AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041183.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041183.01.T01 MTR_7g106190 85.326 368 6 1 1 320 1 368 0.0 622
MsG0780041183.01.T01 MTR_5g027350 33.217 286 120 9 69 305 132 395 9.63e-30 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041183.01.T01 AT5G06350 47.500 360 138 4 15 324 16 374 1.31e-95 302
MsG0780041183.01.T01 AT5G06350 47.500 360 138 4 15 324 16 374 1.31e-95 302
MsG0780041183.01.T01 AT5G27010 41.223 376 164 8 1 321 1 374 1.36e-71 238
MsG0780041183.01.T01 AT4G04680 60.145 138 54 1 43 180 25 161 9.86e-50 166
MsG0780041183.01.T01 AT4G04680 52.229 157 67 1 41 189 23 179 4.21e-47 160

Find 64 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCAAACCTTTCTTGTTTA+CGG 0.233988 7:+87772729 None:intergenic
AGATGCATTGATGGGTATTA+AGG 0.272941 7:-87772087 MsG0780041183.01.T01:CDS
TCGGTGTTTGTTGCATTCTT+AGG 0.273255 7:+87773388 None:intergenic
GCTGATCACTTCTTTATTGA+TGG 0.276027 7:-87770583 MsG0780041183.01.T01:CDS
ATAGTCAGGTCCTTCGTTTA+TGG 0.279676 7:-87768330 MsG0780041183.01.T01:CDS
TGAAAACTATTTACTAATAC+TGG 0.290412 7:+87768441 None:intergenic
CAGAAAAGAAAGGTTAAGAT+TGG 0.302303 7:-87773427 MsG0780041183.01.T01:CDS
AATCTTGAAGGGAAGTCTTT+TGG 0.304026 7:-87768387 MsG0780041183.01.T01:CDS
TTATGCAACACTAGTTCTTC+TGG 0.306954 7:+87772047 None:intergenic
TAGTCAGGTCCTTCGTTTAT+GGG 0.326776 7:-87768329 MsG0780041183.01.T01:CDS
TCCCACAGCAATTATTCTTC+CGG 0.328532 7:-87772785 MsG0780041183.01.T01:intron
GGCAGCTGACATTCGGTTCA+TGG 0.342736 7:-87770532 MsG0780041183.01.T01:CDS
CCCAAATACAGATGCATTGA+TGG 0.346313 7:-87772096 MsG0780041183.01.T01:intron
ATTTAATGCAATGACACATT+TGG 0.411129 7:-87770553 MsG0780041183.01.T01:CDS
CTCTAAATTTCAGAAAAGAA+AGG 0.418104 7:-87773437 MsG0780041183.01.T01:intron
CACATTTGGCAGCTGACATT+CGG 0.424283 7:-87770539 MsG0780041183.01.T01:CDS
GCAGAGTGTAGCAGCTGATA+AGG 0.425471 7:-87772761 MsG0780041183.01.T01:CDS
AGAAAAGAAAGGTTAAGATT+GGG 0.434831 7:-87773426 MsG0780041183.01.T01:CDS
AAAGACCATGCCCTGGATCA+AGG 0.438636 7:+87768199 None:intergenic
TTACTACATTGTTTAATGCC+AGG 0.466030 7:-87768413 MsG0780041183.01.T01:CDS
GTGGAGGCGATGTAGCTGTA+TGG 0.475781 7:-87768272 MsG0780041183.01.T01:CDS
GGTTTAGCCGTAAACAAGAA+AGG 0.493197 7:-87772736 MsG0780041183.01.T01:CDS
CACGCCTCTCTTCTCCCTTA+CGG 0.501648 7:-87773746 MsG0780041183.01.T01:five_prime_UTR
TTTGTTGCATTCTTAGGTGG+AGG 0.502038 7:+87773394 None:intergenic
GAAAGTACCTCTTTGCAACT+AGG 0.503971 7:+87771930 None:intergenic
GATAACTCTATGAGCTCTAC+TGG 0.510632 7:-87768668 MsG0780041183.01.T01:intron
GAGGATAATATTCAAGAGTA+AGG 0.511984 7:+87770493 None:intergenic
ATAGCATAGATCTTATAGTC+AGG 0.512582 7:-87768344 MsG0780041183.01.T01:CDS
AGGGCATGGTCTTTCACAAA+AGG 0.517426 7:-87768190 MsG0780041183.01.T01:CDS
TACTACATTGTTTAATGCCA+GGG 0.517987 7:-87768412 MsG0780041183.01.T01:CDS
AACACCGAAGTTAAATCTAA+AGG 0.523821 7:-87773373 MsG0780041183.01.T01:intron
GAAGCTGAGGAATGGCCGTA+AGG 0.526329 7:+87773731 None:intergenic
AATGCCAGGGAGAATCTTGA+AGG 0.526657 7:-87768399 MsG0780041183.01.T01:CDS
CTTTGGGACGAGTCATCTTG+CGG 0.536705 7:+87773591 None:intergenic
CTTCCCTTCAAGATTCTCCC+TGG 0.552594 7:+87768395 None:intergenic
GTGTTTGTTGCATTCTTAGG+TGG 0.557761 7:+87773391 None:intergenic
GTGTGTAACAGTGTAGTTTG+CGG 0.563259 7:+87773766 None:intergenic
AGACCATGCCCTGGATCAAG+GGG 0.564620 7:+87768201 None:intergenic
AAGACCATGCCCTGGATCAA+GGG 0.565322 7:+87768200 None:intergenic
TCAGCTGCTACACTCTGCTC+CGG 0.568142 7:+87772766 None:intergenic
TCATATCATAATGAAACTGA+AGG 0.568388 7:-87768472 MsG0780041183.01.T01:CDS
AAAGAAAGGTTAAGATTGGG+AGG 0.572373 7:-87773423 MsG0780041183.01.T01:CDS
TGCACAAGTTCTCAAGGTGG+AGG 0.574592 7:-87768288 MsG0780041183.01.T01:CDS
GGTACCTTTAGATTTAACTT+CGG 0.576626 7:+87773369 None:intergenic
CATTGGCGATGATGATAAAG+TGG 0.578034 7:-87771994 MsG0780041183.01.T01:CDS
AGTGTAGCAGCTGATAAGGC+AGG 0.580086 7:-87772757 MsG0780041183.01.T01:CDS
AAGCTGAGGAATGGCCGTAA+GGG 0.585058 7:+87773732 None:intergenic
GAGGACTCGAAGCTGAGGAA+TGG 0.595796 7:+87773723 None:intergenic
TCGGAATGCACAAGTTCTCA+AGG 0.599118 7:-87768294 MsG0780041183.01.T01:CDS
TTATGGGATTGATAAGAAGT+CGG 0.601540 7:-87768313 MsG0780041183.01.T01:CDS
CCAAATACAGATGCATTGAT+GGG 0.602673 7:-87772095 MsG0780041183.01.T01:intron
TGGAGGCGATGTAGCTGTAT+GGG 0.604595 7:-87768271 MsG0780041183.01.T01:CDS
TCTGCATAAGAAGAAAAGCA+AGG 0.607612 7:+87770471 None:intergenic
GTTTAAGCTATAAGCAGTGA+CGG 0.615295 7:+87773677 None:intergenic
CACAATGCAAAAGTTCGAAG+AGG 0.620827 7:-87772676 MsG0780041183.01.T01:intron
