AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040742.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040742.01.T01 MTR_7g096940 94.206 535 3 1 14 548 5 511 0.0 1028
MsG0780040742.01.T01 MTR_1g085510 75.192 391 79 4 14 401 12 387 0.0 547
MsG0780040742.01.T01 MTR_1g076120 71.429 119 34 0 70 188 11 129 8.31e-55 184
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040742.01.T01 AT1G65660 77.778 540 90 2 14 551 5 516 0.0 851
MsG0780040742.01.T01 AT4G37120 73.889 540 111 2 14 551 5 516 0.0 808
MsG0780040742.01.T01 AT3G45950 71.191 361 94 3 14 373 5 356 0.0 526

Find 143 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAGATGAAGATGATTTA+AGG 0.203780 7:+81848642 MsG0780040742.01.T01:CDS
TAGCATAAAGTCATTTATTC+TGG 0.247691 7:+81850761 MsG0780040742.01.T01:intron
ATGCACCTTTCCTATACTTC+TGG 0.255412 7:-81847497 None:intergenic
CTTGACCACTACTTCTATAT+TGG 0.255478 7:-81849138 None:intergenic
TTGCAGCACCCTCATCATTT+TGG 0.262971 7:-81848610 None:intergenic
ATGACATATACTGAGGAATA+TGG 0.265173 7:-81846571 None:intergenic
TTCACGCATGGACCTGGTCT+TGG 0.298183 7:-81848957 None:intergenic
TCATCCAGAACTACGTCTTC+TGG 0.306664 7:-81850435 None:intergenic
TCACGCATGGACCTGGTCTT+GGG 0.314163 7:-81848956 None:intergenic
CAACAACCACACAACTGTTT+GGG 0.317766 7:+81850047 MsG0780040742.01.T01:CDS
ACTTCCAAGAGAACTTCTTC+TGG 0.324372 7:+81849351 MsG0780040742.01.T01:CDS
GCTTGCCGATGCACTCAAAA+AGG 0.330113 7:+81850464 MsG0780040742.01.T01:CDS
ATCCTCTTCATACTTGCTTC+TGG 0.330708 7:-81850016 None:intergenic
TCAACAACCACACAACTGTT+TGG 0.359011 7:+81850046 MsG0780040742.01.T01:CDS
TGCACCTTTCCTATACTTCT+GGG 0.379997 7:-81847496 None:intergenic
TCCTCTTCATACTTGCTTCT+GGG 0.380155 7:-81850015 None:intergenic
GGAACAACAGCTGAAGAGAT+TGG 0.387586 7:+81848577 MsG0780040742.01.T01:CDS
GACACTATTATTGAGAAGTA+TGG 0.392536 7:+81849307 MsG0780040742.01.T01:CDS
GAGAAGCGTGTGCGAACAAC+AGG 0.403536 7:+81848716 MsG0780040742.01.T01:CDS
GTTTGAAACATCAAAGGAAA+TGG 0.413225 7:+81847415 MsG0780040742.01.T01:CDS
TGGTCAAGCTTTGGAATTCA+AGG 0.415510 7:+81849153 MsG0780040742.01.T01:CDS
TAGAAGTAGTGGTCAAGCTT+TGG 0.419742 7:+81849144 MsG0780040742.01.T01:CDS
TCGTGCTGGTAGAATTGTTA+AGG 0.421506 7:+81849402 MsG0780040742.01.T01:CDS
TCCCTTGTCAAATGCTTCCC+AGG 0.423430 7:-81849191 None:intergenic
TGAAGATGAAGATGATTTAA+GGG 0.430484 7:+81848643 MsG0780040742.01.T01:CDS
ATTACTCTATAAGAATTTCA+AGG 0.432870 7:+81849252 MsG0780040742.01.T01:CDS
TGTTCCAGAAGACGTAGTTC+TGG 0.437289 7:+81850431 MsG0780040742.01.T01:CDS
ATGTTAATGAAATTTGTATT+CGG 0.437538 7:+81846429 MsG0780040742.01.T01:CDS
CTCAAGCTGCCAAGAGGAAT+GGG 0.438846 7:+81851148 MsG0780040742.01.T01:intron
TGACATATACTGAGGAATAT+GGG 0.442110 7:-81846570 None:intergenic
CTTATAGAGTAATTCAGCTT+GGG 0.445002 7:-81849242 None:intergenic
AGCTTGACTATGATGGCAAA+CGG 0.446023 7:+81848465 MsG0780040742.01.T01:CDS
CTTCCAAGAGAACTTCTTCT+GGG 0.446100 7:+81849352 MsG0780040742.01.T01:CDS
CGCTCGAAAGAAGTTCTTGA+AGG 0.450188 7:+81848556 MsG0780040742.01.T01:CDS
AACCTCAGCAGGTGCAAGTC+CGG 0.450714 7:-81846522 None:intergenic
TTTGGATCTGCCTCTGGAAG+AGG 0.454768 7:-81848983 None:intergenic
TGACCCAGAAGAAGTTCTCT+TGG 0.456809 7:-81849355 None:intergenic
CTTCTTTCGAGCGTCGTCTC+GGG 0.457445 7:-81848546 None:intergenic
AGCTATTGCACTGGTGCTGC+TGG 0.461250 7:+81850129 MsG0780040742.01.T01:CDS
CACTGGTGCTGCTGGTATTG+AGG 0.461483 7:+81850137 MsG0780040742.01.T01:CDS
TGGTCTTTCCATGCATGCCT+TGG 0.468273 7:-81848378 None:intergenic
GATATTCATGTGCGTTGTAC+TGG 0.470598 7:+81850815 MsG0780040742.01.T01:CDS
TGGATATTTGAATCTGTTTG+AGG 0.477037 7:+81850781 MsG0780040742.01.T01:CDS
GCACATTGCTGCTGATGAAA+AGG 0.477662 7:+81848430 MsG0780040742.01.T01:CDS
ACTTCTTTCGAGCGTCGTCT+CGG 0.480273 7:-81848547 None:intergenic
CTAAACCAATAGAAGAGAAA+AGG 0.482314 7:+81850388 MsG0780040742.01.T01:CDS
GAAATTGAAGTCTCAAACAA+AGG 0.483456 7:+81849285 MsG0780040742.01.T01:CDS
AGAGAAAAGGCCTGCTACAT+GGG 0.485089 7:+81850401 MsG0780040742.01.T01:CDS
CCATCTTCATCAACCTCAGC+AGG 0.485535 7:-81846533 None:intergenic
ATTGAGGCTGCTGAGGCTGC+AGG 0.490119 7:+81850153 MsG0780040742.01.T01:CDS
TGCTTTGCTCCTACTTTCCG+TGG 0.491979 7:-81848398 None:intergenic
AGGACTTAAACATCCATGCC+TGG 0.493322 7:+81849173 MsG0780040742.01.T01:CDS
ACACAACTGTTTGGGGCTCA+TGG 0.494810 7:+81850055 MsG0780040742.01.T01:CDS
TTGCAGTGGCATTCAAGTCC+AGG 0.496260 7:+81846456 MsG0780040742.01.T01:CDS
TCTTATAGAGTAATTCAGCT+TGG 0.499036 7:-81849243 None:intergenic
TACACTCTGCCCATTCCTCT+TGG 0.502379 7:-81851157 None:intergenic
ACATCAGTTCCCCATGTAGC+AGG 0.504075 7:-81850411 None:intergenic
AAGAGAAAAGGCCTGCTACA+TGG 0.505586 7:+81850400 MsG0780040742.01.T01:CDS
ACAACAGGCGGTGGGAGTAC+AGG 0.505697 7:+81848731 MsG0780040742.01.T01:CDS
GCACGTAAGGAGTCTGCTGC+AGG 0.507882 7:+81850198 MsG0780040742.01.T01:CDS
TACCATGATGTGGTGTAGTT+GGG 0.511009 7:-81847447 None:intergenic
TGCTGGTATTGAGGCTGCTG+AGG 0.513900 7:+81850146 MsG0780040742.01.T01:CDS
TCTCAAGCTGCCAAGAGGAA+TGG 0.516628 7:+81851147 MsG0780040742.01.T01:intron
TTAATGAAATTTGTATTCGG+TGG 0.516655 7:+81846432 MsG0780040742.01.T01:CDS
