Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046535.01.T03 | RQP00652.1 | 94.03 | 67 | 4 | 0 | 1 | 67 | 156 | 222 | 5.72E-35 | 127 |
MsG0880046535.01.T02 | XP_013457993.1 | 97.653 | 426 | 10 | 0 | 1 | 426 | 33 | 458 | 0 | 844 |
MsG0880046535.01.T05 | RQP00653.1 | 91.111 | 45 | 4 | 0 | 1 | 45 | 228 | 272 | 4.15E-18 | 84.7 |
MsG0880046535.01.T04 | RQP00652.1 | 93.651 | 63 | 4 | 0 | 1 | 63 | 160 | 222 | 2.39E-31 | 118 |
MsG0880046535.01.T01 | XP_013457993.1 | 97.391 | 460 | 10 | 1 | 1 | 460 | 1 | 458 | 0 | 900 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046535.01.T01 | Q9SIK7 | 59.243 | 449 | 120 | 8 | 15 | 460 | 9 | 397 | 1.30E-155 | 449 |
MsG0880046535.01.T02 | Q9SIK7 | 58.741 | 429 | 114 | 8 | 1 | 426 | 29 | 397 | 2.53E-143 | 417 |
MsG0880046535.01.T03 | Q9SIK7 | 83.582 | 67 | 11 | 0 | 1 | 67 | 331 | 397 | 2.07E-31 | 115 |
MsG0880046535.01.T04 | Q9SIK7 | 84.127 | 63 | 10 | 0 | 1 | 63 | 335 | 397 | 6.69E-29 | 108 |
MsG0880046535.01.T05 | Q9SIK7 | 80 | 45 | 9 | 0 | 1 | 45 | 353 | 397 | 1.02E-16 | 73.9 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046535.01.T01 | A0A072UQB9 | 97.391 | 460 | 10 | 1 | 1 | 460 | 1 | 458 | 0.0 | 900 |
MsG0880046535.01.T02 | A0A072UQB9 | 97.653 | 426 | 10 | 0 | 1 | 426 | 33 | 458 | 0.0 | 844 |
MsG0880046535.01.T03 | A0A072UQB9 | 98.507 | 67 | 1 | 0 | 1 | 67 | 392 | 458 | 3.00e-34 | 130 |
MsG0880046535.01.T03 | A0A3N7GZ60 | 94.030 | 67 | 4 | 0 | 1 | 67 | 156 | 222 | 2.73e-35 | 127 |
MsG0880046535.01.T04 | A0A3N7GZ60 | 93.651 | 63 | 4 | 0 | 1 | 63 | 160 | 222 | 1.14e-31 | 118 |
MsG0880046535.01.T05 | A0A3N7G1G4 | 91.111 | 45 | 4 | 0 | 1 | 45 | 228 | 272 | 1.98e-18 | 84.7 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048058.01 | MsG0880046535.01 | 0.818454 | 1.943517e-52 | 1.455574e-49 |
MsG0080048461.01 | MsG0880046535.01 | 0.802682 | 4.995451e-49 | 2.462294e-46 |
MsG0180000001.01 | MsG0880046535.01 | 0.802872 | 4.565035e-49 | 2.261058e-46 |
MsG0180000101.01 | MsG0880046535.01 | 0.825017 | 5.893906e-54 | 5.308633e-51 |
MsG0180000144.01 | MsG0880046535.01 | 0.817905 | 2.586924e-52 | 1.908165e-49 |
MsG0180000146.01 | MsG0880046535.01 | 0.804677 | 1.925795e-49 | 9.990874e-47 |
MsG0180000176.01 | MsG0880046535.01 | 0.809562 | 1.779971e-50 | 1.048541e-47 |
MsG0180000235.01 | MsG0880046535.01 | 0.806404 | 8.363415e-50 | 4.535348e-47 |
MsG0180000332.01 | MsG0880046535.01 | 0.814272 | 1.676719e-51 | 1.120009e-48 |
MsG0180000555.01 | MsG0880046535.01 | 0.827171 | 1.812729e-54 | 1.736465e-51 |
MsG0180000741.01 | MsG0880046535.01 | 0.812490 | 4.130999e-51 | 2.630237e-48 |
MsG0180000982.01 | MsG0880046535.01 | 0.806961 | 6.380078e-50 | 3.509727e-47 |
MsG0180001173.01 | MsG0880046535.01 | 0.803675 | 3.113582e-49 | 1.574124e-46 |
MsG0180001312.01 | MsG0880046535.01 | 0.830466 | 2.891167e-55 | 3.048234e-52 |
MsG0180001315.01 | MsG0880046535.01 | 0.829521 | 4.914810e-55 | 5.042274e-52 |
MsG0180001570.01 | MsG0880046535.01 | 0.802153 | 6.421142e-49 | 3.122642e-46 |
MsG0180001922.01 | MsG0880046535.01 | 0.811741 | 6.014468e-51 | 3.752915e-48 |
MsG0180002071.01 | MsG0880046535.01 | 0.800401 | 1.466254e-48 | 6.820935e-46 |
MsG0180002709.01 | MsG0880046535.01 | 0.809327 | 1.998791e-50 | 1.170100e-47 |
MsG0880044075.01 | MsG0880046535.01 | 0.827640 | 1.399572e-54 | 1.358958e-51 |
MsG0880044546.01 | MsG0880046535.01 | 0.847314 | 1.250872e-59 | 2.214183e-56 |
MsG0880044948.01 | MsG0880046535.01 | 0.806866 | 6.680369e-50 | 3.666062e-47 |
MsG0880044950.01 | MsG0880046535.01 | 0.824475 | 7.912730e-54 | 7.015869e-51 |
MsG0880045165.01 | MsG0880046535.01 | 0.822597 | 2.175946e-53 | 1.829710e-50 |
MsG0880045393.01 | MsG0880046535.01 | 0.820705 | 5.956093e-53 | 4.747646e-50 |
MsG0880045450.01 | MsG0880046535.01 | 0.810546 | 1.092268e-50 | 6.602834e-48 |
MsG0880045914.01 | MsG0880046535.01 | 0.801187 | 1.013413e-48 | 4.809186e-46 |
MsG0880046047.01 | MsG0880046535.01 | 0.851990 | 6.191005e-61 | 1.275031e-57 |
MsG0880046113.01 | MsG0880046535.01 | 0.813307 | 2.735072e-51 | 1.779741e-48 |
MsG0880046404.01 | MsG0880046535.01 | 0.821118 | 4.785242e-53 | 3.858645e-50 |
MsG0880046535.01 | MsG0880046684.01 | 0.839990 | 1.138464e-57 | 1.599450e-54 |
MsG0880046535.01 | MsG0880046901.01 | 0.835544 | 1.577919e-56 | 1.935557e-53 |
MsG0880046535.01 | MsG0880047391.01 | 0.850070 | 2.153289e-60 | 4.167658e-57 |
MsG0880046535.01 | MsG0880047590.01 | 0.800238 | 1.583217e-48 | 7.334414e-46 |
MsG0880046535.01 | MsG0880047594.01 | 0.841859 | 3.680251e-58 | 5.479168e-55 |
MsG0880046535.01 | MsG0880047745.01 | 0.822446 | 2.359269e-53 | 1.975178e-50 |
MsG0180003031.01 | MsG0880046535.01 | 0.814262 | 1.685335e-51 | 1.125450e-48 |
MsG0180003181.01 | MsG0880046535.01 | 0.828000 | 1.146562e-54 | 1.125211e-51 |
MsG0180003190.01 | MsG0880046535.01 | 0.813306 | 2.736698e-51 | 1.780750e-48 |
MsG0180003303.01 | MsG0880046535.01 | 0.836806 | 7.541110e-57 | 9.609112e-54 |
MsG0180003725.01 | MsG0880046535.01 | 0.813360 | 2.662863e-51 | 1.735338e-48 |
MsG0180003744.01 | MsG0880046535.01 | 0.837131 | 6.229419e-57 | 8.015571e-54 |