GGTGGGAGGACTCGAAGCTG+AGG 0.627099 7:+87773718 None:intergenic
CCTAACTAGTCACCTCCAGA+AGG 0.638665 7:+87768144 None:intergenic
TTGTTGCGGTTAATGGTGGG+AGG 0.640627 7:+87773704 None:intergenic
ATGCCAGGGAGAATCTTGAA+GGG 0.643897 7:-87768398 MsG0780041183.01.T01:CDS
CTTATCAATCCCATAAACGA+AGG 0.652747 7:+87768320 None:intergenic
ATGGCCGTAAGGGAGAAGAG+AGG 0.706314 7:+87773742 None:intergenic
GAATGCACAAGTTCTCAAGG+TGG 0.723066 7:-87768291 MsG0780041183.01.T01:CDS
GACCATGCCCTGGATCAAGG+GGG 0.736774 7:+87768202 None:intergenic
GCATAAGAAGAAAAGCAAGG+AGG 0.746060 7:+87770474 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTGAATTTAGATTAATAT+TGG + Chr7:87770634-87770653 None:intergenic 10.0%
!!! CAATATAAATATATTTTTTC+TGG - Chr7:87770649-87770668 MsG0780041183.01.T01:intron 10.0%
!! ATCCTAATTAATAATCTATT+TGG - Chr7:87769797-87769816 MsG0780041183.01.T01:intron 15.0%
!! TAACTTTAAACTTTACTAAA+AGG - Chr7:87771590-87771609 MsG0780041183.01.T01:intron 15.0%
!! TAAGATCTAAATAATATCAA+TGG + Chr7:87770929-87770948 None:intergenic 15.0%
!! TATGATTGTATAAAAATTAG+AGG + Chr7:87771237-87771256 None:intergenic 15.0%
!! TTGTTATATGATTAAATTCT+TGG - Chr7:87773069-87773088 MsG0780041183.01.T01:intron 15.0%
!!! ATACTGAATTTTTGTTATAT+TGG - Chr7:87772458-87772477 MsG0780041183.01.T01:intron 15.0%
!!! ATGCTTTATCTTATTTTAAT+AGG - Chr7:87773198-87773217 MsG0780041183.01.T01:intron 15.0%
!!! ATGTTTGATAATAAATTTCA+TGG + Chr7:87769578-87769597 None:intergenic 15.0%
!!! TTATTTTAATAGGATGATAT+TGG - Chr7:87773208-87773227 MsG0780041183.01.T01:intron 15.0%
!! AATAAGAATAACAACGAAAA+TGG + Chr7:87771647-87771666 None:intergenic 20.0%
!! ATCTAAATAATATCAATGGA+TGG + Chr7:87770925-87770944 None:intergenic 20.0%
!! TGAAAACTATTTACTAATAC+TGG + Chr7:87773489-87773508 None:intergenic 20.0%
!! TGCCAAATAGATTATTAATT+AGG + Chr7:87769802-87769821 None:intergenic 20.0%
!! TTAAAATTTCCTTCAGAAAA+TGG - Chr7:87772231-87772250 MsG0780041183.01.T01:intron 20.0%
!! TTAAGAAAACGTTTACAATA+TGG + Chr7:87771500-87771519 None:intergenic 20.0%
!! TTTATTCTTCGAAATGATAA+AGG + Chr7:87770066-87770085 None:intergenic 20.0%
!!! AATGAAAATAACTTTTTCTG+AGG + Chr7:87769387-87769406 None:intergenic 20.0%
!!! AGTATTAGTAAATAGTTTTC+AGG - Chr7:87773488-87773507 MsG0780041183.01.T01:intron 20.0%
!!! ATAAAGCATTAGAAATCAAT+TGG + Chr7:87773187-87773206 None:intergenic 20.0%
!!! ATTAACTTTTTTTTTTTGCC+AGG - Chr7:87772002-87772021 MsG0780041183.01.T01:CDS 20.0%
!!! GGTTTAATTTCTAAAGTTTA+AGG - Chr7:87769498-87769517 MsG0780041183.01.T01:intron 20.0%
!!! TTCTTTTTAACTGTAATTCA+TGG - Chr7:87769689-87769708 MsG0780041183.01.T01:intron 20.0%
!!! TTTTATTGATTTTCCAATCA+GGG - Chr7:87770592-87770611 MsG0780041183.01.T01:CDS 20.0%
!!! TTTTTATTGATTTTCCAATC+AGG - Chr7:87770591-87770610 MsG0780041183.01.T01:CDS 20.0%
! AAATCATAATGCATGAAACT+AGG - Chr7:87773028-87773047 MsG0780041183.01.T01:intron 25.0%
! AATACGACAAATACAATCTA+AGG + Chr7:87772485-87772504 None:intergenic 25.0%
! AATGAGAATTGAAAAGCTTT+GGG + Chr7:87768457-87768476 None:intergenic 25.0%
! AGAAAAGAAAGGTTAAGATT+GGG - Chr7:87768501-87768520 MsG0780041183.01.T01:intron 25.0%
! AGGTCTAATAAGTAAAAGTA+CGG + Chr7:87770266-87770285 None:intergenic 25.0%
! AGTTAAACTATTGCTAAATC+TGG + Chr7:87771575-87771594 None:intergenic 25.0%
! ATTAACTCTTTCTAAGTTGT+TGG - Chr7:87769404-87769423 MsG0780041183.01.T01:intron 25.0%
! ATTACCATATGGTTAATGAT+GGG - Chr7:87771671-87771690 MsG0780041183.01.T01:intron 25.0%
! ATTCATCCTTAAGTATTAGT+AGG + Chr7:87770959-87770978 None:intergenic 25.0%
! ATTTAATGCAATGACACATT+TGG - Chr7:87771374-87771393 MsG0780041183.01.T01:intron 25.0%
! ATTTCAACATTTCTCTTACA+AGG - Chr7:87772205-87772224 MsG0780041183.01.T01:intron 25.0%
! ATTTGTGAAAAACTAAACCT+AGG + Chr7:87768614-87768633 None:intergenic 25.0%
! CTCTAAATTTCAGAAAAGAA+AGG - Chr7:87768490-87768509 MsG0780041183.01.T01:intron 25.0%
! GTCTAAACATAAAGTTGAAA+GGG + Chr7:87772882-87772901 None:intergenic 25.0%
! GTTAAACTATTGCTAAATCT+GGG + Chr7:87771574-87771593 None:intergenic 25.0%
! TACGCACTATAATTTATGAA+TGG - Chr7:87769057-87769076 MsG0780041183.01.T01:intron 25.0%
! TAGATTACATGATCTAGTAA+GGG - Chr7:87770893-87770912 MsG0780041183.01.T01:intron 25.0%
! TCATATCATAATGAAACTGA+AGG - Chr7:87773455-87773474 MsG0780041183.01.T01:intron 25.0%
! TCTAAACATAAAGTTGAAAG+GGG + Chr7:87772881-87772900 None:intergenic 25.0%
! TGATTTCTGTTCTGTTATAT+TGG - Chr7:87771112-87771131 MsG0780041183.01.T01:intron 25.0%
! TGTCTAAACATAAAGTTGAA+AGG + Chr7:87772883-87772902 None:intergenic 25.0%
! TTTCAACTTTATGTTTAGAC+AGG - Chr7:87772882-87772901 MsG0780041183.01.T01:intron 25.0%
