AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015607.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015607.01.T01 MTR_3g073240 97.764 313 7 0 1 313 1 313 0.0 637
MsG0380015607.01.T01 MTR_4g094420 54.545 253 101 5 1 245 1 247 5.85e-87 266
MsG0380015607.01.T01 MTR_7g059110 43.750 224 83 2 48 230 24 245 2.64e-58 191
MsG0380015607.01.T01 MTR_4g113730 38.696 230 100 2 43 232 43 271 6.19e-49 167
MsG0380015607.01.T01 MTR_1g009790 40.000 205 117 2 23 227 1 199 4.42e-48 163
MsG0380015607.01.T01 MTR_8g085870 39.394 231 122 3 1 219 1 225 7.34e-48 166
MsG0380015607.01.T01 MTR_1g009790 40.000 205 117 2 23 227 1 199 1.10e-47 163
MsG0380015607.01.T01 MTR_7g059110 57.522 113 48 0 118 230 170 282 5.22e-38 139
MsG0380015607.01.T01 MTR_7g059110 46.591 88 41 2 48 129 24 111 7.48e-16 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015607.01.T01 AT4G08460 62.051 195 52 2 34 228 33 205 3.00e-83 253
MsG0380015607.01.T01 AT4G08460 62.051 195 52 2 34 228 33 205 3.00e-83 253
MsG0380015607.01.T01 AT4G08460 62.051 195 52 2 34 228 33 205 3.00e-83 253
MsG0380015607.01.T01 AT4G08460 62.051 195 52 2 34 228 33 205 3.00e-83 253
MsG0380015607.01.T01 AT1G77770 52.609 230 69 4 4 233 1 190 7.04e-75 231
MsG0380015607.01.T01 AT1G77770 52.609 230 69 4 4 233 1 190 7.77e-75 231
MsG0380015607.01.T01 AT1G77770 52.609 230 69 4 4 233 1 190 7.77e-75 231
MsG0380015607.01.T01 AT1G68140 54.639 194 73 2 37 230 42 220 5.31e-72 225
MsG0380015607.01.T01 AT1G68140 42.561 289 127 6 37 301 42 315 2.79e-68 216
MsG0380015607.01.T01 AT1G68140 42.561 289 127 6 37 301 42 315 2.79e-68 216
MsG0380015607.01.T01 AT1G68140 42.561 289 127 6 37 301 42 315 2.79e-68 216
MsG0380015607.01.T01 AT3G24740 40.359 223 99 3 43 231 19 241 1.82e-53 179
MsG0380015607.01.T01 AT3G24740 40.359 223 99 3 43 231 19 241 1.82e-53 179
MsG0380015607.01.T01 AT3G24740 40.359 223 99 3 43 231 19 241 1.82e-53 179
MsG0380015607.01.T01 AT3G24740 40.359 223 99 3 43 231 19 241 1.82e-53 179
MsG0380015607.01.T01 AT3G24740 40.359 223 99 3 43 231 19 241 1.82e-53 179
MsG0380015607.01.T01 AT3G24740 40.359 223 99 3 43 231 19 241 1.82e-53 179
MsG0380015607.01.T01 AT4G31410 40.092 217 108 5 44 257 28 225 7.30e-47 160
MsG0380015607.01.T01 AT4G31410 40.092 217 108 5 44 257 28 225 7.30e-47 160
MsG0380015607.01.T01 AT4G31410 40.092 217 108 5 44 257 28 225 7.30e-47 160
MsG0380015607.01.T01 AT3G25910 36.325 234 96 2 43 223 36 269 2.61e-43 152
MsG0380015607.01.T01 AT1G80220 30.851 282 158 7 1 281 1 246 1.25e-35 129
MsG0380015607.01.T01 AT1G15430 34.762 210 107 4 5 210 6 189 4.53e-35 128
MsG0380015607.01.T01 AT1G15430 34.762 210 107 4 5 210 6 189 4.53e-35 128
MsG0380015607.01.T01 AT2G26050 32.624 141 70 2 70 209 38 154 3.18e-20 87.8

Find 79 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGGTTCTGCTGCTCTTTC+TGG 0.086227 3:-72463606 MsG0380015607.01.T01:CDS
ACTGATTCTGATGATGAATT+TGG 0.163731 3:-72463744 MsG0380015607.01.T01:CDS
CTATGCCTCCGTCGTCTTCT+AGG 0.214329 3:+72463552 None:intergenic
AACTCCAGGGGCTATGGTAC+TGG 0.215833 3:-72463814 MsG0380015607.01.T01:CDS
CGGCTAGTAGCACACATATA+AGG 0.248105 3:+72464236 None:intergenic
CTAGCACAAGATAAAAGATA+TGG 0.288835 3:+72464398 None:intergenic
TCTTGCCATTCAGAGACTTC+CGG 0.294090 3:+72464018 None:intergenic
TTCTTCGGCTCCATTGGTTT+GGG 0.298539 3:-72463705 MsG0380015607.01.T01:CDS
CTTGCCATTCAGAGACTTCC+GGG 0.300913 3:+72464019 None:intergenic
TTTCTTCGGCTCCATTGGTT+TGG 0.320053 3:-72463706 MsG0380015607.01.T01:CDS
CTGATTCTGATGATGAATTT+GGG 0.329708 3:-72463743 MsG0380015607.01.T01:CDS
TTTCCTTGTGACCTCGAGAT+TGG 0.332101 3:+72464423 None:intergenic
GTGGTACTGGCAGCTTTATC+AGG 0.366519 3:-72463683 MsG0380015607.01.T01:CDS
CTTTCACCTGTCGGCGGCAA+AGG 0.373229 3:+72464063 None:intergenic
TCCATTGGTTTGGGTGGTAC+TGG 0.373732 3:-72463696 MsG0380015607.01.T01:CDS
TTCCTTGTGACCTCGAGATT+GGG 0.384905 3:+72464424 None:intergenic
CTGTATAATCCACGGTCATT+TGG 0.390948 3:+72463774 None:intergenic
GTCTTCAACTCCAGGGGCTA+TGG 0.399273 3:-72463820 MsG0380015607.01.T01:CDS
GGTGATTTCTTCGGCTCCAT+TGG 0.401886 3:-72463711 MsG0380015607.01.T01:CDS
GGCTAGTAGCACACATATAA+GGG 0.411650 3:+72464237 None:intergenic
TTTCGGAGTGTTGCATCTAC+AGG 0.416952 3:-72463624 MsG0380015607.01.T01:CDS
TAGCACAAGATAAAAGATAT+GGG 0.419897 3:+72464399 None:intergenic
TTTCACCTGTCGGCGGCAAA+GGG 0.426605 3:+72464064 None:intergenic
AGTATTTAAATGGCTAAAGT+TGG 0.427830 3:-72464464 None:intergenic
GAGGATGATGGTGATTTCTT+CGG 0.432897 3:-72463720 MsG0380015607.01.T01:CDS
TTGTCCCCTTTGCCGCCGAC+AGG 0.433551 3:-72464069 MsG0380015607.01.T01:CDS
ACTCCAGGGGCTATGGTACT+GGG 0.435014 3:-72463813 MsG0380015607.01.T01:CDS
TGCTACCTGCTCAGTCTGTA+TGG 0.441789 3:-72464315 MsG0380015607.01.T01:CDS
CGGGGAGTTACAAGGAGCTT+AGG 0.444681 3:-72463962 MsG0380015607.01.T01:CDS
CCAAAGTCATCGACATCAAA+AGG 0.453118 3:+72463648 None:intergenic
ACTTCTCGTGGTCGCGAACA+TGG 0.461952 3:+72463918 None:intergenic
GAGGAGTAGGATAGCATTGT+GGG 0.468661 3:+72464286 None:intergenic
AAGCGGTAGAAAAGAAAGAT+TGG 0.472915 3:-72464343 MsG0380015607.01.T01:CDS
CAAAGGGGACAAAGAAGCTC+AGG 0.485626 3:+72464080 None:intergenic