MsG0180004050.01 | MsG0880046535.01 | 0.810197 | 1.299045e-50 | 7.780718e-48 |
MsG0180004056.01 | MsG0880046535.01 | 0.848385 | 6.338308e-60 | 1.161162e-56 |
MsG0180004252.01 | MsG0880046535.01 | 0.836507 | 8.984783e-57 | 1.134595e-53 |
MsG0180004372.01 | MsG0880046535.01 | 0.806387 | 8.430153e-50 | 4.569588e-47 |
MsG0180004598.01 | MsG0880046535.01 | 0.813943 | 1.981561e-51 | 1.311802e-48 |
MsG0180004645.01 | MsG0880046535.01 | 0.868527 | 6.113445e-66 | 2.218663e-62 |
MsG0180004730.01 | MsG0880046535.01 | 0.817799 | 2.733457e-52 | 2.010509e-49 |
MsG0180004996.01 | MsG0880046535.01 | 0.809748 | 1.623419e-50 | 9.610819e-48 |
MsG0180005228.01 | MsG0880046535.01 | 0.833322 | 5.699543e-56 | 6.541432e-53 |
MsG0180005398.01 | MsG0880046535.01 | 0.833265 | 5.890589e-56 | 6.748507e-53 |
MsG0180005445.01 | MsG0880046535.01 | 0.804739 | 1.869442e-49 | 9.714876e-47 |
MsG0180005765.01 | MsG0880046535.01 | 0.821798 | 3.333278e-53 | 2.739520e-50 |
MsG0180005985.01 | MsG0880046535.01 | 0.823615 | 1.259440e-53 | 1.089863e-50 |
MsG0180006050.01 | MsG0880046535.01 | 0.822414 | 2.399340e-53 | 2.006968e-50 |
MsG0180006098.01 | MsG0880046535.01 | 0.837184 | 6.038383e-57 | 7.782456e-54 |
MsG0280006368.01 | MsG0880046535.01 | 0.816075 | 6.667091e-52 | 4.677690e-49 |
MsG0780040312.01 | MsG0880046535.01 | 0.848339 | 6.529213e-60 | 1.194349e-56 |
MsG0780040344.01 | MsG0880046535.01 | 0.813048 | 3.118003e-51 | 2.014662e-48 |
MsG0780040411.01 | MsG0880046535.01 | 0.804332 | 2.273248e-49 | 1.168869e-46 |
MsG0780040691.01 | MsG0880046535.01 | 0.814055 | 1.871912e-51 | 1.243033e-48 |
MsG0780040742.01 | MsG0880046535.01 | 0.851999 | 6.155417e-61 | 1.268140e-57 |
MsG0780040845.01 | MsG0880046535.01 | 0.835191 | 1.936926e-56 | 2.351159e-53 |
MsG0780041065.01 | MsG0880046535.01 | 0.829040 | 6.431138e-55 | 6.504868e-52 |
MsG0780041310.01 | MsG0880046535.01 | 0.803356 | 3.625143e-49 | 1.817787e-46 |
MsG0780041370.01 | MsG0880046535.01 | 0.839373 | 1.647686e-57 | 2.270938e-54 |
MsG0780041376.01 | MsG0880046535.01 | 0.816854 | 4.461502e-52 | 3.197556e-49 |
MsG0780041754.01 | MsG0880046535.01 | 0.811457 | 6.935484e-51 | 4.295346e-48 |
MsG0780041796.01 | MsG0880046535.01 | 0.806796 | 6.913653e-50 | 3.787055e-47 |
MsG0880042206.01 | MsG0880046535.01 | 0.872051 | 4.280452e-67 | 1.765383e-63 |
MsG0880042329.01 | MsG0880046535.01 | 0.809041 | 2.301631e-50 | 1.337087e-47 |
MsG0880042518.01 | MsG0880046535.01 | 0.822287 | 2.568191e-53 | 2.140429e-50 |
MsG0880042552.01 | MsG0880046535.01 | 0.815007 | 1.152416e-51 | 7.852544e-49 |
MsG0880042760.01 | MsG0880046535.01 | 0.808911 | 2.453589e-50 | 1.420377e-47 |
MsG0880042792.01 | MsG0880046535.01 | 0.823121 | 1.642886e-53 | 1.402017e-50 |
MsG0880043162.01 | MsG0880046535.01 | 0.826675 | 2.382021e-54 | 2.249000e-51 |
MsG0880043341.01 | MsG0880046535.01 | 0.826427 | 2.729629e-54 | 2.559153e-51 |
MsG0880043532.01 | MsG0880046535.01 | 0.817027 | 4.079096e-52 | 2.937449e-49 |
MsG0880043533.01 | MsG0880046535.01 | 0.820723 | 5.900776e-53 | 4.705809e-50 |
MsG0880043804.01 | MsG0880046535.01 | 0.806144 | 9.485115e-50 | 5.109895e-47 |
MsG0280010816.01 | MsG0880046535.01 | 0.816681 | 4.878533e-52 | 3.479784e-49 |
MsG0280010901.01 | MsG0880046535.01 | 0.828077 | 1.098756e-54 | 1.080710e-51 |
MsG0280010976.01 | MsG0880046535.01 | 0.855183 | 7.486561e-62 | 1.713573e-58 |
MsG0280011075.01 | MsG0880046535.01 | 0.805300 | 1.427111e-49 | 7.523332e-47 |
MsG0280011410.01 | MsG0880046535.01 | 0.804720 | 1.886561e-49 | 9.798713e-47 |
MsG0380011537.01 | MsG0880046535.01 | 0.806848 | 6.737951e-50 | 3.696020e-47 |
MsG0380011729.01 | MsG0880046535.01 | 0.822679 | 2.082599e-53 | 1.755157e-50 |
MsG0380012020.01 | MsG0880046535.01 | 0.808232 | 3.426430e-50 | 1.948609e-47 |
MsG0380012057.01 | MsG0880046535.01 | 0.815566 | 8.657052e-52 | 5.989684e-49 |
MsG0380012124.01 | MsG0880046535.01 | 0.825016 | 5.897944e-54 | 5.312038e-51 |
MsG0380012458.01 | MsG0880046535.01 | 0.837703 | 4.446010e-57 | 5.823200e-54 |
MsG0380014138.01 | MsG0880046535.01 | 0.813187 | 2.905616e-51 | 1.884458e-48 |
MsG0380014365.01 | MsG0880046535.01 | 0.816190 | 6.284003e-52 | 4.422715e-49 |
MsG0380014489.01 | MsG0880046535.01 | 0.823624 | 1.252795e-53 | 1.084437e-50 |
MsG0380014541.01 | MsG0880046535.01 | 0.853451 | 2.369377e-61 | 5.121824e-58 |
MsG0380014701.01 | MsG0880046535.01 | 0.802731 | 4.880817e-49 | 2.408871e-46 |
MsG0680030841.01 | MsG0880046535.01 | 0.834066 | 3.714690e-56 | 4.359250e-53 |
MsG0680031133.01 | MsG0880046535.01 | 0.800438 | 1.440924e-48 | 6.709505e-46 |
MsG0680031301.01 | MsG0880046535.01 | 0.804766 | 1.845099e-49 | 9.594636e-47 |
MsG0680034067.01 | MsG0880046535.01 | 0.817967 | 2.505437e-52 | 1.851156e-49 |
MsG0680034757.01 | MsG0880046535.01 | 0.822289 | 2.564736e-53 | 2.137678e-50 |
MsG0680035476.01 | MsG0880046535.01 | 0.811888 | 5.587305e-51 | 3.499833e-48 |
MsG0480018460.01 | MsG0880046535.01 | 0.800761 | 1.238144e-48 | 5.812441e-46 |
MsG0480018462.01 | MsG0880046535.01 | 0.810710 | 1.006801e-50 | 6.113255e-48 |