! TTTCATGGTCGAAATTTATT+TGG + Chr7:87769563-87769582 None:intergenic 25.0%
! TTTGGGAAAAATCATAAACA+AGG + Chr7:87768440-87768459 None:intergenic 25.0%
! TTTGTGAAAAACTAAACCTA+GGG + Chr7:87768613-87768632 None:intergenic 25.0%
!! AGAATTCTCTGTAATTTTGA+TGG - Chr7:87772521-87772540 MsG0780041183.01.T01:intron 25.0%
!! ATTGTAATACCATTTTCTGA+AGG + Chr7:87772243-87772262 None:intergenic 25.0%
!! ATTTGTCGTATTTCTGTATT+TGG - Chr7:87772493-87772512 MsG0780041183.01.T01:intron 25.0%
!! TATCATTGATTATGTACAGT+AGG - Chr7:87769333-87769352 MsG0780041183.01.T01:intron 25.0%
!! TTGTTCTCACTAAATTTTGT+AGG - Chr7:87771311-87771330 MsG0780041183.01.T01:intron 25.0%
!! TTTTGCTCATAAACTTCTTA+AGG + Chr7:87770297-87770316 None:intergenic 25.0%
!!! ACAGATTTTTCAGAATTATG+AGG - Chr7:87772552-87772571 MsG0780041183.01.T01:intron 25.0%
!!! ATGAGTACTAATAGTTTGTT+TGG + Chr7:87768914-87768933 None:intergenic 25.0%
!!! ATTCTTCAACTCCATTTTTT+TGG + Chr7:87770381-87770400 None:intergenic 25.0%
!!! TACTAATAGTTTGTTTGGAT+AGG + Chr7:87768909-87768928 None:intergenic 25.0%
!!! TCTTATTTTGCATTACCATA+TGG - Chr7:87771660-87771679 MsG0780041183.01.T01:intron 25.0%
!!! TTCTATGCTTTATTTTGTGT+AGG - Chr7:87773426-87773445 MsG0780041183.01.T01:CDS 25.0%
!!! TTCTTAAGGTTGGTTTTTTA+TGG + Chr7:87770332-87770351 None:intergenic 25.0%
AACACCGAAGTTAAATCTAA+AGG - Chr7:87768554-87768573 MsG0780041183.01.T01:intron 30.0%
AACCAATAATCTTGAACAGT+TGG - Chr7:87772949-87772968 MsG0780041183.01.T01:intron 30.0%
AACTAAACCTAGGGAAATTA+TGG + Chr7:87768604-87768623 None:intergenic 30.0%
AAGTCTCTATAAATCACAGT+GGG + Chr7:87773142-87773161 None:intergenic 30.0%
AATATATCCACTGAAAACTG+GGG + Chr7:87772109-87772128 None:intergenic 30.0%
ACAGGACAAAGAAAAACTAA+AGG - Chr7:87772603-87772622 MsG0780041183.01.T01:intron 30.0%
AGAAAATAACTCCTGAACTA+TGG + Chr7:87772043-87772062 None:intergenic 30.0%
AGAATTATGAGGATATCCTA+AGG - Chr7:87772563-87772582 MsG0780041183.01.T01:intron 30.0%
AGATTACATGATCTAGTAAG+GGG - Chr7:87770894-87770913 MsG0780041183.01.T01:intron 30.0%
AGGATGTTGAATTTCTTTGT+TGG - Chr7:87770789-87770808 MsG0780041183.01.T01:intron 30.0%
AGTAAGTTGTTTATCCAAAC+AGG + Chr7:87768718-87768737 None:intergenic 30.0%
AGTCCTATTAAAGTTGCATA+GGG - Chr7:87770189-87770208 MsG0780041183.01.T01:intron 30.0%
ATAGCATAGATCTTATAGTC+AGG - Chr7:87773583-87773602 MsG0780041183.01.T01:CDS 30.0%
ATGGTCGAAATTTATTTGGT+TGG + Chr7:87769559-87769578 None:intergenic 30.0%
CAAATAATTACCCACTTATC+AGG - Chr7:87770706-87770725 MsG0780041183.01.T01:intron 30.0%
CAAATCTAATTAGTCGCAAT+GGG + Chr7:87770513-87770532 None:intergenic 30.0%
CAATATATCCACTGAAAACT+GGG + Chr7:87772110-87772129 None:intergenic 30.0%
CAGAAAAGAAAGGTTAAGAT+TGG - Chr7:87768500-87768519 MsG0780041183.01.T01:intron 30.0%
CATTACCATATGGTTAATGA+TGG - Chr7:87771670-87771689 MsG0780041183.01.T01:intron 30.0%
CATTAGAAATCAATTGGAGA+AGG + Chr7:87773181-87773200 None:intergenic 30.0%
CTTCATCAAAAGAGAGAAAA+CGG + Chr7:87771056-87771075 None:intergenic 30.0%
GAAAGAAAAATGAAGTTGAC+TGG - Chr7:87769614-87769633 MsG0780041183.01.T01:intron 30.0%
GAAATACAATACATTGTCTC+TGG - Chr7:87769477-87769496 MsG0780041183.01.T01:intron 30.0%
GAATGAGAATTGAAAAGCTT+TGG + Chr7:87768458-87768477 None:intergenic 30.0%
GAATTATATGCATTCGTAGT+CGG - Chr7:87772907-87772926 MsG0780041183.01.T01:intron 30.0%
GAGGATAATATTCAAGAGTA+AGG + Chr7:87771437-87771456 None:intergenic 30.0%
GTAGATTACATGATCTAGTA+AGG - Chr7:87770892-87770911 MsG0780041183.01.T01:intron 30.0%
TAAAGTTTAAGGAATGACAG+AGG - Chr7:87769509-87769528 MsG0780041183.01.T01:intron 30.0%
TACCAAACTCATTTACTTGA+TGG + Chr7:87770855-87770874 None:intergenic 30.0%
TACCATCAAGTAAATGAGTT+TGG - Chr7:87770850-87770869 MsG0780041183.01.T01:intron 30.0%
TACTACATTGTTTAATGCCA+GGG - Chr7:87773515-87773534 MsG0780041183.01.T01:intron 30.0%
TCTCAACCTACTAATACTTA+AGG - Chr7:87770950-87770969 MsG0780041183.01.T01:intron 30.0%
TGAAATATAAATGTGCCCTA+AGG + Chr7:87768654-87768673 None:intergenic 30.0%
TGAATCTCTTTCTTACAACA+TGG + Chr7:87772085-87772104 None:intergenic 30.0%
TTACTACATTGTTTAATGCC+AGG - Chr7:87773514-87773533 MsG0780041183.01.T01:intron 30.0%
TTATGAGCAAAAATCTATGC+AGG - Chr7:87770305-87770324 MsG0780041183.01.T01:intron 30.0%
TTATGGGATTGATAAGAAGT+CGG - Chr7:87773614-87773633 MsG0780041183.01.T01:five_prime_UTR 30.0%
TTCGATATGTTCTATTCAAC+TGG - Chr7:87772374-87772393 MsG0780041183.01.T01:intron 30.0%
TTCTCTTTATGTTGAAGTGT+GGG + Chr7:87770444-87770463 None:intergenic 30.0%
TTGAAACCAAACTATATCCT+CGG + Chr7:87771205-87771224 None:intergenic 30.0%