TCTGCTGCTCTTTCTGGACG+TGG 0.489978 3:-72463600 MsG0380015607.01.T01:CDS
CTAGAAGACGACGGAGGCAT+AGG 0.517476 3:-72463551 MsG0380015607.01.T01:CDS
CTTTGCCGCCGACAGGTGAA+AGG 0.519049 3:-72464062 MsG0380015607.01.T01:CDS
ATGTTCGCGACCACGAGAAG+TGG 0.522683 3:-72463916 MsG0380015607.01.T01:CDS
TTCGGCTCCATTGGTTTGGG+TGG 0.524118 3:-72463702 MsG0380015607.01.T01:CDS
AGGCATAGGGTACTGAATGC+TGG 0.551130 3:-72463537 MsG0380015607.01.T01:CDS
CCTCTGTTCATCGTATAACA+AGG 0.553685 3:-72464267 MsG0380015607.01.T01:CDS
TTTCTGGACGTGGATTCCAC+AGG 0.555472 3:-72463590 MsG0380015607.01.T01:CDS
GTCCCAATCTCGAGGTCACA+AGG 0.563412 3:-72464426 MsG0380015607.01.T01:CDS
TAGAAGACGACGGAGGCATA+GGG 0.563527 3:-72463550 MsG0380015607.01.T01:CDS
GGACTGTGGTTGAAGCAGCC+CGG 0.563979 3:-72464037 MsG0380015607.01.T01:CDS
GATGAATTTGGGGAGGATGA+TGG 0.566776 3:-72463732 MsG0380015607.01.T01:CDS
AATTCGAGTGTGAAAGAGAA+CGG 0.568336 3:-72463866 MsG0380015607.01.T01:CDS
GCCGCCGACAGGTGAAAGGT+TGG 0.568951 3:-72464058 MsG0380015607.01.T01:CDS
GCCAGTACCACCCAAACCAA+TGG 0.572874 3:+72463695 None:intergenic
CTCCAGGGGCTATGGTACTG+GGG 0.573301 3:-72463812 MsG0380015607.01.T01:CDS
TGGATTCCACAGGATACTGT+TGG 0.574386 3:-72463580 MsG0380015607.01.T01:CDS
GTCTTTCCAACAGTATCCTG+TGG 0.591460 3:+72463574 None:intergenic
AGAGGAGTAGGATAGCATTG+TGG 0.593867 3:+72464285 None:intergenic
CAGTCCAACCTTTCACCTGT+CGG 0.596695 3:+72464054 None:intergenic
AACCTCCATACAGACTGAGC+AGG 0.601071 3:+72464310 None:intergenic
GCAGCCCGGAAGTCTCTGAA+TGG 0.601426 3:-72464023 MsG0380015607.01.T01:CDS
AAAAGAAGCTGTATGCAAGA+TGG 0.602513 3:-72463996 MsG0380015607.01.T01:CDS
TATACGATGAACAGAGGAGT+AGG 0.603641 3:+72464273 None:intergenic
TCCAGGGGCTATGGTACTGG+GGG 0.607557 3:-72463811 MsG0380015607.01.T01:CDS
ATAGGGTACTGAATGCTGGC+CGG 0.616066 3:-72463533 MsG0380015607.01.T01:CDS
AGCACAAGATAAAAGATATG+GGG 0.621741 3:+72464400 None:intergenic
TGGCTAAAGTTGGCAAGATG+CGG 0.627681 3:-72464454 MsG0380015607.01.T01:CDS
CAAAACAGTTAGAATAGCGA+CGG 0.627893 3:+72464216 None:intergenic
TCCAACCTTTCACCTGTCGG+CGG 0.644382 3:+72464057 None:intergenic
TGATTCTGATGATGAATTTG+GGG 0.645133 3:-72463742 MsG0380015607.01.T01:CDS
TACCTGCTCAGTCTGTATGG+AGG 0.645194 3:-72464312 MsG0380015607.01.T01:CDS
CTCTGTTCATCGTATAACAA+GGG 0.645683 3:-72464266 MsG0380015607.01.T01:CDS
CGTACAGGGTCCACTTCTCG+TGG 0.645791 3:+72463906 None:intergenic
TTCACCTGTCGGCGGCAAAG+GGG 0.648214 3:+72464065 None:intergenic
TTCTGATGATGAATTTGGGG+AGG 0.654732 3:-72463739 MsG0380015607.01.T01:CDS