MsG0480018479.01 | MsG0880046535.01 | 0.863216 | 2.915680e-64 | 8.772132e-61 |
MsG0480019289.01 | MsG0880046535.01 | 0.812170 | 4.851644e-51 | 3.062564e-48 |
MsG0480020416.01 | MsG0880046535.01 | 0.844000 | 9.911918e-59 | 1.578448e-55 |
MsG0480020675.01 | MsG0880046535.01 | 0.811335 | 7.371367e-51 | 4.550278e-48 |
MsG0480020791.01 | MsG0880046535.01 | 0.833874 | 4.150525e-56 | 4.843138e-53 |
MsG0480021204.01 | MsG0880046535.01 | 0.822199 | 2.691681e-53 | 2.237563e-50 |
MsG0480021240.01 | MsG0880046535.01 | 0.817806 | 2.724525e-52 | 2.004306e-49 |
MsG0480021432.01 | MsG0880046535.01 | 0.805234 | 1.473084e-49 | 7.752579e-47 |
MsG0480021695.01 | MsG0880046535.01 | 0.801404 | 9.147684e-49 | 4.364850e-46 |
MsG0480021917.01 | MsG0880046535.01 | 0.805790 | 1.126038e-49 | 6.011677e-47 |
MsG0480022026.01 | MsG0880046535.01 | 0.833059 | 6.628057e-56 | 7.547327e-53 |
MsG0480022104.01 | MsG0880046535.01 | 0.807966 | 3.904914e-50 | 2.205055e-47 |
MsG0480022108.01 | MsG0880046535.01 | 0.819021 | 1.445177e-52 | 1.099428e-49 |
MsG0480022207.01 | MsG0880046535.01 | 0.804126 | 2.508394e-49 | 1.283020e-46 |
MsG0480022318.01 | MsG0880046535.01 | 0.818168 | 2.255920e-52 | 1.676090e-49 |
MsG0480022464.01 | MsG0880046535.01 | 0.817663 | 2.933606e-52 | 2.149645e-49 |
MsG0480022552.01 | MsG0880046535.01 | 0.848493 | 5.916361e-60 | 1.087799e-56 |
MsG0480022678.01 | MsG0880046535.01 | 0.814219 | 1.722441e-51 | 1.148848e-48 |
MsG0480022717.01 | MsG0880046535.01 | 0.818782 | 1.637956e-52 | 1.237775e-49 |
MsG0480022719.01 | MsG0880046535.01 | 0.804759 | 1.851478e-49 | 9.626120e-47 |
MsG0480023025.01 | MsG0880046535.01 | 0.838967 | 2.099000e-57 | 2.856973e-54 |
MsG0480023224.01 | MsG0880046535.01 | 0.818699 | 1.710699e-52 | 1.289713e-49 |
MsG0480023718.01 | MsG0880046535.01 | 0.813550 | 2.418477e-51 | 1.584227e-48 |
MsG0580024251.01 | MsG0880046535.01 | 0.837167 | 6.096886e-57 | 7.853970e-54 |
MsG0580024274.01 | MsG0880046535.01 | 0.833584 | 4.904394e-56 | 5.672625e-53 |
MsG0580024311.01 | MsG0880046535.01 | 0.813118 | 3.009111e-51 | 1.947883e-48 |
MsG0580024339.01 | MsG0880046535.01 | 0.810592 | 1.067914e-50 | 6.463615e-48 |
MsG0580024353.01 | MsG0880046535.01 | 0.809008 | 2.339088e-50 | 1.357628e-47 |
MsG0580024409.01 | MsG0880046535.01 | 0.823485 | 1.350140e-53 | 1.164068e-50 |
MsG0580024618.01 | MsG0880046535.01 | 0.808733 | 2.679455e-50 | 1.543775e-47 |
MsG0580024727.01 | MsG0880046535.01 | 0.808921 | 2.441439e-50 | 1.413733e-47 |
MsG0580024960.01 | MsG0880046535.01 | 0.823388 | 1.423176e-53 | 1.223521e-50 |
MsG0580025025.01 | MsG0880046535.01 | 0.805561 | 1.257891e-49 | 6.675781e-47 |
MsG0580025237.01 | MsG0880046535.01 | 0.805608 | 1.229741e-49 | 6.534321e-47 |
MsG0580025520.01 | MsG0880046535.01 | 0.804592 | 2.006465e-49 | 1.038646e-46 |
MsG0580025532.01 | MsG0880046535.01 | 0.802251 | 6.129112e-49 | 2.988130e-46 |
MsG0580025749.01 | MsG0880046535.01 | 0.811807 | 5.820289e-51 | 3.637958e-48 |
MsG0580025758.01 | MsG0880046535.01 | 0.800318 | 1.524527e-48 | 7.077261e-46 |
MsG0580025907.01 | MsG0880046535.01 | 0.811054 | 8.482313e-51 | 5.197831e-48 |
MsG0580025922.01 | MsG0880046535.01 | 0.809442 | 1.888523e-50 | 1.108926e-47 |
MsG0580025989.01 | MsG0880046535.01 | 0.812716 | 3.685306e-51 | 2.360408e-48 |
MsG0380015300.01 | MsG0880046535.01 | 0.813938 | 1.986636e-51 | 1.315000e-48 |
MsG0380015436.01 | MsG0880046535.01 | 0.844374 | 7.864869e-59 | 1.267114e-55 |
MsG0380015564.01 | MsG0880046535.01 | 0.832686 | 8.203925e-56 | 9.237764e-53 |
MsG0380015607.01 | MsG0880046535.01 | 0.842235 | 2.926108e-58 | 4.408180e-55 |
MsG0380015771.01 | MsG0880046535.01 | 0.815646 | 8.310538e-52 | 5.762816e-49 |
MsG0380016055.01 | MsG0880046535.01 | 0.816083 | 6.639807e-52 | 4.659563e-49 |
MsG0380016187.01 | MsG0880046535.01 | 0.802981 | 4.334963e-49 | 2.152934e-46 |
MsG0380016209.01 | MsG0880046535.01 | 0.828729 | 7.646516e-55 | 7.664176e-52 |
MsG0380016561.01 | MsG0880046535.01 | 0.811632 | 6.353756e-51 | 3.952923e-48 |
MsG0380016752.01 | MsG0880046535.01 | 0.800066 | 1.715445e-48 | 7.912563e-46 |
MsG0380016923.01 | MsG0880046535.01 | 0.806707 | 7.216244e-50 | 3.943836e-47 |
MsG0380017038.01 | MsG0880046535.01 | 0.804517 | 2.079981e-49 | 1.074566e-46 |
MsG0380017039.01 | MsG0880046535.01 | 0.815687 | 8.135427e-52 | 5.647633e-49 |
MsG0380017210.01 | MsG0880046535.01 | 0.827031 | 1.957886e-54 | 1.867754e-51 |
MsG0380017401.01 | MsG0880046535.01 | 0.838035 | 3.652014e-57 | 4.832047e-54 |
MsG0380017719.01 | MsG0880046535.01 | 0.814802 | 1.280025e-51 | 8.673486e-49 |
MsG0380017797.01 | MsG0880046535.01 | 0.811990 | 5.310774e-51 | 3.335917e-48 |
MsG0480018117.01 | MsG0880046535.01 | 0.800654 | 1.302006e-48 | 6.095910e-46 |
MsG0580026460.01 | MsG0880046535.01 | 0.844410 | 7.689966e-59 | 1.240359e-55 |
MsG0580026664.01 | MsG0880046535.01 | 0.810030 | 1.411714e-50 | 8.419468e-48 |
MsG0580029630.01 | MsG0880046535.01 | 0.823893 | 1.084019e-53 | 9.454865e-51 |
MsG0580029647.01 | MsG0880046535.01 | 0.829920 | 3.930286e-55 | 4.079504e-52 |