TTTGCATGGTTATCTGTAAT+TGG - Chr7:87772312-87772331 MsG0780041183.01.T01:intron 30.0%
! AAACTAAAGGATGCTTTTAC+CGG - Chr7:87772616-87772635 MsG0780041183.01.T01:intron 30.0%
! AAACTTTTGTCAGCACAATA+GGG + Chr7:87771014-87771033 None:intergenic 30.0%
! AGTCAAACCTTTCTTGTTTA+CGG + Chr7:87769201-87769220 None:intergenic 30.0%
! ATGTTCGAGTTTCTTTCAAA+TGG + Chr7:87770563-87770582 None:intergenic 30.0%
! CTTTTCTTCTTATGCAGAAA+AGG - Chr7:87771461-87771480 MsG0780041183.01.T01:intron 30.0%
! GAATGTGTTTCAATTTTGCA+TGG - Chr7:87772298-87772317 MsG0780041183.01.T01:intron 30.0%
! GGTACCTTTAGATTTAACTT+CGG + Chr7:87768561-87768580 None:intergenic 30.0%
! GTTTGTTGAAAAACTGATGT+TGG - Chr7:87771030-87771049 MsG0780041183.01.T01:intron 30.0%
! GTTTTTCTTTGTCCTGTAAA+TGG + Chr7:87772600-87772619 None:intergenic 30.0%
! TAGAAGGAAGCATACAAAAT+AGG - Chr7:87771800-87771819 MsG0780041183.01.T01:intron 30.0%
! TGTACAGTAGGAATTTTGTA+TGG - Chr7:87769345-87769364 MsG0780041183.01.T01:intron 30.0%
!! AAGAGGTATATTCATTTTGC+TGG - Chr7:87769268-87769287 MsG0780041183.01.T01:intron 30.0%
!! AGAAACTGATTTGCAAAAGA+AGG - Chr7:87772678-87772697 MsG0780041183.01.T01:CDS 30.0%
!! CATTTGTTTCTTTTACCTTC+TGG - Chr7:87773768-87773787 MsG0780041183.01.T01:five_prime_UTR 30.0%
!! TCTTTCTAAGTTGTTGGTTT+GGG - Chr7:87769410-87769429 MsG0780041183.01.T01:intron 30.0%
!! TGCAATGTTATTGTTGATTC+AGG + Chr7:87772749-87772768 None:intergenic 30.0%
!! TTTGCAAAAGAAGGTATCTT+TGG - Chr7:87772687-87772706 MsG0780041183.01.T01:CDS 30.0%
!!! AACTTTTTTTTTTTGCCAGG+AGG - Chr7:87772005-87772024 MsG0780041183.01.T01:CDS 30.0%
!!! TTTTTCTTGGATTTGGCTTT+GGG + Chr7:87768355-87768374 None:intergenic 30.0%
AAACATAGCATCCTGATAAG+TGG + Chr7:87770720-87770739 None:intergenic 35.0%
AAAGAAAGGTTAAGATTGGG+AGG - Chr7:87768504-87768523 MsG0780041183.01.T01:intron 35.0%
AACATAGCATCCTGATAAGT+GGG + Chr7:87770719-87770738 None:intergenic 35.0%
AAGCAGAAAAAGCAGTTAGA+AGG - Chr7:87771784-87771803 MsG0780041183.01.T01:intron 35.0%
AATATAAATGTGCCCTAAGG+TGG + Chr7:87768651-87768670 None:intergenic 35.0%
ACTGTTAAGTGGAATTAGTG+GGG - Chr7:87771924-87771943 MsG0780041183.01.T01:intron 35.0%
AGTTGAATAGAACTCAGTGT+AGG + Chr7:87772417-87772436 None:intergenic 35.0%
ATAACTCCTGAACTATGGAA+TGG + Chr7:87772038-87772057 None:intergenic 35.0%
ATACCGATATCCACACATAA+AGG + Chr7:87769316-87769335 None:intergenic 35.0%
ATCCCCTATGCAACTTTAAT+AGG + Chr7:87770195-87770214 None:intergenic 35.0%
ATGAAGTTGACTGGTAATCA+TGG - Chr7:87769623-87769642 MsG0780041183.01.T01:intron 35.0%
ATGCCTTTATGTGTGGATAT+CGG - Chr7:87769310-87769329 MsG0780041183.01.T01:intron 35.0%
ATTACATGATCTAGTAAGGG+GGG - Chr7:87770896-87770915 MsG0780041183.01.T01:intron 35.0%
CCATCAATGCATCTGTATTT+GGG + Chr7:87769834-87769853 None:intergenic 35.0%
CTTATCAATCCCATAAACGA+AGG + Chr7:87773610-87773629 None:intergenic 35.0%
CTTCTCTTTATGTTGAAGTG+TGG + Chr7:87770445-87770464 None:intergenic 35.0%
GAAGTCTCTATAAATCACAG+TGG + Chr7:87773143-87773162 None:intergenic 35.0%
GACTGTTAAGTGGAATTAGT+GGG - Chr7:87771923-87771942 MsG0780041183.01.T01:intron 35.0%
GAGTCCTATTAAAGTTGCAT+AGG - Chr7:87770188-87770207 MsG0780041183.01.T01:intron 35.0%
GATTACATGATCTAGTAAGG+GGG - Chr7:87770895-87770914 MsG0780041183.01.T01:intron 35.0%
GCAAATCTAATTAGTCGCAA+TGG + Chr7:87770514-87770533 None:intergenic 35.0%
GCAATATATCCACTGAAAAC+TGG + Chr7:87772111-87772130 None:intergenic 35.0%
GCACTTCATGATTACTTGAA+GGG - Chr7:87769645-87769664 MsG0780041183.01.T01:intron 35.0%
GCTCATAAACTTCTTAAGGT+TGG + Chr7:87770293-87770312 None:intergenic 35.0%
GCTGATCACTTCTTTATTGA+TGG - Chr7:87771344-87771363 MsG0780041183.01.T01:intron 35.0%
GGCATATTGAATGCATAGAA+TGG - Chr7:87772970-87772989 MsG0780041183.01.T01:intron 35.0%
GTAACCCATCATTAACCATA+TGG + Chr7:87771678-87771697 None:intergenic 35.0%
GTCCTATTAAAGTTGCATAG+GGG - Chr7:87770190-87770209 MsG0780041183.01.T01:intron 35.0%
GTTTAAGCTATAAGCAGTGA+CGG + Chr7:87768253-87768272 None:intergenic 35.0%
GTTTGAGTCTTGAGATGTTA+TGG + Chr7:87773104-87773123 None:intergenic 35.0%
TACACTGAGTTCTATTCAAC+TGG - Chr7:87772416-87772435 MsG0780041183.01.T01:intron 35.0%
TCACAGTGGGAAAAAAAAGT+AGG + Chr7:87773129-87773148 None:intergenic 35.0%
TCAGTTTCTTCTATGTTCCA+TGG + Chr7:87772667-87772686 None:intergenic 35.0%
TCATTTCCATTCCATAGTTC+AGG - Chr7:87772029-87772048 MsG0780041183.01.T01:CDS 35.0%
TCTGCATAAGAAGAAAAGCA+AGG + Chr7:87771459-87771478 None:intergenic 35.0%
TGACTGTTAAGTGGAATTAG+TGG - Chr7:87771922-87771941 MsG0780041183.01.T01:intron 35.0%
