AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029540.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029540.01.T01 MTR_5g088220 96.800 500 13 3 1 500 1 497 0.0 962
MsG0580029540.01.T01 MTR_7g088140 52.357 403 145 9 121 494 82 466 1.25e-109 334
MsG0580029540.01.T01 MTR_7g088140 54.324 370 129 6 121 462 82 439 3.05e-109 333
MsG0580029540.01.T01 MTR_8g463890 46.341 246 119 5 99 342 12 246 5.63e-60 204
MsG0580029540.01.T01 MTR_4g088010 43.049 223 118 1 120 342 30 243 1.63e-58 197
MsG0580029540.01.T01 MTR_3g116130 40.625 96 52 1 162 257 25 115 2.33e-18 85.9
MsG0580029540.01.T01 MTR_1g073690 24.265 272 184 5 161 415 1 267 2.79e-18 87.8
MsG0580029540.01.T01 MTR_3g116130 40.625 96 52 1 162 257 25 115 1.03e-17 85.1
MsG0580029540.01.T01 MTR_2g026180 25.000 192 120 4 161 338 1 182 1.34e-16 82.8
MsG0580029540.01.T01 MTR_5g097580 25.532 282 158 10 167 420 7 264 2.88e-16 81.6
MsG0580029540.01.T01 MTR_5g097580 25.532 282 158 10 167 420 7 264 3.08e-16 81.6
MsG0580029540.01.T01 MTR_6g004810 26.163 172 118 3 167 337 46 209 5.07e-16 80.1
MsG0580029540.01.T01 MTR_5g064120 40.741 81 48 0 162 242 12 92 1.17e-15 77.8
MsG0580029540.01.T01 MTR_8g024520 40.964 83 49 0 162 244 21 103 3.08e-15 76.6
MsG0580029540.01.T01 MTR_8g024520 40.964 83 49 0 162 244 21 103 3.16e-15 76.6
MsG0580029540.01.T01 MTR_3g055990 24.590 183 120 3 167 338 7 182 6.56e-15 77.4
MsG0580029540.01.T01 MTR_3g055990 24.590 183 120 3 167 338 7 182 7.31e-15 77.4
MsG0580029540.01.T01 MTR_7g117495 38.554 83 51 0 162 244 14 96 2.38e-14 73.6
MsG0580029540.01.T01 MTR_7g117495 38.554 83 51 0 162 244 14 96 2.72e-14 73.2
MsG0580029540.01.T01 MTR_3g092490 37.931 87 54 0 162 248 22 108 3.03e-14 71.2
MsG0580029540.01.T01 MTR_3g092490 37.931 87 54 0 162 248 22 108 3.06e-14 73.2
MsG0580029540.01.T01 MTR_4g035310 38.554 83 51 0 162 244 12 94 3.11e-14 73.6
MsG0580029540.01.T01 MTR_3g092490 37.931 87 54 0 162 248 22 108 3.13e-14 72.8
MsG0580029540.01.T01 MTR_4g035310 38.554 83 51 0 162 244 12 94 3.78e-14 73.2
MsG0580029540.01.T01 MTR_5g017280 24.224 161 114 3 166 326 4 156 6.82e-14 73.9
MsG0580029540.01.T01 MTR_5g017280 24.224 161 114 3 166 326 4 156 9.99e-14 73.2
MsG0580029540.01.T01 MTR_3g082650 24.375 160 113 2 167 326 19 170 2.64e-13 71.6
MsG0580029540.01.T01 MTR_8g092550 28.230 209 124 5 147 339 183 381 5.17e-13 71.6
MsG0580029540.01.T01 MTR_3g095230 27.619 210 125 5 147 339 196 395 1.21e-11 67.4
MsG0580029540.01.T01 MTR_3g095230 27.619 210 125 5 147 339 196 395 1.55e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029540.01.T01 AT2G41060 47.674 516 187 15 1 499 1 450 1.50e-130 387
MsG0580029540.01.T01 AT2G41060 47.674 516 187 15 1 499 1 450 1.50e-130 387
MsG0580029540.01.T01 AT2G41060 47.674 516 187 15 1 499 1 450 1.50e-130 387
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G56860 55.932 413 131 12 114 500 91 478 6.45e-129 384
MsG0580029540.01.T01 AT3G15010 44.889 225 120 1 119 343 28 248 8.17e-61 205
MsG0580029540.01.T01 AT3G15010 44.889 225 120 1 119 343 28 248 8.17e-61 205
MsG0580029540.01.T01 AT2G22090 49.606 127 64 0 119 245 57 183 3.48e-35 134
MsG0580029540.01.T01 AT2G22090 40.000 90 54 0 258 347 100 189 8.06e-13 70.1
MsG0580029540.01.T01 AT2G22090 49.606 127 64 0 119 245 57 183 5.11e-35 134
MsG0580029540.01.T01 AT2G22090 40.000 90 54 0 258 347 100 189 8.22e-13 70.1
MsG0580029540.01.T01 AT2G22100 44.681 141 71 1 113 253 110 243 2.30e-33 130
MsG0580029540.01.T01 AT2G19380 45.802 131 71 0 115 245 357 487 1.11e-31 129
MsG0580029540.01.T01 AT1G76460 42.424 99 50 2 162 254 20 117 1.14e-17 84.0
MsG0580029540.01.T01 AT1G20880 43.373 83 47 0 162 244 20 102 1.40e-17 83.2
MsG0580029540.01.T01 AT1G20880 43.373 83 47 0 162 244 20 102 1.40e-17 83.2
MsG0580029540.01.T01 AT1G20880 43.373 83 47 0 162 244 20 102 1.40e-17 83.2
MsG0580029540.01.T01 AT5G40490 26.163 172 118 2 167 337 43 206 4.80e-17 83.6
MsG0580029540.01.T01 AT1G22330 40.000 90 53 1 162 250 13 102 5.10e-16 79.0
MsG0580029540.01.T01 AT1G22330 32.075 106 66 1 255 354 10 115 2.48e-11 65.1
MsG0580029540.01.T01 AT3G07810 25.397 189 113 4 167 338 7 184 5.16e-16 80.9
MsG0580029540.01.T01 AT3G07810 25.397 189 113 4 167 338 7 184 6.48e-16 80.5
MsG0580029540.01.T01 AT1G17640 27.564 156 108 3 167 322 67 217 8.40e-16 79.3
MsG0580029540.01.T01 AT1G17640 27.564 156 108 3 167 322 67 217 8.40e-16 79.3
MsG0580029540.01.T01 AT1G17640 27.564 156 108 3 167 322 67 217 8.40e-16 79.3
MsG0580029540.01.T01 AT4G26650 25.543 184 124 3 167 338 16 198 1.67e-15 79.3
MsG0580029540.01.T01 AT2G46780 38.947 95 58 0 160 254 16 110 1.72e-15 78.2
MsG0580029540.01.T01 AT2G46780 38.947 95 58 0 160 254 16 110 1.72e-15 78.2
MsG0580029540.01.T01 AT4G26650 25.543 184 124 3 167 338 13 195 1.76e-15 79.0
MsG0580029540.01.T01 AT1G78260 39.506 81 49 0 162 242 13 93 2.20e-15 77.0
MsG0580029540.01.T01 AT5G55550 24.865 185 121 4 167 338 7 186 2.50e-15 78.6
MsG0580029540.01.T01 AT5G55550 24.865 185 121 4 167 338 7 186 2.50e-15 78.6
MsG0580029540.01.T01 AT5G55550 24.865 185 121 4 167 338 7 186 2.50e-15 78.6
MsG0580029540.01.T01 AT5G55550 24.865 185 121 4 167 338 7 186 2.50e-15 78.6
MsG0580029540.01.T01 AT5G55550 24.865 185 121 4 167 338 7 186 2.50e-15 78.6
MsG0580029540.01.T01 AT5G55550 24.865 185 121 4 167 338 7 186 3.55e-15 78.2
MsG0580029540.01.T01 AT5G55550 24.865 185 121 4 167 338 7 186 3.55e-15 78.2
MsG0580029540.01.T01 AT5G55550 24.865 185 121 4 167 338 7 186 3.55e-15 78.2
MsG0580029540.01.T01 AT5G55550 24.865 185 121 4 167 338 7 186 3.55e-15 78.2
MsG0580029540.01.T01 AT1G78260 39.506 81 49 0 162 242 13 93 8.61e-15 75.1
MsG0580029540.01.T01 AT5G47620 23.280 189 115 3 167 338 7 182 8.64e-15 77.0
MsG0580029540.01.T01 AT5G47620 23.280 189 115 3 167 338 7 182 8.64e-15 77.0
MsG0580029540.01.T01 AT5G47620 23.280 189 115 3 167 338 7 182 8.64e-15 77.0
MsG0580029540.01.T01 AT4G36960 24.157 178 116 4 166 338 3 166 9.03e-15 76.3
MsG0580029540.01.T01 AT4G36960 24.157 178 116 4 166 338 3 166 9.03e-15 76.3
MsG0580029540.01.T01 AT3G06970 43.590 78 44 0 167 244 13 90 1.10e-14 75.5
MsG0580029540.01.T01 AT1G22910 40.964 83 49 0 162 244 9 91 2.37e-14 73.2
MsG0580029540.01.T01 AT1G22910 40.964 83 49 0 162 244 9 91 2.67e-14 73.2
MsG0580029540.01.T01 AT5G53680 36.364 99 59 1 160 254 7 105 2.70e-13 68.6
MsG0580029540.01.T01 AT1G22910 40.964 83 49 0 162 244 9 91 2.71e-13 71.6
MsG0580029540.01.T01 AT4G14300 21.939 196 125 4 161 338 1 186 4.76e-13 71.2
MsG0580029540.01.T01 AT4G14300 21.939 196 125 4 161 338 1 186 4.76e-13 71.2
MsG0580029540.01.T01 AT1G33470 37.349 83 52 0 162 244 3 85 5.65e-13 69.3
MsG0580029540.01.T01 AT2G33410 22.652 181 130 2 167 338 7 186 5.93e-13 70.9
MsG0580029540.01.T01 AT1G33470 37.349 83 52 0 162 244 3 85 8.59e-13 68.6
MsG0580029540.01.T01 AT1G33470 37.349 83 52 0 162 244 3 85 8.88e-13 68.6
MsG0580029540.01.T01 AT3G13224 24.845 161 115 1 166 326 10 164 2.01e-12 68.9
MsG0580029540.01.T01 AT5G40490 24.823 141 98 1 186 326 45 177 2.15e-12 69.3
MsG0580029540.01.T01 AT3G54770 38.554 83 51 0 162 244 13 95 2.60e-12 67.4
MsG0580029540.01.T01 AT3G13224 24.375 160 115 1 167 326 20 173 2.84e-12 68.6
MsG0580029540.01.T01 AT3G54770 38.554 83 51 0 162 244 13 95 3.15e-12 67.4