MsG0580029658.01 | MsG0880046535.01 | 0.839825 | 1.256927e-57 | 1.756587e-54 |
MsG0580030003.01 | MsG0880046535.01 | 0.801452 | 8.946154e-49 | 4.273828e-46 |
MsG0680030321.01 | MsG0880046535.01 | 0.825506 | 4.516807e-54 | 4.124806e-51 |
MsG0680030684.01 | MsG0880046535.01 | 0.858276 | 9.207423e-63 | 2.337128e-59 |
MsG0280006462.01 | MsG0880046535.01 | 0.854434 | 1.233758e-61 | 2.754953e-58 |
MsG0280006473.01 | MsG0880046535.01 | 0.800149 | 1.649966e-48 | 7.626499e-46 |
MsG0280006935.01 | MsG0880046535.01 | 0.819768 | 9.766789e-53 | 7.585707e-50 |
MsG0280007087.01 | MsG0880046535.01 | 0.837109 | 6.308431e-57 | 8.112170e-54 |
MsG0280007109.01 | MsG0880046535.01 | 0.815972 | 7.029143e-52 | 4.917641e-49 |
MsG0280007496.01 | MsG0880046535.01 | 0.818485 | 1.913099e-52 | 1.433892e-49 |
MsG0280007745.01 | MsG0880046535.01 | 0.805540 | 1.270818e-49 | 6.740687e-47 |
MsG0280007775.01 | MsG0880046535.01 | 0.808368 | 3.205074e-50 | 1.829329e-47 |
MsG0280007992.01 | MsG0880046535.01 | 0.832842 | 7.502603e-56 | 8.487242e-53 |
MsG0280008363.01 | MsG0880046535.01 | 0.821362 | 4.203058e-53 | 3.412153e-50 |
MsG0280008502.01 | MsG0880046535.01 | 0.821311 | 4.319954e-53 | 3.502060e-50 |
MsG0280008758.01 | MsG0880046535.01 | 0.812493 | 4.124213e-51 | 2.626115e-48 |
MsG0280008970.01 | MsG0880046535.01 | 0.821215 | 4.545200e-53 | 3.675124e-50 |
MsG0280009054.01 | MsG0880046535.01 | 0.821129 | 4.756713e-53 | 3.836911e-50 |
MsG0280009739.01 | MsG0880046535.01 | 0.831546 | 1.569775e-55 | 1.709128e-52 |
MsG0280010153.01 | MsG0880046535.01 | 0.824202 | 9.169066e-54 | 8.067135e-51 |
MsG0280010531.01 | MsG0880046535.01 | 0.823565 | 1.293399e-53 | 1.117659e-50 |
MsG0280010533.01 | MsG0880046535.01 | 0.812152 | 4.895690e-51 | 3.088885e-48 |
MsG0780036430.01 | MsG0880046535.01 | 0.801726 | 7.859566e-49 | 3.780718e-46 |
MsG0780036845.01 | MsG0880046535.01 | 0.833710 | 4.560754e-56 | 5.294840e-53 |
MsG0780037755.01 | MsG0880046535.01 | 0.816250 | 6.092640e-52 | 4.295117e-49 |
MsG0780037975.01 | MsG0880046535.01 | 0.802463 | 5.543952e-49 | 2.717432e-46 |
MsG0780038603.01 | MsG0880046535.01 | 0.809830 | 1.558921e-50 | 9.248406e-48 |
MsG0780039452.01 | MsG0880046535.01 | 0.813001 | 3.192193e-51 | 2.060067e-48 |
MsG0780039587.01 | MsG0880046535.01 | 0.850917 | 1.245321e-60 | 2.477948e-57 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046535.01.T03 | MTR_4g109550 | 98.507 | 67 | 1 | 0 | 1 | 67 | 392 | 458 | 7.61e-38 | 130 |
MsG0880046535.01.T03 | MTR_7g087200 | 70.149 | 67 | 20 | 0 | 1 | 67 | 357 | 423 | 9.78e-26 | 97.4 |
MsG0880046535.01.T02 | MTR_4g109550 | 97.653 | 426 | 10 | 0 | 1 | 426 | 33 | 458 | 0.0 | 844 |
MsG0880046535.01.T02 | MTR_7g087200 | 46.544 | 434 | 190 | 7 | 1 | 426 | 24 | 423 | 7.90e-115 | 343 |
MsG0880046535.01.T05 | MTR_4g109550 | 97.778 | 45 | 1 | 0 | 1 | 45 | 414 | 458 | 5.36e-22 | 86.3 |
MsG0880046535.01.T05 | MTR_7g087200 | 62.222 | 45 | 17 | 0 | 1 | 45 | 379 | 423 | 1.48e-12 | 59.7 |
MsG0880046535.01.T04 | MTR_4g109550 | 98.413 | 63 | 1 | 0 | 1 | 63 | 396 | 458 | 1.94e-34 | 121 |
MsG0880046535.01.T04 | MTR_7g087200 | 69.841 | 63 | 19 | 0 | 1 | 63 | 361 | 423 | 3.43e-23 | 90.1 |
MsG0880046535.01.T01 | MTR_4g109550 | 97.391 | 460 | 10 | 1 | 1 | 460 | 1 | 458 | 0.0 | 900 |
MsG0880046535.01.T01 | MTR_7g087200 | 46.711 | 456 | 201 | 7 | 13 | 460 | 2 | 423 | 3.68e-124 | 368 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046535.01.T03 | AT2G29900 | 83.582 | 67 | 11 | 0 | 1 | 67 | 331 | 397 | 2.11e-32 | 115 |
MsG0880046535.01.T03 | AT1G08700 | 70.149 | 67 | 20 | 0 | 1 | 67 | 387 | 453 | 1.67e-26 | 99.8 |
MsG0880046535.01.T02 | AT2G29900 | 58.741 | 429 | 114 | 8 | 1 | 426 | 29 | 397 | 2.58e-144 | 417 |
MsG0880046535.01.T02 | AT1G08700 | 46.119 | 438 | 216 | 5 | 1 | 426 | 24 | 453 | 2.65e-114 | 342 |
MsG0880046535.01.T05 | AT2G29900 | 80.000 | 45 | 9 | 0 | 1 | 45 | 353 | 397 | 1.04e-17 | 73.9 |
MsG0880046535.01.T05 | AT1G08700 | 62.222 | 45 | 17 | 0 | 1 | 45 | 409 | 453 | 2.57e-13 | 61.6 |
MsG0880046535.01.T04 | AT2G29900 | 84.127 | 63 | 10 | 0 | 1 | 63 | 335 | 397 | 6.82e-30 | 108 |
MsG0880046535.01.T04 | AT1G08700 | 69.841 | 63 | 19 | 0 | 1 | 63 | 391 | 453 | 4.38e-24 | 92.8 |
MsG0880046535.01.T01 | AT2G29900 | 59.243 | 449 | 120 | 8 | 15 | 460 | 9 | 397 | 1.33e-156 | 449 |
MsG0880046535.01.T01 | AT1G08700 | 46.623 | 459 | 225 | 6 | 14 | 460 | 3 | 453 | 1.79e-124 | 370 |
Find 100 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGGGTATTTGGTGGTTAT+TGG | 0.173458 | 8:+74488697 | MsG0880046535.01.T01:CDS |
CGGCGTAACTTTGATGCTTT+TGG | 0.212062 | 8:+74489428 | MsG0880046535.01.T01:CDS |
TTGAATCTCTTGATGTTCTA+AGG | 0.238290 | 8:+74489558 | MsG0880046535.01.T01:CDS |
TTGGAATATTGGTTGCTTAT+TGG | 0.257176 | 8:+74488716 | MsG0880046535.01.T01:CDS |
TGTTGGGCCTTTGAGGCTTT+TGG | 0.259511 | 8:+74488819 | MsG0880046535.01.T01:CDS |
TTGAATTCTAGTAGCACTTA+TGG | 0.278667 | 8:+74489120 | MsG0880046535.01.T01:CDS |
TTTGGTGGTTATTGGAATAT+TGG | 0.308628 | 8:+74488705 | MsG0880046535.01.T01:CDS |