ACCACATCATGGTACGATAG+AGG 0.520950 7:+81847456 MsG0780040742.01.T01:CDS
CTTGAGGAAGCTCGTAAAGC+CGG 0.521296 7:+81846503 MsG0780040742.01.T01:CDS
AGGATCTTCACGCATGGACC+TGG 0.521551 7:-81848963 None:intergenic
CGTGCTGGTAGAATTGTTAA+GGG 0.521936 7:+81849403 MsG0780040742.01.T01:CDS
TGTCAAATGCTTCCCAGGCA+TGG 0.522883 7:-81849186 None:intergenic
TAATGTCAGATGGAATGATC+AGG 0.524179 7:+81850895 MsG0780040742.01.T01:CDS
GAGAGCTAATATTGCACGTA+AGG 0.524660 7:+81850185 MsG0780040742.01.T01:CDS
ACATAATGCCAAGGCATGCA+TGG 0.526072 7:+81848370 MsG0780040742.01.T01:CDS
TGGTAGAATTGTTAAGGGAC+AGG 0.528512 7:+81849408 MsG0780040742.01.T01:CDS
CCTCTTCATACTTGCTTCTG+GGG 0.531693 7:-81850014 None:intergenic
TTCTTCTGGGTCAGAGTGAG+AGG 0.533851 7:+81849365 MsG0780040742.01.T01:CDS
GCTTGACTATGATGGCAAAC+GGG 0.536202 7:+81848466 MsG0780040742.01.T01:CDS
AGCGTAAATATAATGTCAGA+TGG 0.536290 7:+81850885 MsG0780040742.01.T01:CDS
GTACCATGATGTGGTGTAGT+TGG 0.538558 7:-81847448 None:intergenic
CACGCATGGACCTGGTCTTG+GGG 0.541517 7:-81848955 None:intergenic
AGTATATGTCATCTGCGCCT+TGG 0.542347 7:+81846582 MsG0780040742.01.T01:CDS
ATGATGGCAAACGGGACAGA+TGG 0.550124 7:+81848474 MsG0780040742.01.T01:CDS
TCGAAAACAGATTGAGCTTG+AGG 0.551968 7:+81846487 MsG0780040742.01.T01:CDS
GGTTGATGAAAGCAAACAGA+TGG 0.552756 7:+81848679 MsG0780040742.01.T01:CDS
CACATTATGACCCCAAGACC+AGG 0.553071 7:+81848945 MsG0780040742.01.T01:CDS
TAAGAATTTCAAGGTCATGA+AGG 0.554860 7:+81849261 MsG0780040742.01.T01:CDS
TCAGATGGAATGATCAGGTA+TGG 0.555583 7:+81850900 MsG0780040742.01.T01:CDS
TGCAGCATTTAAAACCCCAC+TGG 0.564956 7:-81850089 None:intergenic
CAAGTTGAGTATGATCGTGC+TGG 0.565861 7:+81849388 MsG0780040742.01.T01:CDS
ATGGAAAGACCACGGAAAGT+AGG 0.568977 7:+81848389 MsG0780040742.01.T01:CDS
CCTGCTGAGGTTGATGAAGA+TGG 0.573554 7:+81846533 MsG0780040742.01.T01:CDS
CAGCTGAAGAGATTGGAGAA+GGG 0.574722 7:+81848584 MsG0780040742.01.T01:CDS
AGCCGGACTTGCACCTGCTG+AGG 0.576370 7:+81846520 MsG0780040742.01.T01:CDS
CGTGTGCGAACAACAGGCGG+TGG 0.578917 7:+81848722 MsG0780040742.01.T01:CDS
TGGAAGAGGATCTTCACGCA+TGG 0.581895 7:-81848969 None:intergenic
GATAACCAATATAGAAGTAG+TGG 0.583553 7:+81849133 MsG0780040742.01.T01:CDS
TGTAGAGTTTGAAACATCAA+AGG 0.584746 7:+81847409 MsG0780040742.01.T01:intron
ACAGCTGAAGAGATTGGAGA+AGG 0.585982 7:+81848583 MsG0780040742.01.T01:CDS
GGCAAACGGGACAGATGGAA+TGG 0.586064 7:+81848479 MsG0780040742.01.T01:CDS
CCCCAGAAGCAAGTATGAAG+AGG 0.586559 7:+81850014 MsG0780040742.01.T01:CDS
GGACTTAAACATCCATGCCT+GGG 0.588939 7:+81849174 MsG0780040742.01.T01:CDS
TGTTTGGGGCTCATGGTGGA+AGG 0.589122 7:+81850062 MsG0780040742.01.T01:CDS
TTGTATTCGGTGGATTGCAG+TGG 0.591267 7:+81846442 MsG0780040742.01.T01:CDS
ATCCCAACTACACCACATCA+TGG 0.592083 7:+81847445 MsG0780040742.01.T01:CDS
TAGAGTAATTCAGCTTGGGA+AGG 0.595348 7:-81849238 None:intergenic
AGAGAGAAGAGAAAGATGAG+AGG 0.596130 7:+81850861 MsG0780040742.01.T01:CDS
ACCTCTATCGTACCATGATG+TGG 0.597844 7:-81847457 None:intergenic
ATACGTAATAGCTATTGCAC+TGG 0.600890 7:+81850120 MsG0780040742.01.T01:CDS
CAAACAGATGGACTTTGCAA+AGG 0.601027 7:+81848691 MsG0780040742.01.T01:CDS
TGCAGTGGCATTCAAGTCCA+GGG 0.602123 7:+81846457 MsG0780040742.01.T01:CDS
GACATATACTGAGGAATATG+GGG 0.605217 7:-81846569 None:intergenic
GAAGGGCGACCAAAATGATG+AGG 0.610286 7:+81848601 MsG0780040742.01.T01:CDS
ATGGTGGAAGGATCACCAGT+GGG 0.611827 7:+81850074 MsG0780040742.01.T01:CDS
GTATGGCAATGCAGCTGACG+AGG 0.612655 7:+81849324 MsG0780040742.01.T01:CDS
CTCTCGGCATTAAGATACCA+AGG 0.616262 7:-81846599 None:intergenic
GTGTATGATTAGCGAGAAAG+CGG 0.617155 7:+81851175 MsG0780040742.01.T01:CDS
GTGTGCGAACAACAGGCGGT+GGG 0.617858 7:+81848723 MsG0780040742.01.T01:CDS
AACAACCACACAACTGTTTG+GGG 0.618191 7:+81850048 MsG0780040742.01.T01:CDS
CAGGCCCAGAAGTATAGGAA+AGG 0.625900 7:+81847492 MsG0780040742.01.T01:CDS
AGCTATGACACATAATGCCA+AGG 0.626277 7:+81848361 MsG0780040742.01.T01:CDS
TTTAAGGGTAGACGAGGCAA+AGG 0.628328 7:+81848658 MsG0780040742.01.T01:CDS
TGTATGATTAGCGAGAAAGC+GGG 0.636814 7:+81851176 MsG0780040742.01.T01:CDS
AGCGAGAAAGCGGGACAGAG+TGG 0.637562 7:+81851185 MsG0780040742.01.T01:CDS
CAACTGTTTGGGGCTCATGG+TGG 0.640882 7:+81850058 MsG0780040742.01.T01:CDS
GAGAAAAGGCCTGCTACATG+GGG 0.647269 7:+81850402 MsG0780040742.01.T01:CDS
TGCCTGGGAAGCATTTGACA+AGG 0.649459 7:+81849189 MsG0780040742.01.T01:CDS
AAGCGTGTGCGAACAACAGG+CGG 0.649651 7:+81848719 MsG0780040742.01.T01:CDS
TGAGGTTGATGAAGATGGCA+AGG 0.654532 7:+81846538 MsG0780040742.01.T01:CDS
GATGTTCTCAAGCTGCCAAG+AGG 0.658614 7:+81851142 MsG0780040742.01.T01:intron
CAGTATCCTCTCGAATACGT+AGG 0.658694 7:-81848889 None:intergenic
AAGGGCGACCAAAATGATGA+GGG 0.664419 7:+81848602 MsG0780040742.01.T01:CDS
GCGTGAAGATCCTCTTCCAG+AGG 0.666737 7:+81848973 MsG0780040742.01.T01:CDS
ACAAGATGTTCACATGCAAG+CGG 0.667127 7:+81849213 MsG0780040742.01.T01:CDS
CAGGAACCTACGTATTCGAG+AGG 0.670022 7:+81848883 MsG0780040742.01.T01:intron
GCCTGGGAAGCATTTGACAA+GGG 0.670926 7:+81849190 MsG0780040742.01.T01:CDS
AGGCATGCATGGAAAGACCA+CGG 0.681793 7:+81848381 MsG0780040742.01.T01:CDS