MsG0580029540.01.T01 AT5G11412 36.471 85 54 0 160 244 46 130 1.47e-11 63.5
MsG0580029540.01.T01 AT1G60650 36.842 76 47 1 167 241 13 88 2.03e-11 65.5
MsG0580029540.01.T01 AT1G60650 36.842 76 47 1 167 241 13 88 2.03e-11 65.5
MsG0580029540.01.T01 AT5G53720 38.462 78 48 0 167 244 10 87 2.19e-11 60.8
MsG0580029540.01.T01 AT4G24770 23.626 182 132 5 167 344 151 329 2.95e-11 65.1
MsG0580029540.01.T01 AT4G24770 23.626 182 132 5 167 344 151 329 2.95e-11 65.1

Find 230 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATCGAAGCTTTCGTTTCT+TGG 0.186412 5:+98311097 None:intergenic
TCGGCTTGTTTGGTGGGTTC+AGG 0.212017 5:+98311068 None:intergenic
CATATGTATCCCTACCAAAA+TGG 0.213199 5:+98306718 None:intergenic
TACTTCTTCTTGTTGGGGTT+CGG 0.223272 5:+98311043 None:intergenic
GGGAATTTGCTTGGAGGTCT+TGG 0.253466 5:-98309793 MsG0580029540.01.T01:CDS
TTCGGCTACTTCTTCTTGTT+GGG 0.255517 5:+98311037 None:intergenic
CAACATTAAGAAGGTAATAT+TGG 0.262561 5:-98306981 MsG0580029540.01.T01:three_prime_UTR
CGGTCATAGTATCCCCATTT+TGG 0.262987 5:-98306732 MsG0580029540.01.T01:three_prime_UTR
ATTTCTTCTTCTTGTGTTGT+TGG 0.272882 5:+98311008 None:intergenic
GTAATTTCGGATTGGGTTCT+TGG 0.280286 5:-98306875 MsG0580029540.01.T01:three_prime_UTR
CTTCGGCTACTTCTTCTTGT+TGG 0.283404 5:+98311036 None:intergenic
ACTTCTTCTTGTTGGGGTTC+GGG 0.291185 5:+98311044 None:intergenic
TCCCGGTGGCGCTCCTTACA+TGG 0.295626 5:-98309629 MsG0580029540.01.T01:CDS
TAAAATAGAGATCATACATT+AGG 0.311835 5:-98307081 MsG0580029540.01.T01:intron
GCTGTGACTGATAAGAATTC+TGG 0.318324 5:-98310513 MsG0580029540.01.T01:CDS
TTCGGGTTCGGCTTGTTTGG+TGG 0.320019 5:+98311061 None:intergenic
CTTGACCCAGCTGAGGATTC+TGG 0.326079 5:+98309677 None:intergenic
TTCTTGTTGGGGTTCGGGTT+CGG 0.334657 5:+98311049 None:intergenic
AAAATCTTTGTTCATGGTCT+TGG 0.349785 5:-98310603 MsG0580029540.01.T01:CDS
TGCTGCTGCGTATGGTAATC+AGG 0.354467 5:-98309740 MsG0580029540.01.T01:CDS
GAGGTGGATGATGGTCCATT+GGG 0.357481 5:-98310243 MsG0580029540.01.T01:CDS
CAACGCCGGTGTGCCGGCTC+AGG 0.360674 5:-98309884 MsG0580029540.01.T01:CDS
GCTATGGGATATGGCCAGCC+TGG 0.363089 5:-98309715 MsG0580029540.01.T01:CDS
CTTCTTAATGTTGAAGGTCT+AGG 0.363422 5:+98306991 None:intergenic
CGGTGATTGAATCGAGATTA+GGG 0.364094 5:+98311126 None:intergenic
TTGTATAGTAATTTCGGATT+GGG 0.370361 5:-98306882 MsG0580029540.01.T01:three_prime_UTR
TATTACCTTCTTAATGTTGA+AGG 0.370866 5:+98306985 None:intergenic
TGCCCCTCAAACACCTTATT+CGG 0.374843 5:+98310135 None:intergenic
TGCTGTTAACCTTGTAAGCT+TGG 0.374956 5:+98306607 None:intergenic
CACCGGAAAATCTTTGTTCA+TGG 0.376446 5:-98310609 MsG0580029540.01.T01:CDS
GGCTTCGGCTGGACCTGTTC+CGG 0.376743 5:-98310382 MsG0580029540.01.T01:CDS
CGGCTTGTTTGGTGGGTTCA+GGG 0.376961 5:+98311069 None:intergenic
ATTGAATCGAGATTAGGGTT+AGG 0.382544 5:+98311131 None:intergenic
AATCAGGCTGCTATGGGATA+TGG 0.385926 5:-98309724 MsG0580029540.01.T01:CDS
CTTTGTTCATGGTCTTGGTT+GGG 0.386488 5:-98310598 MsG0580029540.01.T01:CDS
CAAGGAGCTGGATTGGGACT+TGG 0.389500 5:-98309814 MsG0580029540.01.T01:CDS
ATAGTTGTTTAAAGAAAAGT+TGG 0.390348 5:+98306661 None:intergenic
GCGGTGATTGAATCGAGATT+AGG 0.390660 5:+98311125 None:intergenic
GGGTTCGGGTTCGGCTTGTT+TGG 0.394301 5:+98311058 None:intergenic
TGGTGAACATTATATTTCTC+TGG 0.394692 5:+98306816 None:intergenic
TTGGGACTTGGGAATTTGCT+TGG 0.397145 5:-98309802 MsG0580029540.01.T01:CDS
TTGTGTTGTTGGTTCTTCTT+CGG 0.397521 5:+98311019 None:intergenic
ATATGTATCCCTACCAAAAT+GGG 0.397918 5:+98306719 None:intergenic
AAGCAGCCGCAGAAAGTGAT+TGG 0.406418 5:-98310429 MsG0580029540.01.T01:CDS
AAAGAAGGTTGATTGTGGTT+TGG 0.406826 5:-98306791 MsG0580029540.01.T01:three_prime_UTR
ACAAGAGGAAGATCTTGAAT+TGG 0.407627 5:-98310763 MsG0580029540.01.T01:CDS
CAGGGATTGAATCCGGCTCT+TGG 0.407933 5:-98309865 MsG0580029540.01.T01:CDS
GTTTGGTGAAAGAGAGAGAA+AGG 0.410758 5:+98311154 None:intergenic
TTCGGTGGAGGAGCCGGAAC+AGG 0.417847 5:+98310369 None:intergenic
GCTGTTAACCTTGTAAGCTT+GGG 0.420125 5:+98306608 None:intergenic
TCGAGATTAGGGTTAGGGTT+TGG 0.421651 5:+98311137 None:intergenic
AAAATAGAGATCATACATTA+GGG 0.422003 5:-98307080 MsG0580029540.01.T01:intron
TGAGGTTGATCTTCTTCAAT+CGG 0.424776 5:+98310981 None:intergenic
TGCTAATCAAGGAGCTGGAT+TGG 0.425869 5:-98309821 MsG0580029540.01.T01:CDS
TTGAATCGAGATTAGGGTTA+GGG 0.429527 5:+98311132 None:intergenic
GGACTTGGGAATTTGCTTGG+AGG 0.433363 5:-98309799 MsG0580029540.01.T01:CDS
TCTGCTTTGCTTGCTAATCA+AGG 0.433664 5:-98309832 MsG0580029540.01.T01:CDS
TATTGTCAGAAGGCTGTTGA+TGG 0.441220 5:-98310105 MsG0580029540.01.T01:CDS
TCAGACACCGGTGGCGCATT+CGG 0.442681 5:+98310351 None:intergenic
ATCACACGGTGGTCACTTGA+TGG 0.443713 5:-98309935 MsG0580029540.01.T01:CDS
CGAACATTCTCAGACAGATC+TGG 0.446657 5:+98310657 None:intergenic
TTTGTATAGTAATTTCGGAT+TGG 0.450522 5:-98306883 MsG0580029540.01.T01:three_prime_UTR
TGGTATTGTGGCTGCAACCC+AGG 0.451026 5:+98309697 None:intergenic
GGCGCATTCGGTGGAGGAGC+CGG 0.453295 5:+98310363 None:intergenic
TGGTTACAACGCCGGTGTGC+CGG 0.455193 5:-98309890 MsG0580029540.01.T01:CDS
GAGAGAAAGGGGAAAATTAG+TGG 0.455205 5:+98311167 None:intergenic
GCTAATCAAGGAGCTGGATT+GGG 0.456434 5:-98309820 MsG0580029540.01.T01:CDS
CGGTGAAATTGAAGATTGTA+AGG 0.458299 5:-98310535 MsG0580029540.01.T01:CDS
TCTTTGTTCATGGTCTTGGT+TGG 0.459374 5:-98310599 MsG0580029540.01.T01:CDS
TGTAATTGCTCCTTCGTGAA+TGG 0.461004 5:+98310711 None:intergenic
TAGGACTACATCGTGTCAAT+TGG 0.462310 5:-98310403 MsG0580029540.01.T01:CDS
ATATCTTTGTGTCAGCTTCG+TGG 0.462625 5:+98306939 None:intergenic
TCCATCTTTGATGTGGCGGT+TGG 0.464409 5:-98307030 MsG0580029540.01.T01:three_prime_UTR
CGCAGAAAGTGATTGGGAAT+AGG 0.466923 5:-98310422 MsG0580029540.01.T01:CDS
TGGTCCATTGGGGTTGGATA+AGG 0.467413 5:-98310232 MsG0580029540.01.T01:CDS
GTATGGTAATCAGGCTGCTA+TGG 0.467614 5:-98309731 MsG0580029540.01.T01:CDS
GGCGTTGGAAGAGCCGAATA+AGG 0.467801 5:-98310148 MsG0580029540.01.T01:CDS
ATTGAATCCGGCTCTTGGAC+AGG 0.468734 5:-98309860 MsG0580029540.01.T01:CDS
CCTCAGCTGGGTCAAGGTGG+TGG 0.468825 5:-98309670 MsG0580029540.01.T01:CDS
AGCATCGGACTGGGTGTCGT+CGG 0.471058 5:-98310458 MsG0580029540.01.T01:CDS
TCGGGTTCGGCTTGTTTGGT+GGG 0.471504 5:+98311062 None:intergenic
GGAGGTTGCAGAAGATGAAG+AGG 0.471827 5:-98310925 MsG0580029540.01.T01:CDS
ACCCATGTAAGGAGCGCCAC+CGG 0.472419 5:+98309627 None:intergenic
TTGCTTGCTAATCAAGGAGC+TGG 0.472566 5:-98309826 MsG0580029540.01.T01:CDS
GGTTCTAGAAGCTTCTCAAC+AGG 0.476416 5:+98310732 None:intergenic
GCATCGGACTGGGTGTCGTC+GGG 0.476975 5:-98310457 MsG0580029540.01.T01:CDS
TACATCGTGTCAATTGGCTT+CGG 0.478390 5:-98310397 MsG0580029540.01.T01:CDS
ACAAACAGCGCAAAACCCTT+TGG 0.479302 5:+98310198 None:intergenic
GTCTGAGAATGTTCGTCAGC+TGG 0.480431 5:-98310649 MsG0580029540.01.T01:CDS
GCCGGCTCAGGGATTGAATC+CGG 0.480635 5:-98309872 MsG0580029540.01.T01:CDS
GAAGGCTGTTGATGGTCCTA+AGG 0.480805 5:-98310097 MsG0580029540.01.T01:CDS
TGTGTTTATGCATGTCATAA+AGG 0.480820 5:+98306761 None:intergenic
AGAGGTGGATGATGGTCCAT+TGG 0.483246 5:-98310244 MsG0580029540.01.T01:CDS
CACCATCACGGTGGTGGTGG+TGG 0.484347 5:-98310009 MsG0580029540.01.T01:CDS
AATTTGCTTGGAGGTCTTGG+TGG 0.484936 5:-98309790 MsG0580029540.01.T01:CDS
CTGATGTGGACCCCGCTCAC+CGG 0.485472 5:-98310626 MsG0580029540.01.T01:CDS