CGAAGATGATGAAGTTCTTC+GGG | 0.312188 | 8:-74488206 | MsG0880046536.01.T01:intron |
GAGAATTTGACTCCGCAAAA+TGG | 0.323418 | 8:+74489090 | MsG0880046535.01.T01:CDS |
AACAGTATTCGCGTCTGAAT+TGG | 0.328014 | 8:-74489049 | None:intergenic |
TGTTATCTTGCAATTATTGC+TGG | 0.331559 | 8:+74489402 | MsG0880046535.01.T01:CDS |
TTGAGGCTCGGAGGAGGTTA+TGG | 0.341362 | 8:+74488932 | MsG0880046535.01.T01:CDS |
CACTTATGGCACACGTAATC+TGG | 0.341865 | 8:+74489134 | MsG0880046535.01.T01:CDS |
TCGTCCGGTGCAATCAAGTT+GGG | 0.344040 | 8:+74489306 | MsG0880046535.01.T01:CDS |
AGATGAAGAAATTCCGGCTT+TGG | 0.353732 | 8:+74488861 | MsG0880046535.01.T01:CDS |
TGTTGCCTGTTGGGCCTTTG+AGG | 0.358383 | 8:+74488812 | MsG0880046535.01.T01:CDS |
CGGTGCAATCAAGTTGGGGC+TGG | 0.378912 | 8:+74489311 | MsG0880046535.01.T01:CDS |
AAACAACCTCAGATTCTTCC+TGG | 0.385389 | 8:+74488383 | MsG0880046535.01.T01:CDS |
ATTTGATGTTGGAGGGAATT+GGG | 0.386024 | 8:+74489277 | MsG0880046535.01.T01:CDS |
GTCGAGAGATGAAGAAATTC+CGG | 0.388325 | 8:+74488855 | MsG0880046535.01.T01:CDS |
ACAACCGTTCTCGATAGTTT+AGG | 0.389453 | 8:+74488235 | MsG0880046535.01.T01:CDS |
GGAATTGGGTTGGCTTCGTC+CGG | 0.389791 | 8:+74489291 | MsG0880046535.01.T01:CDS |
ATGGGCTATGCTTGTTGCTA+TGG | 0.393419 | 8:+74488765 | MsG0880046535.01.T01:CDS |
AAAAGCCTCAAAGGCCCAAC+AGG | 0.404482 | 8:-74488817 | None:intergenic |
CTTGCAATTATTGCTGGTCT+CGG | 0.408210 | 8:+74489408 | MsG0880046535.01.T01:CDS |
ACGAAGATGATGAAGTTCTT+CGG | 0.408406 | 8:-74488207 | MsG0880046536.01.T01:intron |
AACCCTCACTCGCCCCTCTT+CGG | 0.418914 | 8:-74489163 | None:intergenic |
AATTTGATGTTGGAGGGAAT+TGG | 0.425817 | 8:+74489276 | MsG0880046535.01.T01:CDS |
GTAATGATTGTATGGATCCT+AGG | 0.427565 | 8:+74488905 | MsG0880046535.01.T01:CDS |
ATAGCCCATGTTGTCCATTC+AGG | 0.440477 | 8:-74488751 | None:intergenic |
GATGTTGGAGGGAATTGGGT+TGG | 0.440644 | 8:+74489281 | MsG0880046535.01.T01:CDS |
GGTGCAATCAAGTTGGGGCT+GGG | 0.451418 | 8:+74489312 | MsG0880046535.01.T01:CDS |
AATTCCGGCTTTGGTTTATG+AGG | 0.454659 | 8:+74488870 | MsG0880046535.01.T01:CDS |
GTTCATACCATGATCAATCA+AGG | 0.458259 | 8:-74489214 | None:intergenic |
TTGGCTATGGTGGAGATTGT+TGG | 0.460324 | 8:-74488346 | MsG0880046536.01.T01:CDS |
TTCGTCCGGTGCAATCAAGT+TGG | 0.460955 | 8:+74489305 | MsG0880046535.01.T01:CDS |
ATTGTTACTTGAAGTATTTG+TGG | 0.464293 | 8:+74489524 | MsG0880046535.01.T01:CDS |
GCCGGTGAGTAATGATTGTA+TGG | 0.469926 | 8:+74488897 | MsG0880046535.01.T01:CDS |
AGGAACATGCAGATTGAAAC+GGG | 0.471161 | 8:-74488283 | MsG0880046536.01.T01:CDS |
TCTTCCTGGGACAAATTCCT+TGG | 0.471536 | 8:+74488397 | MsG0880046535.01.T01:CDS |
GGTTTACTATGTTGCCTGAA+TGG | 0.473916 | 8:+74488737 | MsG0880046535.01.T01:CDS |
AATGAGAATTTGATGTTGGA+GGG | 0.476969 | 8:+74489270 | MsG0880046535.01.T01:CDS |
CGGCTTTGGTTTATGAGGCT+AGG | 0.479275 | 8:+74488875 | MsG0880046535.01.T01:CDS |
AAATACTTCAAGTAACAATC+TGG | 0.480209 | 8:-74489520 | None:intergenic |
CACGTTCTTAAAACTCTACA+TGG | 0.480615 | 8:+74488504 | MsG0880046535.01.T01:CDS |
TTAGAACATCAAGAGATTCA+AGG | 0.489353 | 8:-74489556 | None:intergenic |
TTGATCATGGTATGAACATA+CGG | 0.491263 | 8:+74489220 | MsG0880046535.01.T01:CDS |
TGTTTCGTCGTATGCTATGT+TGG | 0.498669 | 8:-74488365 | None:intergenic |
GAGAGTGGAAATTCAGTGTT+GGG | 0.499101 | 8:+74488991 | MsG0880046535.01.T01:CDS |
TATGGATCCTAGGGTTATTG+AGG | 0.504044 | 8:+74488915 | MsG0880046535.01.T01:CDS |
GAGGAACATGCAGATTGAAA+CGG | 0.506157 | 8:-74488284 | MsG0880046536.01.T01:CDS |
TGCGCCAAGGAATTTGTCCC+AGG | 0.508030 | 8:-74488401 | None:intergenic |
GAGCCGAAGAGGGGCGAGTG+AGG | 0.518863 | 8:+74489160 | MsG0880046535.01.T01:CDS |
AAATGAGAATTTGATGTTGG+AGG | 0.519030 | 8:+74489269 | MsG0880046535.01.T01:CDS |
GCCACACCCTTGATTGATCA+TGG | 0.522462 | 8:+74489207 | MsG0880046535.01.T01:CDS |
TACATCGGAAATAGAAAAGA+AGG | 0.526485 | 8:-74488480 | None:intergenic |
TTTGGTTTATGAGGCTAGGC+CGG | 0.528177 | 8:+74488879 | MsG0880046535.01.T01:CDS |
GGAAATTCAGTGTTGGGTAG+TGG | 0.531080 | 8:+74488997 | MsG0880046535.01.T01:CDS |
GTCGTATGCTATGTTGGCTA+TGG | 0.532998 | 8:-74488359 | None:intergenic |
GTCAAATGAGAATTTGATGT+TGG | 0.534939 | 8:+74489266 | MsG0880046535.01.T01:CDS |
GGAGGTTATGGAGAGAGAGA+AGG | 0.538901 | 8:+74488944 | MsG0880046535.01.T01:CDS |
TAATGATTGTATGGATCCTA+GGG | 0.542578 | 8:+74488906 | MsG0880046535.01.T01:CDS |
TGTTACGCAAGGGTATTTGG+TGG | 0.548436 | 8:+74488690 | MsG0880046535.01.T01:CDS |
CTAGCCTCATAAACCAAAGC+CGG | 0.550345 | 8:-74488874 | None:intergenic |
TGAGAGTGGAAATTCAGTGT+TGG | 0.553481 | 8:+74488990 | MsG0880046535.01.T01:CDS |
AAGAAGGACTAAGAAGAAAG+TGG | 0.555246 | 8:-74488464 | None:intergenic |
ATCCTAGGGTTATTGAGGCT+CGG | 0.556002 | 8:+74488920 | MsG0880046535.01.T01:CDS |
AGTTCAACCAAAAGCCTCAA+AGG | 0.556702 | 8:-74488826 | None:intergenic |
GCTACTGACACAGGTAGAGC+AGG | 0.558581 | 8:-74489471 | None:intergenic |
GACGTGGCATCTTCTCCTCT+AGG | 0.558699 | 8:-74489246 | None:intergenic |
AGCCGAAGAGGGGCGAGTGA+GGG | 0.560291 | 8:+74489161 | MsG0880046535.01.T01:CDS |
GTATGCTATGTTGGCTATGG+TGG | 0.562828 | 8:-74488356 | None:intergenic |
GGGTTATTGAGGCTCGGAGG+AGG | 0.573137 | 8:+74488926 | MsG0880046535.01.T01:CDS |
CTACCTGTGTCAGTAGCACT+CGG | 0.576698 | 8:+74489477 | MsG0880046535.01.T01:CDS |
ACCATGATCAATCAAGGGTG+TGG | 0.578190 | 8:-74489208 | None:intergenic |
AACAACCTCAGATTCTTCCT+GGG | 0.578676 | 8:+74488384 | MsG0880046535.01.T01:CDS |
CAGCCCCAACTTGATTGCAC+CGG | 0.585675 | 8:-74489310 | None:intergenic |
TGTTGCCTGAATGGACAACA+TGG | 0.592608 | 8:+74488746 | MsG0880046535.01.T01:CDS |
TTCGCCTAAACTATCGAGAA+CGG | 0.593384 | 8:-74488239 | MsG0880046536.01.T01:intron |
TTCATACCATGATCAATCAA+GGG | 0.595522 | 8:-74489213 | None:intergenic |
CTCCGAGCCTCAATAACCCT+AGG | 0.598240 | 8:-74488922 | None:intergenic |
CGTCCGGTGCAATCAAGTTG+GGG | 0.600203 | 8:+74489307 | MsG0880046535.01.T01:CDS |
AATCTGGTAAGAGCCGAAGA+GGG | 0.604700 | 8:+74489150 | MsG0880046535.01.T01:CDS |
GCAGTTCTGATAACTGAGAG+TGG | 0.610868 | 8:+74488976 | MsG0880046535.01.T01:CDS |
TGATCATGGTATGAACATAC+GGG | 0.611284 | 8:+74489221 | MsG0880046535.01.T01:CDS |
TAATCTGGTAAGAGCCGAAG+AGG | 0.615589 | 8:+74489149 | MsG0880046535.01.T01:CDS |
TCCATACAATCATTACTCAC+CGG | 0.616281 | 8:-74488898 | None:intergenic |
TTTGTCCCAGGAAGAATCTG+AGG | 0.618330 | 8:-74488389 | None:intergenic |
ATCTGGTAAGAGCCGAAGAG+GGG | 0.630482 | 8:+74489151 | MsG0880046535.01.T01:CDS |
TGCAAGATAACATGCATACA+CGG | 0.630702 | 8:-74489391 | None:intergenic |
AATTCAGTGTTGGGTAGTGG+TGG | 0.633992 | 8:+74489000 | MsG0880046535.01.T01:CDS |
CATCAAATTCTCATTTGACG+TGG | 0.634032 | 8:-74489262 | None:intergenic |
ATACCGAGTGCTACTGACAC+AGG | 0.638732 | 8:-74489480 | None:intergenic |
GGCTTTGTATGATCTTGCTG+CGG | 0.639777 | 8:+74488786 | MsG0880046535.01.T01:CDS |
GAGAGTTTAAAAGTGCGCCA+AGG | 0.640119 | 8:-74488414 | None:intergenic |
GAAAGTTACGACAACAACGA+AGG | 0.651521 | 8:-74488440 | None:intergenic |
CTAGGGTTATTGAGGCTCGG+AGG | 0.692241 | 8:+74488923 | MsG0880046535.01.T01:CDS |
ATGAACATACGGGTTCCTAG+AGG | 0.704926 | 8:+74489231 | MsG0880046535.01.T01:CDS |
GTTGCCTGAATGGACAACAT+GGG | 0.705193 | 8:+74488747 | MsG0880046535.01.T01:CDS |
TTGAGACTAAGATTACAACG+AGG | 0.832729 | 8:-74488303 | MsG0880046536.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATCTTCTATAGTGTTT+TGG | + | Chr8:74489338-74489357 | MsG0880046535.01.T01:CDS | 20.0% |
! | AAAAACGTTATACAATCAAC+TGG | - | Chr8:74488604-74488623 | None:intergenic | 25.0% |
! | AAATACTTCAAGTAACAATC+TGG | - | Chr8:74489523-74489542 | None:intergenic | 25.0% |
!! | AGTTGATTGTATAACGTTTT+TGG | + | Chr8:74488603-74488622 | MsG0880046535.01.T01:CDS | 25.0% |
!! | ATTGTTACTTGAAGTATTTG+TGG | + | Chr8:74489524-74489543 | MsG0880046535.01.T01:CDS | 25.0% |
!! | TTCAAATTTGAACCATTTTG+CGG | - | Chr8:74489105-74489124 | None:intergenic | 25.0% |
!!! | TTTGTTGTATTAGCTTTTCT+TGG | + | Chr8:74488538-74488557 | MsG0880046535.01.T01:CDS | 25.0% |
AAATGAGAATTTGATGTTGG+AGG | + | Chr8:74489269-74489288 | MsG0880046535.01.T01:CDS | 30.0% | |
AATGAGAATTTGATGTTGGA+GGG | + | Chr8:74489270-74489289 | MsG0880046535.01.T01:CDS | 30.0% | |
GTCAAATGAGAATTTGATGT+TGG | + | Chr8:74489266-74489285 | MsG0880046535.01.T01:CDS | 30.0% | |
TAATGATTGTATGGATCCTA+GGG | + | Chr8:74488906-74488925 | MsG0880046535.01.T01:CDS | 30.0% | |
TACATCGGAAATAGAAAAGA+AGG | - | Chr8:74488483-74488502 | None:intergenic | 30.0% | |
TGTTATCTTGCAATTATTGC+TGG | + | Chr8:74489402-74489421 | MsG0880046535.01.T01:CDS | 30.0% | |
TTAGAACATCAAGAGATTCA+AGG | - | Chr8:74489559-74489578 | None:intergenic | 30.0% | |
TTCATACCATGATCAATCAA+GGG | - | Chr8:74489216-74489235 | None:intergenic | 30.0% | |
TTGAATTCTAGTAGCACTTA+TGG | + | Chr8:74489120-74489139 | MsG0880046535.01.T01:CDS | 30.0% | |
TTGATCATGGTATGAACATA+CGG | + | Chr8:74489220-74489239 | MsG0880046535.01.T01:CDS | 30.0% | |
! | TTGGAATATTGGTTGCTTAT+TGG | + | Chr8:74488716-74488735 | MsG0880046535.01.T01:CDS | 30.0% |
! | TTTGGTGGTTATTGGAATAT+TGG | + | Chr8:74488705-74488724 | MsG0880046535.01.T01:CDS | 30.0% |
!!! | ATCTTCTATAGTGTTTTGGT+TGG | + | Chr8:74489342-74489361 | MsG0880046535.01.T01:CDS | 30.0% |
!!! | GTTTTAAGAACGTGATACAT+CGG | - | Chr8:74488498-74488517 | None:intergenic | 30.0% |
!!! | TGCTGTTTTTATGTCGAAAA+TGG | + | Chr8:74488660-74488679 | MsG0880046535.01.T01:CDS | 30.0% |
!!! | TTGTGTAATTTTGCTGTTGT+TGG | + | Chr8:74488631-74488650 | MsG0880046535.01.T01:CDS | 30.0% |
AAGAAGGACTAAGAAGAAAG+TGG | - | Chr8:74488467-74488486 | None:intergenic | 35.0% | |
AATTTGATGTTGGAGGGAAT+TGG | + | Chr8:74489276-74489295 | MsG0880046535.01.T01:CDS | 35.0% | |
ACGAAGATGATGAAGTTCTT+CGG | - | Chr8:74488210-74488229 | MsG0880046536.01.T01:intron | 35.0% | |
ATTTGATGTTGGAGGGAATT+GGG | + | Chr8:74489277-74489296 | MsG0880046535.01.T01:CDS | 35.0% | |
CACGTTCTTAAAACTCTACA+TGG | + | Chr8:74488504-74488523 | MsG0880046535.01.T01:CDS | 35.0% | |
CATCAAATTCTCATTTGACG+TGG | - | Chr8:74489265-74489284 | None:intergenic | 35.0% | |
GTAATGATTGTATGGATCCT+AGG | + | Chr8:74488905-74488924 | MsG0880046535.01.T01:CDS | 35.0% | |
GTTCATACCATGATCAATCA+AGG | - | Chr8:74489217-74489236 | None:intergenic | 35.0% | |
