AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040312.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040312.01.T01 MTR_7g088140 97.755 490 11 0 1 490 1 490 0.0 970
MsG0780040312.01.T01 MTR_7g088140 97.973 444 9 0 1 444 1 444 0.0 881
MsG0780040312.01.T01 MTR_5g088220 53.140 414 143 11 85 489 123 494 1.76e-108 331
MsG0780040312.01.T01 MTR_4g088010 40.476 252 132 2 79 330 30 263 1.38e-62 208
MsG0780040312.01.T01 MTR_8g463890 46.988 249 118 4 87 334 33 268 3.20e-62 209
MsG0780040312.01.T01 MTR_3g116130 40.816 98 58 0 122 219 24 121 3.43e-18 85.1
MsG0780040312.01.T01 MTR_3g116130 40.816 98 58 0 122 219 24 121 1.86e-17 84.3
MsG0780040312.01.T01 MTR_7g117495 44.048 84 47 0 122 205 13 96 2.65e-17 82.0
MsG0780040312.01.T01 MTR_7g117495 44.048 84 47 0 122 205 13 96 2.71e-17 82.0
MsG0780040312.01.T01 MTR_3g092490 43.529 85 48 0 122 206 21 105 1.43e-16 78.2
MsG0780040312.01.T01 MTR_3g092490 44.444 81 45 0 122 202 21 101 2.47e-16 79.0
MsG0780040312.01.T01 MTR_3g092490 44.444 81 45 0 122 202 21 101 2.48e-16 79.0
MsG0780040312.01.T01 MTR_5g064120 40.964 83 49 0 122 204 11 93 4.46e-16 79.0
MsG0780040312.01.T01 MTR_4g035310 41.667 84 49 0 122 205 11 94 7.60e-16 78.2
MsG0780040312.01.T01 MTR_4g035310 41.667 84 49 0 122 205 11 94 7.65e-16 78.2
MsG0780040312.01.T01 MTR_5g097580 25.362 276 182 11 128 397 7 264 1.59e-15 79.3
MsG0780040312.01.T01 MTR_5g097580 25.725 276 181 11 128 397 7 264 1.77e-15 79.0
MsG0780040312.01.T01 MTR_8g024520 42.169 83 48 0 123 205 21 103 1.83e-15 77.0
MsG0780040312.01.T01 MTR_8g024520 42.169 83 48 0 123 205 21 103 1.88e-15 77.0
MsG0780040312.01.T01 MTR_2g026180 21.992 241 153 4 128 354 5 224 3.30e-14 75.1
MsG0780040312.01.T01 MTR_1g073690 23.936 188 138 2 123 306 2 188 1.00e-13 73.6
MsG0780040312.01.T01 MTR_3g103420 23.404 188 140 2 123 306 6 193 4.87e-13 70.9
MsG0780040312.01.T01 MTR_3g055990 24.339 189 137 2 128 313 7 192 5.45e-13 71.2
MsG0780040312.01.T01 MTR_3g055990 25.121 207 113 7 128 313 7 192 5.96e-13 71.2
MsG0780040312.01.T01 MTR_6g004810 24.757 206 133 4 124 327 42 227 1.04e-12 70.1
MsG0780040312.01.T01 MTR_5g017280 24.339 189 124 5 127 312 4 176 2.05e-12 69.3
MsG0780040312.01.T01 MTR_5g017280 24.339 189 124 5 127 312 4 176 2.54e-12 68.6
MsG0780040312.01.T01 MTR_7g105260 46.269 67 36 0 128 194 33 99 2.91e-12 64.7
MsG0780040312.01.T01 MTR_4g070190 44.118 68 37 1 119 186 1 67 1.99e-11 62.8