TCCTCCACCGAATGCGCCAC+CGG 0.486406 5:-98310358 MsG0580029540.01.T01:CDS
AAGGAGCTGGATTGGGACTT+GGG 0.487129 5:-98309813 MsG0580029540.01.T01:CDS
ATTGTGGCTGCAACCCAGGC+TGG 0.487864 5:+98309701 None:intergenic
GGAGGACCAGCTTGATTCAC+CGG 0.487882 5:+98309763 None:intergenic
GGTCACTTGATGGCTCCTAC+TGG 0.489465 5:-98309925 MsG0580029540.01.T01:CDS
GCCAACCGCCACATCAAAGA+TGG 0.489578 5:+98307029 None:intergenic
TAGCCTTGGAAGTGAATAGC+AGG 0.492078 5:+98307675 None:intergenic
TTTGGTGAAAGAGAGAGAAA+GGG 0.492621 5:+98311155 None:intergenic
CGCTCCTTACATGGGTCACT+AGG 0.492696 5:-98309620 MsG0580029540.01.T01:intron
TCAAGTGACCACCGTGTGAT+GGG 0.493869 5:+98309938 None:intergenic
ATGGCTCCTACTGGTCCTGC+TGG 0.494184 5:-98309916 MsG0580029540.01.T01:CDS
GAGCCGAATAAGGTGTTTGA+GGG 0.494430 5:-98310138 MsG0580029540.01.T01:CDS
TCGTGTCAATTGGCTTCGGC+TGG 0.495359 5:-98310393 MsG0580029540.01.T01:CDS
GCGCCACCGGGACCAGGATG+AGG 0.495486 5:+98309640 None:intergenic
ACCGGTGGCGCATTCGGTGG+AGG 0.495710 5:+98310357 None:intergenic
AAGCTTTCGTTTCTTGGCCA+TGG 0.498024 5:+98311103 None:intergenic
GTAAATTATATCATCACTGA+TGG 0.498372 5:-98307707 MsG0580029540.01.T01:three_prime_UTR
CTCACCTAGTGACCCATGTA+AGG 0.500179 5:+98309616 None:intergenic
CTAAAAGTGGCCACACTTGG+TGG 0.502612 5:-98307655 MsG0580029540.01.T01:three_prime_UTR
AAGTATTCACATGGTGGTGG+TGG 0.503763 5:-98309961 MsG0580029540.01.T01:CDS
ACAATACCAGAATCCTCAGC+TGG 0.504026 5:-98309683 MsG0580029540.01.T01:CDS
CTATGGGATATGGCCAGCCT+GGG 0.505656 5:-98309714 MsG0580029540.01.T01:CDS
CCTACTGGTCCTGCTGGTGG+TGG 0.506260 5:-98309910 MsG0580029540.01.T01:CDS
TGCGCTGTTTGTTTATAAGA+CGG 0.506286 5:-98310187 MsG0580029540.01.T01:CDS
ATCAAGTGACCACCGTGTGA+TGG 0.507458 5:+98309937 None:intergenic
GACGGTTGAGAGTGCTAAGA+AGG 0.508593 5:-98310169 MsG0580029540.01.T01:CDS
CAAAAGACGTAGACAAAACC+AGG 0.509793 5:+98307601 None:intergenic
GCCGGATTCAATCCCTGAGC+CGG 0.510375 5:+98309871 None:intergenic
GACAAAGCCTGTCCAAGAGC+CGG 0.512535 5:+98309853 None:intergenic
TAAGGAGCGCCACCGGGACC+AGG 0.518273 5:+98309634 None:intergenic
TCGGCTACTTCTTCTTGTTG+GGG 0.518576 5:+98311038 None:intergenic
GGATGATGGTCCATTGGGGT+TGG 0.519268 5:-98310238 MsG0580029540.01.T01:CDS
AGAGCCGAATAAGGTGTTTG+AGG 0.520194 5:-98310139 MsG0580029540.01.T01:CDS
TTGGGGTTGGATAAGGCGAC+TGG 0.520918 5:-98310225 MsG0580029540.01.T01:CDS
AGCAGCCGCAGAAAGTGATT+GGG 0.521007 5:-98310428 MsG0580029540.01.T01:CDS
TTCAAACAACGCTGCCGTGT+CGG 0.523374 5:-98310841 MsG0580029540.01.T01:CDS
TGATTACCATACGCAGCAGC+AGG 0.524463 5:+98309742 None:intergenic
CCCGGTGGCGCTCCTTACAT+GGG 0.525317 5:-98309628 MsG0580029540.01.T01:CDS
GTTAGACCTCATCCTGGTCC+CGG 0.526551 5:-98309646 MsG0580029540.01.T01:CDS
AACGCCGGTGTGCCGGCTCA+GGG 0.526695 5:-98309883 MsG0580029540.01.T01:CDS
AGGCTAAAAGTGGCCACACT+TGG 0.527528 5:-98307658 MsG0580029540.01.T01:three_prime_UTR
CATCACCATCACGGTGGTGG+TGG 0.527530 5:-98310012 MsG0580029540.01.T01:CDS
TAGTTGTTTAAAGAAAAGTT+GGG 0.528234 5:+98306662 None:intergenic
TATGGTAATCAGGCTGCTAT+GGG 0.529499 5:-98309730 MsG0580029540.01.T01:CDS
AGCTGAGGATTCTGGTATTG+TGG 0.529596 5:+98309685 None:intergenic
GTGTTTATGCATGTCATAAA+GGG 0.530906 5:+98306762 None:intergenic
GGTCCTCCTGCTGCTGCGTA+TGG 0.531826 5:-98309748 MsG0580029540.01.T01:CDS
AGGTGAAGAAGAGCAAGAAG+AGG 0.532986 5:-98310946 MsG0580029540.01.T01:CDS
TGGAGGTCTTGGTGGTGCGC+CGG 0.533288 5:-98309782 MsG0580029540.01.T01:CDS
TACGCTATCCCAAGCTTACA+AGG 0.535697 5:-98306616 MsG0580029540.01.T01:three_prime_UTR
CTTTGAGTATACTCAGACAC+CGG 0.535878 5:+98310339 None:intergenic
CAATAACAACGAAGAACAAG+AGG 0.537174 5:-98310778 MsG0580029540.01.T01:CDS
TTTCAAGCAGTTTGGAGAGG+TGG 0.539323 5:-98310259 MsG0580029540.01.T01:CDS
CATCCTGCTATTCACTTCCA+AGG 0.540009 5:-98307678 MsG0580029540.01.T01:three_prime_UTR
CCCATGTAAGGAGCGCCACC+GGG 0.540286 5:+98309628 None:intergenic
CAGTTTGGAGAGGTGGATGA+TGG 0.542414 5:-98310252 MsG0580029540.01.T01:CDS
TGTTCGTCAGCTGGCTGATG+TGG 0.543983 5:-98310640 MsG0580029540.01.T01:CDS
CACTGCATGCAAGTGTACCC+TGG 0.544192 5:-98307619 MsG0580029540.01.T01:three_prime_UTR
TGAAGAAGAGCAAGAAGAGG+AGG 0.546641 5:-98310943 MsG0580029540.01.T01:CDS
CTAGACCTTCAACATTAAGA+AGG 0.548281 5:-98306990 MsG0580029540.01.T01:three_prime_UTR
TTGGTGAAAGAGAGAGAAAG+GGG 0.552701 5:+98311156 None:intergenic
GACACCGGTGGCGCATTCGG+TGG 0.554738 5:+98310354 None:intergenic
TTCACTTCCAAGGCTAAAAG+TGG 0.558951 5:-98307668 MsG0580029540.01.T01:three_prime_UTR
CTATTCCCAATCACTTTCTG+CGG 0.566327 5:+98310423 None:intergenic
TGAGAGTGCTAAGAAGGCGT+TGG 0.568548 5:-98310163 MsG0580029540.01.T01:CDS
ATTGATCAGACTGCTTGAGA+AGG 0.569516 5:-98307055 MsG0580029540.01.T01:three_prime_UTR
GCTCCTACTGGTCCTGCTGG+TGG 0.571468 5:-98309913 MsG0580029540.01.T01:CDS
GCATACTTTGTATTGTCAGA+AGG 0.572781 5:-98310115 MsG0580029540.01.T01:CDS
TGGTCCTAAGGGTTACAACA+AGG 0.573830 5:-98310085 MsG0580029540.01.T01:CDS
CAGAATCCTCAGCTGGGTCA+AGG 0.575625 5:-98309676 MsG0580029540.01.T01:CDS
CCTAGAAAATCAACAACAAG+AGG 0.576213 5:-98310877 MsG0580029540.01.T01:CDS
GGTGGTGTTAGACCTCATCC+TGG 0.576645 5:-98309652 MsG0580029540.01.T01:CDS
AAGGCGACTGGGAAGCCAAA+GGG 0.581826 5:-98310213 MsG0580029540.01.T01:CDS
GGTGGTGGTGGCCCATCACA+CGG 0.582405 5:-98309949 MsG0580029540.01.T01:CDS
GCGTTGTAACCACCACCAGC+AGG 0.582900 5:+98309901 None:intergenic
CATCATCACCATCACGGTGG+TGG 0.584236 5:-98310015 MsG0580029540.01.T01:CDS
GAAGGATTCCATCTTTGATG+TGG 0.586790 5:-98307037 MsG0580029540.01.T01:three_prime_UTR
AAGGCTGTTGATGGTCCTAA+GGG 0.587938 5:-98310096 MsG0580029540.01.T01:CDS
GGTGCGCCGGTGAATCAAGC+TGG 0.587980 5:-98309769 MsG0580029540.01.T01:CDS
AAGAATTCTGGAAAATCGAA+AGG 0.589314 5:-98310501 MsG0580029540.01.T01:CDS
GTCGGAGCAGACTGTGAAGG+TGG 0.597030 5:-98310823 MsG0580029540.01.T01:CDS
GTCCTAAGGGTTACAACAAG+GGG 0.599613 5:-98310083 MsG0580029540.01.T01:CDS
AGGTGGATGATGGTCCATTG+GGG 0.599675 5:-98310242 MsG0580029540.01.T01:CDS
GGATTCCATCTTTGATGTGG+CGG 0.600586 5:-98307034 MsG0580029540.01.T01:three_prime_UTR
GGTCCTAAGGGTTACAACAA+GGG 0.601882 5:-98310084 MsG0580029540.01.T01:CDS
AAGAAGTATTCACATGGTGG+TGG 0.603956 5:-98309964 MsG0580029540.01.T01:CDS
CAATCCCTGAGCCGGCACAC+CGG 0.607582 5:+98309879 None:intergenic
GTCTAGGTTCAGTTTCATGT+CGG 0.611838 5:+98307007 None:intergenic
TGGGGTTGGATAAGGCGACT+GGG 0.613826 5:-98310224 MsG0580029540.01.T01:CDS
GTCGCCTTATCCAACCCCAA+TGG 0.615111 5:+98310228 None:intergenic
CGTGTCGGAGCAGACTGTGA+AGG 0.617761 5:-98310826 MsG0580029540.01.T01:CDS
CTTTCGTTTCTTGGCCATGG+CGG 0.619617 5:+98311106 None:intergenic
GCATCACCACCCACCAAGTG+TGG 0.619905 5:+98307645 None:intergenic
ACACGTGCTTGTGAAGCAAG+CGG 0.622021 5:-98310691 MsG0580029540.01.T01:CDS
CAACCTCAAAACGAAGGAGA+AGG 0.623160 5:-98310966 MsG0580029540.01.T01:CDS
AAGGTGGAAGCTAACGGTGG+TGG 0.624235 5:-98310807 MsG0580029540.01.T01:CDS
TAAGGCGACTGGGAAGCCAA+AGG 0.624508 5:-98310214 MsG0580029540.01.T01:CDS
CCACCACCAGCAGGACCAGT+AGG 0.625255 5:+98309910 None:intergenic
GTGGTGGTCACTACAATCCA+AGG 0.627985 5:-98309993 MsG0580029540.01.T01:CDS
GCTGGTGGTGGTTACAACGC+CGG 0.630397 5:-98309898 MsG0580029540.01.T01:CDS
TCTCGATTCAATCACCGCCA+TGG 0.631640 5:-98311120 MsG0580029540.01.T01:exon
TAAAAGTGGCCACACTTGGT+GGG 0.632583 5:-98307654 MsG0580029540.01.T01:three_prime_UTR