AGATGATTTAAGGGTAGACG+AGG 0.685583 7:+81848652 MsG0780040742.01.T01:CDS
CATGGTGGAAGGATCACCAG+TGG 0.686577 7:+81850073 MsG0780040742.01.T01:CDS
TGAGGGTGCTGCAATTGATG+AGG 0.706358 7:+81848619 MsG0780040742.01.T01:CDS
GGCGCAGATGACATATACTG+AGG 0.723810 7:-81846578 None:intergenic
TGGTGGAAGGATCACCAGTG+GGG 0.729242 7:+81850075 MsG0780040742.01.T01:CDS
ATGAGCCCCAAACAGTTGTG+TGG 0.736062 7:-81850053 None:intergenic
GTGGGAGTACAGGAACTGTG+AGG 0.740528 7:+81848741 MsG0780040742.01.T01:CDS
AGTGGCATTCAAGTCCAGGG+AGG 0.776072 7:+81846460 MsG0780040742.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAATTTAGTTAATGTA+GGG + Chr7:81847943-81847962 MsG0780040742.01.T01:intron 10.0%
!! TCATTTAAAAAAAAAATTGA+AGG - Chr7:81849785-81849804 None:intergenic 10.0%
!! TTAATTAATTTAGTTAATGT+AGG + Chr7:81847942-81847961 MsG0780040742.01.T01:intron 10.0%
!! AAGAGTAAAAAAAATATATG+TGG - Chr7:81850507-81850526 None:intergenic 15.0%
!! ACAAAATAAAATCTAGTATT+TGG + Chr7:81847619-81847638 MsG0780040742.01.T01:intron 15.0%
!! ATGTTAATGAAATTTGTATT+CGG + Chr7:81846429-81846448 MsG0780040742.01.T01:CDS 15.0%
!! TAAAAAAAAAATTGAAGGTA+CGG - Chr7:81849780-81849799 None:intergenic 15.0%
!!! GTTTTTGTTTTTATTTTGTA+GGG + Chr7:81849109-81849128 MsG0780040742.01.T01:intron 15.0%
!!! TGTTTTTGTTTTTATTTTGT+AGG + Chr7:81849108-81849127 MsG0780040742.01.T01:intron 15.0%
!! AAATAGTAAAAAAATGTGTC+AGG - Chr7:81849669-81849688 None:intergenic 20.0%
!! AATATGACAATTATCAATTG+TGG - Chr7:81847343-81847362 None:intergenic 20.0%
!! ACTAATAAAGGAAAGTAATA+TGG - Chr7:81846648-81846667 None:intergenic 20.0%
!! ATTACTCTATAAGAATTTCA+AGG + Chr7:81849252-81849271 MsG0780040742.01.T01:CDS 20.0%
!! GAACTGATAATTGTAATTAA+CGG - Chr7:81848817-81848836 None:intergenic 20.0%
!! TACAAGATAATATTATTGCA+AGG + Chr7:81847993-81848012 MsG0780040742.01.T01:intron 20.0%
!! TCATCTCAAAAAACTAATAA+AGG - Chr7:81846660-81846679 None:intergenic 20.0%
!!! AAAAAAAAAATTGAAGGTAC+GGG - Chr7:81849779-81849798 None:intergenic 20.0%
!!! CAATATTTAGTTTGAATCAA+TGG - Chr7:81850698-81850717 None:intergenic 20.0%
!!! CTTCTTTTATGTTTGATAAT+TGG + Chr7:81850289-81850308 MsG0780040742.01.T01:intron 20.0%
!!! TCTTCAATAATAGTTTTTCT+AGG - Chr7:81846799-81846818 None:intergenic 20.0%
! AAACGATTTAAAAATCTGCA+AGG - Chr7:81850973-81850992 None:intergenic 25.0%
! AAACTATTAAGAAGATCTAG+AGG - Chr7:81847111-81847130 None:intergenic 25.0%
! AATAAAGGAAAGTAATATGG+AGG - Chr7:81846645-81846664 None:intergenic 25.0%
! AATAGAACTCATTAACATCA+AGG - Chr7:81850590-81850609 None:intergenic 25.0%
! ACTATATAACAAAACTGTCA+AGG + Chr7:81848210-81848229 MsG0780040742.01.T01:intron 25.0%
! ATAATAATTAACTCCACAGA+AGG - Chr7:81850630-81850649 None:intergenic 25.0%
! GTAAATATATCTTAACCTTC+AGG + Chr7:81848864-81848883 MsG0780040742.01.T01:intron 25.0%
! GTTTCAAACTCTACATTTAA+AGG - Chr7:81847404-81847423 None:intergenic 25.0%
! TAGAATTGAACGAAAATCAA+TGG - Chr7:81849912-81849931 None:intergenic 25.0%
! TAGCATAAAGTCATTTATTC+TGG + Chr7:81850761-81850780 MsG0780040742.01.T01:intron 25.0%
! TGAAGATGAAGATGATTTAA+GGG + Chr7:81848643-81848662 MsG0780040742.01.T01:CDS 25.0%
! TGCAAAATATTGTGAAATAG+TGG + Chr7:81847220-81847239 MsG0780040742.01.T01:intron 25.0%
! TTAATAACAAAGAGAAGAGA+AGG - Chr7:81850266-81850285 None:intergenic 25.0%
! TTAATGAAATTTGTATTCGG+TGG + Chr7:81846432-81846451 MsG0780040742.01.T01:CDS 25.0%
! TTCAGGAAAAATTCTTCATT+GGG - Chr7:81851061-81851080 None:intergenic 25.0%
!! ACCAAGTAAAACTTTTCATT+TGG - Chr7:81849004-81849023 None:intergenic 25.0%
!! ATTCTAAGCATTATGCTTTT+AGG + Chr7:81849926-81849945 MsG0780040742.01.T01:intron 25.0%
!! ATTTATCTGTTGCTTCTAAT+AGG + Chr7:81849981-81850000 MsG0780040742.01.T01:intron 25.0%
!! CATATTTGGTTTATAAGTAC+TGG + Chr7:81847913-81847932 MsG0780040742.01.T01:intron 25.0%
!! CTACTTAATATTTGTTGAGA+CGG - Chr7:81848276-81848295 None:intergenic 25.0%
!! TCCAAATGAAAAGTTTTACT+TGG + Chr7:81849000-81849019 MsG0780040742.01.T01:CDS 25.0%
!! TTTATGTTTGATAATTGGTG+TGG + Chr7:81850294-81850313 MsG0780040742.01.T01:intron 25.0%
!!! ACTGATTTTGTTGGATATAT+GGG + Chr7:81847852-81847871 MsG0780040742.01.T01:intron 25.0%
!!! AGTAAGAAGCTTTAAAGTAT+GGG - Chr7:81849542-81849561 None:intergenic 25.0%
!!! TAAATCGTTTTAATCCAAAC+AGG + Chr7:81850983-81851002 MsG0780040742.01.T01:intron 25.0%
AAAATTATCAACCAGTGACA+TGG - Chr7:81850932-81850951 None:intergenic 30.0%
AATAACAACAACAACAACCA+AGG - Chr7:81846917-81846936 None:intergenic 30.0%
AATATATGTTGAGACAAGCA+AGG + Chr7:81848114-81848133 MsG0780040742.01.T01:intron 30.0%
AATATATGTTGAGACAAGCA+AGG - Chr7:81848133-81848114 None:intergenic 30.0%
AATTATCAATTGTGGATCAC+AGG - Chr7:81847290-81847309 None:intergenic 30.0%
AGATCTAGAGATTAATGAGT+TGG + Chr7:81846816-81846835 MsG0780040742.01.T01:intron 30.0%
AGCGTAAATATAATGTCAGA+TGG + Chr7:81850885-81850904 MsG0780040742.01.T01:CDS 30.0%
ATAATATTATTGCAAGGCGA+AGG + Chr7:81847999-81848018 MsG0780040742.01.T01:intron 30.0%
ATCCAACAAAATCAGTCAAA+AGG - Chr7:81847848-81847867 None:intergenic 30.0%