MsG0780040312.01.T01 MTR_4g070140 43.333 60 34 0 128 187 9 68 6.24e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040312.01.T01 AT2G41060 53.187 502 168 13 1 489 1 448 2.22e-150 437
MsG0780040312.01.T01 AT2G41060 53.187 502 168 13 1 489 1 448 2.22e-150 437
MsG0780040312.01.T01 AT2G41060 53.187 502 168 13 1 489 1 448 2.22e-150 437
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G56860 60.143 419 122 12 78 489 91 471 1.00e-145 426
MsG0780040312.01.T01 AT3G15010 46.256 227 111 1 87 313 35 250 8.28e-61 205
MsG0780040312.01.T01 AT3G15010 46.256 227 111 1 87 313 35 250 8.28e-61 205
MsG0780040312.01.T01 AT2G22090 50.394 127 63 0 80 206 57 183 1.31e-39 146
MsG0780040312.01.T01 AT2G22090 33.613 119 72 1 199 317 80 191 6.09e-12 67.4
MsG0780040312.01.T01 AT2G22090 50.394 127 63 0 80 206 57 183 1.63e-39 146
MsG0780040312.01.T01 AT2G22090 33.613 119 72 1 199 317 80 191 6.31e-12 67.4
MsG0780040312.01.T01 AT2G19380 47.656 128 67 0 79 206 360 487 2.88e-32 130
MsG0780040312.01.T01 AT2G22100 46.825 126 67 0 74 199 110 235 4.88e-32 127
MsG0780040312.01.T01 AT1G20880 43.878 98 53 1 122 219 19 114 9.01e-19 86.7
MsG0780040312.01.T01 AT1G20880 43.878 98 53 1 122 219 19 114 9.01e-19 86.7
MsG0780040312.01.T01 AT1G20880 43.878 98 53 1 122 219 19 114 9.01e-19 86.7
MsG0780040312.01.T01 AT1G76460 43.878 98 53 1 122 219 19 114 1.89e-18 85.9
MsG0780040312.01.T01 AT1G22330 42.857 91 51 1 122 211 12 102 4.21e-18 85.1
MsG0780040312.01.T01 AT1G22910 41.935 93 54 0 119 211 5 97 2.30e-17 82.0
MsG0780040312.01.T01 AT1G22910 43.678 87 49 0 119 205 5 91 2.46e-17 82.0
MsG0780040312.01.T01 AT1G22910 41.935 93 54 0 119 211 5 97 1.74e-16 81.3
MsG0780040312.01.T01 AT1G78260 40.964 83 49 0 122 204 12 94 2.47e-16 79.7
MsG0780040312.01.T01 AT4G36960 25.907 193 123 5 127 319 3 175 6.49e-16 79.7
MsG0780040312.01.T01 AT4G36960 25.907 193 123 5 127 319 3 175 6.49e-16 79.7
MsG0780040312.01.T01 AT1G33470 42.169 83 48 0 123 205 3 85 8.38e-16 77.4
MsG0780040312.01.T01 AT1G78260 40.964 83 49 0 122 204 12 94 8.60e-16 77.8
MsG0780040312.01.T01 AT1G33470 42.169 83 48 0 123 205 3 85 9.66e-16 77.4
MsG0780040312.01.T01 AT1G33470 42.045 88 50 1 123 210 3 89 1.03e-15 77.4
MsG0780040312.01.T01 AT5G53680 42.169 83 48 0 123 205 9 91 1.92e-15 74.7
MsG0780040312.01.T01 AT5G55550 24.309 181 134 2 128 306 7 186 5.78e-15 77.4
MsG0780040312.01.T01 AT5G55550 24.309 181 134 2 128 306 7 186 5.78e-15 77.4
MsG0780040312.01.T01 AT5G55550 24.309 181 134 2 128 306 7 186 5.78e-15 77.4