AATCAACAACAAGAGGGTGG+CGG 0.641401 5:-98310870 MsG0580029540.01.T01:CDS
GAAGATCAACCTCAAAACGA+AGG 0.642987 5:-98310972 MsG0580029540.01.T01:CDS
TTCACCGTACTTCGAAAACG+TGG 0.643668 5:+98310551 None:intergenic
CAATACCAGAATCCTCAGCT+GGG 0.650944 5:-98309682 MsG0580029540.01.T01:CDS
CGGTGTCTGAGTATACTCAA+AGG 0.652912 5:-98310338 MsG0580029540.01.T01:CDS
AGACCTCATCCTGGTCCCGG+TGG 0.660243 5:-98309643 MsG0580029540.01.T01:CDS
CCACCACCTTGACCCAGCTG+AGG 0.661990 5:+98309670 None:intergenic
CATTCGCATCATCACCATCA+CGG 0.665008 5:-98310021 MsG0580029540.01.T01:CDS
GAAAAGAAGTATTCACATGG+TGG 0.667361 5:-98309967 MsG0580029540.01.T01:CDS
ACCGTACTTCGAAAACGTGG+TGG 0.667699 5:+98310554 None:intergenic
AATCCTCAGCTGGGTCAAGG+TGG 0.672405 5:-98309673 MsG0580029540.01.T01:CDS
GCAGATTCTATCATGTTATG+CGG 0.672427 5:+98307732 None:intergenic
TATGTATCCCTACCAAAATG+GGG 0.674547 5:+98306720 None:intergenic
GAAAATCAACAACAAGAGGG+TGG 0.674797 5:-98310873 MsG0580029540.01.T01:CDS
TTACCATACGCAGCAGCAGG+AGG 0.677100 5:+98309745 None:intergenic
AGCCGAATAAGGTGTTTGAG+GGG 0.678592 5:-98310137 MsG0580029540.01.T01:CDS
ACTGTGAAGGTGGAAGCTAA+CGG 0.678694 5:-98310813 MsG0580029540.01.T01:CDS
CTTCACAGTCTGCTCCGACA+CGG 0.679380 5:+98310827 None:intergenic
CTAGAAAATCAACAACAAGA+GGG 0.690323 5:-98310876 MsG0580029540.01.T01:CDS
TGGTGATGATGCGAATGATG+CGG 0.691685 5:+98310027 None:intergenic
GATGAAGAGGATGATCAACA+AGG 0.691927 5:-98310912 MsG0580029540.01.T01:CDS
TGAGTATACTCAGACACCGG+TGG 0.708396 5:+98310342 None:intergenic
AAAGAAAAGAAGTATTCACA+TGG 0.713599 5:-98309970 MsG0580029540.01.T01:CDS
GCTTCTAGAACCATTCACGA+AGG 0.714086 5:-98310721 MsG0580029540.01.T01:CDS
AAGTGGCCACACTTGGTGGG+TGG 0.718329 5:-98307651 MsG0580029540.01.T01:three_prime_UTR
TCCTAAGGGTTACAACAAGG+GGG 0.727464 5:-98310082 MsG0580029540.01.T01:CDS
CCTAAGGGTTACAACAAGGG+GGG 0.736362 5:-98310081 MsG0580029540.01.T01:CDS
GGTGGTGGCCCATCACACGG+TGG 0.744986 5:-98309946 MsG0580029540.01.T01:CDS
CATGCATAAACACAGCTATG+CGG 0.751953 5:-98306752 MsG0580029540.01.T01:three_prime_UTR
AAAAGACGTAGACAAAACCA+GGG 0.754067 5:+98307602 None:intergenic
TCGCATCATCACCATCACGG+TGG 0.781979 5:-98310018 MsG0580029540.01.T01:CDS
GTGAAGGTGGAAGCTAACGG+TGG 0.792915 5:-98310810 MsG0580029540.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTACTTTTATTATGTT+AGG - Chr5:98308722-98308741 MsG0580029540.01.T01:intron 10.0%
!!! TTGTAATTTTAATTACTATT+TGG - Chr5:98309134-98309153 MsG0580029540.01.T01:intron 10.0%
!!! TTGTTTTTATTCAATAAAAA+AGG + Chr5:98308889-98308908 None:intergenic 10.0%
!! TACATGATTTAAAAAAAAGT+CGG + Chr5:98309218-98309237 None:intergenic 15.0%
!! TCTAAATAAATAACATGAAT+TGG + Chr5:98308272-98308291 None:intergenic 15.0%
!!! AATTACTTTTCTTACATTTT+GGG - Chr5:98309634-98309653 MsG0580029540.01.T01:CDS 15.0%
!!! CATTTTAAAATGTTTGTATA+TGG + Chr5:98310696-98310715 None:intergenic 15.0%
!!! TGAATTTTGTATAGTAATTT+CGG - Chr5:98310926-98310945 MsG0580029540.01.T01:CDS 15.0%
!! AAAATAGAGATCATACATTA+GGG - Chr5:98310734-98310753 MsG0580029540.01.T01:CDS 20.0%
!! ACATGATTTAAAAAAAAGTC+GGG + Chr5:98309217-98309236 None:intergenic 20.0%
!! ATAAAATGATAAATGCCTTA+TGG + Chr5:98309855-98309874 None:intergenic 20.0%
!! ATAAACATTCAAATGATAGA+CGG + Chr5:98309584-98309603 None:intergenic 20.0%
!! ATAGTTGTTTAAAGAAAAGT+TGG + Chr5:98311156-98311175 None:intergenic 20.0%
!! ATTATACTTTGTTAAAAAGC+TGG + Chr5:98309458-98309477 None:intergenic 20.0%
!! TAAAATAGAGATCATACATT+AGG - Chr5:98310733-98310752 MsG0580029540.01.T01:CDS 20.0%
!! TAGAAATCCAGATAAATATA+AGG + Chr5:98309330-98309349 None:intergenic 20.0%
!! TAGTTGTTTAAAGAAAAGTT+GGG + Chr5:98311155-98311174 None:intergenic 20.0%
!! TATGACAATAGATGTTAAAA+GGG + Chr5:98308866-98308885 None:intergenic 20.0%
!! TATTTAGAAATGTTTGTGAA+GGG - Chr5:98308284-98308303 MsG0580029540.01.T01:intron 20.0%
!! TGTAAAATCTTTAATTGTGT+CGG - Chr5:98308372-98308391 MsG0580029540.01.T01:intron 20.0%
!! TTAAAAGATGCATTTGAATA+GGG + Chr5:98309112-98309131 None:intergenic 20.0%
!! TTAAAGAAAGAATACATCAT+GGG - Chr5:98309491-98309510 MsG0580029540.01.T01:intron 20.0%
!! TTATTTAGAAATGTTTGTGA+AGG - Chr5:98308283-98308302 MsG0580029540.01.T01:intron 20.0%
!! TTTAAAAGATGCATTTGAAT+AGG + Chr5:98309113-98309132 None:intergenic 20.0%
!!! ATTTGAATGTTTATTTCTTC+TGG - Chr5:98309590-98309609 MsG0580029540.01.T01:intron 20.0%
!!! CAATTACTTTTCTTACATTT+TGG - Chr5:98309633-98309652 MsG0580029540.01.T01:CDS 20.0%
!!! CTTTTATTTTGTTTAAGCAT+CGG - Chr5:98307341-98307360 MsG0580029540.01.T01:intron 20.0%
!!! TTTGAATGTTTATTTCTTCT+GGG - Chr5:98309591-98309610 MsG0580029540.01.T01:intron 20.0%
! AAAATGAATGCAAATACACT+TGG + Chr5:98308414-98308433 None:intergenic 25.0%
! AAACAACTTATAACTATGCT+TGG - Chr5:98308903-98308922 MsG0580029540.01.T01:intron 25.0%
! ACATTGAATACCTAAAAAAG+AGG + Chr5:98309901-98309920 None:intergenic 25.0%
! ATAATGTTCACCAAAAAAGA+AGG - Chr5:98311008-98311027 MsG0580029540.01.T01:CDS 25.0%
! ATCTTTGTACAATGTCAAAA+TGG - Chr5:98310575-98310594 MsG0580029540.01.T01:CDS 25.0%
! CAACATTAAGAAGGTAATAT+TGG - Chr5:98310833-98310852 MsG0580029540.01.T01:CDS 25.0%
! CATTGAATACCTAAAAAAGA+GGG + Chr5:98309900-98309919 None:intergenic 25.0%
! CTTAAAGAAAGAATACATCA+TGG - Chr5:98309490-98309509 MsG0580029540.01.T01:intron 25.0%
! CTTATTAAAGCAAAACAGAA+AGG + Chr5:98309948-98309967 None:intergenic 25.0%
! GTAAAATCTTTAATTGTGTC+GGG - Chr5:98308373-98308392 MsG0580029540.01.T01:intron 25.0%
! GTAAATTATATCATCACTGA+TGG - Chr5:98310107-98310126 MsG0580029540.01.T01:CDS 25.0%
! GTATAAACACTAATGAATGA+AGG + Chr5:98308243-98308262 None:intergenic 25.0%
! GTATGACAATAGATGTTAAA+AGG + Chr5:98308867-98308886 None:intergenic 25.0%
! TAAACATTCAAATGATAGAC+GGG + Chr5:98309583-98309602 None:intergenic 25.0%
! TATTACCTTCTTAATGTTGA+AGG + Chr5:98310832-98310851 None:intergenic 25.0%
! TTATTCCGGTATCTATATTT+GGG - Chr5:98310629-98310648 MsG0580029540.01.T01:CDS 25.0%
! TTGTATAGTAATTTCGGATT+GGG - Chr5:98310932-98310951 MsG0580029540.01.T01:CDS 25.0%
! TTTATTCCGGTATCTATATT+TGG - Chr5:98310628-98310647 MsG0580029540.01.T01:CDS 25.0%
! TTTGTATAGTAATTTCGGAT+TGG - Chr5:98310931-98310950 MsG0580029540.01.T01:CDS 25.0%
!! GAAGGGTTAATATTTTATTC+CGG - Chr5:98310615-98310634 MsG0580029540.01.T01:CDS 25.0%
!! TCATTTGACTTTGATTTATG+AGG - Chr5:98309428-98309447 MsG0580029540.01.T01:intron 25.0%
!! TTGCTCGATTTATATCTTTT+TGG - Chr5:98310426-98310445 MsG0580029540.01.T01:CDS 25.0%
!!! AAAGAAAAGAAGTATTCACA+TGG - Chr5:98307844-98307863 MsG0580029540.01.T01:intron 25.0%
!!! ATGCATCAAACATTTTGTTT+TGG - Chr5:98309058-98309077 MsG0580029540.01.T01:intron 25.0%
!!! CTGGTTATTTTTTATGCTTA+TGG - Chr5:98309526-98309545 MsG0580029540.01.T01:intron 25.0%
!!! TTGTTTTTTGACAGTCTTTT+TGG - Chr5:98310391-98310410 MsG0580029540.01.T01:CDS 25.0%
AAAATACAGGTTTCAGAATC+CGG + Chr5:98309171-98309190 None:intergenic 30.0%
AAAATCTTTGTTCATGGTCT+TGG - Chr5:98307211-98307230 MsG0580029540.01.T01:intron 30.0%
AAAGATCAAAACCTCTATTG+AGG + Chr5:98309831-98309850 None:intergenic 30.0%
AAATGTTTGATGCATCTATG+AGG + Chr5:98309053-98309072 None:intergenic 30.0%
AACTTCGCAAGCAAATAAAA+TGG + Chr5:98310037-98310056 None:intergenic 30.0%