ATGACATATACTGAGGAATA+TGG - Chr7:81846574-81846593 None:intergenic 30.0%
CAAAAACCATGTATTAATCC+AGG - Chr7:81847814-81847833 None:intergenic 30.0%
CACATGACAATTATCAATTG+TGG - Chr7:81847298-81847317 None:intergenic 30.0%
CTAAACCAATAGAAGAGAAA+AGG + Chr7:81850388-81850407 MsG0780040742.01.T01:CDS 30.0%
CTGAAGATGAAGATGATTTA+AGG + Chr7:81848642-81848661 MsG0780040742.01.T01:CDS 30.0%
CTTATAGAGTAATTCAGCTT+GGG - Chr7:81849245-81849264 None:intergenic 30.0%
GAAATTGAAGTCTCAAACAA+AGG + Chr7:81849285-81849304 MsG0780040742.01.T01:CDS 30.0%
GACACTATTATTGAGAAGTA+TGG + Chr7:81849307-81849326 MsG0780040742.01.T01:CDS 30.0%
GAGTAAAAATATATACCCAG+AGG - Chr7:81850558-81850577 None:intergenic 30.0%
GATAACCAATATAGAAGTAG+TGG + Chr7:81849133-81849152 MsG0780040742.01.T01:CDS 30.0%
GCGTGTTAATCTTTGTATTT+GGG + Chr7:81849077-81849096 MsG0780040742.01.T01:intron 30.0%
GTTCAGGAAAAATTCTTCAT+TGG - Chr7:81851062-81851081 None:intergenic 30.0%
TAAAAATATATACCCAGAGG+AGG - Chr7:81850555-81850574 None:intergenic 30.0%
TAAGAATTTCAAGGTCATGA+AGG + Chr7:81849261-81849280 MsG0780040742.01.T01:CDS 30.0%
TAATATTATTGCAAGGCGAA+GGG + Chr7:81848000-81848019 MsG0780040742.01.T01:intron 30.0%
TCTTATAGAGTAATTCAGCT+TGG - Chr7:81849246-81849265 None:intergenic 30.0%
TGACATATACTGAGGAATAT+GGG - Chr7:81846573-81846592 None:intergenic 30.0%
TGCGTGTTAATCTTTGTATT+TGG + Chr7:81849076-81849095 MsG0780040742.01.T01:intron 30.0%
TGGATATTTGAATCTGTTTG+AGG + Chr7:81850781-81850800 MsG0780040742.01.T01:CDS 30.0%
TTATAGAGTTGGAATGAGAA+TGG + Chr7:81848081-81848100 MsG0780040742.01.T01:intron 30.0%
! ACCGCAAATTTAACTTCAAA+CGG - Chr7:81849581-81849600 None:intergenic 30.0%
! ATTTTCTTGAATCTGTACAG+AGG + Chr7:81850362-81850381 MsG0780040742.01.T01:intron 30.0%
! CATTTGCTTTGTTATAGAGT+TGG + Chr7:81848070-81848089 MsG0780040742.01.T01:intron 30.0%
! GTTTGAAACATCAAAGGAAA+TGG + Chr7:81847415-81847434 MsG0780040742.01.T01:CDS 30.0%
! TATGGGTTGAATTGCATATT+AGG + Chr7:81847869-81847888 MsG0780040742.01.T01:intron 30.0%
! TCATCTTCTTTTTATAGCTG+CGG + Chr7:81848338-81848357 MsG0780040742.01.T01:intron 30.0%
! TCCGTTTGAAGTTAAATTTG+CGG + Chr7:81849577-81849596 MsG0780040742.01.T01:intron 30.0%
! TGACTAGACCTTGATAATTA+AGG - Chr7:81850675-81850694 None:intergenic 30.0%
! TGTAGAGTTTGAAACATCAA+AGG + Chr7:81847409-81847428 MsG0780040742.01.T01:intron 30.0%
! TTTTCTTATTCTACCTTCTG+TGG + Chr7:81850614-81850633 MsG0780040742.01.T01:intron 30.0%
!! GACTGATTTTGTTGGATATA+TGG + Chr7:81847851-81847870 MsG0780040742.01.T01:intron 30.0%
!! GAGTAAGAAGCTTTAAAGTA+TGG - Chr7:81849543-81849562 None:intergenic 30.0%
!! TGTATTTTTCGATGTGTTAG+TGG + Chr7:81847652-81847671 MsG0780040742.01.T01:intron 30.0%
!! TTGACAATTCAAGTTTGCTA+AGG - Chr7:81848175-81848194 None:intergenic 30.0%
!!! ATGATTTGCTCTTTTCATCA+AGG + Chr7:81849881-81849900 MsG0780040742.01.T01:intron 30.0%
!!! CTTTTCTCTTCTATTGGTTT+AGG - Chr7:81850390-81850409 None:intergenic 30.0%
!!! GTTTCTCTTCTAGTTTTTCT+AGG + Chr7:81847127-81847146 MsG0780040742.01.T01:intron 30.0%
!!! TATTACCTTTTTGAGTGCAT+CGG - Chr7:81850472-81850491 None:intergenic 30.0%
!!! TTTTTTGAGATGAGAGAGTT+GGG + Chr7:81846667-81846686 MsG0780040742.01.T01:intron 30.0%
AAACTAGGCTTAAGTGGTTT+GGG + Chr7:81846717-81846736 MsG0780040742.01.T01:intron 35.0%
AATAGCATATCGCAGAACAA+CGG - Chr7:81847197-81847216 None:intergenic 35.0%
ACAAAGAAGCAATGATGCAT+AGG - Chr7:81849843-81849862 None:intergenic 35.0%
ACCTATAGTAGAAAAGATGG+TGG + Chr7:81846694-81846713 MsG0780040742.01.T01:intron 35.0%
AGATCTAGAGGTTAATGAGT+TGG - Chr7:81847099-81847118 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGA+TGG + Chr7:81846691-81846710 MsG0780040742.01.T01:intron 35.0%
ATAACAAAGAGAAGAGAAGG+AGG - Chr7:81850263-81850282 None:intergenic 35.0%
ATACGTAATAGCTATTGCAC+TGG + Chr7:81850120-81850139 MsG0780040742.01.T01:CDS 35.0%
CAAACGGAATAATGAGAGAA+GGG - Chr7:81849565-81849584 None:intergenic 35.0%
CAAGATACATCCATCACATT+TGG - Chr7:81847584-81847603 None:intergenic 35.0%
CGATTTAAAAATCTGCAAGG+AGG - Chr7:81850970-81850989 None:intergenic 35.0%
CTTGACCACTACTTCTATAT+TGG - Chr7:81849141-81849160 None:intergenic 35.0%
CTTTGAACTGAAATGAACAC+AGG - Chr7:81851108-81851127 None:intergenic 35.0%
GACATATACTGAGGAATATG+GGG - Chr7:81846572-81846591 None:intergenic 35.0%
GCTCTCATTGTAATAATGCA+GGG + Chr7:81848777-81848796 MsG0780040742.01.T01:intron 35.0%
GGAGGTGATAACAAATATCA+AGG - Chr7:81850537-81850556 None:intergenic 35.0%
TAATGTCAGATGGAATGATC+AGG + Chr7:81850895-81850914 MsG0780040742.01.T01:CDS 35.0%
TCAAACGGAATAATGAGAGA+AGG - Chr7:81849566-81849585 None:intergenic 35.0%
TCTACTTTGCACTGCATATT+TGG + Chr7:81847899-81847918 MsG0780040742.01.T01:intron 35.0%
TGCTCTCATTGTAATAATGC+AGG + Chr7:81848776-81848795 MsG0780040742.01.T01:intron 35.0%
TGTAATCTGTAGAAACGTGA+TGG + Chr7:81850720-81850739 MsG0780040742.01.T01:intron 35.0%
TTCGTCTGCCTTAATTATCA+AGG + Chr7:81850664-81850683 MsG0780040742.01.T01:intron 35.0%
TTGTTGTAATAGCGCTATAG+CGG - Chr7:81846991-81847010 None:intergenic 35.0%
! ACTTTTGAGCTTGACTATGA+TGG + Chr7:81848458-81848477 MsG0780040742.01.T01:CDS 35.0%