MsG0780040312.01.T01 AT5G55550 24.309 181 134 2 128 306 7 186 5.78e-15 77.4
MsG0780040312.01.T01 AT5G55550 24.309 181 134 2 128 306 7 186 5.78e-15 77.4
MsG0780040312.01.T01 AT5G40490 25.698 179 117 2 128 305 43 206 6.03e-15 77.4
MsG0780040312.01.T01 AT3G07810 24.107 224 153 6 124 339 3 217 6.26e-15 77.4
MsG0780040312.01.T01 AT1G17640 27.607 163 106 3 128 290 67 217 6.67e-15 76.6
MsG0780040312.01.T01 AT1G17640 27.607 163 106 3 128 290 67 217 6.67e-15 76.6
MsG0780040312.01.T01 AT1G17640 27.607 163 106 3 128 290 67 217 6.67e-15 76.6
MsG0780040312.01.T01 AT5G55550 24.309 181 134 2 128 306 7 186 7.57e-15 77.0
MsG0780040312.01.T01 AT5G55550 24.309 181 134 2 128 306 7 186 7.57e-15 77.0
MsG0780040312.01.T01 AT5G55550 24.309 181 134 2 128 306 7 186 7.57e-15 77.0
MsG0780040312.01.T01 AT5G55550 24.309 181 134 2 128 306 7 186 7.57e-15 77.0
MsG0780040312.01.T01 AT3G07810 24.107 224 153 6 124 339 3 217 7.72e-15 77.4
MsG0780040312.01.T01 AT4G26650 25.000 184 132 2 128 306 16 198 1.70e-14 75.9
MsG0780040312.01.T01 AT4G26650 25.000 184 132 2 128 306 13 195 2.22e-14 75.5
MsG0780040312.01.T01 AT2G46780 42.169 83 48 0 123 205 18 100 6.50e-14 73.2
MsG0780040312.01.T01 AT2G46780 42.169 83 48 0 123 205 18 100 6.50e-14 73.2
MsG0780040312.01.T01 AT3G54770 39.286 84 51 0 122 205 12 95 7.75e-14 72.0
MsG0780040312.01.T01 AT3G54770 39.286 84 51 0 122 205 12 95 9.04e-14 71.6
MsG0780040312.01.T01 AT5G47620 21.860 215 161 2 128 342 7 214 9.78e-14 73.6
MsG0780040312.01.T01 AT5G47620 21.860 215 161 2 128 342 7 214 9.78e-14 73.6
MsG0780040312.01.T01 AT5G47620 21.860 215 161 2 128 342 7 214 9.78e-14 73.6
MsG0780040312.01.T01 AT4G14300 23.810 189 135 4 123 306 2 186 4.74e-13 71.2
MsG0780040312.01.T01 AT4G14300 23.810 189 135 4 123 306 2 186 4.74e-13 71.2
MsG0780040312.01.T01 AT2G33410 21.978 182 137 3 128 306 7 186 6.23e-13 70.9
MsG0780040312.01.T01 AT3G06970 36.697 109 66 2 123 229 8 115 1.53e-12 68.9
MsG0780040312.01.T01 AT1G58470 22.051 195 141 1 123 306 2 196 1.72e-12 69.3
MsG0780040312.01.T01 AT1G58470 22.051 195 141 1 123 306 2 196 1.72e-12 69.3
MsG0780040312.01.T01 AT5G11412 37.500 96 59 1 110 205 36 130 2.48e-12 65.9
MsG0780040312.01.T01 AT5G53720 39.744 78 47 0 128 205 10 87 2.83e-12 63.5
MsG0780040312.01.T01 AT4G39260 41.667 60 35 0 128 187 7 66 1.59e-11 61.6
MsG0780040312.01.T01 AT2G21660 39.706 68 40 1 119 186 1 67 1.84e-11 62.8