TGATTTCCGAGGATATAGTT+TGG - Chr7:87771196-87771215 MsG0780041183.01.T01:intron 35.0%
TGCCAACTGTTCAAGATTAT+TGG + Chr7:87772954-87772973 None:intergenic 35.0%
TGTTTAGATGCCTTTATGTG+TGG - Chr7:87769303-87769322 MsG0780041183.01.T01:intron 35.0%
TTCATGATTACTTGAAGGGT+TGG - Chr7:87769649-87769668 MsG0780041183.01.T01:intron 35.0%
TTCCAAAAGCTTGTGAAACT+AGG - Chr7:87768691-87768710 MsG0780041183.01.T01:CDS 35.0%
TTTATGAGCAAAACCTATGC+AGG - Chr7:87770353-87770372 MsG0780041183.01.T01:intron 35.0%
! AATCTTGAAGGGAAGTCTTT+TGG - Chr7:87773540-87773559 MsG0780041183.01.T01:intron 35.0%
! AGATGCATTGATGGGTATTA+AGG - Chr7:87769840-87769859 MsG0780041183.01.T01:intron 35.0%
! ATTTGAATGCTTGACTAGCT+TGG + Chr7:87769734-87769753 None:intergenic 35.0%
! CAAACTTTTGTCAGCACAAT+AGG + Chr7:87771015-87771034 None:intergenic 35.0%
! CCAAATACAGATGCATTGAT+GGG - Chr7:87769832-87769851 MsG0780041183.01.T01:intron 35.0%
! CTCTTTCTAAGTTGTTGGTT+TGG - Chr7:87769409-87769428 MsG0780041183.01.T01:intron 35.0%
! GATTTTACCTAGTTGCAAAG+AGG - Chr7:87769990-87770009 MsG0780041183.01.T01:intron 35.0%
! TTATGCAACACTAGTTCTTC+TGG + Chr7:87769883-87769902 None:intergenic 35.0%
!! ACTTTTTCTGAGGATTCTAC+AGG + Chr7:87769377-87769396 None:intergenic 35.0%
!! ATGGTTAATGATGGGTTACT+GGG - Chr7:87771679-87771698 MsG0780041183.01.T01:intron 35.0%
!! CTTTTTCTTGGATTTGGCTT+TGG + Chr7:87768356-87768375 None:intergenic 35.0%
!! TATGGTTAATGATGGGTTAC+TGG - Chr7:87771678-87771697 MsG0780041183.01.T01:intron 35.0%
!! TCCTTTAAAGTGAGCAAGTA+CGG + Chr7:87770985-87771004 None:intergenic 35.0%
!! TCTCTGTAATTTTGATGGCA+TGG - Chr7:87772526-87772545 MsG0780041183.01.T01:intron 35.0%
!! TGTTCTGTTATATTGGCTTC+TGG - Chr7:87771119-87771138 MsG0780041183.01.T01:intron 35.0%
!! TTGTTTCTTTTACCTTCTGG+AGG - Chr7:87773771-87773790 MsG0780041183.01.T01:five_prime_UTR 35.0%
!! TTTGAATGCTTGACTAGCTT+GGG + Chr7:87769733-87769752 None:intergenic 35.0%
AAAGGGGAAACGAAAGAACA+AGG + Chr7:87772865-87772884 None:intergenic 40.0%
AAGTAAAGAAGAGGAGTGGA+AGG - Chr7:87771744-87771763 MsG0780041183.01.T01:intron 40.0%
AATTAGTGGGGCTGAGTATT+GGG - Chr7:87771936-87771955 MsG0780041183.01.T01:intron 40.0%
AATTGCTGTGGGAAACACAT+TGG + Chr7:87769135-87769154 None:intergenic 40.0%
ACCGTACTTGCTCACTTTAA+AGG - Chr7:87770981-87771000 MsG0780041183.01.T01:intron 40.0%
AGAAAATGATACCATACGCG+AGG - Chr7:87770160-87770179 MsG0780041183.01.T01:intron 40.0%
AGCATACAAAATAGGACAGG+TGG - Chr7:87771808-87771827 MsG0780041183.01.T01:intron 40.0%
AGGAATGACAGAGGTCTATT+TGG - Chr7:87769518-87769537 MsG0780041183.01.T01:intron 40.0%
AGTAAAGAAGAGGAGTGGAA+GGG - Chr7:87771745-87771764 MsG0780041183.01.T01:intron 40.0%
ATAGTCAGGTCCTTCGTTTA+TGG - Chr7:87773597-87773616 MsG0780041183.01.T01:exon 40.0%
ATCTAATTAGTCGCAATGGG+TGG + Chr7:87770510-87770529 None:intergenic 40.0%
ATGTTGAAGTGTGGGTGATT+TGG + Chr7:87770436-87770455 None:intergenic 40.0%
ATTCAACATCCTTCGTAGAG+AGG + Chr7:87770781-87770800 None:intergenic 40.0%
CACAATGCAAAAGTTCGAAG+AGG - Chr7:87769251-87769270 MsG0780041183.01.T01:intron 40.0%
CAGTGGGAAAAAAAAGTAGG+TGG + Chr7:87773126-87773145 None:intergenic 40.0%
CATTGGCGATGATGATAAAG+TGG - Chr7:87769933-87769952 MsG0780041183.01.T01:intron 40.0%
CCCAAATACAGATGCATTGA+TGG - Chr7:87769831-87769850 MsG0780041183.01.T01:intron 40.0%
CCCATCAATGCATCTGTATT+TGG + Chr7:87769835-87769854 None:intergenic 40.0%
CTATGCAGGCACCAAAAAAA+TGG - Chr7:87770367-87770386 MsG0780041183.01.T01:intron 40.0%
CTTGCACTTATTGTGTGTGA+CGG + Chr7:87769033-87769052 None:intergenic 40.0%
CTTTGTCCTGTAAATGGTAC+TGG + Chr7:87772594-87772613 None:intergenic 40.0%
GAAGAACCAGTACCATTTAC+AGG - Chr7:87772585-87772604 MsG0780041183.01.T01:intron 40.0%
GAAGGTGACAAGTAAAGAAG+AGG - Chr7:87771735-87771754 MsG0780041183.01.T01:intron 40.0%
GATAACTCTATGAGCTCTAC+TGG - Chr7:87773259-87773278 MsG0780041183.01.T01:intron 40.0%
GCATAAGAAGAAAAGCAAGG+AGG + Chr7:87771456-87771475 None:intergenic 40.0%
GCCAAATCCAAGAAAAAGAG+CGG - Chr7:87768358-87768377 MsG0780041183.01.T01:CDS 40.0%
GGCACTTCATGATTACTTGA+AGG - Chr7:87769644-87769663 MsG0780041183.01.T01:intron 40.0%
GGTTTAGCCGTAAACAAGAA+AGG - Chr7:87769191-87769210 MsG0780041183.01.T01:intron 40.0%
GTAGGATAACGAAATGAGAG+AGG - Chr7:87771894-87771913 MsG0780041183.01.T01:intron 40.0%
GTGGCAGTAAATAGATGAGA+GGG - Chr7:87771827-87771846 MsG0780041183.01.T01:intron 40.0%
GTGTGTAACAGTGTAGTTTG+CGG + Chr7:87768164-87768183 None:intergenic 40.0%
TAGTCAGGTCCTTCGTTTAT+GGG - Chr7:87773598-87773617 MsG0780041183.01.T01:exon 40.0%
TCAATGCATCTGTATTTGGG+TGG + Chr7:87769831-87769850 None:intergenic 40.0%
