAGTATCCTGGATTGGCCAAAGGAGAGAATGCTTGTACAAGTTCTTGATGATTCGGATGAAGTAGATATCCAAAACCTTATCAAGGCAGAAGTGCATAAATGGCAACAAAGGGGTGTTCGGATCATATATAGACATAGGCTTATACGCACAGGATACAAGGCAGGAAATCTTAAATCCGCAATGAGTTGTGATTATGTTAAGGATTATGACTTTGTGGCAATATTTGATGCTGATTTCCAGCCAACACCAGATTTCTTAAAGAAGACGATACCTTATTTCAAGGGAAGGGATGATTTGGCATTAGTCCAGGCAAGGTGGGCATTTGTAAACAAGGATGAGAACTTGCTTACAAGATTACAGAATATCAATTTATCGTTCCACTTTGAGGTTGAACAGCAGGTGAATGGTATCTTTATTGACTTCTTTGGTTTCAATGGAACTGCTGGTGTCTGGAGAATAAAGGCCCTAGAGGAGAGTGGCGGCTGGTTAGAACGAACAACTGTTGAGGACATGGACATTGCTGTTCGTGCTCATCTCTGCGGATGGAAGTTTATTTTTCTCAATGATGTTAAGGTGTGCTATATTTCAAATCTTGAGGCTTAA

Protein sequence

>MsG0880042206.01.T01

MSRAPNYEFQEWWNKQREKENLDLFEDNNKSDQCQSSSPFVSVDVTGGGGGGGGGSNNKPFRWIANRRVLSRDSRADSSSSRLYRVIRVFLIGGWLLGFELVAYFKGWHFRPPSVGSADVLGLVAVFYARWIDIRANYLAPPLQSLTNMCIVLFIVQSVDRIVLILGCFWIKFRRIRPVASVDYDDGSVESVMDYPMVLVQIPMCNEREVRTCLPSIAAVSILDWPKERMLVQVLDDSDEVDIQNLIKAEVHKWQQRGVRIIYRHRLIRTGYKAGNLKSAMSCDYVKDYDFVAIFDADFQPTPDFLKKTIPYFKGRDDLALVQARWAFVNKDENLLTRLQNINLSFHFEVEQQVNGIFIDFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKVCYISNLEA*