Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006243.01.T01 | XP_003592837.1 | 86.719 | 128 | 3 | 5 | 1 | 126 | 1 | 116 | 7.38E-66 | 205 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006243.01.T01 | G7IB02 | 86.719 | 128 | 3 | 5 | 1 | 126 | 1 | 116 | 3.52e-66 | 205 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048307.01 | MsG0180006243.01 | 0.828664 | 7.929438e-55 | 7.933283e-52 |
| MsG0080048464.01 | MsG0180006243.01 | 0.803885 | 2.815696e-49 | 1.431356e-46 |
| MsG0180000114.01 | MsG0180006243.01 | 0.843186 | 1.635724e-58 | 2.538761e-55 |
| MsG0180000400.01 | MsG0180006243.01 | -0.806478 | 8.067030e-50 | 4.383045e-47 |
| MsG0180000789.01 | MsG0180006243.01 | 0.853949 | 1.703613e-61 | 3.744200e-58 |
| MsG0180001100.01 | MsG0180006243.01 | 0.813855 | 2.072069e-51 | 1.368512e-48 |
| MsG0180001105.01 | MsG0180006243.01 | 0.801046 | 1.083012e-48 | 5.121519e-46 |
| MsG0180001311.01 | MsG0180006243.01 | 0.830831 | 2.353426e-55 | 2.508385e-52 |
| MsG0180001315.01 | MsG0180006243.01 | 0.811460 | 6.923995e-51 | 4.288559e-48 |
| MsG0180003357.01 | MsG0180006243.01 | 0.811185 | 7.945480e-51 | 4.885505e-48 |
| MsG0180003725.01 | MsG0180006243.01 | 0.822944 | 1.806025e-53 | 1.533553e-50 |
| MsG0180003807.01 | MsG0180006243.01 | 0.827764 | 1.306297e-54 | 1.273068e-51 |
| MsG0180003885.01 | MsG0180006243.01 | 0.827239 | 1.746011e-54 | 1.675928e-51 |
| MsG0180003932.01 | MsG0180006243.01 | 0.823323 | 1.473738e-53 | 1.264754e-50 |
| MsG0180004205.01 | MsG0180006243.01 | 0.809173 | 2.156297e-50 | 1.257138e-47 |
| MsG0180004486.01 | MsG0180006243.01 | 0.833708 | 4.567368e-56 | 5.302112e-53 |
| MsG0180004493.01 | MsG0180006243.01 | 0.835573 | 1.551269e-56 | 1.904558e-53 |
| MsG0180004500.01 | MsG0180006243.01 | 0.845487 | 3.938798e-59 | 6.574148e-56 |
| MsG0180005049.01 | MsG0180006243.01 | 0.810159 | 1.323880e-50 | 7.921802e-48 |
| MsG0180005397.01 | MsG0180006243.01 | 0.815180 | 1.055118e-51 | 7.222684e-49 |
| MsG0180005398.01 | MsG0180006243.01 | 0.802415 | 5.670558e-49 | 2.776263e-46 |
| MsG0180005445.01 | MsG0180006243.01 | 0.811003 | 8.699462e-51 | 5.324240e-48 |
| MsG0180005493.01 | MsG0180006243.01 | 0.818919 | 1.524454e-52 | 1.156485e-49 |
| MsG0180006104.01 | MsG0180006243.01 | 0.817888 | 2.611002e-52 | 1.925023e-49 |
| MsG0180006243.01 | MsG0280006481.01 | 0.833661 | 4.691425e-56 | 5.438834e-53 |
| MsG0180006243.01 | MsG0280007484.01 | 0.835693 | 1.446784e-56 | 1.782878e-53 |
| MsG0180006243.01 | MsG0280007496.01 | 0.804154 | 2.474811e-49 | 1.266765e-46 |
| MsG0180006243.01 | MsG0280007984.01 | 0.814278 | 1.671357e-51 | 1.116618e-48 |
| MsG0180006243.01 | MsG0280008112.01 | 0.809638 | 1.713891e-50 | 1.011713e-47 |
| MsG0180006243.01 | MsG0280008113.01 | 0.830274 | 3.220075e-55 | 3.376545e-52 |
| MsG0180006243.01 | MsG0280008738.01 | 0.903883 | 2.187078e-79 | 3.298875e-75 |
| MsG0180006243.01 | MsG0280009256.01 | 0.803219 | 3.869126e-49 | 1.933415e-46 |
| MsG0180006243.01 | MsG0280009417.01 | 0.802482 | 5.494472e-49 | 2.694424e-46 |
| MsG0180006243.01 | MsG0280010152.01 | 0.808039 | 3.766398e-50 | 2.130975e-47 |
| MsG0180006243.01 | MsG0280010158.01 | 0.817953 | 2.523560e-52 | 1.863862e-49 |
| MsG0180006243.01 | MsG0280010349.01 | 0.800410 | 1.460184e-48 | 6.794413e-46 |
| MsG0180006243.01 | MsG0280010350.01 | 0.801814 | 7.537701e-49 | 3.634216e-46 |
| MsG0180006243.01 | MsG0280010560.01 | 0.810782 | 9.714402e-51 | 5.909831e-48 |
| MsG0180006243.01 | MsG0280010598.01 | 0.803818 | 2.906697e-49 | 1.475061e-46 |
| MsG0180006243.01 | MsG0280010599.01 | 0.828981 | 6.645222e-55 | 6.709437e-52 |
| MsG0180006243.01 | MsG0280011027.01 | 0.853355 | 2.524072e-61 | 5.438707e-58 |
| MsG0180006243.01 | MsG0380011669.01 | 0.822754 | 1.999687e-53 | 1.688990e-50 |
| MsG0180006243.01 | MsG0380011671.01 | 0.800811 | 1.209525e-48 | 5.685243e-46 |
| MsG0180006243.01 | MsG0380012057.01 | 0.804106 | 2.533359e-49 | 1.295114e-46 |
| MsG0180006243.01 | MsG0380014866.01 | 0.809395 | 1.932757e-50 | 1.133495e-47 |
| MsG0180006243.01 | MsG0380015289.01 | 0.830143 | 3.467549e-55 | 3.622367e-52 |
| MsG0180006243.01 | MsG0380015300.01 | 0.813246 | 2.819967e-51 | 1.831853e-48 |
| MsG0180006243.01 | MsG0380016187.01 | 0.879923 | 8.377773e-70 | 4.628483e-66 |
| MsG0180006243.01 | MsG0380016391.01 | 0.800491 | 1.406022e-48 | 6.555552e-46 |
| MsG0180006243.01 | MsG0380016740.01 | 0.809157 | 2.173786e-50 | 1.266785e-47 |
| MsG0180006243.01 | MsG0380016923.01 | 0.804703 | 1.901541e-49 | 9.871781e-47 |
| MsG0180006243.01 | MsG0380017293.01 | 0.811966 | 5.375095e-51 | 3.374088e-48 |
| MsG0180006243.01 | MsG0380017401.01 | 0.853563 | 2.200104e-61 | 4.773702e-58 |
| MsG0180006243.01 | MsG0380017433.01 | 0.820715 | 5.923864e-53 | 4.723330e-50 |
| MsG0180006243.01 | MsG0480018402.01 | 0.806989 | 6.290689e-50 | 3.463129e-47 |
| MsG0180006243.01 | MsG0480018479.01 | 0.803897 | 2.800128e-49 | 1.423891e-46 |
| MsG0180006243.01 | MsG0480018985.01 | 0.809461 | 1.870876e-50 | 1.099101e-47 |
| MsG0180006243.01 | MsG0480019007.01 | 0.814385 | 1.582744e-51 | 1.060534e-48 |
| MsG0180006243.01 | MsG0480019167.01 | 0.828385 | 9.258066e-55 | 9.188412e-52 |
| MsG0180006243.01 | MsG0480019562.01 | 0.800908 | 1.155959e-48 | 5.447221e-46 |
| MsG0180006243.01 | MsG0480019711.01 | 0.832556 | 8.837390e-56 | 9.912670e-53 |
| MsG0180006243.01 | MsG0480021492.01 | 0.802076 | 6.660025e-49 | 3.232442e-46 |
| MsG0180006243.01 | MsG0480021550.01 | 0.800454 | 1.430426e-48 | 6.663023e-46 |
| MsG0180006243.01 | MsG0480021870.01 | 0.818177 | 2.245583e-52 | 1.668854e-49 |
| MsG0180006243.01 | MsG0480022514.01 | 0.901362 | 2.893744e-78 | 3.896001e-74 |
| MsG0180006243.01 | MsG0480022586.01 | 0.801683 | 8.019055e-49 | 3.853274e-46 |
| MsG0180006243.01 | MsG0480022624.01 | 0.820173 | 7.886819e-53 | 6.195211e-50 |
| MsG0180006243.01 | MsG0480022643.01 | 0.831888 | 1.293214e-55 | 1.422423e-52 |
| MsG0180006243.01 | MsG0480022672.01 | 0.816200 | 6.251501e-52 | 4.401126e-49 |
| MsG0180006243.01 | MsG0480022891.01 | 0.800482 | 1.411850e-48 | 6.581132e-46 |
| MsG0180006243.01 | MsG0480023025.01 | 0.836193 | 1.080405e-56 | 1.351757e-53 |
| MsG0180006243.01 | MsG0480023172.01 | 0.835623 | 1.506396e-56 | 1.852228e-53 |
| MsG0180006243.01 | MsG0480023381.01 | 0.849127 | 3.946010e-60 | 7.407096e-57 |
| MsG0180006243.01 | MsG0480023384.01 | 0.818738 | 1.676142e-52 | 1.265055e-49 |
| MsG0180006243.01 | MsG0480023578.01 | 0.803374 | 3.594782e-49 | 1.803398e-46 |
| MsG0180006243.01 | MsG0480023670.01 | 0.840626 | 7.764876e-58 | 1.112478e-54 |
| MsG0180006243.01 | MsG0480023978.01 | 0.810094 | 1.367359e-50 | 8.168152e-48 |
| MsG0180006243.01 | MsG0580024725.01 | 0.812405 | 4.310158e-51 | 2.738228e-48 |
| MsG0180006243.01 | MsG0580024727.01 | 0.810296 | 1.237197e-50 | 7.429355e-48 |
| MsG0180006243.01 | MsG0580024829.01 | 0.819956 | 8.843928e-53 | 6.905004e-50 |
| MsG0180006243.01 | MsG0580025025.01 | 0.808295 | 3.321892e-50 | 1.892310e-47 |
| MsG0180006243.01 | MsG0580025439.01 | 0.807055 | 6.093876e-50 | 3.360541e-47 |
| MsG0180006243.01 | MsG0580025661.01 | 0.847664 | 1.002469e-59 | 1.794792e-56 |
| MsG0180006243.01 | MsG0580025903.01 | 0.805029 | 1.626262e-49 | 8.513463e-47 |
| MsG0180006243.01 | MsG0580026460.01 | 0.819286 | 1.258119e-52 | 9.640107e-50 |
| MsG0180006243.01 | MsG0580027320.01 | 0.815947 | 7.120727e-52 | 4.978082e-49 |
| MsG0180006243.01 | MsG0580028033.01 | 0.803144 | 4.009843e-49 | 1.999844e-46 |
| MsG0180006243.01 | MsG0580029236.01 | 0.805420 | 1.346531e-49 | 7.120509e-47 |
| MsG0180006243.01 | MsG0580029879.01 | 0.811764 | 5.946539e-51 | 3.712736e-48 |
| MsG0180006243.01 | MsG0580029919.01 | 0.832864 | 7.411791e-56 | 8.390222e-53 |
| MsG0180006243.01 | MsG0680030515.01 | 0.844052 | 9.600287e-59 | 1.531440e-55 |
| MsG0180006243.01 | MsG0680031145.01 | 0.827035 | 1.954050e-54 | 1.864270e-51 |
| MsG0180006243.01 | MsG0680033465.01 | 0.815438 | 9.245820e-52 | 6.374565e-49 |
| MsG0180006243.01 | MsG0680034235.01 | 0.861394 | 1.057946e-63 | 2.989379e-60 |
| MsG0180006243.01 | MsG0680034445.01 | 0.824887 | 6.326284e-54 | 5.677068e-51 |
| MsG0180006243.01 | MsG0680034767.01 | 0.832436 | 9.466119e-56 | 1.057960e-52 |
| MsG0180006243.01 | MsG0680035307.01 | 0.800458 | 1.427768e-48 | 6.651305e-46 |
| MsG0180006243.01 | MsG0780035937.01 | 0.809867 | 1.530012e-50 | 9.085875e-48 |
| MsG0180006243.01 | MsG0780036219.01 | 0.809109 | 2.225715e-50 | 1.295401e-47 |
| MsG0180006243.01 | MsG0780036430.01 | 0.824184 | 9.259640e-54 | 8.142720e-51 |
| MsG0180006243.01 | MsG0780036517.01 | 0.806288 | 8.847176e-50 | 4.783721e-47 |
| MsG0180006243.01 | MsG0780036664.01 | 0.815348 | 9.680983e-52 | 6.658039e-49 |
| MsG0180006243.01 | MsG0780037141.01 | 0.807068 | 6.055042e-50 | 3.340223e-47 |
| MsG0180006243.01 | MsG0780037330.01 | 0.817565 | 3.087461e-52 | 2.256238e-49 |
| MsG0180006243.01 | MsG0780037701.01 | 0.817349 | 3.454171e-52 | 2.509308e-49 |
| MsG0180006243.01 | MsG0780039155.01 | 0.837379 | 5.382176e-57 | 6.977924e-54 |
| MsG0180006243.01 | MsG0780039369.01 | 0.815235 | 1.025846e-51 | 7.032924e-49 |
| MsG0180006243.01 | MsG0780039439.01 | 0.831089 | 2.033677e-55 | 2.184174e-52 |
| MsG0180006243.01 | MsG0780039443.01 | 0.816795 | 4.600499e-52 | 3.291738e-49 |
| MsG0180006243.01 | MsG0780039579.01 | 0.819943 | 8.905455e-53 | 6.950336e-50 |
| MsG0180006243.01 | MsG0780040176.01 | 0.814118 | 1.812964e-51 | 1.205949e-48 |
| MsG0180006243.01 | MsG0780040254.01 | 0.807827 | 4.178291e-50 | 2.350902e-47 |
| MsG0180006243.01 | MsG0780041091.01 | 0.843224 | 1.598027e-58 | 2.483235e-55 |
| MsG0180006243.01 | MsG0780041187.01 | 0.845167 | 4.806886e-59 | 7.940683e-56 |
| MsG0180006243.01 | MsG0780041387.01 | 0.815860 | 7.445836e-52 | 5.192997e-49 |
| MsG0180006243.01 | MsG0780041432.01 | 0.828725 | 7.663957e-55 | 7.680785e-52 |
| MsG0180006243.01 | MsG0780041440.01 | 0.815033 | 1.137281e-51 | 7.754683e-49 |
| MsG0180006243.01 | MsG0780041482.01 | 0.870283 | 1.639765e-66 | 6.343688e-63 |
| MsG0180006243.01 | MsG0780041734.01 | -0.823604 | 1.266474e-53 | 1.095619e-50 |
| MsG0180006243.01 | MsG0880042324.01 | 0.802373 | 5.784639e-49 | 2.829084e-46 |
| MsG0180006243.01 | MsG0880042857.01 | 0.830331 | 3.119026e-55 | 3.275998e-52 |
| MsG0180006243.01 | MsG0880043128.01 | 0.833836 | 4.242727e-56 | 4.945149e-53 |
| MsG0180006243.01 | MsG0880043804.01 | 0.811869 | 5.642987e-51 | 3.532977e-48 |
| MsG0180006243.01 | MsG0880043965.01 | 0.805579 | 1.247141e-49 | 6.621905e-47 |
| MsG0180006243.01 | MsG0880044131.01 | 0.835703 | 1.437677e-56 | 1.772220e-53 |
| MsG0180006243.01 | MsG0880044133.01 | 0.801727 | 7.856112e-49 | 3.779169e-46 |
| MsG0180006243.01 | MsG0880044145.01 | 0.808188 | 3.500652e-50 | 1.988575e-47 |
| MsG0180006243.01 | MsG0880045716.01 | 0.800780 | 1.227200e-48 | 5.763780e-46 |
| MsG0180006243.01 | MsG0880046517.01 | 0.834515 | 2.866831e-56 | 3.410213e-53 |
| MsG0180006243.01 | MsG0880046560.01 | 0.800688 | 1.281376e-48 | 6.004323e-46 |
| MsG0180006243.01 | MsG0880046561.01 | 0.829898 | 3.978704e-55 | 4.127322e-52 |
| MsG0180006243.01 | MsG0880046901.01 | 0.834722 | 2.543362e-56 | 3.043529e-53 |
| MsG0180006243.01 | MsG0880047046.01 | 0.808276 | 3.352769e-50 | 1.909007e-47 |
| MsG0180006243.01 | MsG0880047267.01 | 0.803862 | 2.846399e-49 | 1.446102e-46 |
| MsG0180006243.01 | MsG0880047519.01 | 0.880319 | 6.054722e-70 | 3.394889e-66 |
| MsG0180006243.01 | MsG0880047594.01 | 0.805613 | 1.226751e-49 | 6.519371e-47 |
| MsG0180006243.01 | MsG0880047696.01 | 0.845509 | 3.885253e-59 | 6.489510e-56 |
| MsG0180006243.01 | MsG0880047703.01 | 0.818257 | 2.154274e-52 | 1.604428e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006243.01.T01 | MTR_1g116590 | 86.719 | 128 | 3 | 5 | 1 | 126 | 1 | 116 | 8.93e-70 | 205 |
| MsG0180006243.01.T01 | MTR_1g080750 | 43.519 | 108 | 36 | 2 | 40 | 122 | 65 | 172 | 1.62e-22 | 87.4 |
| MsG0180006243.01.T01 | MTR_7g115290 | 40.385 | 104 | 34 | 2 | 47 | 122 | 79 | 182 | 8.32e-20 | 80.5 |
| MsG0180006243.01.T01 | MTR_5g017450 | 39.655 | 116 | 35 | 5 | 41 | 123 | 57 | 170 | 4.78e-15 | 67.8 |
| MsG0180006243.01.T01 | MTR_7g110880 | 50.704 | 71 | 31 | 2 | 49 | 119 | 214 | 280 | 1.26e-14 | 68.6 |
| MsG0180006243.01.T01 | MTR_4g085970 | 38.000 | 100 | 44 | 3 | 42 | 123 | 50 | 149 | 3.91e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006243.01.T01 | AT2G31560 | 61.594 | 138 | 30 | 1 | 12 | 126 | 65 | 202 | 3.02e-53 | 166 |
| MsG0180006243.01.T01 | AT2G31560 | 61.594 | 138 | 30 | 1 | 12 | 126 | 65 | 202 | 3.02e-53 | 166 |
| MsG0180006243.01.T01 | AT2G31560 | 61.594 | 138 | 30 | 1 | 12 | 126 | 65 | 202 | 3.02e-53 | 166 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT1G05870 | 60.403 | 149 | 26 | 4 | 10 | 126 | 42 | 189 | 2.06e-52 | 164 |
| MsG0180006243.01.T01 | AT2G43340 | 57.718 | 149 | 35 | 3 | 3 | 126 | 44 | 189 | 2.68e-47 | 150 |
| MsG0180006243.01.T01 | AT3G22690 | 61.728 | 81 | 23 | 1 | 45 | 117 | 843 | 923 | 1.86e-24 | 97.4 |
| MsG0180006243.01.T01 | AT3G04700 | 39.316 | 117 | 37 | 2 | 37 | 122 | 74 | 187 | 3.63e-19 | 79.0 |
| MsG0180006243.01.T01 | AT5G28690 | 37.903 | 124 | 44 | 3 | 29 | 122 | 68 | 188 | 8.51e-19 | 78.2 |
| MsG0180006243.01.T01 | AT5G28690 | 37.903 | 124 | 44 | 3 | 29 | 122 | 68 | 188 | 8.51e-19 | 78.2 |
| MsG0180006243.01.T01 | AT5G28690 | 37.903 | 124 | 44 | 3 | 29 | 122 | 68 | 188 | 8.51e-19 | 78.2 |
| MsG0180006243.01.T01 | AT1G08790 | 40.741 | 108 | 34 | 3 | 45 | 122 | 78 | 185 | 1.10e-18 | 77.8 |
| MsG0180006243.01.T01 | AT3G50350 | 42.056 | 107 | 43 | 2 | 35 | 122 | 59 | 165 | 1.71e-18 | 77.0 |
| MsG0180006243.01.T01 | AT3G04710 | 38.462 | 117 | 38 | 2 | 37 | 122 | 74 | 187 | 2.60e-18 | 80.1 |
| MsG0180006243.01.T01 | AT4G33985 | 45.370 | 108 | 39 | 2 | 39 | 126 | 43 | 150 | 3.17e-18 | 75.9 |
| MsG0180006243.01.T01 | AT2G15590 | 38.318 | 107 | 47 | 3 | 39 | 126 | 40 | 146 | 7.75e-13 | 61.6 |
| MsG0180006243.01.T01 | AT3G50350 | 51.613 | 62 | 28 | 1 | 35 | 94 | 63 | 124 | 1.61e-12 | 61.6 |
| MsG0180006243.01.T01 | AT3G62070 | 46.667 | 75 | 30 | 3 | 50 | 119 | 150 | 219 | 3.06e-12 | 61.6 |
| MsG0180006243.01.T01 | AT2G46940 | 47.143 | 70 | 29 | 3 | 50 | 119 | 185 | 246 | 1.28e-11 | 60.1 |
| MsG0180006243.01.T01 | AT4G01670 | 49.296 | 71 | 30 | 2 | 49 | 119 | 172 | 236 | 8.55e-11 | 57.8 |
Find 32 sgRNAs with CRISPR-Local
Find 32 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGTTTGGATCTTGGTTT+TGG | 0.184629 | 1:-101791981 | MsG0180006243.01.T01:CDS |
| TTAAAGCAAGATTGAAATAT+TGG | 0.250359 | 1:-101791824 | MsG0180006243.01.T01:CDS |
| AATCTTGCTTTAACATCTTC+AGG | 0.331635 | 1:+101791834 | None:intergenic |
| TTCCAATTGGCAAATGAATC+AGG | 0.369053 | 1:+101791879 | None:intergenic |
| CTCCTGATTCATTTGCCAAT+TGG | 0.369305 | 1:-101791881 | MsG0180006243.01.T01:CDS |
| TGATGAGTTGAAGGGATGTT+TGG | 0.374718 | 1:-101791994 | MsG0180006243.01.T01:CDS |
| TAAAGCAAGATTGAAATATT+GGG | 0.375422 | 1:-101791823 | MsG0180006243.01.T01:CDS |
| TTGAAGGGATGTTTGGATCT+TGG | 0.389102 | 1:-101791987 | MsG0180006243.01.T01:CDS |
| TAGTTAGCTGCAGAGTTTAA+CGG | 0.390779 | 1:+101791782 | None:intergenic |
| GGGAGGGTGTTACATAGTTC+AGG | 0.412792 | 1:+101791939 | None:intergenic |
| ATGGAAGGTGGAGGTGTTGT+TGG | 0.413737 | 1:-101792143 | MsG0180006243.01.T01:CDS |
| CATCAAGATCCTCATCTGTT+AGG | 0.424926 | 1:+101792012 | None:intergenic |
| TGGACTTGAGATCTTCCAAT+TGG | 0.470698 | 1:+101791866 | None:intergenic |
| GGAGGTGTTGTTGGAAGAAG+TGG | 0.473169 | 1:-101792134 | MsG0180006243.01.T01:CDS |
| TGAGGATCTTGATGAGTTGA+AGG | 0.481670 | 1:-101792003 | MsG0180006243.01.T01:CDS |
| TAACAAAGGAGTAGTGTTGT+TGG | 0.483852 | 1:-101792081 | MsG0180006243.01.T01:CDS |
| GAATAACACAACTCTAGAGC+TGG | 0.494397 | 1:+101791918 | None:intergenic |
| ATAATGAGGAGGATCTTTGT+AGG | 0.495986 | 1:-101792043 | MsG0180006243.01.T01:CDS |
| AAGGAGTAGTGTTGTTGGAA+GGG | 0.511274 | 1:-101792076 | MsG0180006243.01.T01:CDS |
| AAAGGAGTAGTGTTGTTGGA+AGG | 0.535317 | 1:-101792077 | MsG0180006243.01.T01:CDS |
| ACATCTTCAGGATGATCACC+TGG | 0.572260 | 1:+101791846 | None:intergenic |
| AGGGTATGTTGATGATAATG+AGG | 0.584846 | 1:-101792057 | MsG0180006243.01.T01:CDS |
| AATAACACAACTCTAGAGCT+GGG | 0.590951 | 1:+101791919 | None:intergenic |
| AATTGGAAGATCTCAAGTCC+AGG | 0.596552 | 1:-101791864 | MsG0180006243.01.T01:CDS |
| GTTGTTGGAAGAAGTGGAAG+TGG | 0.596897 | 1:-101792128 | MsG0180006243.01.T01:CDS |
| ACACAACTCTAGAGCTGGGA+GGG | 0.600482 | 1:+101791923 | None:intergenic |
| GACGAAAAGCCTAACAGATG+AGG | 0.616832 | 1:-101792021 | MsG0180006243.01.T01:CDS |
| TTGTTGGAAGAAGTGGAAGT+GGG | 0.619030 | 1:-101792127 | MsG0180006243.01.T01:CDS |
| AGTAAGAATAACAATAACAA+AGG | 0.625105 | 1:-101792095 | MsG0180006243.01.T01:CDS |
| GAGGATCTTGATGAGTTGAA+GGG | 0.630888 | 1:-101792002 | MsG0180006243.01.T01:CDS |
| GTATGTTGATGATAATGAGG+AGG | 0.675262 | 1:-101792054 | MsG0180006243.01.T01:CDS |
| AACACAACTCTAGAGCTGGG+AGG | 0.715725 | 1:+101791922 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAAGAATAACAATAACAA+AGG | - | Chr1:101791833-101791852 | MsG0180006243.01.T01:CDS | 20.0% |
| !! | TAAAGCAAGATTGAAATATT+GGG | - | Chr1:101792105-101792124 | MsG0180006243.01.T01:CDS | 20.0% |
| !! | TTAAAGCAAGATTGAAATAT+TGG | - | Chr1:101792104-101792123 | MsG0180006243.01.T01:CDS | 20.0% |
| AATCTTGCTTTAACATCTTC+AGG | + | Chr1:101792097-101792116 | None:intergenic | 30.0% | |
| ATAATGAGGAGGATCTTTGT+AGG | - | Chr1:101791885-101791904 | MsG0180006243.01.T01:CDS | 35.0% | |
| TAACAAAGGAGTAGTGTTGT+TGG | - | Chr1:101791847-101791866 | MsG0180006243.01.T01:CDS | 35.0% | |
| TTCCAATTGGCAAATGAATC+AGG | + | Chr1:101792052-101792071 | None:intergenic | 35.0% | |
| !! | AATAACACAACTCTAGAGCT+GGG | + | Chr1:101792012-101792031 | None:intergenic | 35.0% |
| !! | AGGGTATGTTGATGATAATG+AGG | - | Chr1:101791871-101791890 | MsG0180006243.01.T01:CDS | 35.0% |
| !! | GATGTTTGGATCTTGGTTTT+GGG | - | Chr1:101791948-101791967 | MsG0180006243.01.T01:CDS | 35.0% |
| !! | GTATGTTGATGATAATGAGG+AGG | - | Chr1:101791874-101791893 | MsG0180006243.01.T01:CDS | 35.0% |
| AATTGGAAGATCTCAAGTCC+AGG | - | Chr1:101792064-101792083 | MsG0180006243.01.T01:CDS | 40.0% | |
| CATCAAGATCCTCATCTGTT+AGG | + | Chr1:101791919-101791938 | None:intergenic | 40.0% | |
| CTCCTGATTCATTTGCCAAT+TGG | - | Chr1:101792047-101792066 | MsG0180006243.01.T01:CDS | 40.0% | |
| TGGACTTGAGATCTTCCAAT+TGG | + | Chr1:101792065-101792084 | None:intergenic | 40.0% | |
| TTGAAGGGATGTTTGGATCT+TGG | - | Chr1:101791941-101791960 | MsG0180006243.01.T01:CDS | 40.0% | |
| TTGTTGGAAGAAGTGGAAGT+GGG | - | Chr1:101791801-101791820 | MsG0180006243.01.T01:CDS | 40.0% | |
| ! | AAAGGAGTAGTGTTGTTGGA+AGG | - | Chr1:101791851-101791870 | MsG0180006243.01.T01:CDS | 40.0% |
| ! | AAGGAGTAGTGTTGTTGGAA+GGG | - | Chr1:101791852-101791871 | MsG0180006243.01.T01:CDS | 40.0% |
| ! | GAGGATCTTGATGAGTTGAA+GGG | - | Chr1:101791926-101791945 | MsG0180006243.01.T01:CDS | 40.0% |
| ! | GGATGTTTGGATCTTGGTTT+TGG | - | Chr1:101791947-101791966 | MsG0180006243.01.T01:CDS | 40.0% |
| ! | TGAGGATCTTGATGAGTTGA+AGG | - | Chr1:101791925-101791944 | MsG0180006243.01.T01:CDS | 40.0% |
| ! | TGATGAGTTGAAGGGATGTT+TGG | - | Chr1:101791934-101791953 | MsG0180006243.01.T01:CDS | 40.0% |
| !! | GAATAACACAACTCTAGAGC+TGG | + | Chr1:101792013-101792032 | None:intergenic | 40.0% |
| ACATCTTCAGGATGATCACC+TGG | + | Chr1:101792085-101792104 | None:intergenic | 45.0% | |
| GACGAAAAGCCTAACAGATG+AGG | - | Chr1:101791907-101791926 | MsG0180006243.01.T01:CDS | 45.0% | |
| GTTGTTGGAAGAAGTGGAAG+TGG | - | Chr1:101791800-101791819 | MsG0180006243.01.T01:CDS | 45.0% | |
| !! | AACACAACTCTAGAGCTGGG+AGG | + | Chr1:101792009-101792028 | None:intergenic | 50.0% |
| !! | ACACAACTCTAGAGCTGGGA+GGG | + | Chr1:101792008-101792027 | None:intergenic | 50.0% |
| !! | ATGGAAGGTGGAGGTGTTGT+TGG | - | Chr1:101791785-101791804 | MsG0180006243.01.T01:CDS | 50.0% |
| !! | GGAGGTGTTGTTGGAAGAAG+TGG | - | Chr1:101791794-101791813 | MsG0180006243.01.T01:CDS | 50.0% |
| !! | GGGAGGGTGTTACATAGTTC+AGG | + | Chr1:101791992-101792011 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 101791785 | 101792165 | 101791785 | ID=MsG0180006243.01;Name=MsG0180006243.01 |
| Chr1 | mRNA | 101791785 | 101792165 | 101791785 | ID=MsG0180006243.01.T01;Parent=MsG0180006243.01;Name=MsG0180006243.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|126 |
| Chr1 | exon | 101791785 | 101792165 | 101791785 | ID=MsG0180006243.01.T01:exon:51919;Parent=MsG0180006243.01.T01 |
| Chr1 | CDS | 101791785 | 101792165 | 101791785 | ID=MsG0180006243.01.T01:cds;Parent=MsG0180006243.01.T01 |
| Gene Sequence |
| Protein sequence |