TCCCACAGCAATTATTCTTC+CGG - Chr7:87769142-87769161 MsG0780041183.01.T01:intron 40.0%
TCCGGAAGAATAATTGCTGT+GGG + Chr7:87769146-87769165 None:intergenic 40.0%
TCTAATTAGTCGCAATGGGT+GGG + Chr7:87770509-87770528 None:intergenic 40.0%
TGACAAGTAAAGAAGAGGAG+TGG - Chr7:87771740-87771759 MsG0780041183.01.T01:intron 40.0%
TGGCAGTAAATAGATGAGAG+GGG - Chr7:87771828-87771847 MsG0780041183.01.T01:intron 40.0%
TTGTGAAACTAGGTCCTGTT+TGG - Chr7:87768701-87768720 MsG0780041183.01.T01:CDS 40.0%
TTTGTTGCATTCTTAGGTGG+AGG + Chr7:87768536-87768555 None:intergenic 40.0%
! AAAGGATGCTTTTACCGGAT+TGG - Chr7:87772621-87772640 MsG0780041183.01.T01:intron 40.0%
! AACTTCTTAAGGTTGGCTCT+AGG + Chr7:87770286-87770305 None:intergenic 40.0%
! AGGATGCTATGTTTTTCCTG+TGG - Chr7:87770726-87770745 MsG0780041183.01.T01:intron 40.0%
! GACCTAGTTTCACAAGCTTT+TGG + Chr7:87768696-87768715 None:intergenic 40.0%
! GATGCTATGTTTTTCCTGTG+GGG - Chr7:87770728-87770747 MsG0780041183.01.T01:intron 40.0%
! GGAAGCATACAAAATAGGAC+AGG - Chr7:87771805-87771824 MsG0780041183.01.T01:intron 40.0%
! GGATGCTATGTTTTTCCTGT+GGG - Chr7:87770727-87770746 MsG0780041183.01.T01:intron 40.0%
! GGGAGAGTTGTATTTTCAGT+AGG - Chr7:87771876-87771895 MsG0780041183.01.T01:intron 40.0%
! GTGTTTGTTGCATTCTTAGG+TGG + Chr7:87768539-87768558 None:intergenic 40.0%
! TCGCGTATGGTATCATTTTC+TGG + Chr7:87770161-87770180 None:intergenic 40.0%
! TCGGTGTTTGTTGCATTCTT+AGG + Chr7:87768542-87768561 None:intergenic 40.0%
! TGGCTTCTGGTTATTGTGTT+CGG - Chr7:87771132-87771151 MsG0780041183.01.T01:intron 40.0%
!! AATGGTACTGGTTCTTCCTT+AGG + Chr7:87772582-87772601 None:intergenic 40.0%
!! GAAAGTACCTCTTTGCAACT+AGG + Chr7:87770000-87770019 None:intergenic 40.0%
!! GTTTTGTTGCGGTTAATGGT+GGG + Chr7:87768229-87768248 None:intergenic 40.0%
!! TCTTCAGTCATTGATTTCCG+AGG - Chr7:87771185-87771204 MsG0780041183.01.T01:intron 40.0%
!! TGTTTTGTTGCGGTTAATGG+TGG + Chr7:87768230-87768249 None:intergenic 40.0%
!!! CATTTTTTTGGTGCCTGCAT+AGG + Chr7:87770369-87770388 None:intergenic 40.0%
AAGTGCCTGAATCTAACGAC+AGG + Chr7:87773006-87773025 None:intergenic 45.0%
AATGCCAGGGAGAATCTTGA+AGG - Chr7:87773528-87773547 MsG0780041183.01.T01:intron 45.0%
ACTGTGTTACCACCAACTGA+AGG + Chr7:87771714-87771733 None:intergenic 45.0%
AGGGAAATTATGGAGCGAAG+AGG + Chr7:87768594-87768613 None:intergenic 45.0%
AGGGCATGGTCTTTCACAAA+AGG - Chr7:87773737-87773756 MsG0780041183.01.T01:five_prime_UTR 45.0%
ATGCATCTGTATTTGGGTGG+AGG + Chr7:87769828-87769847 None:intergenic 45.0%
ATGCCAGGGAGAATCTTGAA+GGG - Chr7:87773529-87773548 MsG0780041183.01.T01:intron 45.0%
CAATGCCTGTCGTTAGATTC+AGG - Chr7:87772998-87773017 MsG0780041183.01.T01:intron 45.0%
CACATTTGGCAGCTGACATT+CGG - Chr7:87771388-87771407 MsG0780041183.01.T01:intron 45.0%
CTAATTAGTCGCAATGGGTG+GGG + Chr7:87770508-87770527 None:intergenic 45.0%
CTCCGGAAGAATAATTGCTG+TGG + Chr7:87769147-87769166 None:intergenic 45.0%
CTTCGCTCCATAATTTCCCT+AGG - Chr7:87768594-87768613 MsG0780041183.01.T01:intron 45.0%
GAATGCACAAGTTCTCAAGG+TGG - Chr7:87773636-87773655 MsG0780041183.01.T01:five_prime_UTR 45.0%
GAATTAGTGGGGCTGAGTAT+TGG - Chr7:87771935-87771954 MsG0780041183.01.T01:intron 45.0%
GAGCGAAGAGGATATGACTT+TGG + Chr7:87768582-87768601 None:intergenic 45.0%
GAGGTGTGATGACTGTTAAG+TGG - Chr7:87771913-87771932 MsG0780041183.01.T01:intron 45.0%
GGCAGTAAATAGATGAGAGG+GGG - Chr7:87771829-87771848 MsG0780041183.01.T01:intron 45.0%
GGTGGCAGTAAATAGATGAG+AGG - Chr7:87771826-87771845 MsG0780041183.01.T01:intron 45.0%
TCGGAATGCACAAGTTCTCA+AGG - Chr7:87773633-87773652 MsG0780041183.01.T01:five_prime_UTR 45.0%
TGCCCTAAGGTGGAAAACTA+GGG + Chr7:87768641-87768660 None:intergenic 45.0%
TGGAATGGAAATGAACCTCC+TGG + Chr7:87772023-87772042 None:intergenic 45.0%
TTGTCAGCACAATAGGGCAA+TGG + Chr7:87771008-87771027 None:intergenic 45.0%
! ATTAGTGGGGCTGAGTATTG+GGG - Chr7:87771937-87771956 MsG0780041183.01.T01:intron 45.0%
! CTATGTTTTTCCTGTGGGGT+GGG - Chr7:87770732-87770751 MsG0780041183.01.T01:intron 45.0%
! GATTCATCCCCAGTTTTCAG+TGG - Chr7:87772099-87772118 MsG0780041183.01.T01:intron 45.0%
! GCCGCTCTTTTTCTTGGATT+TGG + Chr7:87768362-87768381 None:intergenic 45.0%
! TCAATGCGATTAGCCCTGAT+TGG + Chr7:87770608-87770627 None:intergenic 45.0%
! TTTTGTGAAAGACCATGCCC+TGG + Chr7:87773738-87773757 None:intergenic 45.0%
!! AAGCCCTAGTTTTCCACCTT+AGG - Chr7:87768635-87768654 MsG0780041183.01.T01:intron 45.0%
!! AGCCCTAGTTTTCCACCTTA+GGG - Chr7:87768636-87768655 MsG0780041183.01.T01:intron 45.0%
!! AGGGAAGTCTTTTGGCTGTA+TGG - Chr7:87773548-87773567 MsG0780041183.01.T01:intron 45.0%