TTTCGTCGCTGTATAATCCA+CGG 0.656197 3:+72463766 None:intergenic
CGGTGCAAGTCCCAATCTCG+AGG 0.662801 3:-72464434 MsG0380015607.01.T01:CDS
GTAGAAAAGAAAGATTGGAA+AGG 0.684023 3:-72464338 MsG0380015607.01.T01:CDS
GTGCTCGAGCCAAATGACCG+TGG 0.685398 3:-72463783 MsG0380015607.01.T01:CDS
CCTTGTTATACGATGAACAG+AGG 0.702851 3:+72464267 None:intergenic
TGGAAAGACCTAGAAGACGA+CGG 0.711922 3:-72463560 MsG0380015607.01.T01:CDS
AGGAGTAGGATAGCATTGTG+GGG 0.724984 3:+72464287 None:intergenic
ACAGGTGAAAGGTTGGACTG+TGG 0.742392 3:-72464051 MsG0380015607.01.T01:CDS
AAAGACCTAGAAGACGACGG+AGG 0.779006 3:-72463557 MsG0380015607.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATGAAAAATGTCAAG+AGG - Chr3:72463612-72463631 MsG0380015607.01.T01:CDS 20.0%
! TAGCACAAGATAAAAGATAT+GGG + Chr3:72463589-72463608 None:intergenic 25.0%
!!! CTGTTTTGAACAGTATAAAA+AGG - Chr3:72463784-72463803 MsG0380015607.01.T01:CDS 25.0%
!!! TCGAATTTTGATTCTAATTC+TGG - Chr3:72463857-72463876 MsG0380015607.01.T01:CDS 25.0%
AGCACAAGATAAAAGATATG+GGG + Chr3:72463588-72463607 None:intergenic 30.0%
CTAGCACAAGATAAAAGATA+TGG + Chr3:72463590-72463609 None:intergenic 30.0%
GTAGAAAAGAAAGATTGGAA+AGG - Chr3:72463647-72463666 MsG0380015607.01.T01:CDS 30.0%
! ACTGATTCTGATGATGAATT+TGG - Chr3:72464241-72464260 MsG0380015607.01.T01:CDS 30.0%
! CTGATTCTGATGATGAATTT+GGG - Chr3:72464242-72464261 MsG0380015607.01.T01:CDS 30.0%
! TGATTCTGATGATGAATTTG+GGG - Chr3:72464243-72464262 MsG0380015607.01.T01:CDS 30.0%
AAAAGAAGCTGTATGCAAGA+TGG - Chr3:72463989-72464008 MsG0380015607.01.T01:CDS 35.0%
AAGCGGTAGAAAAGAAAGAT+TGG - Chr3:72463642-72463661 MsG0380015607.01.T01:CDS 35.0%
AATTCGAGTGTGAAAGAGAA+CGG - Chr3:72464119-72464138 MsG0380015607.01.T01:CDS 35.0%
CAAAACAGTTAGAATAGCGA+CGG + Chr3:72463772-72463791 None:intergenic 35.0%
CTCTGTTCATCGTATAACAA+GGG - Chr3:72463719-72463738 MsG0380015607.01.T01:CDS 35.0%
! AATTTTGTCTTCAACTCCAG+GGG - Chr3:72464159-72464178 MsG0380015607.01.T01:CDS 35.0%
! ACAATTTTGTCTTCAACTCC+AGG - Chr3:72464157-72464176 MsG0380015607.01.T01:CDS 35.0%
! CAATTTTGTCTTCAACTCCA+GGG - Chr3:72464158-72464177 MsG0380015607.01.T01:CDS 35.0%
!! TCCATTTTTCTTCTCGTACA+GGG + Chr3:72464096-72464115 None:intergenic 35.0%
!! TGTCAAGAGGTTTTCTAAAG+CGG - Chr3:72463625-72463644 MsG0380015607.01.T01:CDS 35.0%
!! TTCCATTTTTCTTCTCGTAC+AGG + Chr3:72464097-72464116 None:intergenic 35.0%
!!! ATGTCGATGACTTTGGTTTT+CGG - Chr3:72464344-72464363 MsG0380015607.01.T01:CDS 35.0%
ACCCTGTACGAGAAGAAAAA+TGG - Chr3:72464092-72464111 MsG0380015607.01.T01:CDS 40.0%