! AGTCAGATCTTTAGAGACAA+AGG + Chr7:81846769-81846788 MsG0780040742.01.T01:intron 35.0%
! GTTATCAACCTTGACAGTTT+TGG + Chr7:81848136-81848155 MsG0780040742.01.T01:intron 35.0%
! TAATGAGTTGGAGAAAGACA+TGG - Chr7:81847087-81847106 None:intergenic 35.0%
! TATCTGTTGCTTCTAATAGG+AGG + Chr7:81849984-81850003 MsG0780040742.01.T01:intron 35.0%
! TCCACCATCTTTTCTACTAT+AGG - Chr7:81846698-81846717 None:intergenic 35.0%
! TGGTTTTCGATAGAACACTA+TGG - Chr7:81847067-81847086 None:intergenic 35.0%
!! ATATTTGTTATCACCTCCTC+TGG + Chr7:81850539-81850558 MsG0780040742.01.T01:intron 35.0%
!! GACCTTTTGACTGATTTTGT+TGG + Chr7:81847843-81847862 MsG0780040742.01.T01:intron 35.0%
!! TAGAAAAGATGGTGGAAACT+AGG + Chr7:81846702-81846721 MsG0780040742.01.T01:intron 35.0%
!! TATTTGTTATCACCTCCTCT+GGG + Chr7:81850540-81850559 MsG0780040742.01.T01:intron 35.0%
!! TTGTACTGGTATTTTACAGG+AGG + Chr7:81850829-81850848 MsG0780040742.01.T01:CDS 35.0%
!!! GTTTTTTGAGATGAGAGAGT+TGG + Chr7:81846666-81846685 MsG0780040742.01.T01:intron 35.0%
!!! TAGAGGTGCTAAAACTTTTC+AGG + Chr7:81847473-81847492 MsG0780040742.01.T01:CDS 35.0%
!!! TATGGTTTTTTCCATGTCAC+TGG + Chr7:81850918-81850937 MsG0780040742.01.T01:intron 35.0%
!!! TTTAGGTTTTGCTGTTCGTT+AGG + Chr7:81849943-81849962 MsG0780040742.01.T01:intron 35.0%
AACAACCACACAACTGTTTG+GGG + Chr7:81850048-81850067 MsG0780040742.01.T01:CDS 40.0%
ACAAGATGTTCACATGCAAG+CGG + Chr7:81849213-81849232 MsG0780040742.01.T01:CDS 40.0%
ACAGGTAACTCAAGAGGATA+TGG + Chr7:81851001-81851020 MsG0780040742.01.T01:intron 40.0%
ACTTCCAAGAGAACTTCTTC+TGG + Chr7:81849351-81849370 MsG0780040742.01.T01:CDS 40.0%
AGAGAGAAGAGAAAGATGAG+AGG + Chr7:81850861-81850880 MsG0780040742.01.T01:CDS 40.0%
AGATGATTTAAGGGTAGACG+AGG + Chr7:81848652-81848671 MsG0780040742.01.T01:CDS 40.0%
AGCTATGACACATAATGCCA+AGG + Chr7:81848361-81848380 MsG0780040742.01.T01:CDS 40.0%
AGCTTGACTATGATGGCAAA+CGG + Chr7:81848465-81848484 MsG0780040742.01.T01:CDS 40.0%
AGGAAAGTAATATGGAGGAG+AGG - Chr7:81846640-81846659 None:intergenic 40.0%
ATCCAAACAGGTAACTCAAG+AGG + Chr7:81850995-81851014 MsG0780040742.01.T01:intron 40.0%
ATCCTCTTCATACTTGCTTC+TGG - Chr7:81850019-81850038 None:intergenic 40.0%
ATCCTCTTGAGTTACCTGTT+TGG - Chr7:81851000-81851019 None:intergenic 40.0%
ATGCACCTTTCCTATACTTC+TGG - Chr7:81847500-81847519 None:intergenic 40.0%
CAACAACCACACAACTGTTT+GGG + Chr7:81850047-81850066 MsG0780040742.01.T01:CDS 40.0%
CCATTCTCTCGTACAAGTTT+AGG + Chr7:81848300-81848319 MsG0780040742.01.T01:intron 40.0%
CCTAAACTTGTACGAGAGAA+TGG - Chr7:81848303-81848322 None:intergenic 40.0%
CTTCCAAGAGAACTTCTTCT+GGG + Chr7:81849352-81849371 MsG0780040742.01.T01:CDS 40.0%
GAAAAAACTTACGGGTCTCT+CGG - Chr7:81846618-81846637 None:intergenic 40.0%
GAAACTAGGCTTAAGTGGTT+TGG + Chr7:81846716-81846735 MsG0780040742.01.T01:intron 40.0%
GAGAGCTAATATTGCACGTA+AGG + Chr7:81850185-81850204 MsG0780040742.01.T01:CDS 40.0%
GAGGAGAGGAAAAAACTTAC+GGG - Chr7:81846626-81846645 None:intergenic 40.0%
GATACATCCATCACATTTGG+AGG - Chr7:81847581-81847600 None:intergenic 40.0%
GATATTCATGTGCGTTGTAC+TGG + Chr7:81850815-81850834 MsG0780040742.01.T01:CDS 40.0%
GGAGGAGAGGAAAAAACTTA+CGG - Chr7:81846627-81846646 None:intergenic 40.0%
GGCATCTTAATAGTTGGGTT+GGG + Chr7:81848021-81848040 MsG0780040742.01.T01:intron 40.0%
GTGTATGATTAGCGAGAAAG+CGG + Chr7:81851175-81851194 MsG0780040742.01.T01:CDS 40.0%
TACACGCCTGGATTAATACA+TGG + Chr7:81847805-81847824 MsG0780040742.01.T01:intron 40.0%
TACCATGATGTGGTGTAGTT+GGG - Chr7:81847450-81847469 None:intergenic 40.0%
TAGAAGTAGTGGTCAAGCTT+TGG + Chr7:81849144-81849163 MsG0780040742.01.T01:CDS 40.0%
TAGAGTAATTCAGCTTGGGA+AGG - Chr7:81849241-81849260 None:intergenic 40.0%
TCAACAACCACACAACTGTT+TGG + Chr7:81850046-81850065 MsG0780040742.01.T01:CDS 40.0%
TCAGATGGAATGATCAGGTA+TGG + Chr7:81850900-81850919 MsG0780040742.01.T01:CDS 40.0%
TCCTCTTCATACTTGCTTCT+GGG - Chr7:81850018-81850037 None:intergenic 40.0%
TCGAAAACAGATTGAGCTTG+AGG + Chr7:81846487-81846506 MsG0780040742.01.T01:CDS 40.0%
TGCACCTTTCCTATACTTCT+GGG - Chr7:81847499-81847518 None:intergenic 40.0%
TGGTAGAATTGTTAAGGGAC+AGG + Chr7:81849408-81849427 MsG0780040742.01.T01:CDS 40.0%
TGTATGATTAGCGAGAAAGC+GGG + Chr7:81851176-81851195 MsG0780040742.01.T01:CDS 40.0%
TGTGTCTACCAAAACTGTCA+AGG - Chr7:81848147-81848166 None:intergenic 40.0%
TTGTGGATCACAGGAAATAG+TGG - Chr7:81847281-81847300 None:intergenic 40.0%
! CAAACAGATGGACTTTGCAA+AGG + Chr7:81848691-81848710 MsG0780040742.01.T01:CDS 40.0%
! CGTGCTGGTAGAATTGTTAA+GGG + Chr7:81849403-81849422 MsG0780040742.01.T01:CDS 40.0%
! GAAATGAACACAGGCCTTTT+TGG - Chr7:81851099-81851118 None:intergenic 40.0%
! TCGTGCTGGTAGAATTGTTA+AGG + Chr7:81849402-81849421 MsG0780040742.01.T01:CDS 40.0%
! TTTTCATTTGGATCTGCCTC+TGG - Chr7:81848992-81849011 None:intergenic 40.0%
!! CGAAGGGCATCTTAATAGTT+GGG + Chr7:81848016-81848035 MsG0780040742.01.T01:intron 40.0%
!! GCGTTGTACTGGTATTTTAC+AGG + Chr7:81850826-81850845 MsG0780040742.01.T01:CDS 40.0%