AAGATCGTTGTATACTTTGT+TGG - Chr5:98308464-98308483 MsG0580029540.01.T01:intron 30.0%
AATGTTTGATGCATCTATGA+GGG + Chr5:98309052-98309071 None:intergenic 30.0%
ATATGTATCCCTACCAAAAT+GGG + Chr5:98311098-98311117 None:intergenic 30.0%
ATTTCTTCTTCTTGTGTTGT+TGG + Chr5:98306809-98306828 None:intergenic 30.0%
CTACGATAGAAAGAAAATAC+AGG + Chr5:98309184-98309203 None:intergenic 30.0%
CTAGAAAATCAACAACAAGA+GGG - Chr5:98306938-98306957 MsG0580029540.01.T01:three_prime_UTR 30.0%
CTATTTGGTTACTAAAGAAC+CGG - Chr5:98309149-98309168 MsG0580029540.01.T01:intron 30.0%
CTCTGTACCCAAAAAAAATT+GGG + Chr5:98311126-98311145 None:intergenic 30.0%
CTGTAGACCTTATATTTATC+TGG - Chr5:98309320-98309339 MsG0580029540.01.T01:intron 30.0%
GAGATTCTGTAAGTTAAAGA+AGG + Chr5:98310300-98310319 None:intergenic 30.0%
GCAAAACAGAAAGGAAAAAT+AGG + Chr5:98309939-98309958 None:intergenic 30.0%
GTAATCAGTTTACCAAAACA+TGG - Chr5:98308501-98308520 MsG0580029540.01.T01:intron 30.0%
GTGTTTATGCATGTCATAAA+GGG + Chr5:98311055-98311074 None:intergenic 30.0%
TCTGTACCCAAAAAAAATTG+GGG + Chr5:98311125-98311144 None:intergenic 30.0%
TGGGTCAAGTATCTATATTT+GGG - Chr5:98310648-98310667 MsG0580029540.01.T01:CDS 30.0%
TGGTGAACATTATATTTCTC+TGG + Chr5:98311001-98311020 None:intergenic 30.0%
TGTGTTTATGCATGTCATAA+AGG + Chr5:98311056-98311075 None:intergenic 30.0%
TTGGGTCAAGTATCTATATT+TGG - Chr5:98310647-98310666 MsG0580029540.01.T01:CDS 30.0%
! AACTTTGTTTAGCAAGTGTT+AGG - Chr5:98309986-98310005 MsG0580029540.01.T01:CDS 30.0%
! AAGAATTCTGGAAAATCGAA+AGG - Chr5:98307313-98307332 MsG0580029540.01.T01:intron 30.0%
! GAATACTTCTTTTCTTTCCT+TGG + Chr5:98307841-98307860 None:intergenic 30.0%
! GCTTTTAACAACGAAAAATG+AGG + Chr5:98309744-98309763 None:intergenic 30.0%
! GGAATTGTTTGAAACAACTA+CGG - Chr5:98308924-98308943 MsG0580029540.01.T01:intron 30.0%
! TAGCCTTAATAACCAAAACA+AGG + Chr5:98308534-98308553 None:intergenic 30.0%
!! AGGTTTTGATCTTTACCATA+AGG - Chr5:98309837-98309856 MsG0580029540.01.T01:CDS 30.0%
!! ATTTTATTTGCTTGCGAAGT+TGG - Chr5:98310036-98310055 MsG0580029540.01.T01:CDS 30.0%
!!! ATACAACGATCTTTTTTCGT+TGG + Chr5:98308457-98308476 None:intergenic 30.0%
!!! ATGCATCCCCAATTTTTTTT+GGG - Chr5:98311116-98311135 MsG0580029540.01.T01:exon 30.0%
!!! CTCTTGTTGTTGATTTTCTA+GGG + Chr5:98306939-98306958 None:intergenic 30.0%
!!! GTTCCTTGTTTTGGTTATTA+AGG - Chr5:98308528-98308547 MsG0580029540.01.T01:intron 30.0%
!!! TATGCATCCCCAATTTTTTT+TGG - Chr5:98311115-98311134 MsG0580029540.01.T01:exon 30.0%
!!! TTTTCTTACATTTTGGGTTG+TGG - Chr5:98309640-98309659 MsG0580029540.01.T01:CDS 30.0%
AAAAGACGTAGACAAAACCA+GGG + Chr5:98310215-98310234 None:intergenic 35.0%
ACAAGAGGAAGATCTTGAAT+TGG - Chr5:98307051-98307070 MsG0580029540.01.T01:three_prime_UTR 35.0%
AGAAAGGAAAAATAGGCACT+AGG + Chr5:98309932-98309951 None:intergenic 35.0%
AGAAATGTTTGTGAAGGGTT+AGG - Chr5:98308289-98308308 MsG0580029540.01.T01:intron 35.0%
AGACAGTCAATAGTTAAGAG+AGG + Chr5:98310258-98310277 None:intergenic 35.0%
ATCAAAACCTCTATTGAGGA+AGG + Chr5:98309827-98309846 None:intergenic 35.0%
ATTGAATCGAGATTAGGGTT+AGG + Chr5:98306686-98306705 None:intergenic 35.0%
CAATAACAACGAAGAACAAG+AGG - Chr5:98307036-98307055 MsG0580029540.01.T01:three_prime_UTR 35.0%
CATATGTATCCCTACCAAAA+TGG + Chr5:98311099-98311118 None:intergenic 35.0%
CCTAGAAAATCAACAACAAG+AGG - Chr5:98306937-98306956 MsG0580029540.01.T01:three_prime_UTR 35.0%
CGGTGAAATTGAAGATTGTA+AGG - Chr5:98307279-98307298 MsG0580029540.01.T01:intron 35.0%
CTAGACCTTCAACATTAAGA+AGG - Chr5:98310824-98310843 MsG0580029540.01.T01:CDS 35.0%
CTGAGGAATGTTTGAATGTT+GGG - Chr5:98309262-98309281 MsG0580029540.01.T01:intron 35.0%
CTTCTTAATGTTGAAGGTCT+AGG + Chr5:98310826-98310845 None:intergenic 35.0%
CTTGACCCAAATATAGATAC+CGG + Chr5:98310637-98310656 None:intergenic 35.0%
GATTGTTGAACTTGTCTAGT+TGG - Chr5:98308323-98308342 MsG0580029540.01.T01:intron 35.0%
GCAGATTCTATCATGTTATG+CGG + Chr5:98310085-98310104 None:intergenic 35.0%
GCATACTTTGTATTGTCAGA+AGG - Chr5:98307699-98307718 MsG0580029540.01.T01:three_prime_UTR 35.0%
GCTCTGTACCCAAAAAAAAT+TGG + Chr5:98311127-98311146 None:intergenic 35.0%
TAGCTGTAACATCCAAAACA+AGG + Chr5:98308619-98308638 None:intergenic 35.0%
TAGCTTCATAAAGCATGACT+TGG - Chr5:98309372-98309391 MsG0580029540.01.T01:intron 35.0%
TATGTATCCCTACCAAAATG+GGG + Chr5:98311097-98311116 None:intergenic 35.0%
TCTGAGGAATGTTTGAATGT+TGG - Chr5:98309261-98309280 MsG0580029540.01.T01:intron 35.0%
TGAGGAAGGTGAAAGAAAAA+TGG + Chr5:98309813-98309832 None:intergenic 35.0%
TGCGCTGTTTGTTTATAAGA+CGG - Chr5:98307627-98307646 MsG0580029540.01.T01:three_prime_UTR 35.0%
TTGAATCGAGATTAGGGTTA+GGG + Chr5:98306685-98306704 None:intergenic 35.0%
TTTGGTGAAAGAGAGAGAAA+GGG + Chr5:98306662-98306681 None:intergenic 35.0%
! AAAGAAGGTTGATTGTGGTT+TGG - Chr5:98311023-98311042 MsG0580029540.01.T01:CDS 35.0%
! AATACATCATGGGAGTTTTG+TGG - Chr5:98309501-98309520 MsG0580029540.01.T01:intron 35.0%
! AATCTATTTTGCAGCATCAG+AGG - Chr5:98308955-98308974 MsG0580029540.01.T01:intron 35.0%
! CCAAAAAAGAAGGTTGATTG+TGG - Chr5:98311018-98311037 MsG0580029540.01.T01:CDS 35.0%
! CTCTTAACTATTGACTGTCT+GGG - Chr5:98310258-98310277 MsG0580029540.01.T01:CDS 35.0%
! GACCATGAACAAAGATTTTC+CGG + Chr5:98307210-98307229 None:intergenic 35.0%
! TCTCTTAACTATTGACTGTC+TGG - Chr5:98310257-98310276 MsG0580029540.01.T01:CDS 35.0%
! TGAGGTTGATCTTCTTCAAT+CGG + Chr5:98306836-98306855 None:intergenic 35.0%
!! ATAGTATCCCCATTTTGGTA+GGG - Chr5:98311087-98311106 MsG0580029540.01.T01:CDS 35.0%
!! GAAAAGAAGTATTCACATGG+TGG - Chr5:98307847-98307866 MsG0580029540.01.T01:intron 35.0%
!! TGAACTTGTCTAGTTGGTTT+TGG - Chr5:98308329-98308348 MsG0580029540.01.T01:intron 35.0%
!! TTGTGTTGTTGGTTCTTCTT+CGG + Chr5:98306798-98306817 None:intergenic 35.0%
!! TTTGGGTTGTGGATTTAGAA+TGG - Chr5:98309651-98309670 MsG0580029540.01.T01:CDS 35.0%
!!! ACGTCTTTTGAGTTCATGAT+GGG - Chr5:98310226-98310245 MsG0580029540.01.T01:CDS 35.0%
!!! ATTTTGTTTAAGCATCGGAC+TGG - Chr5:98307346-98307365 MsG0580029540.01.T01:intron 35.0%
!!! CCACAATCAACCTTCTTTTT+TGG + Chr5:98311021-98311040 None:intergenic 35.0%
!!! CCTCTTGTTGTTGATTTTCT+AGG + Chr5:98306940-98306959 None:intergenic 35.0%
!!! CTTGAGTTTTTCAAGCAGTT+TGG - Chr5:98307547-98307566 MsG0580029540.01.T01:intron 35.0%
!!! TACGTCTTTTGAGTTCATGA+TGG - Chr5:98310225-98310244 MsG0580029540.01.T01:CDS 35.0%
!!! TTTTGTTTAAGCATCGGACT+GGG - Chr5:98307347-98307366 MsG0580029540.01.T01:intron 35.0%
AAAAACTCAAGCAGCTTCTG+AGG + Chr5:98307538-98307557 None:intergenic 40.0%
ACATTCCTCAGATTCCACAA+AGG + Chr5:98309253-98309272 None:intergenic 40.0%
AGATCGAAGCTTTCGTTTCT+TGG + Chr5:98306720-98306739 None:intergenic 40.0%
AGATTCCACAAAGGAACAAG+AGG + Chr5:98309244-98309263 None:intergenic 40.0%
ATATCTTTGTGTCAGCTTCG+TGG + Chr5:98310878-98310897 None:intergenic 40.0%
ATTGACTGTCTGGGAAAGTT+CGG - Chr5:98310267-98310286 MsG0580029540.01.T01:CDS 40.0%
ATTGATCAGACTGCTTGAGA+AGG - Chr5:98310759-98310778 MsG0580029540.01.T01:CDS 40.0%
CAAAACAAGGAACAAAGCCA+AGG + Chr5:98308606-98308625 None:intergenic 40.0%
CAAAAGACGTAGACAAAACC+AGG + Chr5:98310216-98310235 None:intergenic 40.0%
CACCGGAAAATCTTTGTTCA+TGG - Chr5:98307205-98307224 MsG0580029540.01.T01:intron 40.0%