MsG0780040312.01.T01 AT4G39260 40.625 64 38 0 128 191 7 70 2.24e-11 61.6
MsG0780040312.01.T01 AT4G39260 40.625 64 38 0 128 191 7 70 2.84e-11 60.5
MsG0780040312.01.T01 AT5G59865 53.846 52 24 0 124 175 23 74 4.48e-11 60.5
MsG0780040312.01.T01 AT1G60650 36.842 76 47 1 128 202 13 88 4.82e-11 64.3
MsG0780040312.01.T01 AT1G60650 36.842 76 47 1 128 202 13 88 4.82e-11 64.3
MsG0780040312.01.T01 AT3G23830 36.364 77 48 1 128 203 36 112 5.30e-11 60.8
MsG0780040312.01.T01 AT3G23830 36.364 77 48 1 128 203 36 112 5.30e-11 60.8
MsG0780040312.01.T01 AT4G39260 40.625 64 38 0 128 191 7 70 5.55e-11 61.6

Find 173 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGATAATGTTGGATTTAT+TGG 0.118007 7:-75806163 MsG0780040312.01.T01:CDS
GCTGTTACGGATAAGGTTTC+AGG 0.206721 7:-75806727 MsG0780040312.01.T01:CDS
TGCTAGTGCTTCTGCTGCAC+AGG 0.250683 7:-75806062 MsG0780040312.01.T01:CDS
CAGCTTGGACAGGGTGGTTC+TGG 0.259906 7:-75805785 MsG0780040312.01.T01:CDS
TATGGTTCCGGTTCGGGTTC+GGG 0.266714 7:+75807108 None:intergenic
TCCCATTACGGTTGGACTTA+TGG 0.269143 7:+75805862 None:intergenic
TCAGGGTGCTACGTTGGGGC+TGG 0.270572 7:-75805981 MsG0780040312.01.T01:CDS
GACGGCGTTGCTTGCTTCTC+AGG 0.271562 7:-75805999 MsG0780040312.01.T01:CDS
AAAATCTTTGTTCATGGTTT+GGG 0.280136 7:-75806817 MsG0780040312.01.T01:CDS
GCTTCTCAGGGTGCTACGTT+GGG 0.281924 7:-75805986 MsG0780040312.01.T01:CDS
TGAAAGGTTCTAGAAGCTTC+TGG 0.286546 7:+75806941 None:intergenic
GTATGGTTCCGGTTCGGGTT+CGG 0.291038 7:+75807107 None:intergenic
GGGATGTATGGTTCCGGTTC+GGG 0.295347 7:+75807102 None:intergenic
TCCGGTTCGGGTTCGGGTAC+TGG 0.311805 7:+75807114 None:intergenic
TCGGGTTCGGGTACTGGTTC+CGG 0.318291 7:+75807120 None:intergenic
GCGTGTCAGCTGGCGTCTAT+TGG 0.324761 7:-75806607 MsG0780040312.01.T01:CDS
TAAGGTTTCAGGGAAATCTA+AGG 0.326026 7:-75806716 MsG0780040312.01.T01:CDS
TTGGGGCTGGGTAATTTATT+GGG 0.330550 7:-75805968 MsG0780040312.01.T01:CDS
TCAGGGAAATCTAAGGGTTA+TGG 0.338138 7:-75806709 MsG0780040312.01.T01:CDS
TAGCCAACCAGGGCACTTAA+TGG 0.339964 7:-75806122 MsG0780040312.01.T01:CDS
TATTCTTCGCCGGGGATGTA+TGG 0.343235 7:+75807090 None:intergenic
TCGGGTACTGGTTCCGGTTT+AGG 0.345572 7:+75807126 None:intergenic
GTTGGGGCTGGGTAATTTAT+TGG 0.351668 7:-75805969 MsG0780040312.01.T01:CDS
TAGTAATGTTGGAGCTGATT+TGG 0.360095 7:-75806497 MsG0780040312.01.T01:CDS
CCCTGTCCAAGCTGCTGGTT+CGG 0.367353 7:+75805794 None:intergenic
AAGATTTATATTAGTAATGT+TGG 0.368173 7:-75806508 MsG0780040312.01.T01:CDS