!! CGGTGTTTTGTTGCGGTTAA+TGG + Chr7:87768233-87768252 None:intergenic 45.0%
!! GATGGGTTACTGGGCTTATT+GGG - Chr7:87771688-87771707 MsG0780041183.01.T01:intron 45.0%
!! GTTGGTGGTAACACAGTTGA+AGG - Chr7:87771717-87771736 MsG0780041183.01.T01:intron 45.0%
!! TGATGGGTTACTGGGCTTAT+TGG - Chr7:87771687-87771706 MsG0780041183.01.T01:intron 45.0%
!!! AGTACGGCGCTGCTTTTTTT+AGG + Chr7:87770250-87770269 None:intergenic 45.0%
AAAGACCATGCCCTGGATCA+AGG + Chr7:87773731-87773750 None:intergenic 50.0%
AAATAGATGAGAGGGGGACG+TGG - Chr7:87771835-87771854 MsG0780041183.01.T01:intron 50.0%
AAGAAGAGGAGTGGAAGGGT+AGG - Chr7:87771749-87771768 MsG0780041183.01.T01:intron 50.0%
AAGACCATGCCCTGGATCAA+GGG + Chr7:87773730-87773749 None:intergenic 50.0%
AAGCTGAGGAATGGCCGTAA+GGG + Chr7:87768198-87768217 None:intergenic 50.0%
AATAGATGAGAGGGGGACGT+GGG - Chr7:87771836-87771855 MsG0780041183.01.T01:intron 50.0%
AGTGTAGCAGCTGATAAGGC+AGG - Chr7:87769170-87769189 MsG0780041183.01.T01:intron 50.0%
CTTATTGGGCCTTCAGTTGG+TGG - Chr7:87771702-87771721 MsG0780041183.01.T01:intron 50.0%
CTTCCCTTCAAGATTCTCCC+TGG + Chr7:87773535-87773554 None:intergenic 50.0%
GAAAAACTTCGCGAGCGCAT+TGG - Chr7:87769916-87769935 MsG0780041183.01.T01:intron 50.0%
GCAGAGTGTAGCAGCTGATA+AGG - Chr7:87769166-87769185 MsG0780041183.01.T01:intron 50.0%
GTGCCCTAAGGTGGAAAACT+AGG + Chr7:87768642-87768661 None:intergenic 50.0%
TGCACAAGTTCTCAAGGTGG+AGG - Chr7:87773639-87773658 MsG0780041183.01.T01:five_prime_UTR 50.0%
TGCATTCGTAGTCGGAACTC+AGG - Chr7:87772915-87772934 MsG0780041183.01.T01:intron 50.0%
TGGAGGCGATGTAGCTGTAT+GGG - Chr7:87773656-87773675 MsG0780041183.01.T01:five_prime_UTR 50.0%
TGTTCCATGGCAAGAGTGAC+AGG + Chr7:87772654-87772673 None:intergenic 50.0%
TTCGTCATGCCTCTCTACGA+AGG - Chr7:87770769-87770788 MsG0780041183.01.T01:intron 50.0%
! AACGACGCCGCTCTTTTTCT+TGG + Chr7:87768368-87768387 None:intergenic 50.0%
! CTCTTTTCCCCCTTGATCCA+GGG - Chr7:87773718-87773737 MsG0780041183.01.T01:five_prime_UTR 50.0%
! GCTATGTTTTTCCTGTGGGG+TGG - Chr7:87770731-87770750 MsG0780041183.01.T01:intron 50.0%
! TTGTTGCGGTTAATGGTGGG+AGG + Chr7:87768226-87768245 None:intergenic 50.0%
!! CTTTGGGACGAGTCATCTTG+CGG + Chr7:87768339-87768358 None:intergenic 50.0%
!! GCAATGGGTGGGGTTGTTTT+GGG + Chr7:87770498-87770517 None:intergenic 50.0%
!! GCAGTGACGGTGTTTTGTTG+CGG + Chr7:87768240-87768259 None:intergenic 50.0%
!!! GAGCGGCGTCGTTGATTTTA+AGG - Chr7:87768375-87768394 MsG0780041183.01.T01:CDS 50.0%
ACGTGGGATTCTTGGAGGGA+GGG - Chr7:87771852-87771871 MsG0780041183.01.T01:intron 55.0%
AGACCATGCCCTGGATCAAG+GGG + Chr7:87773729-87773748 None:intergenic 55.0%
AGGAGTGGAAGGGTAGGATG+TGG - Chr7:87771755-87771774 MsG0780041183.01.T01:intron 55.0%
ATGGCCGTAAGGGAGAAGAG+AGG + Chr7:87768188-87768207 None:intergenic 55.0%
CACGCCTCTCTTCTCCCTTA+CGG - Chr7:87768181-87768200 MsG0780041183.01.T01:CDS 55.0%
CCTGGATCAAGGGGGAAAAG+AGG + Chr7:87773720-87773739 None:intergenic 55.0%
GAAGCTGAGGAATGGCCGTA+AGG + Chr7:87768199-87768218 None:intergenic 55.0%
GAGGACTCGAAGCTGAGGAA+TGG + Chr7:87768207-87768226 None:intergenic 55.0%
GGAAGGGTAGGATGTGGGAT+TGG - Chr7:87771761-87771780 MsG0780041183.01.T01:intron 55.0%
GGAGTGGAAGGGTAGGATGT+GGG - Chr7:87771756-87771775 MsG0780041183.01.T01:intron 55.0%
GGCAGCTGACATTCGGTTCA+TGG - Chr7:87771395-87771414 MsG0780041183.01.T01:intron 55.0%
GGCGGTTCCAATCTCAACGT+GGG - Chr7:87771958-87771977 MsG0780041183.01.T01:CDS 55.0%
GGGCTTATTGGGCCTTCAGT+TGG - Chr7:87771699-87771718 MsG0780041183.01.T01:intron 55.0%
GTGGAGGCGATGTAGCTGTA+TGG - Chr7:87773655-87773674 MsG0780041183.01.T01:five_prime_UTR 55.0%
TCAGCTGCTACACTCTGCTC+CGG + Chr7:87769164-87769183 None:intergenic 55.0%
TGACAGGCAGCGAACCAATC+CGG + Chr7:87772638-87772657 None:intergenic 55.0%
! CCTCTTTTCCCCCTTGATCC+AGG - Chr7:87773717-87773736 MsG0780041183.01.T01:five_prime_UTR 55.0%
! CGCAATGGGTGGGGTTGTTT+TGG + Chr7:87770499-87770518 None:intergenic 55.0%
! TGTTTTTCCTGTGGGGTGGG+TGG - Chr7:87770735-87770754 MsG0780041183.01.T01:intron 55.0%
!! GAGAGCACCCACGTTGAGAT+TGG + Chr7:87771968-87771987 None:intergenic 55.0%
!!! GGTGGGGTTGTTTTGGGAGT+AGG + Chr7:87770492-87770511 None:intergenic 55.0%
AGAGGGGGACGTGGGATTCT+TGG - Chr7:87771844-87771863 MsG0780041183.01.T01:intron 60.0%
CGTGGGATTCTTGGAGGGAG+GGG - Chr7:87771853-87771872 MsG0780041183.01.T01:intron 60.0%
GACCATGCCCTGGATCAAGG+GGG + Chr7:87773728-87773747 None:intergenic 60.0%
GACGTGGGATTCTTGGAGGG+AGG - Chr7:87771851-87771870 MsG0780041183.01.T01:intron 60.0%
GCTGCCTGTCACTCTTGCCA+TGG - Chr7:87772647-87772666 MsG0780041183.01.T01:intron 60.0%