CATGCATAAACACAGCTATG+CGG - Chr5:98311062-98311081 MsG0580029540.01.T01:CDS 40.0%
CGGTGATTGAATCGAGATTA+GGG + Chr5:98306691-98306710 None:intergenic 40.0%
CTATTCCCAATCACTTTCTG+CGG + Chr5:98307394-98307413 None:intergenic 40.0%
CTTTGAGTATACTCAGACAC+CGG + Chr5:98307478-98307497 None:intergenic 40.0%
GAAAATCAACAACAAGAGGG+TGG - Chr5:98306941-98306960 MsG0580029540.01.T01:three_prime_UTR 40.0%
GAAGATCAACCTCAAAACGA+AGG - Chr5:98306842-98306861 MsG0580029540.01.T01:three_prime_UTR 40.0%
GAAGGATTCCATCTTTGATG+TGG - Chr5:98310777-98310796 MsG0580029540.01.T01:CDS 40.0%
GAATACCTAAAAAAGAGGGC+TGG + Chr5:98309896-98309915 None:intergenic 40.0%
GAGAGAAAGGGGAAAATTAG+TGG + Chr5:98306650-98306669 None:intergenic 40.0%
GATGAAGAGGATGATCAACA+AGG - Chr5:98306902-98306921 MsG0580029540.01.T01:three_prime_UTR 40.0%
GCTGTGACTGATAAGAATTC+TGG - Chr5:98307301-98307320 MsG0580029540.01.T01:intron 40.0%
GGTGTGATTGATATGCTGTT+AGG + Chr5:98310016-98310035 None:intergenic 40.0%
GTCTAGGTTCAGTTTCATGT+CGG + Chr5:98310810-98310829 None:intergenic 40.0%
TACTTCTTCTTGTTGGGGTT+CGG + Chr5:98306774-98306793 None:intergenic 40.0%
TAGGACTACATCGTGTCAAT+TGG - Chr5:98307411-98307430 MsG0580029540.01.T01:intron 40.0%
TAGTACCTCTTGTTCCTTTG+TGG - Chr5:98309236-98309255 MsG0580029540.01.T01:intron 40.0%
TATGGTAATCAGGCTGCTAT+GGG - Chr5:98308084-98308103 MsG0580029540.01.T01:intron 40.0%
TATTCAACAACGACGAGCTT+TGG - Chr5:98309774-98309793 MsG0580029540.01.T01:CDS 40.0%
TATTGTCAGAAGGCTGTTGA+TGG - Chr5:98307709-98307728 MsG0580029540.01.T01:three_prime_UTR 40.0%
TCTTCAACTGTCACCAAGTT+GGG - Chr5:98310339-98310358 MsG0580029540.01.T01:CDS 40.0%
TCTTTCACCTTCCTCAATAG+AGG - Chr5:98309817-98309836 MsG0580029540.01.T01:CDS 40.0%
TGTAATTGCTCCTTCGTGAA+TGG + Chr5:98307106-98307125 None:intergenic 40.0%
TTCACTTCCAAGGCTAAAAG+TGG - Chr5:98310146-98310165 MsG0580029540.01.T01:CDS 40.0%
TTCGGCTACTTCTTCTTGTT+GGG + Chr5:98306780-98306799 None:intergenic 40.0%
TTCTTCAACTGTCACCAAGT+TGG - Chr5:98310338-98310357 MsG0580029540.01.T01:CDS 40.0%
TTGGTGAAAGAGAGAGAAAG+GGG + Chr5:98306661-98306680 None:intergenic 40.0%
TTGTTCCTTTGTGGAATCTG+AGG - Chr5:98309245-98309264 MsG0580029540.01.T01:intron 40.0%
! AACAAAGATTTTCCGGTGAG+CGG + Chr5:98307203-98307222 None:intergenic 40.0%
! CTTTGTTCATGGTCTTGGTT+GGG - Chr5:98307216-98307235 MsG0580029540.01.T01:intron 40.0%
! GTAATTTCGGATTGGGTTCT+TGG - Chr5:98310939-98310958 MsG0580029540.01.T01:CDS 40.0%
! GTTTGGTGAAAGAGAGAGAA+AGG + Chr5:98306663-98306682 None:intergenic 40.0%
! TACATCGTGTCAATTGGCTT+CGG - Chr5:98307417-98307436 MsG0580029540.01.T01:intron 40.0%
! TCTGCTTTGCTTGCTAATCA+AGG - Chr5:98307982-98308001 MsG0580029540.01.T01:intron 40.0%
! TCTTTGTTCATGGTCTTGGT+TGG - Chr5:98307215-98307234 MsG0580029540.01.T01:intron 40.0%
!! AAGAAGTATTCACATGGTGG+TGG - Chr5:98307850-98307869 MsG0580029540.01.T01:intron 40.0%
!! CATAGTATCCCCATTTTGGT+AGG - Chr5:98311086-98311105 MsG0580029540.01.T01:CDS 40.0%
!!! CAAATCCAGCCCTCTTTTTT+AGG - Chr5:98309888-98309907 MsG0580029540.01.T01:CDS 40.0%
!!! CTTGGCTTTGTTCCTTGTTT+TGG - Chr5:98308604-98308623 MsG0580029540.01.T01:intron 40.0%
!!! GTTTTTCAAGCAGTTTGGAG+AGG - Chr5:98307552-98307571 MsG0580029540.01.T01:intron 40.0%
AAAGAGGGCTGGATTTGTGA+AGG + Chr5:98309885-98309904 None:intergenic 45.0%
AAGCTTTCGTTTCTTGGCCA+TGG + Chr5:98306714-98306733 None:intergenic 45.0%
AATCAACAACAAGAGGGTGG+CGG - Chr5:98306944-98306963 MsG0580029540.01.T01:three_prime_UTR 45.0%
AATCAGGCTGCTATGGGATA+TGG - Chr5:98308090-98308109 MsG0580029540.01.T01:intron 45.0%
ACAAACAGCGCAAAACCCTT+TGG + Chr5:98307619-98307638 None:intergenic 45.0%
ACAATACCAGAATCCTCAGC+TGG - Chr5:98308131-98308150 MsG0580029540.01.T01:intron 45.0%
ACTGTGAAGGTGGAAGCTAA+CGG - Chr5:98307001-98307020 MsG0580029540.01.T01:three_prime_UTR 45.0%
ACTTCTTCTTGTTGGGGTTC+GGG + Chr5:98306773-98306792 None:intergenic 45.0%
AGATGCATTTGAATAGGGCC+TGG + Chr5:98309107-98309126 None:intergenic 45.0%
AGCTGAGGATTCTGGTATTG+TGG + Chr5:98308132-98308151 None:intergenic 45.0%
AGGTGAAGAAGAGCAAGAAG+AGG - Chr5:98306868-98306887 MsG0580029540.01.T01:three_prime_UTR 45.0%
ATTTGCTTGCGAAGTTGGCT+TGG - Chr5:98310041-98310060 MsG0580029540.01.T01:CDS 45.0%
CAACCTCAAAACGAAGGAGA+AGG - Chr5:98306848-98306867 MsG0580029540.01.T01:three_prime_UTR 45.0%
CAATACCAGAATCCTCAGCT+GGG - Chr5:98308132-98308151 MsG0580029540.01.T01:intron 45.0%
CATCCTGCTATTCACTTCCA+AGG - Chr5:98310136-98310155 MsG0580029540.01.T01:CDS 45.0%
CATTCGCATCATCACCATCA+CGG - Chr5:98307793-98307812 MsG0580029540.01.T01:intron 45.0%
CGAACATTCTCAGACAGATC+TGG + Chr5:98307160-98307179 None:intergenic 45.0%
CGCAGAAAGTGATTGGGAAT+AGG - Chr5:98307392-98307411 MsG0580029540.01.T01:intron 45.0%
CGGTGTCTGAGTATACTCAA+AGG - Chr5:98307476-98307495 MsG0580029540.01.T01:intron 45.0%
CTTCGGCTACTTCTTCTTGT+TGG + Chr5:98306781-98306800 None:intergenic 45.0%
GCGGTGATTGAATCGAGATT+AGG + Chr5:98306692-98306711 None:intergenic 45.0%
GCTAATCAAGGAGCTGGATT+GGG - Chr5:98307994-98308013 MsG0580029540.01.T01:intron 45.0%
GGATTCCATCTTTGATGTGG+CGG - Chr5:98310780-98310799 MsG0580029540.01.T01:CDS 45.0%
GGTCCTAAGGGTTACAACAA+GGG - Chr5:98307730-98307749 MsG0580029540.01.T01:three_prime_UTR 45.0%
GTATGGTAATCAGGCTGCTA+TGG - Chr5:98308083-98308102 MsG0580029540.01.T01:intron 45.0%
GTCCTAAGGGTTACAACAAG+GGG - Chr5:98307731-98307750 MsG0580029540.01.T01:three_prime_UTR 45.0%
TAAAAGTGGCCACACTTGGT+GGG - Chr5:98310160-98310179 MsG0580029540.01.T01:CDS 45.0%
TACGCTATCCCAAGCTTACA+AGG - Chr5:98311198-98311217 MsG0580029540.01.T01:five_prime_UTR 45.0%
TCCTAAGGGTTACAACAAGG+GGG - Chr5:98307732-98307751 MsG0580029540.01.T01:three_prime_UTR 45.0%
TCGAGATTAGGGTTAGGGTT+TGG + Chr5:98306680-98306699 None:intergenic 45.0%
TCGGCTACTTCTTCTTGTTG+GGG + Chr5:98306779-98306798 None:intergenic 45.0%
TGAAGAAGAGCAAGAAGAGG+AGG - Chr5:98306871-98306890 MsG0580029540.01.T01:three_prime_UTR 45.0%
TGAAGTTCGTAAGCCCAACT+TGG + Chr5:98310355-98310374 None:intergenic 45.0%
TGCCCCTCAAACACCTTATT+CGG + Chr5:98307682-98307701 None:intergenic 45.0%
TGCTAATCAAGGAGCTGGAT+TGG - Chr5:98307993-98308012 MsG0580029540.01.T01:intron 45.0%
TGGTCCTAAGGGTTACAACA+AGG - Chr5:98307729-98307748 MsG0580029540.01.T01:three_prime_UTR 45.0%
TTCACACTGCATACACACCT+TGG - Chr5:98308586-98308605 MsG0580029540.01.T01:intron 45.0%
TTCACCGTACTTCGAAAACG+TGG + Chr5:98307266-98307285 None:intergenic 45.0%
TTGACTGTCTGGGAAAGTTC+GGG - Chr5:98310268-98310287 MsG0580029540.01.T01:CDS 45.0%
TTTCAAGCAGTTTGGAGAGG+TGG - Chr5:98307555-98307574 MsG0580029540.01.T01:intron 45.0%
! AATTTGCTTGGAGGTCTTGG+TGG - Chr5:98308024-98308043 MsG0580029540.01.T01:intron 45.0%
! ACAAAGATTTTCCGGTGAGC+GGG + Chr5:98307202-98307221 None:intergenic 45.0%
! ACCACCACGTTTTCGAAGTA+CGG - Chr5:98307259-98307278 MsG0580029540.01.T01:intron 45.0%
! AGAGCCGAATAAGGTGTTTG+AGG - Chr5:98307675-98307694 MsG0580029540.01.T01:three_prime_UTR 45.0%
! AGCCGAATAAGGTGTTTGAG+GGG - Chr5:98307677-98307696 MsG0580029540.01.T01:three_prime_UTR 45.0%
! CAAGGAACAGAGCCATGTTT+TGG + Chr5:98308516-98308535 None:intergenic 45.0%
! CGGTCATAGTATCCCCATTT+TGG - Chr5:98311082-98311101 MsG0580029540.01.T01:CDS 45.0%
! GAGCCGAATAAGGTGTTTGA+GGG - Chr5:98307676-98307695 MsG0580029540.01.T01:three_prime_UTR 45.0%