CCAAAGTCATCGACATCAAA+AGG + Chr3:72464340-72464359 None:intergenic 40.0%
CCTCTGTTCATCGTATAACA+AGG - Chr3:72463718-72463737 MsG0380015607.01.T01:CDS 40.0%
CTGTATAATCCACGGTCATT+TGG + Chr3:72464214-72464233 None:intergenic 40.0%
GGCTAGTAGCACACATATAA+GGG + Chr3:72463751-72463770 None:intergenic 40.0%
TATACGATGAACAGAGGAGT+AGG + Chr3:72463715-72463734 None:intergenic 40.0%
TTTCGTCGCTGTATAATCCA+CGG + Chr3:72464222-72464241 None:intergenic 40.0%
! CCTTGTTATACGATGAACAG+AGG + Chr3:72463721-72463740 None:intergenic 40.0%
! CCTTTTGATGTCGATGACTT+TGG - Chr3:72464337-72464356 MsG0380015607.01.T01:CDS 40.0%
! GAACTTTTGCATCGTCACTA+CGG + Chr3:72463886-72463905 None:intergenic 40.0%
! GAGGATGATGGTGATTTCTT+CGG - Chr3:72464265-72464284 MsG0380015607.01.T01:CDS 40.0%
! TTCTGATGATGAATTTGGGG+AGG - Chr3:72464246-72464265 MsG0380015607.01.T01:CDS 40.0%
AGAGGAGTAGGATAGCATTG+TGG + Chr3:72463703-72463722 None:intergenic 45.0%
AGGAGTAGGATAGCATTGTG+GGG + Chr3:72463701-72463720 None:intergenic 45.0%
CGGCTAGTAGCACACATATA+AGG + Chr3:72463752-72463771 None:intergenic 45.0%
GAGGAGTAGGATAGCATTGT+GGG + Chr3:72463702-72463721 None:intergenic 45.0%
GATGAATTTGGGGAGGATGA+TGG - Chr3:72464253-72464272 MsG0380015607.01.T01:CDS 45.0%
GTCTTTCCAACAGTATCCTG+TGG + Chr3:72464414-72464433 None:intergenic 45.0%
TCTTGCCATTCAGAGACTTC+CGG + Chr3:72463970-72463989 None:intergenic 45.0%
TGGAAAGACCTAGAAGACGA+CGG - Chr3:72464425-72464444 MsG0380015607.01.T01:CDS 45.0%
TGGATTCCACAGGATACTGT+TGG - Chr3:72464405-72464424 MsG0380015607.01.T01:CDS 45.0%
TGGCTAAAGTTGGCAAGATG+CGG - Chr3:72463531-72463550 MsG0380015607.01.T01:CDS 45.0%
TTCCTTGTGACCTCGAGATT+GGG + Chr3:72463564-72463583 None:intergenic 45.0%
TTTCCTTGTGACCTCGAGAT+TGG + Chr3:72463565-72463584 None:intergenic 45.0%
! AAGATGGCTGTTCTTTTGCG+GGG - Chr3:72464005-72464024 MsG0380015607.01.T01:CDS 45.0%
! CAAGATGGCTGTTCTTTTGC+GGG - Chr3:72464004-72464023 MsG0380015607.01.T01:CDS 45.0%
! GCAAGATGGCTGTTCTTTTG+CGG - Chr3:72464003-72464022 MsG0380015607.01.T01:CDS 45.0%
! TTCTTTTGCGGGGAGTTACA+AGG - Chr3:72464015-72464034 MsG0380015607.01.T01:CDS 45.0%
! TTTCTTCGGCTCCATTGGTT+TGG - Chr3:72464279-72464298 MsG0380015607.01.T01:CDS 45.0%
!! TTCTTCGGCTCCATTGGTTT+GGG - Chr3:72464280-72464299 MsG0380015607.01.T01:CDS 45.0%
!! TTTCGGAGTGTTGCATCTAC+AGG - Chr3:72464361-72464380 MsG0380015607.01.T01:CDS 45.0%
AAAGACCTAGAAGACGACGG+AGG - Chr3:72464428-72464447 MsG0380015607.01.T01:CDS 50.0%
AACCTCCATACAGACTGAGC+AGG + Chr3:72463678-72463697 None:intergenic 50.0%
ACAGGTGAAAGGTTGGACTG+TGG - Chr3:72463934-72463953 MsG0380015607.01.T01:CDS 50.0%