TCCATACAATCATTACTCAC+CGG | - | Chr8:74488901-74488920 | None:intergenic | 35.0% | |
TGATCATGGTATGAACATAC+GGG | + | Chr8:74489221-74489240 | MsG0880046535.01.T01:CDS | 35.0% | |
TGCAAGATAACATGCATACA+CGG | - | Chr8:74489394-74489413 | None:intergenic | 35.0% | |
TTGAGACTAAGATTACAACG+AGG | - | Chr8:74488306-74488325 | MsG0880046536.01.T01:CDS | 35.0% | |
!!! | ATGGCTATTTTTGTTACGCA+AGG | + | Chr8:74488679-74488698 | MsG0880046535.01.T01:CDS | 35.0% |
!!! | GTTGTATTAGCTTTTCTTGG+AGG | + | Chr8:74488541-74488560 | MsG0880046535.01.T01:CDS | 35.0% |
!!! | TGGCTATTTTTGTTACGCAA+GGG | + | Chr8:74488680-74488699 | MsG0880046535.01.T01:CDS | 35.0% |
!!! | TTTTGTTACGCAAGGGTATT+TGG | + | Chr8:74488687-74488706 | MsG0880046535.01.T01:CDS | 35.0% |
AAACAACCTCAGATTCTTCC+TGG | + | Chr8:74488383-74488402 | MsG0880046535.01.T01:CDS | 40.0% | |
AACAACCTCAGATTCTTCCT+GGG | + | Chr8:74488384-74488403 | MsG0880046535.01.T01:CDS | 40.0% | |
AACAGTATTCGCGTCTGAAT+TGG | - | Chr8:74489052-74489071 | None:intergenic | 40.0% | |
ACAACCGTTCTCGATAGTTT+AGG | + | Chr8:74488235-74488254 | MsG0880046535.01.T01:CDS | 40.0% | |
AGATGAAGAAATTCCGGCTT+TGG | + | Chr8:74488861-74488880 | MsG0880046535.01.T01:CDS | 40.0% | |
AGGAACATGCAGATTGAAAC+GGG | - | Chr8:74488286-74488305 | MsG0880046536.01.T01:CDS | 40.0% | |
AGTTCAACCAAAAGCCTCAA+AGG | - | Chr8:74488829-74488848 | None:intergenic | 40.0% | |
CGAAGATGATGAAGTTCTTC+GGG | - | Chr8:74488209-74488228 | MsG0880046536.01.T01:intron | 40.0% | |
GAAAGTTACGACAACAACGA+AGG | - | Chr8:74488443-74488462 | None:intergenic | 40.0% | |
GAGAATTTGACTCCGCAAAA+TGG | + | Chr8:74489090-74489109 | MsG0880046535.01.T01:CDS | 40.0% | |
GAGAGTGGAAATTCAGTGTT+GGG | + | Chr8:74488991-74489010 | MsG0880046535.01.T01:CDS | 40.0% | |
GAGGAACATGCAGATTGAAA+CGG | - | Chr8:74488287-74488306 | MsG0880046536.01.T01:CDS | 40.0% | |
GGTTTACTATGTTGCCTGAA+TGG | + | Chr8:74488737-74488756 | MsG0880046535.01.T01:CDS | 40.0% | |
GTCGAGAGATGAAGAAATTC+CGG | + | Chr8:74488855-74488874 | MsG0880046535.01.T01:CDS | 40.0% | |
TATGGATCCTAGGGTTATTG+AGG | + | Chr8:74488915-74488934 | MsG0880046535.01.T01:CDS | 40.0% | |
TGAGAGTGGAAATTCAGTGT+TGG | + | Chr8:74488990-74489009 | MsG0880046535.01.T01:CDS | 40.0% | |
TGTTTCGTCGTATGCTATGT+TGG | - | Chr8:74488368-74488387 | None:intergenic | 40.0% | |
TTCGCCTAAACTATCGAGAA+CGG | - | Chr8:74488242-74488261 | MsG0880046536.01.T01:intron | 40.0% | |
! | AATTCCGGCTTTGGTTTATG+AGG | + | Chr8:74488870-74488889 | MsG0880046535.01.T01:CDS | 40.0% |
! | CTTGCAATTATTGCTGGTCT+CGG | + | Chr8:74489408-74489427 | MsG0880046535.01.T01:CDS | 40.0% |
!! | CAAGGGTATTTGGTGGTTAT+TGG | + | Chr8:74488697-74488716 | MsG0880046535.01.T01:CDS | 40.0% |
!!! | CTATAGTGTTTTGGTTGGCA+GGG | + | Chr8:74489347-74489366 | MsG0880046535.01.T01:CDS | 40.0% |
!!! | TCTATAGTGTTTTGGTTGGC+AGG | + | Chr8:74489346-74489365 | MsG0880046535.01.T01:CDS | 40.0% |
AATCTGGTAAGAGCCGAAGA+GGG | + | Chr8:74489150-74489169 | MsG0880046535.01.T01:CDS | 45.0% | |
ACCATGATCAATCAAGGGTG+TGG | - | Chr8:74489211-74489230 | None:intergenic | 45.0% | |
ATAGCCCATGTTGTCCATTC+AGG | - | Chr8:74488754-74488773 | None:intergenic | 45.0% | |
ATCCTAGGGTTATTGAGGCT+CGG | + | Chr8:74488920-74488939 | MsG0880046535.01.T01:CDS | 45.0% | |
ATGAACATACGGGTTCCTAG+AGG | + | Chr8:74489231-74489250 | MsG0880046535.01.T01:CDS | 45.0% | |
CACTTATGGCACACGTAATC+TGG | + | Chr8:74489134-74489153 | MsG0880046535.01.T01:CDS | 45.0% | |
CTAGCCTCATAAACCAAAGC+CGG | - | Chr8:74488877-74488896 | None:intergenic | 45.0% | |
GCCGGTGAGTAATGATTGTA+TGG | + | Chr8:74488897-74488916 | MsG0880046535.01.T01:CDS | 45.0% | |
GTTGCCTGAATGGACAACAT+GGG | + | Chr8:74488747-74488766 | MsG0880046535.01.T01:CDS | 45.0% | |
TAATCTGGTAAGAGCCGAAG+AGG | + | Chr8:74489149-74489168 | MsG0880046535.01.T01:CDS | 45.0% | |
TCTTCCTGGGACAAATTCCT+TGG | + | Chr8:74488397-74488416 | MsG0880046535.01.T01:CDS | 45.0% | |
TGTTGCCTGAATGGACAACA+TGG | + | Chr8:74488746-74488765 | MsG0880046535.01.T01:CDS | 45.0% | |
TTTGTCCCAGGAAGAATCTG+AGG | - | Chr8:74488392-74488411 | None:intergenic | 45.0% | |
! | AATTCAGTGTTGGGTAGTGG+TGG | + | Chr8:74489000-74489019 | MsG0880046535.01.T01:CDS | 45.0% |
! | ATGGGCTATGCTTGTTGCTA+TGG | + | Chr8:74488765-74488784 | MsG0880046535.01.T01:CDS | 45.0% |
! | CGGCGTAACTTTGATGCTTT+TGG | + | Chr8:74489428-74489447 | MsG0880046535.01.T01:CDS | 45.0% |
! | GAGAGTTTAAAAGTGCGCCA+AGG | - | Chr8:74488417-74488436 | None:intergenic | 45.0% |
! | GCAGTTCTGATAACTGAGAG+TGG | + | Chr8:74488976-74488995 | MsG0880046535.01.T01:CDS | 45.0% |
! | GGAAATTCAGTGTTGGGTAG+TGG | + | Chr8:74488997-74489016 | MsG0880046535.01.T01:CDS | 45.0% |
! | GGCTTTGTATGATCTTGCTG+CGG | + | Chr8:74488786-74488805 | MsG0880046535.01.T01:CDS | 45.0% |
! | GTATGCTATGTTGGCTATGG+TGG | - | Chr8:74488359-74488378 | None:intergenic | 45.0% |
! | GTCGTATGCTATGTTGGCTA+TGG | - | Chr8:74488362-74488381 | None:intergenic | 45.0% |
! | TTGGCTATGGTGGAGATTGT+TGG | - | Chr8:74488349-74488368 | MsG0880046536.01.T01:CDS | 45.0% |