GGTGGCGCCGTTGGTGGTGC+CGG 0.370594 7:-75806551 MsG0780040312.01.T01:CDS
ACCAGTACCCGAACCCGAAC+CGG 0.374395 7:-75807115 MsG0780040312.01.T01:CDS
GCTAGTGCTTCTGCTGCACA+GGG 0.374971 7:-75806061 MsG0780040312.01.T01:CDS
TTGTAAAGCTGTTACGGATA+AGG 0.376036 7:-75806734 MsG0780040312.01.T01:CDS
GCCGTTGGTGGTGCCGGGTT+CGG 0.376950 7:-75806545 MsG0780040312.01.T01:CDS
GGAAGTAGAGGAGGAGGAAG+AGG 0.377567 7:-75807025 MsG0780040312.01.T01:CDS
GGTGTTCCTGCTGCTGGTCA+TGG 0.378632 7:-75805914 MsG0780040312.01.T01:CDS
TCCGGTGGTTGCAGCGGCGG+TGG 0.380898 7:-75806569 MsG0780040312.01.T01:CDS
GGGGATGTATGGTTCCGGTT+CGG 0.387478 7:+75807101 None:intergenic
GTGATGTTGCGGATCGGATT+CGG 0.390034 7:-75806870 MsG0780040312.01.T01:CDS
CCAACCGTAATGGGAGCATA+TGG 0.394272 7:-75805854 MsG0780040312.01.T01:CDS
ACCTCTTCGTATTCTTCGCC+GGG 0.396618 7:+75807081 None:intergenic
GGTAATTTATTGGGGAGTCT+TGG 0.397143 7:-75805959 MsG0780040312.01.T01:CDS
TGTACCACAGGCTGGATTGC+AGG 0.397446 7:-75805825 MsG0780040312.01.T01:CDS
ACCATAAGTCCAACCGTAAT+GGG 0.401409 7:-75805863 MsG0780040312.01.T01:CDS
AAGGAGCCGCAGAAGAAGAT+TGG 0.406787 7:-75806643 MsG0780040312.01.T01:CDS
GGTTCTGGAAGAGGGCAATA+TGG 0.407146 7:-75805770 MsG0780040312.01.T01:CDS
ACTCCTGGTGTTCCTGCTGC+TGG 0.407521 7:-75805920 MsG0780040312.01.T01:CDS
GGAGGAAGAGGAGGAAGAAG+AGG 0.415155 7:-75807013 MsG0780040312.01.T01:CDS
GCCTGATTGTACCCGGCTAC+TGG 0.419681 7:+75806088 None:intergenic
TGCTTCTCAGGGTGCTACGT+TGG 0.424012 7:-75805987 MsG0780040312.01.T01:CDS
CCTGCGCTGACTCCTGCACT+TGG 0.433465 7:-75806031 MsG0780040312.01.T01:CDS
ATTCCCATATGCTCCCATTA+CGG 0.434145 7:+75805850 None:intergenic
TCTGACTCAATGGATTCAAT+TGG 0.434757 7:+75806203 None:intergenic
TGAAGAGGAAGTAGAGGAGG+AGG 0.435088 7:-75807031 MsG0780040312.01.T01:CDS
GAGATTGAGGAAGGGCCGTT+AGG 0.435741 7:-75806436 MsG0780040312.01.T01:CDS
TCGCCGGGGATGTATGGTTC+CGG 0.435872 7:+75807096 None:intergenic
TGAGGATTGTAAAGCTGTTA+CGG 0.437274 7:-75806740 MsG0780040312.01.T01:CDS
TTCGAGATTTGGAGAGATTG+AGG 0.437702 7:-75806449 MsG0780040312.01.T01:CDS
ACCGCTCAAACAACATCAAC+CGG 0.438224 7:-75807151 MsG0780040312.01.T01:CDS
CAGGGTGCTACGTTGGGGCT+GGG 0.438849 7:-75805980 MsG0780040312.01.T01:CDS
GAGTGCGAGAAGGGCGTTGG+AGG 0.443617 7:-75806353 MsG0780040312.01.T01:CDS
GTGGCGCCGTTGGTGGTGCC+GGG 0.444273 7:-75806550 MsG0780040312.01.T01:CDS
ACAAACAAACAAAACCCTTT+CGG 0.444701 7:+75806391 None:intergenic
TGCAGCGGCGGTGGCGCCGT+TGG 0.446555 7:-75806560 MsG0780040312.01.T01:CDS