! TAGCCTTGGAAGTGAATAGC+AGG + Chr5:98310142-98310161 None:intergenic 45.0%
! TCACCTTCTCCTTCGTTTTG+AGG + Chr5:98306854-98306873 None:intergenic 45.0%
! TGGTGATGATGCGAATGATG+CGG + Chr5:98307790-98307809 None:intergenic 45.0%
! TTGCTTGCTAATCAAGGAGC+TGG - Chr5:98307988-98308007 MsG0580029540.01.T01:intron 45.0%
! TTGGGACTTGGGAATTTGCT+TGG - Chr5:98308012-98308031 MsG0580029540.01.T01:intron 45.0%
!! AAGGCTGTTGATGGTCCTAA+GGG - Chr5:98307718-98307737 MsG0580029540.01.T01:three_prime_UTR 45.0%
!! AAGTATTCACATGGTGGTGG+TGG - Chr5:98307853-98307872 MsG0580029540.01.T01:intron 45.0%
!! CATGGCTCTGTTCCTTGTTT+TGG - Chr5:98308519-98308538 MsG0580029540.01.T01:intron 45.0%
!! GCTGATTCTTCTGAAGTACC+AGG - Chr5:98309086-98309105 MsG0580029540.01.T01:intron 45.0%
!! GCTTCTAGAACCATTCACGA+AGG - Chr5:98307093-98307112 MsG0580029540.01.T01:intron 45.0%
!! GGTTCTAGAAGCTTCTCAAC+AGG + Chr5:98307085-98307104 None:intergenic 45.0%
!! TCATGGGAGTTTTGTGGTTC+TGG - Chr5:98309507-98309526 MsG0580029540.01.T01:intron 45.0%
!! TTTATATAAAAAAAAAAACT+CGG + Chr5:98310487-98310506 None:intergenic 5.0%
!!! ATTAAATTTTCATAATTATT+TGG - Chr5:98308693-98308712 MsG0580029540.01.T01:intron 5.0%
AAGCAGCCGCAGAAAGTGAT+TGG - Chr5:98307385-98307404 MsG0580029540.01.T01:intron 50.0%
ACACGTGCTTGTGAAGCAAG+CGG - Chr5:98307123-98307142 MsG0580029540.01.T01:intron 50.0%
ACCGTACTTCGAAAACGTGG+TGG + Chr5:98307263-98307282 None:intergenic 50.0%
AGCAGCCGCAGAAAGTGATT+GGG - Chr5:98307386-98307405 MsG0580029540.01.T01:intron 50.0%
AGGCTAAAAGTGGCCACACT+TGG - Chr5:98310156-98310175 MsG0580029540.01.T01:CDS 50.0%
AGGGCTGGATTTGTGAAGGT+GGG + Chr5:98309881-98309900 None:intergenic 50.0%
ATCAAGTGACCACCGTGTGA+TGG + Chr5:98307880-98307899 None:intergenic 50.0%
ATCACACGGTGGTCACTTGA+TGG - Chr5:98307879-98307898 MsG0580029540.01.T01:intron 50.0%
ATTGAATCCGGCTCTTGGAC+AGG - Chr5:98307954-98307973 MsG0580029540.01.T01:intron 50.0%
CAGTTTGGAGAGGTGGATGA+TGG - Chr5:98307562-98307581 MsG0580029540.01.T01:intron 50.0%
CCTAAGGGTTACAACAAGGG+GGG - Chr5:98307733-98307752 MsG0580029540.01.T01:three_prime_UTR 50.0%
CTAAAAGTGGCCACACTTGG+TGG - Chr5:98310159-98310178 MsG0580029540.01.T01:CDS 50.0%
CTCACCTAGTGACCCATGTA+AGG + Chr5:98308201-98308220 None:intergenic 50.0%
CTTTCGTTTCTTGGCCATGG+CGG + Chr5:98306711-98306730 None:intergenic 50.0%
GGAGGTTGCAGAAGATGAAG+AGG - Chr5:98306889-98306908 MsG0580029540.01.T01:three_prime_UTR 50.0%
GTCTGAGAATGTTCGTCAGC+TGG - Chr5:98307165-98307184 MsG0580029540.01.T01:intron 50.0%
GTGGTGGTCACTACAATCCA+AGG - Chr5:98307821-98307840 MsG0580029540.01.T01:intron 50.0%
TCAAGTGACCACCGTGTGAT+GGG + Chr5:98307879-98307898 None:intergenic 50.0%
TCCATCTTTGATGTGGCGGT+TGG - Chr5:98310784-98310803 MsG0580029540.01.T01:CDS 50.0%
TCTCGATTCAATCACCGCCA+TGG - Chr5:98306694-98306713 MsG0580029540.01.T01:three_prime_UTR 50.0%
TGAGTATACTCAGACACCGG+TGG + Chr5:98307475-98307494 None:intergenic 50.0%
TGATTACCATACGCAGCAGC+AGG + Chr5:98308075-98308094 None:intergenic 50.0%
TGCTGCTGCGTATGGTAATC+AGG - Chr5:98308074-98308093 MsG0580029540.01.T01:intron 50.0%
TGGTCCATTGGGGTTGGATA+AGG - Chr5:98307582-98307601 MsG0580029540.01.T01:intron 50.0%
TTCAAACAACGCTGCCGTGT+CGG - Chr5:98306973-98306992 MsG0580029540.01.T01:three_prime_UTR 50.0%
! AAGGAGCTGGATTGGGACTT+GGG - Chr5:98308001-98308020 MsG0580029540.01.T01:intron 50.0%
! AGAGGTGGATGATGGTCCAT+TGG - Chr5:98307570-98307589 MsG0580029540.01.T01:intron 50.0%
! AGGTGGATGATGGTCCATTG+GGG - Chr5:98307572-98307591 MsG0580029540.01.T01:intron 50.0%
! CAAAGATTTTCCGGTGAGCG+GGG + Chr5:98307201-98307220 None:intergenic 50.0%
! GAGGTGGATGATGGTCCATT+GGG - Chr5:98307571-98307590 MsG0580029540.01.T01:intron 50.0%
! GGACTTGGGAATTTGCTTGG+AGG - Chr5:98308015-98308034 MsG0580029540.01.T01:intron 50.0%
! GGGAATTTGCTTGGAGGTCT+TGG - Chr5:98308021-98308040 MsG0580029540.01.T01:intron 50.0%
! TTCTTGTTGGGGTTCGGGTT+CGG + Chr5:98306768-98306787 None:intergenic 50.0%
!! GAAGGCTGTTGATGGTCCTA+AGG - Chr5:98307717-98307736 MsG0580029540.01.T01:three_prime_UTR 50.0%
!! GACGGTTGAGAGTGCTAAGA+AGG - Chr5:98307645-98307664 MsG0580029540.01.T01:three_prime_UTR 50.0%
!! TGAGAGTGCTAAGAAGGCGT+TGG - Chr5:98307651-98307670 MsG0580029540.01.T01:three_prime_UTR 50.0%
!!! AGTGTGGCCACTTTTAGCCT+TGG + Chr5:98310156-98310175 None:intergenic 50.0%
AAGGCGACTGGGAAGCCAAA+GGG - Chr5:98307601-98307620 MsG0580029540.01.T01:three_prime_UTR 55.0%
AAGGTGGAAGCTAACGGTGG+TGG - Chr5:98307007-98307026 MsG0580029540.01.T01:three_prime_UTR 55.0%
AATCCTCAGCTGGGTCAAGG+TGG - Chr5:98308141-98308160 MsG0580029540.01.T01:intron 55.0%
CACTGCATGCAAGTGTACCC+TGG - Chr5:98310195-98310214 MsG0580029540.01.T01:CDS 55.0%
CAGAATCCTCAGCTGGGTCA+AGG - Chr5:98308138-98308157 MsG0580029540.01.T01:intron 55.0%
CAGGGATTGAATCCGGCTCT+TGG - Chr5:98307949-98307968 MsG0580029540.01.T01:intron 55.0%
CATCATCACCATCACGGTGG+TGG - Chr5:98307799-98307818 MsG0580029540.01.T01:intron 55.0%
CGCTCCTTACATGGGTCACT+AGG - Chr5:98308194-98308213 MsG0580029540.01.T01:intron 55.0%
CTATGGGATATGGCCAGCCT+GGG - Chr5:98308100-98308119 MsG0580029540.01.T01:intron 55.0%
CTTCACAGTCTGCTCCGACA+CGG + Chr5:98306990-98307009 None:intergenic 55.0%
CTTGACCCAGCTGAGGATTC+TGG + Chr5:98308140-98308159 None:intergenic 55.0%
GACAAAGCCTGTCCAAGAGC+CGG + Chr5:98307964-98307983 None:intergenic 55.0%
GAGGGCTGGATTTGTGAAGG+TGG + Chr5:98309882-98309901 None:intergenic 55.0%
GCCAACCGCCACATCAAAGA+TGG + Chr5:98310788-98310807 None:intergenic 55.0%
GGAGGACCAGCTTGATTCAC+CGG + Chr5:98308054-98308073 None:intergenic 55.0%
GTCGCCTTATCCAACCCCAA+TGG + Chr5:98307589-98307608 None:intergenic 55.0%
GTGAAGGTGGAAGCTAACGG+TGG - Chr5:98307004-98307023 MsG0580029540.01.T01:three_prime_UTR 55.0%
GTTAGACCTCATCCTGGTCC+CGG - Chr5:98308168-98308187 MsG0580029540.01.T01:intron 55.0%
TAAGGCGACTGGGAAGCCAA+AGG - Chr5:98307600-98307619 MsG0580029540.01.T01:three_prime_UTR 55.0%
TCGCATCATCACCATCACGG+TGG - Chr5:98307796-98307815 MsG0580029540.01.T01:intron 55.0%
TGGGGTTGGATAAGGCGACT+GGG - Chr5:98307590-98307609 MsG0580029540.01.T01:three_prime_UTR 55.0%
TGGGTCACTAGGTGAGTTGC+TGG - Chr5:98308205-98308224 MsG0580029540.01.T01:intron 55.0%
TGGTATTGTGGCTGCAACCC+AGG + Chr5:98308120-98308139 None:intergenic 55.0%
TGTTCGTCAGCTGGCTGATG+TGG - Chr5:98307174-98307193 MsG0580029540.01.T01:intron 55.0%
TTACCATACGCAGCAGCAGG+AGG + Chr5:98308072-98308091 None:intergenic 55.0%
TTGGGGTTGGATAAGGCGAC+TGG - Chr5:98307589-98307608 MsG0580029540.01.T01:three_prime_UTR 55.0%
! CAAGGAGCTGGATTGGGACT+TGG - Chr5:98308000-98308019 MsG0580029540.01.T01:intron 55.0%
! CCCCCCTTGTTGTAACCCTT+AGG + Chr5:98307736-98307755 None:intergenic 55.0%
! GGATGATGGTCCATTGGGGT+TGG - Chr5:98307576-98307595 MsG0580029540.01.T01:intron 55.0%
! GGCGTTGGAAGAGCCGAATA+AGG - Chr5:98307666-98307685 MsG0580029540.01.T01:three_prime_UTR 55.0%
! GGTCACTTGATGGCTCCTAC+TGG - Chr5:98307889-98307908 MsG0580029540.01.T01:intron 55.0%
! GGTGGTGTTAGACCTCATCC+TGG - Chr5:98308162-98308181 MsG0580029540.01.T01:intron 55.0%
! TCGGGTTCGGCTTGTTTGGT+GGG + Chr5:98306755-98306774 None:intergenic 55.0%
! TCGTGTCAATTGGCTTCGGC+TGG - Chr5:98307421-98307440 MsG0580029540.01.T01:intron 55.0%