!! GGTTGATGAAAGCAAACAGA+TGG + Chr7:81848679-81848698 MsG0780040742.01.T01:CDS 40.0%
!! TGACAGTTTTGGTAGACACA+TGG + Chr7:81848147-81848166 MsG0780040742.01.T01:intron 40.0%
!! TGGTCAAGCTTTGGAATTCA+AGG + Chr7:81849153-81849172 MsG0780040742.01.T01:CDS 40.0%
AAGGCTTATCCCACTAAGTC+AGG - Chr7:81846898-81846917 None:intergenic 45.0%
AAGGGCGACCAAAATGATGA+GGG + Chr7:81848602-81848621 MsG0780040742.01.T01:CDS 45.0%
ACAGCTGAAGAGATTGGAGA+AGG + Chr7:81848583-81848602 MsG0780040742.01.T01:CDS 45.0%
ACATAATGCCAAGGCATGCA+TGG + Chr7:81848370-81848389 MsG0780040742.01.T01:CDS 45.0%
ACCACATCATGGTACGATAG+AGG + Chr7:81847456-81847475 MsG0780040742.01.T01:CDS 45.0%
ACCTCTATCGTACCATGATG+TGG - Chr7:81847460-81847479 None:intergenic 45.0%
AGAAGAGAAGGAGGAGATAG+AGG - Chr7:81850254-81850273 None:intergenic 45.0%
AGGACTTAAACATCCATGCC+TGG + Chr7:81849173-81849192 MsG0780040742.01.T01:CDS 45.0%
AGTATATGTCATCTGCGCCT+TGG + Chr7:81846582-81846601 MsG0780040742.01.T01:CDS 45.0%
ATAGGTACGAGTACAGTACC+AGG - Chr7:81849825-81849844 None:intergenic 45.0%
ATCCCAACTACACCACATCA+TGG + Chr7:81847445-81847464 MsG0780040742.01.T01:CDS 45.0%
ATGGAAAGACCACGGAAAGT+AGG + Chr7:81848389-81848408 MsG0780040742.01.T01:CDS 45.0%
CAGCTGAAGAGATTGGAGAA+GGG + Chr7:81848584-81848603 MsG0780040742.01.T01:CDS 45.0%
CAGTATCCTCTCGAATACGT+AGG - Chr7:81848892-81848911 None:intergenic 45.0%
CCTCTTCATACTTGCTTCTG+GGG - Chr7:81850017-81850036 None:intergenic 45.0%
CGCTCGAAAGAAGTTCTTGA+AGG + Chr7:81848556-81848575 MsG0780040742.01.T01:CDS 45.0%
CTCTCGGCATTAAGATACCA+AGG - Chr7:81846602-81846621 None:intergenic 45.0%
CTTATCCCACTAAGTCAGGT+GGG - Chr7:81846894-81846913 None:intergenic 45.0%
GAGAACATCACAAAGGCTTG+TGG - Chr7:81851131-81851150 None:intergenic 45.0%
GCACATTGCTGCTGATGAAA+AGG + Chr7:81848430-81848449 MsG0780040742.01.T01:CDS 45.0%
GCAGCTTGAGAACATCACAA+AGG - Chr7:81851138-81851157 None:intergenic 45.0%
GCTTGACTATGATGGCAAAC+GGG + Chr7:81848466-81848485 MsG0780040742.01.T01:CDS 45.0%
GGAACAACAGCTGAAGAGAT+TGG + Chr7:81848577-81848596 MsG0780040742.01.T01:CDS 45.0%
GGACTTAAACATCCATGCCT+GGG + Chr7:81849174-81849193 MsG0780040742.01.T01:CDS 45.0%
GGGCATCTTAATAGTTGGGT+TGG + Chr7:81848020-81848039 MsG0780040742.01.T01:intron 45.0%
GGTAACTCAAGAGGATATGG+AGG + Chr7:81851004-81851023 MsG0780040742.01.T01:intron 45.0%
GTACCATGATGTGGTGTAGT+TGG - Chr7:81847451-81847470 None:intergenic 45.0%
GTAGAAACGTGATGGCACTA+TGG + Chr7:81850728-81850747 MsG0780040742.01.T01:intron 45.0%
TAAGCTTCGAGAGGCCAAAA+AGG + Chr7:81851082-81851101 MsG0780040742.01.T01:intron 45.0%
TACGAGTACAGTACCAGGTA+CGG - Chr7:81849820-81849839 None:intergenic 45.0%
TCATCCAGAACTACGTCTTC+TGG - Chr7:81850438-81850457 None:intergenic 45.0%
TCGAATACGTAGGTTCCTGA+AGG - Chr7:81848882-81848901 None:intergenic 45.0%
TGACCCAGAAGAAGTTCTCT+TGG - Chr7:81849358-81849377 None:intergenic 45.0%
TGACTTAGTGGGATAAGCCT+TGG + Chr7:81846897-81846916 MsG0780040742.01.T01:intron 45.0%
TGGTGGAAACTAGGCTTAAG+TGG + Chr7:81846711-81846730 MsG0780040742.01.T01:intron 45.0%
TGTTCCAGAAGACGTAGTTC+TGG + Chr7:81850431-81850450 MsG0780040742.01.T01:CDS 45.0%
TGTTGTGCCTCCAAATGTGA+TGG + Chr7:81847571-81847590 MsG0780040742.01.T01:intron 45.0%
TTCCTGAACTAAGCTTCGAG+AGG + Chr7:81851073-81851092 MsG0780040742.01.T01:intron 45.0%
TTTAAGGGTAGACGAGGCAA+AGG + Chr7:81848658-81848677 MsG0780040742.01.T01:CDS 45.0%
! AAGAGGATATGGAGGCATAC+AGG + Chr7:81851012-81851031 MsG0780040742.01.T01:intron 45.0%
! AAGCCTTTTCCCACTAAGTG+GGG + Chr7:81847016-81847035 MsG0780040742.01.T01:intron 45.0%
! CAAGCCTTTTCCCACTAAGT+GGG + Chr7:81847015-81847034 MsG0780040742.01.T01:intron 45.0%
! CAAGTTGAGTATGATCGTGC+TGG + Chr7:81849388-81849407 MsG0780040742.01.T01:CDS 45.0%
! GCAGGCCTTTTCTCTTCTAT+TGG - Chr7:81850396-81850415 None:intergenic 45.0%
! GTCTTGTTAGTTTACACGCC+TGG + Chr7:81847793-81847812 MsG0780040742.01.T01:intron 45.0%
! TAATGCAGGGCGAAGTTGAT+TGG + Chr7:81848790-81848809 MsG0780040742.01.T01:intron 45.0%
! TGCAGCATTTAAAACCCCAC+TGG - Chr7:81850092-81850111 None:intergenic 45.0%
! TTGCAGCACCCTCATCATTT+TGG - Chr7:81848613-81848632 None:intergenic 45.0%
!! CTTTTCAGGCCCAGAAGTAT+AGG + Chr7:81847487-81847506 MsG0780040742.01.T01:CDS 45.0%
!! GCGAAGGGCATCTTAATAGT+TGG + Chr7:81848015-81848034 MsG0780040742.01.T01:intron 45.0%
!! TGAGGTTGATGAAGATGGCA+AGG + Chr7:81846538-81846557 MsG0780040742.01.T01:CDS 45.0%
!! TTGTATTCGGTGGATTGCAG+TGG + Chr7:81846442-81846461 MsG0780040742.01.T01:CDS 45.0%
ACGAGTACAGTACCAGGTAC+GGG - Chr7:81849819-81849838 None:intergenic 50.0%
AGGCATGCATGGAAAGACCA+CGG + Chr7:81848381-81848400 MsG0780040742.01.T01:CDS 50.0%
ATGAGCCCCAAACAGTTGTG+TGG - Chr7:81850056-81850075 None:intergenic 50.0%
ATGATGGCAAACGGGACAGA+TGG + Chr7:81848474-81848493 MsG0780040742.01.T01:CDS 50.0%
ATGTAGCCCACCTGACTTAG+TGG + Chr7:81846885-81846904 MsG0780040742.01.T01:intron 50.0%
CACATTATGACCCCAAGACC+AGG + Chr7:81848945-81848964 MsG0780040742.01.T01:CDS 50.0%
CAGGAACCTACGTATTCGAG+AGG + Chr7:81848883-81848902 MsG0780040742.01.T01:intron 50.0%
CCACTTAGTGGGAAAAGGCT+TGG - Chr7:81847017-81847036 None:intergenic 50.0%