AGCGGCGGTGGCGCCGTTGG+TGG 0.447724 7:-75806557 MsG0780040312.01.T01:CDS
CATTGTCAAAAGGCGATAGA+TGG 0.450280 7:-75806298 MsG0780040312.01.T01:CDS
TACCATAAGTCCAACCGTAA+TGG 0.451057 7:-75805864 MsG0780040312.01.T01:CDS
AACTGCGTCCTCTGACTCAA+TGG 0.452172 7:+75806193 None:intergenic
TGGAGCCGCACCTTATCATT+AGG 0.453562 7:-75805747 None:intergenic
ACGGCGTTGCTTGCTTCTCA+GGG 0.455862 7:-75805998 MsG0780040312.01.T01:CDS
ACATCAACCGGAGCCTAAAC+CGG 0.455977 7:-75807139 MsG0780040312.01.T01:CDS
TTCGCAGTACGGTGAAATTG+AGG 0.458512 7:-75806758 MsG0780040312.01.T01:CDS
CACCGGCAGGACCAGTAGCC+GGG 0.459411 7:-75806099 MsG0780040312.01.T01:CDS
TAGGATGACGGCGTGTCAGC+TGG 0.462425 7:-75806617 MsG0780040312.01.T01:CDS
TTGGATGCACAGAAGCTGTT+TGG 0.465368 7:-75806478 MsG0780040312.01.T01:CDS
ACCAGTAGCCGGGTACAATC+AGG 0.465958 7:-75806089 MsG0780040312.01.T01:CDS
TCCGAACCAGCAGCTTGGAC+AGG 0.467127 7:-75805795 MsG0780040312.01.T01:CDS
GCTGACTCCTGCACTTGGAC+AGG 0.467520 7:-75806026 MsG0780040312.01.T01:CDS
TTTCAGAGACATGATAATGT+TGG 0.468367 7:-75806172 MsG0780040312.01.T01:CDS
ACTGGTTCCGGTTTAGGCTC+CGG 0.468428 7:+75807132 None:intergenic
TGAATACGAAGAAGTTGAAG+AGG 0.469891 7:-75807046 MsG0780040312.01.T01:CDS
AACCTCTTCGTATTCTTCGC+CGG 0.474451 7:+75807080 None:intergenic
TGCTGTATCTTCGTCGGCTT+AGG 0.475165 7:+75806274 None:intergenic
TGCCCTTCAAACTCCTTATG+AGG 0.475217 7:+75806328 None:intergenic
AACCACCCTGTCCAAGCTGC+TGG 0.478162 7:+75805789 None:intergenic
GGACAGGGTGGTTCTGGAAG+AGG 0.478332 7:-75805779 MsG0780040312.01.T01:CDS
GCCGGTGCCATTAAGTGCCC+TGG 0.480370 7:+75806115 None:intergenic
GGAAGAGGAGGAAGAAGAGG+AGG 0.481424 7:-75807010 MsG0780040312.01.T01:CDS
GAGATCTGTTCTTTCGTGAA+AGG 0.483449 7:+75806925 None:intergenic
AGATTGAGGAAGGGCCGTTA+GGG 0.483939 7:-75806435 MsG0780040312.01.T01:CDS
CGCAGAAGAAGATTGGGAAT+AGG 0.485921 7:-75806636 MsG0780040312.01.T01:CDS
AGGAGCCGCAGAAGAAGATT+GGG 0.486295 7:-75806642 MsG0780040312.01.T01:CDS
GCACCGGCAGGACCAGTAGC+CGG 0.489590 7:-75806100 MsG0780040312.01.T01:CDS
CTTTGTTCATGGTTTGGGAT+GGG 0.490151 7:-75806812 MsG0780040312.01.T01:CDS
ACATGTTGCTGCTGCTGCTG+TGG 0.492062 7:+75806247 None:intergenic
ACCACCGGAGTTTGCTGCAC+CGG 0.492519 7:+75806583 None:intergenic
TGGAGCGAGGAATGCGTTGA+AGG 0.493923 7:-75806662 MsG0780040312.01.T01:CDS
CTGCAACCCACCTAATGATA+AGG 0.494595 7:+75805737 None:intergenic
CTGTTACGGATAAGGTTTCA+GGG 0.495047 7:-75806726 MsG0780040312.01.T01:CDS