! TTCGGGTTCGGCTTGTTTGG+TGG + Chr5:98306756-98306775 None:intergenic 55.0%
!! CGGCTTGTTTGGTGGGTTCA+GGG + Chr5:98306748-98306767 None:intergenic 55.0%
!! TCGGCTTGTTTGGTGGGTTC+AGG + Chr5:98306749-98306768 None:intergenic 55.0%
ATGGCTCCTACTGGTCCTGC+TGG - Chr5:98307898-98307917 MsG0580029540.01.T01:intron 60.0%
ATTGTGGCTGCAACCCAGGC+TGG + Chr5:98308116-98308135 None:intergenic 60.0%
CGTGTCGGAGCAGACTGTGA+AGG - Chr5:98306988-98307007 MsG0580029540.01.T01:three_prime_UTR 60.0%
GCATCACCACCCACCAAGTG+TGG + Chr5:98310172-98310191 None:intergenic 60.0%
GCCGGATTCAATCCCTGAGC+CGG + Chr5:98307946-98307965 None:intergenic 60.0%
GCGTTGTAACCACCACCAGC+AGG + Chr5:98307916-98307935 None:intergenic 60.0%
GCTATGGGATATGGCCAGCC+TGG - Chr5:98308099-98308118 MsG0580029540.01.T01:intron 60.0%
GTCGGAGCAGACTGTGAAGG+TGG - Chr5:98306991-98307010 MsG0580029540.01.T01:three_prime_UTR 60.0%
TCAGACACCGGTGGCGCATT+CGG + Chr5:98307466-98307485 None:intergenic 60.0%
TGGTTACAACGCCGGTGTGC+CGG - Chr5:98307924-98307943 MsG0580029540.01.T01:intron 60.0%
! AAGTGGCCACACTTGGTGGG+TGG - Chr5:98310163-98310182 MsG0580029540.01.T01:CDS 60.0%
! AGCATCGGACTGGGTGTCGT+CGG - Chr5:98307356-98307375 MsG0580029540.01.T01:intron 60.0%
! CATCACCATCACGGTGGTGG+TGG - Chr5:98307802-98307821 MsG0580029540.01.T01:intron 60.0%
! GCCGGCTCAGGGATTGAATC+CGG - Chr5:98307942-98307961 MsG0580029540.01.T01:intron 60.0%
! GGGTTCGGGTTCGGCTTGTT+TGG + Chr5:98306759-98306778 None:intergenic 60.0%
!! ACCCATGTAAGGAGCGCCAC+CGG + Chr5:98308190-98308209 None:intergenic 60.0%
!! GCTGGTGGTGGTTACAACGC+CGG - Chr5:98307916-98307935 MsG0580029540.01.T01:intron 60.0%
AGACCTCATCCTGGTCCCGG+TGG - Chr5:98308171-98308190 MsG0580029540.01.T01:intron 65.0%
CAATCCCTGAGCCGGCACAC+CGG + Chr5:98307938-98307957 None:intergenic 65.0%
CCACCACCAGCAGGACCAGT+AGG + Chr5:98307907-98307926 None:intergenic 65.0%
CCACCACCTTGACCCAGCTG+AGG + Chr5:98308147-98308166 None:intergenic 65.0%
CCCGGTGGCGCTCCTTACAT+GGG - Chr5:98308186-98308205 MsG0580029540.01.T01:intron 65.0%
CCTACTGGTCCTGCTGGTGG+TGG - Chr5:98307904-98307923 MsG0580029540.01.T01:intron 65.0%
CCTCAGCTGGGTCAAGGTGG+TGG - Chr5:98308144-98308163 MsG0580029540.01.T01:intron 65.0%
CTGATGTGGACCCCGCTCAC+CGG - Chr5:98307188-98307207 MsG0580029540.01.T01:intron 65.0%
GACCACCACCACCACCGTGA+TGG + Chr5:98307810-98307829 None:intergenic 65.0%
GCTCCTACTGGTCCTGCTGG+TGG - Chr5:98307901-98307920 MsG0580029540.01.T01:intron 65.0%
GGCTTCGGCTGGACCTGTTC+CGG - Chr5:98307432-98307451 MsG0580029540.01.T01:intron 65.0%
GGTCCTCCTGCTGCTGCGTA+TGG - Chr5:98308066-98308085 MsG0580029540.01.T01:intron 65.0%
TCCCGGTGGCGCTCCTTACA+TGG - Chr5:98308185-98308204 MsG0580029540.01.T01:intron 65.0%
TCCTCCACCGAATGCGCCAC+CGG - Chr5:98307456-98307475 MsG0580029540.01.T01:intron 65.0%
TTCGGTGGAGGAGCCGGAAC+AGG + Chr5:98307448-98307467 None:intergenic 65.0%
! GCATCGGACTGGGTGTCGTC+GGG - Chr5:98307357-98307376 MsG0580029540.01.T01:intron 65.0%
! GGTGCGCCGGTGAATCAAGC+TGG - Chr5:98308045-98308064 MsG0580029540.01.T01:intron 65.0%
!! CACCATCACGGTGGTGGTGG+TGG - Chr5:98307805-98307824 MsG0580029540.01.T01:intron 65.0%
!! CCCATGTAAGGAGCGCCACC+GGG + Chr5:98308189-98308208 None:intergenic 65.0%
!! GGTGGTGGTGGCCCATCACA+CGG - Chr5:98307865-98307884 MsG0580029540.01.T01:intron 65.0%
!! TGGAGGTCTTGGTGGTGCGC+CGG - Chr5:98308032-98308051 MsG0580029540.01.T01:intron 65.0%
GACACCGGTGGCGCATTCGG+TGG + Chr5:98307463-98307482 None:intergenic 70.0%
! ACCGGTGGCGCATTCGGTGG+AGG + Chr5:98307460-98307479 None:intergenic 70.0%
! GGCGCATTCGGTGGAGGAGC+CGG + Chr5:98307454-98307473 None:intergenic 70.0%
! GGTGGTGGCCCATCACACGG+TGG - Chr5:98307868-98307887 MsG0580029540.01.T01:intron 70.0%
!! AACGCCGGTGTGCCGGCTCA+GGG - Chr5:98307931-98307950 MsG0580029540.01.T01:intron 70.0%
!! TAAGGAGCGCCACCGGGACC+AGG + Chr5:98308183-98308202 None:intergenic 70.0%
GCGCCACCGGGACCAGGATG+AGG + Chr5:98308177-98308196 None:intergenic 75.0%
!! CAACGCCGGTGTGCCGGCTC+AGG - Chr5:98307930-98307949 MsG0580029540.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 98306609 98311227 98306609 ID=MsG0580029540.01;Name=MsG0580029540.01
Chr5 mRNA 98306609 98311227 98306609 ID=MsG0580029540.01.T01;Parent=MsG0580029540.01;Name=MsG0580029540.01.T01;_AED=0.45;_eAED=0.45;_QI=104|1|1|1|0|0.33|3|668|500
Chr5 exon 98306609 98307095 98306609 ID=MsG0580029540.01.T01:exon:25673;Parent=MsG0580029540.01.T01
Chr5 exon 98307589 98307769 98307589 ID=MsG0580029540.01.T01:exon:25672;Parent=MsG0580029540.01.T01
Chr5 exon 98309621 98311227 98309621 ID=MsG0580029540.01.T01:exon:25671;Parent=MsG0580029540.01.T01
Chr5 five_prime_UTR 98311124 98311227 98311124 ID=MsG0580029540.01.T01:five_prime_utr;Parent=MsG0580029540.01.T01
Chr5 CDS 98309621 98311123 98309621 ID=MsG0580029540.01.T01:cds;Parent=MsG0580029540.01.T01
Chr5 three_prime_UTR 98307589 98307769 98307589 ID=MsG0580029540.01.T01:three_prime_utr;Parent=MsG0580029540.01.T01
Chr5 three_prime_UTR 98306609 98307095 98306609 ID=MsG0580029540.01.T01:three_prime_utr;Parent=MsG0580029540.01.T01
Gene Sequence

>MsG0580029540.01.T01

ATGGCCAAGAAACGAAAGCTTCGATCTTCTGACCCTGAACCCACCAAACAAGCCGAACCCGAACCCCAACAAGAAGAAGTAGCCGAAGAAGAACCAACAACACAAGAAGAAGAAATCACACCGATTGAAGAAGATCAACCTCAAAACGAAGGAGAAGGTGAAGAAGAGCAAGAAGAGGAGGTTGCAGAAGATGAAGAGGATGATCAACAAGGAGAAGACGAAACCCTAGAAAATCAACAACAAGAGGGTGGCGGTGAAGCTTCAAACAACGCTGCCGTGTCGGAGCAGACTGTGAAGGTGGAAGCTAACGGTGGTGGTGAGAACAATAACAACGAAGAACAAGAGGAAGATCTTGAATTGGAAGATGAGCCTGTTGAGAAGCTTCTAGAACCATTCACGAAGGAGCAATTACACGTGCTTGTGAAGCAAGCGGTTGAGAAGTATCCAGATCTGTCTGAGAATGTTCGTCAGCTGGCTGATGTGGACCCCGCTCACCGGAAAATCTTTGTTCATGGTCTTGGTTGGGATGCTACTGCTGAAACGCTAACCACCACGTTTTCGAAGTACGGTGAAATTGAAGATTGTAAGGCTGTGACTGATAAGAATTCTGGAAAATCGAAAGGTTATGCTTTTATTTTGTTTAAGCATCGGACTGGGTGTCGTCGGGCGTTAAAGCAGCCGCAGAAAGTGATTGGGAATAGGACTACATCGTGTCAATTGGCTTCGGCTGGACCTGTTCCGGCTCCTCCACCGAATGCGCCACCGGTGTCTGAGTATACTCAAAGGAAGATTTTTGTGAGTAATGTGAGTTCTGATATTGATCCTCAGAAGCTGCTTGAGTTTTTCAAGCAGTTTGGAGAGGTGGATGATGGTCCATTGGGGTTGGATAAGGCGACTGGGAAGCCAAAGGGTTTTGCGCTGTTTGTTTATAAGACGGTTGAGAGTGCTAAGAAGGCGTTGGAAGAGCCGAATAAGGTGTTTGAGGGGCATACTTTGTATTGTCAGAAGGCTGTTGATGGTCCTAAGGGTTACAACAAGGGGGGTCATTTTCAGCAGCAGCAACATCATCATCAGCCGCATCATTCGCATCATCACCATCACGGTGGTGGTGGTGGTCACTACAATCCAAGGAAAGAAAAGAAGTATTCACATGGTGGTGGTGGCCCATCACACGGTGGTCACTTGATGGCTCCTACTGGTCCTGCTGGTGGTGGTTACAACGCCGGTGTGCCGGCTCAGGGATTGAATCCGGCTCTTGGACAGGCTTTGTCTGCTTTGCTTGCTAATCAAGGAGCTGGATTGGGACTTGGGAATTTGCTTGGAGGTCTTGGTGGTGCGCCGGTGAATCAAGCTGGTCCTCCTGCTGCTGCGTATGGTAATCAGGCTGCTATGGGATATGGCCAGCCTGGGTTGCAGCCACAATACCAGAATCCTCAGCTGGGTCAAGGTGGTGGTGTTAGACCTCATCCTGGTCCCGGTGGCGCTCCTTACATGGGTCACTAG
Protein sequence

>MsG0580029540.01.T01

MAKKRKLRSSDPEPTKQAEPEPQQEEVAEEEPTTQEEEITPIEEDQPQNEGEGEEEQEEEVAEDEEDDQQGEDETLENQQQEGGGEASNNAAVSEQTVKVEANGGGENNNNEEQEEDLELEDEPVEKLLEPFTKEQLHVLVKQAVEKYPDLSENVRQLADVDPAHRKIFVHGLGWDATAETLTTTFSKYGEIEDCKAVTDKNSGKSKGYAFILFKHRTGCRRALKQPQKVIGNRTTSCQLASAGPVPAPPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQFGEVDDGPLGLDKATGKPKGFALFVYKTVESAKKALEEPNKVFEGHTLYCQKAVDGPKGYNKGGHFQQQQHHHQPHHSHHHHHGGGGGHYNPRKEKKYSHGGGGPSHGGHLMAPTGPAGGGYNAGVPAQGLNPALGQALSALLANQGAGLGLGNLLGGLGGAPVNQAGPPAAAYGNQAAMGYGQPGLQPQYQNPQLGQGGGVRPHPGPGGAPYMGH*