CCATCTTCATCAACCTCAGC+AGG - Chr7:81846536-81846555 None:intergenic 50.0%
CCCCAGAAGCAAGTATGAAG+AGG + Chr7:81850014-81850033 MsG0780040742.01.T01:CDS 50.0%
CTCAAGCTGCCAAGAGGAAT+GGG + Chr7:81851148-81851167 MsG0780040742.01.T01:intron 50.0%
CTTGAGGAAGCTCGTAAAGC+CGG + Chr7:81846503-81846522 MsG0780040742.01.T01:CDS 50.0%
GAAGGGCGACCAAAATGATG+AGG + Chr7:81848601-81848620 MsG0780040742.01.T01:CDS 50.0%
GATGTTCTCAAGCTGCCAAG+AGG + Chr7:81851142-81851161 MsG0780040742.01.T01:intron 50.0%
GCTTATCCCACTAAGTCAGG+TGG - Chr7:81846895-81846914 None:intergenic 50.0%
GCTTGCCGATGCACTCAAAA+AGG + Chr7:81850464-81850483 MsG0780040742.01.T01:CDS 50.0%
GGCGCAGATGACATATACTG+AGG - Chr7:81846581-81846600 None:intergenic 50.0%
TACACTCTGCCCATTCCTCT+TGG - Chr7:81851160-81851179 None:intergenic 50.0%
TACAGTACCAGGTACGGGTA+CGG - Chr7:81849814-81849833 None:intergenic 50.0%
TCCCTTGTCAAATGCTTCCC+AGG - Chr7:81849194-81849213 None:intergenic 50.0%
TCTCAAGCTGCCAAGAGGAA+TGG + Chr7:81851147-81851166 MsG0780040742.01.T01:intron 50.0%
TGCAGTGGCATTCAAGTCCA+GGG + Chr7:81846457-81846476 MsG0780040742.01.T01:CDS 50.0%
TGCTTTGCTCCTACTTTCCG+TGG - Chr7:81848401-81848420 None:intergenic 50.0%
TGGAAGAGGATCTTCACGCA+TGG - Chr7:81848972-81848991 None:intergenic 50.0%
TGGTCTTTCCATGCATGCCT+TGG - Chr7:81848381-81848400 None:intergenic 50.0%
TGTAGCCCACCTGACTTAGT+GGG + Chr7:81846886-81846905 MsG0780040742.01.T01:intron 50.0%
TGTCAAATGCTTCCCAGGCA+TGG - Chr7:81849189-81849208 None:intergenic 50.0%
TTCTTCTGGGTCAGAGTGAG+AGG + Chr7:81849365-81849384 MsG0780040742.01.T01:CDS 50.0%
TTGCAGTGGCATTCAAGTCC+AGG + Chr7:81846456-81846475 MsG0780040742.01.T01:CDS 50.0%
! ACACAACTGTTTGGGGCTCA+TGG + Chr7:81850055-81850074 MsG0780040742.01.T01:CDS 50.0%
! ACTTCTTTCGAGCGTCGTCT+CGG - Chr7:81848550-81848569 None:intergenic 50.0%
! ATGGTGGAAGGATCACCAGT+GGG + Chr7:81850074-81850093 MsG0780040742.01.T01:CDS 50.0%
! CAGGCCCAGAAGTATAGGAA+AGG + Chr7:81847492-81847511 MsG0780040742.01.T01:CDS 50.0%
! CCAAGCCTTTTCCCACTAAG+TGG + Chr7:81847014-81847033 MsG0780040742.01.T01:intron 50.0%
! CTGTTTTCGATGATCCTCCC+TGG - Chr7:81846477-81846496 None:intergenic 50.0%
! CTTTTCCCACTAAGTGGGGT+CGG + Chr7:81847020-81847039 MsG0780040742.01.T01:intron 50.0%
! TTTGGATCTGCCTCTGGAAG+AGG - Chr7:81848986-81849005 None:intergenic 50.0%
!! ACTAAGTCAGGTGGGCTACA+TGG - Chr7:81846886-81846905 None:intergenic 50.0%
!! CCTGCTGAGGTTGATGAAGA+TGG + Chr7:81846533-81846552 MsG0780040742.01.T01:CDS 50.0%
!! GCCTGGGAAGCATTTGACAA+GGG + Chr7:81849190-81849209 MsG0780040742.01.T01:CDS 50.0%
!! TGAGGGTGCTGCAATTGATG+AGG + Chr7:81848619-81848638 MsG0780040742.01.T01:CDS 50.0%
!! TGCCTGGGAAGCATTTGACA+AGG + Chr7:81849189-81849208 MsG0780040742.01.T01:CDS 50.0%
AACCTCAGCAGGTGCAAGTC+CGG - Chr7:81846525-81846544 None:intergenic 55.0%
AAGCGTGTGCGAACAACAGG+CGG + Chr7:81848719-81848738 MsG0780040742.01.T01:CDS 55.0%
ACAGTACCAGGTACGGGTAC+GGG - Chr7:81849813-81849832 None:intergenic 55.0%
AGGATCTTCACGCATGGACC+TGG - Chr7:81848966-81848985 None:intergenic 55.0%
AGTGGCATTCAAGTCCAGGG+AGG + Chr7:81846460-81846479 MsG0780040742.01.T01:CDS 55.0%
ATGTATCCCGTACCCGTACC+TGG + Chr7:81849804-81849823 MsG0780040742.01.T01:intron 55.0%
CGACCCCACTTAGTGGGAAA+AGG - Chr7:81847022-81847041 None:intergenic 55.0%
GCGTGAAGATCCTCTTCCAG+AGG + Chr7:81848973-81848992 MsG0780040742.01.T01:CDS 55.0%
GGCAAACGGGACAGATGGAA+TGG + Chr7:81848479-81848498 MsG0780040742.01.T01:CDS 55.0%
GGCCTCTCGAAGCTTAGTTC+AGG - Chr7:81851078-81851097 None:intergenic 55.0%
GTATGGCAATGCAGCTGACG+AGG + Chr7:81849324-81849343 MsG0780040742.01.T01:CDS 55.0%
TGGTGGAAGGATCACCAGTG+GGG + Chr7:81850075-81850094 MsG0780040742.01.T01:CDS 55.0%
TTCACGCATGGACCTGGTCT+TGG - Chr7:81848960-81848979 None:intergenic 55.0%
! ATAGAGGCGCAGCAGGGATA+TGG - Chr7:81850238-81850257 None:intergenic 55.0%
! CAACTGTTTGGGGCTCATGG+TGG + Chr7:81850058-81850077 MsG0780040742.01.T01:CDS 55.0%
! CATGGTGGAAGGATCACCAG+TGG + Chr7:81850073-81850092 MsG0780040742.01.T01:CDS 55.0%
! CTTCTTTCGAGCGTCGTCTC+GGG - Chr7:81848549-81848568 None:intergenic 55.0%
! GAGAAGCGTGTGCGAACAAC+AGG + Chr7:81848716-81848735 MsG0780040742.01.T01:CDS 55.0%
! GTGGGAGTACAGGAACTGTG+AGG + Chr7:81848741-81848760 MsG0780040742.01.T01:CDS 55.0%
! TCACGCATGGACCTGGTCTT+GGG - Chr7:81848959-81848978 None:intergenic 55.0%
! TGCTGGTATTGAGGCTGCTG+AGG + Chr7:81850146-81850165 MsG0780040742.01.T01:CDS 55.0%
! TGTTTGGGGCTCATGGTGGA+AGG + Chr7:81850062-81850081 MsG0780040742.01.T01:CDS 55.0%
!! AAGCACCGACCCCACTTAGT+GGG - Chr7:81847028-81847047 None:intergenic 55.0%
!! AGCTATTGCACTGGTGCTGC+TGG + Chr7:81850129-81850148 MsG0780040742.01.T01:CDS 55.0%
!! CACTGGTGCTGCTGGTATTG+AGG + Chr7:81850137-81850156 MsG0780040742.01.T01:CDS 55.0%
AGCGAGAAAGCGGGACAGAG+TGG + Chr7:81851185-81851204 MsG0780040742.01.T01:CDS 60.0%
ATTGAGGCTGCTGAGGCTGC+AGG + Chr7:81850153-81850172 MsG0780040742.01.T01:CDS 60.0%
GCACGTAAGGAGTCTGCTGC+AGG + Chr7:81850198-81850217 MsG0780040742.01.T01:CDS 60.0%