ACAGGTTCTGCTGCTCTTTC+TGG - Chr3:72464379-72464398 MsG0380015607.01.T01:CDS 50.0%
CAAAGGGGACAAAGAAGCTC+AGG + Chr3:72463908-72463927 None:intergenic 50.0%
CAGTCCAACCTTTCACCTGT+CGG + Chr3:72463934-72463953 None:intergenic 50.0%
CTTGCCATTCAGAGACTTCC+GGG + Chr3:72463969-72463988 None:intergenic 50.0%
GGTGATTTCTTCGGCTCCAT+TGG - Chr3:72464274-72464293 MsG0380015607.01.T01:CDS 50.0%
TACCTGCTCAGTCTGTATGG+AGG - Chr3:72463673-72463692 MsG0380015607.01.T01:CDS 50.0%
TGCTACCTGCTCAGTCTGTA+TGG - Chr3:72463670-72463689 MsG0380015607.01.T01:CDS 50.0%
TTTCTGGACGTGGATTCCAC+AGG - Chr3:72464395-72464414 MsG0380015607.01.T01:CDS 50.0%
! TAGAAGACGACGGAGGCATA+GGG - Chr3:72464435-72464454 MsG0380015607.01.T01:CDS 50.0%
!! AGGCATAGGGTACTGAATGC+TGG - Chr3:72464448-72464467 MsG0380015607.01.T01:CDS 50.0%
!! ATAGGGTACTGAATGCTGGC+CGG - Chr3:72464452-72464471 MsG0380015607.01.T01:CDS 50.0%
!! GTGGTACTGGCAGCTTTATC+AGG - Chr3:72464302-72464321 MsG0380015607.01.T01:CDS 50.0%
!! TCCATTGGTTTGGGTGGTAC+TGG - Chr3:72464289-72464308 MsG0380015607.01.T01:CDS 50.0%
AACTCCAGGGGCTATGGTAC+TGG - Chr3:72464171-72464190 MsG0380015607.01.T01:CDS 55.0%
ACTCCAGGGGCTATGGTACT+GGG - Chr3:72464172-72464191 MsG0380015607.01.T01:CDS 55.0%
ACTTCTCGTGGTCGCGAACA+TGG + Chr3:72464070-72464089 None:intergenic 55.0%
ATGTTCGCGACCACGAGAAG+TGG - Chr3:72464069-72464088 MsG0380015607.01.T01:CDS 55.0%
CGGGGAGTTACAAGGAGCTT+AGG - Chr3:72464023-72464042 MsG0380015607.01.T01:CDS 55.0%
CTATGCCTCCGTCGTCTTCT+AGG + Chr3:72464436-72464455 None:intergenic 55.0%
GCCAGTACCACCCAAACCAA+TGG + Chr3:72464293-72464312 None:intergenic 55.0%
GTCCCAATCTCGAGGTCACA+AGG - Chr3:72463559-72463578 MsG0380015607.01.T01:CDS 55.0%
GTCTTCAACTCCAGGGGCTA+TGG - Chr3:72464165-72464184 MsG0380015607.01.T01:CDS 55.0%
TCCAACCTTTCACCTGTCGG+CGG + Chr3:72463931-72463950 None:intergenic 55.0%
TCTGCTGCTCTTTCTGGACG+TGG - Chr3:72464385-72464404 MsG0380015607.01.T01:CDS 55.0%
TTTCACCTGTCGGCGGCAAA+GGG + Chr3:72463924-72463943 None:intergenic 55.0%
! CTAGAAGACGACGGAGGCAT+AGG - Chr3:72464434-72464453 MsG0380015607.01.T01:CDS 55.0%
!! TTCGGCTCCATTGGTTTGGG+TGG - Chr3:72464283-72464302 MsG0380015607.01.T01:CDS 55.0%
CGGTGCAAGTCCCAATCTCG+AGG - Chr3:72463551-72463570 MsG0380015607.01.T01:CDS 60.0%
CGTACAGGGTCCACTTCTCG+TGG + Chr3:72464082-72464101 None:intergenic 60.0%
CTCCAGGGGCTATGGTACTG+GGG - Chr3:72464173-72464192 MsG0380015607.01.T01:CDS 60.0%
CTTTCACCTGTCGGCGGCAA+AGG + Chr3:72463925-72463944 None:intergenic 60.0%