GGACTCGTGATCCTCGCGTA+TGG + Chr7:87770174-87770193 None:intergenic 60.0%
GGGCGGTTCCAATCTCAACG+TGG - Chr7:87771957-87771976 MsG0780041183.01.T01:CDS 60.0%
GGGGACGTGGGATTCTTGGA+GGG - Chr7:87771848-87771867 MsG0780041183.01.T01:intron 60.0%
GTGGGATTCTTGGAGGGAGG+GGG - Chr7:87771854-87771873 MsG0780041183.01.T01:intron 60.0%
GTGTGTGCGTGTGCGTGTGT+GGG + Chr7:87770103-87770122 None:intergenic 60.0%
TGGGATTCTTGGAGGGAGGG+GGG - Chr7:87771855-87771874 MsG0780041183.01.T01:intron 60.0%
TGTGTGCGTGTGCGTGTGTG+GGG + Chr7:87770102-87770121 None:intergenic 60.0%
TGTGTGTGCGTGTGCGTGTG+TGG + Chr7:87770104-87770123 None:intergenic 60.0%
TTCCCCCTTGATCCAGGGCA+TGG - Chr7:87773723-87773742 MsG0780041183.01.T01:five_prime_UTR 60.0%
!! AGTGGGGCTGAGTATTGGGG+CGG - Chr7:87771940-87771959 MsG0780041183.01.T01:CDS 60.0%
GGGATTCTTGGAGGGAGGGG+GGG - Chr7:87771856-87771875 MsG0780041183.01.T01:intron 65.0%
GGGGGACGTGGGATTCTTGG+AGG - Chr7:87771847-87771866 MsG0780041183.01.T01:intron 65.0%
GGTGGGAGGACTCGAAGCTG+AGG + Chr7:87768212-87768231 None:intergenic 65.0%
GTGTGCGTGTGCGTGTGTGG+GGG + Chr7:87770101-87770120 None:intergenic 65.0%
TGATGCACCACCCACCCCAC+AGG + Chr7:87770745-87770764 None:intergenic 65.0%
TGTGCGTGTGCGTGTGTGGG+GGG + Chr7:87770100-87770119 None:intergenic 65.0%
GTGCGTGTGCGTGTGTGGGG+GGG + Chr7:87770099-87770118 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 87768149 87773800 87768149 ID=MsG0780041183.01;Name=MsG0780041183.01
Chr7 mRNA 87768149 87773800 87768149 ID=MsG0780041183.01.T01;Parent=MsG0780041183.01;Name=MsG0780041183.01.T01;_AED=0.45;_eAED=0.47;_QI=194|0.83|0.85|1|0.83|0.85|7|0|327
Chr7 exon 87768149 87768501 87768149 ID=MsG0780041183.01.T01:exon:12130;Parent=MsG0780041183.01.T01
Chr7 exon 87768669 87768729 87768669 ID=MsG0780041183.01.T01:exon:12129;Parent=MsG0780041183.01.T01
Chr7 exon 87770467 87770616 87770467 ID=MsG0780041183.01.T01:exon:12128;Parent=MsG0780041183.01.T01
Chr7 exon 87771938 87772107 87771938 ID=MsG0780041183.01.T01:exon:12127;Parent=MsG0780041183.01.T01
Chr7 exon 87772677 87772799 87772677 ID=MsG0780041183.01.T01:exon:12126;Parent=MsG0780041183.01.T01
Chr7 exon 87773374 87773446 87773374 ID=MsG0780041183.01.T01:exon:12125;Parent=MsG0780041183.01.T01
Chr7 exon 87773553 87773800 87773553 ID=MsG0780041183.01.T01:exon:12124;Parent=MsG0780041183.01.T01
Chr7 five_prime_UTR 87773607 87773800 87773607 ID=MsG0780041183.01.T01:five_prime_utr;Parent=MsG0780041183.01.T01
Chr7 CDS 87773553 87773606 87773553 ID=MsG0780041183.01.T01:cds;Parent=MsG0780041183.01.T01
Chr7 CDS 87773374 87773446 87773374 ID=MsG0780041183.01.T01:cds;Parent=MsG0780041183.01.T01
Chr7 CDS 87772677 87772799 87772677 ID=MsG0780041183.01.T01:cds;Parent=MsG0780041183.01.T01
Chr7 CDS 87771938 87772107 87771938 ID=MsG0780041183.01.T01:cds;Parent=MsG0780041183.01.T01
Chr7 CDS 87770467 87770616 87770467 ID=MsG0780041183.01.T01:cds;Parent=MsG0780041183.01.T01
Chr7 CDS 87768669 87768729 87768669 ID=MsG0780041183.01.T01:cds;Parent=MsG0780041183.01.T01
Chr7 CDS 87768149 87768501 87768149 ID=MsG0780041183.01.T01:cds;Parent=MsG0780041183.01.T01
Gene Sequence

>MsG0780041183.01.T01

ATGACTCGTCCCAAAGCCAAATCCAAGAAAAAGAGCGGCGTCGTTGATTTTAAGAAAAGAAAGGTTAAGATTGGGAGGAAACTGCCTCCACCTAAGAATGCAACAAACACCGAAGTTAAATCTAAAGCAATTATTCTTCCGGAGCAGAGTGTAGCAGCTGATAAGGCAGGTTTAGCCGTAAACAAGAAAGGTTTGACTTTAAAAGAACTTCTTAGTCAAACATCTCATCACAATGCAAAAGTTCGAAGAGATGCATTGATGGGTATTAAGGATTTATTCAGTAAACATCCAGAAGAACTAGTGTTGCATAAGTATCGTGTTGTAGAAAAACTTCGCGAGCGCATTGGCGATGATGATAAAGTGGTTCGCAGATCATTATATGATCTTTTTAAACTAGTGATTTTACCTAGTTGCAAAGAGGATAATCAAGAGCTGATCACTTCTTTATTGATGGCTTACATATTTAATGCAATGACACATTTGGCAGCTGACATTCGGTTCATGGCATTTGATTTCTTAGACCTTACTCTTGAATATTATCCTCCTTGCTTTTCTTCTTATGCAGAAAAGGATGATATTGGACAAAGAGTATTGCATGCTTTTGAAGCTGATAACTCTATGAGCTCTACTGGTTTTTCTCATATCATAATGAAACTGAAGGATCTAGTGCCAGTATTAGTAAATAGTTTTCAGGAATTTACTACATTGTTTAATGCCAGGGAGAATCTTGAAGGGAAGTCTTTTGGCTGTATGGCATCAATTCTTCATAGCATAGATCTTATAGTCAGGTCCTTCGTTTATGGGATTGATAAGAAGTCGGAATGCACAAGTTCTCAAGGTGGAGGCGATGTAGCTGTATGGGATGTATCTGTCTCTTCTGCATTCTTGAAGAAATTATTTCCTCTTTTCCCCCTTGATCCAGGGCATGGTCTTTCACAAAAGGTAGACACACATTTGTTTCTTTTACCTTCTGGAGGTGACTAG

Protein sequence

>MsG0780041183.01.T01

MTRPKAKSKKKSGVVDFKKRKVKIGRKLPPPKNATNTEVKSKAIILPEQSVAADKAGLAVNKKGLTLKELLSQTSHHNAKVRRDALMGIKDLFSKHPEELVLHKYRVVEKLRERIGDDDKVVRRSLYDLFKLVILPSCKEDNQELITSLLMAYIFNAMTHLAADIRFMAFDFLDLTLEYYPPCFSSYAEKDDIGQRVLHAFEADNSMSSTGFSHIIMKLKDLVPVLVNSFQEFTTLFNARENLEGKSFGCMASILHSIDLIVRSFVYGIDKKSECTSSQGGGDVAVWDVSVSSAFLKKLFPLFPLDPGHGLSQKVDTHLFLLPSGGD*