GTGTGCGAACAACAGGCGGT+GGG + Chr7:81848723-81848742 MsG0780040742.01.T01:CDS 60.0%
! ACAACAGGCGGTGGGAGTAC+AGG + Chr7:81848731-81848750 MsG0780040742.01.T01:CDS 60.0%
! GAGGAGATAGAGGCGCAGCA+GGG - Chr7:81850244-81850263 None:intergenic 60.0%
!! CACGCATGGACCTGGTCTTG+GGG - Chr7:81848958-81848977 None:intergenic 60.0%
!! GAAGCACCGACCCCACTTAG+TGG - Chr7:81847029-81847048 None:intergenic 60.0%
AGCCGGACTTGCACCTGCTG+AGG + Chr7:81846520-81846539 MsG0780040742.01.T01:CDS 65.0%
CGTGTGCGAACAACAGGCGG+TGG + Chr7:81848722-81848741 MsG0780040742.01.T01:CDS 65.0%
! GGAGGAGATAGAGGCGCAGC+AGG - Chr7:81850245-81850264 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 81846419 81851223 81846419 ID=MsG0780040742.01;Name=MsG0780040742.01
Chr7 mRNA 81846419 81851223 81846419 ID=MsG0780040742.01.T01;Parent=MsG0780040742.01;Name=MsG0780040742.01.T01;_AED=0.41;_eAED=0.45;_QI=0|0.75|0.66|1|0.87|0.66|9|0|570
Chr7 exon 81846419 81846625 81846419 ID=MsG0780040742.01.T01:exon:19043;Parent=MsG0780040742.01.T01
Chr7 exon 81847414 81847526 81847414 ID=MsG0780040742.01.T01:exon:19044;Parent=MsG0780040742.01.T01
Chr7 exon 81848355 81848762 81848355 ID=MsG0780040742.01.T01:exon:19045;Parent=MsG0780040742.01.T01
Chr7 exon 81848886 81849021 81848886 ID=MsG0780040742.01.T01:exon:19046;Parent=MsG0780040742.01.T01
Chr7 exon 81849130 81849429 81849130 ID=MsG0780040742.01.T01:exon:19047;Parent=MsG0780040742.01.T01
Chr7 exon 81850003 81850219 81850003 ID=MsG0780040742.01.T01:exon:19048;Parent=MsG0780040742.01.T01
Chr7 exon 81850382 81850485 81850382 ID=MsG0780040742.01.T01:exon:19049;Parent=MsG0780040742.01.T01
Chr7 exon 81850764 81850921 81850764 ID=MsG0780040742.01.T01:exon:19050;Parent=MsG0780040742.01.T01
Chr7 exon 81851154 81851223 81851154 ID=MsG0780040742.01.T01:exon:19051;Parent=MsG0780040742.01.T01
Chr7 CDS 81846419 81846625 81846419 ID=MsG0780040742.01.T01:cds;Parent=MsG0780040742.01.T01
Chr7 CDS 81847414 81847526 81847414 ID=MsG0780040742.01.T01:cds;Parent=MsG0780040742.01.T01
Chr7 CDS 81848355 81848762 81848355 ID=MsG0780040742.01.T01:cds;Parent=MsG0780040742.01.T01
Chr7 CDS 81848886 81849021 81848886 ID=MsG0780040742.01.T01:cds;Parent=MsG0780040742.01.T01
Chr7 CDS 81849130 81849429 81849130 ID=MsG0780040742.01.T01:cds;Parent=MsG0780040742.01.T01
Chr7 CDS 81850003 81850219 81850003 ID=MsG0780040742.01.T01:cds;Parent=MsG0780040742.01.T01
Chr7 CDS 81850382 81850485 81850382 ID=MsG0780040742.01.T01:cds;Parent=MsG0780040742.01.T01
Chr7 CDS 81850764 81850921 81850764 ID=MsG0780040742.01.T01:cds;Parent=MsG0780040742.01.T01
Chr7 CDS 81851154 81851223 81851154 ID=MsG0780040742.01.T01:cds;Parent=MsG0780040742.01.T01
Gene Sequence

>MsG0780040742.01.T01

TTGTTTCTGCATGTTAATGAAATTTGTATTCGGTGGATTGCAGTGGCATTCAAGTCCAGGGAGGATCATCGAAAACAGATTGAGCTTGAGGAAGCTCGTAAAGCCGGACTTGCACCTGCTGAGGTTGATGAAGATGGCAAGGAAATCAATCCCCATATTCCTCAGTATATGTCATCTGCGCCTTGGTATCTTAATGCCGAGAGACCCAGTTTGAAACATCAAAGGAAATGGAAATCTGATCCCAACTACACCACATCATGGTACGATAGAGGTGCTAAAACTTTTCAGGCCCAGAAGTATAGGAAAGGTGCATGTGAGAACTGCGGAGCTATGACACATAATGCCAAGGCATGCATGGAAAGACCACGGAAAGTAGGAGCAAAGCATACAGACAAGCACATTGCTGCTGATGAAAAGGTAGAAACTTTTGAGCTTGACTATGATGGCAAACGGGACAGATGGAATGGTTATGATGCTTCAACATATGCTCGAGTCATTGAGAGATATGAAGCCCGAGACGACGCTCGAAAGAAGTTCTTGAAGGAACAACAGCTGAAGAGATTGGAGAAGGGCGACCAAAATGATGAGGGTGCTGCAATTGATGAGGCTGAAGATGAAGATGATTTAAGGGTAGACGAGGCAAAGGTTGATGAAAGCAAACAGATGGACTTTGCAAAGGTTGAGAAGCGTGTGCGAACAACAGGCGGTGGGAGTACAGGAACTGTGAGGAACCTACGTATTCGAGAGGATACTGCAAAATATCTTCTAAATCTTGATGTCAATTCTGCACATTATGACCCCAAGACCAGGTCCATGCGTGAAGATCCTCTTCCAGAGGCAGATCCAAATGAAAAGTTTTACTTGGGTGATAACCAATATAGAAGTAGTGGTCAAGCTTTGGAATTCAAGGACTTAAACATCCATGCCTGGGAAGCATTTGACAAGGGACAAGATGTTCACATGCAAGCGGCTCCTTCCCAAGCTGAATTACTCTATAAGAATTTCAAGGTCATGAAGGAGAAATTGAAGTCTCAAACAAAGGACACTATTATTGAGAAGTATGGCAATGCAGCTGACGAGGACAAACTTCCAAGAGAACTTCTTCTGGGTCAGAGTGAGAGGCAAGTTGAGTATGATCGTGCTGGTAGAATTGTTAAGGGACAGGAGGTCGCAATCCCCAGAAGCAAGTATGAAGAGGATGTTTACATCAACAACCACACAACTGTTTGGGGCTCATGGTGGAAGGATCACCAGTGGGGTTTTAAATGCTGCAAGCAGACAATACGTAATAGCTATTGCACTGGTGCTGCTGGTATTGAGGCTGCTGAGGCTGCAGGTGATCTTATGAGAGCTAATATTGCACGTAAGGAGTCTGCTGCAGAGGATCCTAAACCAATAGAAGAGAAAAGGCCTGCTACATGGGGAACTGATGTTCCAGAAGACGTAGTTCTGGATGAAAAATTGCTTGCCGATGCACTCAAAAAGCATAAAGTCATTTATTCTGGATATTTGAATCTGTTTGAGGTGAATTATTCTGATATTCATGTGCGTTGTACTGGTATTTTACAGGAGGATCAAAGAAAGAGAGAAGAGAAAGATGAGAGGAAGCGTAAATATAATGTCAGATGGAATGATCAGGTATGCTGCCAAGAGGAATGGGCAGAGTGTATGATTAGCGAGAAAGCGGGACAGAGTGGAACTCTTGATATTTGA

Protein sequence

>MsG0780040742.01.T01

LFLHVNEICIRWIAVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTTSWYDRGAKTFQAQKYRKGACENCGAMTHNAKACMERPRKVGAKHTDKHIAADEKVETFELDYDGKRDRWNGYDASTYARVIERYEARDDARKKFLKEQQLKRLEKGDQNDEGAAIDEAEDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPEADPNEKFYLGDNQYRSSGQALEFKDLNIHAWEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKSQTKDTIIEKYGNAADEDKLPRELLLGQSERQVEYDRAGRIVKGQEVAIPRSKYEEDVYINNHTTVWGSWWKDHQWGFKCCKQTIRNSYCTGAAGIEAAEAAGDLMRANIARKESAAEDPKPIEEKRPATWGTDVPEDVVLDEKLLADALKKHKVIYSGYLNLFEVNYSDIHVRCTGILQEDQRKREEKDERKRKYNVRWNDQVCCQEEWAECMISEKAGQSGTLDI*