CTTTGCCGCCGACAGGTGAA+AGG - Chr3:72463923-72463942 MsG0380015607.01.T01:CDS 60.0%
GCAGCCCGGAAGTCTCTGAA+TGG - Chr3:72463962-72463981 MsG0380015607.01.T01:CDS 60.0%
GGACTGTGGTTGAAGCAGCC+CGG - Chr3:72463948-72463967 MsG0380015607.01.T01:CDS 60.0%
GTGCTCGAGCCAAATGACCG+TGG - Chr3:72464202-72464221 MsG0380015607.01.T01:CDS 60.0%
TTCACCTGTCGGCGGCAAAG+GGG + Chr3:72463923-72463942 None:intergenic 60.0%
! TCCAGGGGCTATGGTACTGG+GGG - Chr3:72464174-72464193 MsG0380015607.01.T01:CDS 60.0%
GCCGCCGACAGGTGAAAGGT+TGG - Chr3:72463927-72463946 MsG0380015607.01.T01:CDS 65.0%
TCCCCCAGTACCATAGCCCC+TGG + Chr3:72464178-72464197 None:intergenic 65.0%
TTGTCCCCTTTGCCGCCGAC+AGG - Chr3:72463916-72463935 MsG0380015607.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 72463530 72464477 72463530 ID=MsG0380015607.01;Name=MsG0380015607.01
Chr3 mRNA 72463530 72464477 72463530 ID=MsG0380015607.01.T01;Parent=MsG0380015607.01;Name=MsG0380015607.01.T01;_AED=0.40;_eAED=0.40;_QI=0|-1|0|1|-1|1|1|0|315
Chr3 exon 72463530 72464477 72463530 ID=MsG0380015607.01.T01:exon:24088;Parent=MsG0380015607.01.T01
Chr3 CDS 72463530 72464477 72463530 ID=MsG0380015607.01.T01:cds;Parent=MsG0380015607.01.T01
Gene Sequence

>MsG0380015607.01.T01

ATGGCTAAAGTTGGCAAGATGCGGTGCAAGTCCCAATCTCGAGGTCACAAGGAAACCCCATATCTTTTATCTTGTGCTAGAAAAAATATGAAAAATGTCAAGAGGTTTTCTAAAGCGGTAGAAAAGAAAGATTGGAAAGGTGCTACCTGCTCAGTCTGTATGGAGGTTCCCCACAATGCTATCCTACTCCTCTGTTCATCGTATAACAAGGGCTGTCGCCCTTATATGTGTGCTACTAGCCGTCGCTATTCTAACTGTTTTGAACAGTATAAAAAGGCGTATACAAAAGCAACTTCTGTTCAAAGTTCGCAGCAAGAAACAGACTATTCGAATTTTGATTCTAATTCTGGCGACCGTAGTGACGATGCAAAAGTTCCTGAGCTTCTTTGTCCCCTTTGCCGCCGACAGGTGAAAGGTTGGACTGTGGTTGAAGCAGCCCGGAAGTCTCTGAATGGCAAGAAAAGAAGCTGTATGCAAGATGGCTGTTCTTTTGCGGGGAGTTACAAGGAGCTTAGGAAGCATGTTAGATCTAAGCATCCATGTTCGCGACCACGAGAAGTGGACCCTGTACGAGAAGAAAAATGGAAAAAATTCGAGTGTGAAAGAGAACGGAGTGATGTGATCAGCACAATTTTGTCTTCAACTCCAGGGGCTATGGTACTGGGGGATTATGTGCTCGAGCCAAATGACCGTGGATTATACAGCGACGAAACTGATTCTGATGATGAATTTGGGGAGGATGATGGTGATTTCTTCGGCTCCATTGGTTTGGGTGGTACTGGCAGCTTTATCAGGTATAATCAGAATCCTTTTGATGTCGATGACTTTGGTTTTCGGAGTGTTGCATCTACAGGTTCTGCTGCTCTTTCTGGACGTGGATTCCACAGGATACTGTTGGAAAGACCTAGAAGACGACGGAGGCATAGGGTACTGAATGCTGGCCGGTAA

Protein sequence

>MsG0380015607.01.T01

MAKVGKMRCKSQSRGHKETPYLLSCARKNMKNVKRFSKAVEKKDWKGATCSVCMEVPHNAILLLCSSYNKGCRPYMCATSRRYSNCFEQYKKAYTKATSVQSSQQETDYSNFDSNSGDRSDDAKVPELLCPLCRRQVKGWTVVEAARKSLNGKKRSCMQDGCSFAGSYKELRKHVRSKHPCSRPREVDPVREEKWKKFECERERSDVISTILSSTPGAMVLGDYVLEPNDRGLYSDETDSDDEFGEDDGDFFGSIGLGGTGSFIRYNQNPFDVDDFGFRSVASTGSAALSGRGFHRILLERPRRRRRHRVLNAGR*