! | TTTGGTTTATGAGGCTAGGC+CGG | + | Chr8:74488879-74488898 | MsG0880046535.01.T01:CDS | 45.0% |
!! | TGTTACGCAAGGGTATTTGG+TGG | + | Chr8:74488690-74488709 | MsG0880046535.01.T01:CDS | 45.0% |
AAAAGCCTCAAAGGCCCAAC+AGG | - | Chr8:74488820-74488839 | None:intergenic | 50.0% | |
ATCTGGTAAGAGCCGAAGAG+GGG | + | Chr8:74489151-74489170 | MsG0880046535.01.T01:CDS | 50.0% | |
CTACCTGTGTCAGTAGCACT+CGG | + | Chr8:74489477-74489496 | MsG0880046535.01.T01:CDS | 50.0% | |
GATGTTGGAGGGAATTGGGT+TGG | + | Chr8:74489281-74489300 | MsG0880046535.01.T01:CDS | 50.0% | |
GCCACACCCTTGATTGATCA+TGG | + | Chr8:74489207-74489226 | MsG0880046535.01.T01:CDS | 50.0% | |
GGAGGTTATGGAGAGAGAGA+AGG | + | Chr8:74488944-74488963 | MsG0880046535.01.T01:CDS | 50.0% | |
TCGTCCGGTGCAATCAAGTT+GGG | + | Chr8:74489306-74489325 | MsG0880046535.01.T01:CDS | 50.0% | |
TTCGTCCGGTGCAATCAAGT+TGG | + | Chr8:74489305-74489324 | MsG0880046535.01.T01:CDS | 50.0% | |
! | ATACCGAGTGCTACTGACAC+AGG | - | Chr8:74489483-74489502 | None:intergenic | 50.0% |
! | CGGCTTTGGTTTATGAGGCT+AGG | + | Chr8:74488875-74488894 | MsG0880046535.01.T01:CDS | 50.0% |
!!! | CTGCGGTTTTGTTGCCTGTT+GGG | + | Chr8:74488803-74488822 | MsG0880046535.01.T01:CDS | 50.0% |
!!! | TGTTGGGCCTTTGAGGCTTT+TGG | + | Chr8:74488819-74488838 | MsG0880046535.01.T01:CDS | 50.0% |
CAGCCCCAACTTGATTGCAC+CGG | - | Chr8:74489313-74489332 | None:intergenic | 55.0% | |
CTAGGGTTATTGAGGCTCGG+AGG | + | Chr8:74488923-74488942 | MsG0880046535.01.T01:CDS | 55.0% | |
CTCCGAGCCTCAATAACCCT+AGG | - | Chr8:74488925-74488944 | None:intergenic | 55.0% | |
GACGTGGCATCTTCTCCTCT+AGG | - | Chr8:74489249-74489268 | None:intergenic | 55.0% | |
GCTACTGACACAGGTAGAGC+AGG | - | Chr8:74489474-74489493 | None:intergenic | 55.0% | |
TGCGCCAAGGAATTTGTCCC+AGG | - | Chr8:74488404-74488423 | None:intergenic | 55.0% | |
TGTTGCCTGTTGGGCCTTTG+AGG | + | Chr8:74488812-74488831 | MsG0880046535.01.T01:CDS | 55.0% | |
TTGAGGCTCGGAGGAGGTTA+TGG | + | Chr8:74488932-74488951 | MsG0880046535.01.T01:CDS | 55.0% | |
! | CGTCCGGTGCAATCAAGTTG+GGG | + | Chr8:74489307-74489326 | MsG0880046535.01.T01:CDS | 55.0% |
!! | GGAATTGGGTTGGCTTCGTC+CGG | + | Chr8:74489291-74489310 | MsG0880046535.01.T01:CDS | 55.0% |
!! | GGTGCAATCAAGTTGGGGCT+GGG | + | Chr8:74489312-74489331 | MsG0880046535.01.T01:CDS | 55.0% |
!!! | GCTGCGGTTTTGTTGCCTGT+TGG | + | Chr8:74488802-74488821 | MsG0880046535.01.T01:CDS | 55.0% |
AACCCTCACTCGCCCCTCTT+CGG | - | Chr8:74489166-74489185 | None:intergenic | 60.0% | |
GGGTTATTGAGGCTCGGAGG+AGG | + | Chr8:74488926-74488945 | MsG0880046535.01.T01:CDS | 60.0% | |
!! | CGGTGCAATCAAGTTGGGGC+TGG | + | Chr8:74489311-74489330 | MsG0880046535.01.T01:CDS | 60.0% |
AGCCGAAGAGGGGCGAGTGA+GGG | + | Chr8:74489161-74489180 | MsG0880046535.01.T01:CDS | 65.0% | |
GAGCCGAAGAGGGGCGAGTG+AGG | + | Chr8:74489160-74489179 | MsG0880046535.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 74488196 | 74489578 | 74488196 | ID=MsG0880046535.01;Name=MsG0880046535.01 |
Chr8 | mRNA | 74488196 | 74489578 | 74488196 | ID=MsG0880046535.01.T01;Parent=MsG0880046535.01;Name=MsG0880046535.01.T01;_AED=0.17;_eAED=0.17;_QI=0|-1|0|1|-1|1|1|0|460 |
Chr8 | exon | 74488196 | 74489578 | 74488196 | ID=MsG0880046535.01.T01:exon:31047;Parent=MsG0880046535.01.T01 |
Chr8 | CDS | 74488196 | 74489578 | 74488196 | ID=MsG0880046535.01.T01:cds;Parent=MsG0880046535.01.T01 |
Chr8 | mRNA | 74488298 | 74489578 | 74488298 | ID=MsG0880046535.01.T02;Parent=MsG0880046535.01;Name=MsG0880046535.01.T02;_AED=0.19;_eAED=0.19;_QI=0|-1|0|1|-1|1|1|0|426 |
Chr8 | exon | 74488298 | 74489578 | 74488298 | ID=MsG0880046535.01.T02:exon:31048;Parent=MsG0880046535.01.T02 |
Chr8 | CDS | 74488298 | 74489578 | 74488298 | ID=MsG0880046535.01.T02:cds;Parent=MsG0880046535.01.T02 |
Chr8 | mRNA | 74489375 | 74489578 | 74489375 | ID=MsG0880046535.01.T03;Parent=MsG0880046535.01;Name=MsG0880046535.01.T03;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|0|1|0|67 |
Chr8 | exon | 74489375 | 74489578 | 74489375 | ID=MsG0880046535.01.T03:exon:31049;Parent=MsG0880046535.01.T03 |
Chr8 | CDS | 74489375 | 74489578 | 74489375 | ID=MsG0880046535.01.T03:cds;Parent=MsG0880046535.01.T03 |
Chr8 | mRNA | 74489387 | 74489578 | 74489387 | ID=MsG0880046535.01.T04;Parent=MsG0880046535.01;Name=MsG0880046535.01.T04;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|0|1|0|63 |
Chr8 | exon | 74489387 | 74489578 | 74489387 | ID=MsG0880046535.01.T04:exon:31050;Parent=MsG0880046535.01.T04 |
Chr8 | CDS | 74489387 | 74489578 | 74489387 | ID=MsG0880046535.01.T04:cds;Parent=MsG0880046535.01.T04 |
Chr8 | mRNA | 74489441 | 74489578 | 74489441 | ID=MsG0880046535.01.T05;Parent=MsG0880046535.01;Name=MsG0880046535.01.T05;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|0|1|0|45 |
Chr8 | exon | 74489441 | 74489578 | 74489441 | ID=MsG0880046535.01.T05:exon:31051;Parent=MsG0880046535.01.T05 |
Chr8 | CDS | 74489441 | 74489578 | 74489441 | ID=MsG0880046535.01.T05:cds;Parent=MsG0880046535.01.T05 |
Gene Sequence |
Protein sequence |