GAGTGCTGAGAGTGCGAGAA+GGG 0.496400 7:-75806362 MsG0780040312.01.T01:CDS
TCCGAACCCGGCACCACCAA+CGG 0.496535 7:+75806544 None:intergenic
GGCGTTGGAGGAGCCTCATA+AGG 0.501894 7:-75806341 MsG0780040312.01.T01:CDS
AACTCCGGTGGTTGCAGCGG+CGG 0.502632 7:-75806572 MsG0780040312.01.T01:CDS
CCAAGTGCAGGAGTCAGCGC+AGG 0.503004 7:+75806031 None:intergenic
CTCGAGTCTTCTTTGCGAAG+CGG 0.510082 7:-75806905 MsG0780040312.01.T01:CDS
GCAAGTAGTGCGGTTACTCC+TGG 0.510390 7:-75805935 MsG0780040312.01.T01:CDS
AGTAGAGGAGGAGGAAGAGG+AGG 0.510787 7:-75807022 MsG0780040312.01.T01:CDS
TCTTTGTTCATGGTTTGGGA+TGG 0.520829 7:-75806813 MsG0780040312.01.T01:CDS
GAGCCTCATAAGGAGTTTGA+AGG 0.521276 7:-75806331 MsG0780040312.01.T01:CDS
AGTGTTGCAGTTAGCCAACC+AGG 0.521765 7:-75806133 MsG0780040312.01.T01:CDS
GCCACCGCCGCTGCAACCAC+CGG 0.522847 7:+75806568 None:intergenic
TACCCGGCTACTGGTCCTGC+CGG 0.522880 7:+75806097 None:intergenic
AGAAGTTGAAGAGGAAGTAG+AGG 0.522907 7:-75807037 MsG0780040312.01.T01:CDS
TTAGGGCTTGATAAGGTGAC+GGG 0.523648 7:-75806418 MsG0780040312.01.T01:CDS
CCATATGCTCCCATTACGGT+TGG 0.527958 7:+75805854 None:intergenic
GGGAATGCTGTACCACAGGC+TGG 0.528806 7:-75805833 MsG0780040312.01.T01:CDS
ATATGGGAATGCTGTACCAC+AGG 0.530348 7:-75805837 MsG0780040312.01.T01:CDS
AGATTTGGAGAGATTGAGGA+AGG 0.531982 7:-75806445 MsG0780040312.01.T01:CDS
TTAAGAGAAGGAGTGGAGCG+AGG 0.532777 7:-75806675 MsG0780040312.01.T01:CDS
GTCAGCGCCTGTCCAAGTGC+AGG 0.536502 7:+75806019 None:intergenic
AGTTGAAGAGGAAGTAGAGG+AGG 0.538751 7:-75807034 MsG0780040312.01.T01:CDS
TCAGCTGGCGTCTATTGGAC+CGG 0.541287 7:-75806602 MsG0780040312.01.T01:CDS
GGCTGATGCTGTATCTTCGT+CGG 0.547847 7:+75806268 None:intergenic
CTTCTCAGGGTGCTACGTTG+GGG 0.551142 7:-75805985 MsG0780040312.01.T01:CDS
CTATATCCGAACCAGCAGCT+TGG 0.552206 7:-75805800 MsG0780040312.01.T01:CDS
GATAATGTTGGATTTATTGG+TGG 0.553110 7:-75806160 MsG0780040312.01.T01:CDS
ACCAGGGCACTTAATGGCAC+CGG 0.554712 7:-75806116 MsG0780040312.01.T01:CDS
AGCATCGTGATGTTGCGGAT+CGG 0.555477 7:-75806876 MsG0780040312.01.T01:CDS
TGCACTTGGACAGGCGCTGA+CGG 0.557391 7:-75806017 MsG0780040312.01.T01:CDS
CAACCGTAATGGGAGCATAT+GGG 0.558624 7:-75805853 MsG0780040312.01.T01:CDS
TGACCAGCAGCAGGAACACC+AGG 0.559224 7:+75805917 None:intergenic
ATTACGGTTGGACTTATGGT+AGG 0.559596 7:+75805866 None:intergenic
AGGTGACGGGGAAGCCGAAA+GGG 0.560837 7:-75806405 MsG0780040312.01.T01:CDS
GACAGGGTGGTTCTGGAAGA+GGG 0.561765 7:-75805778 MsG0780040312.01.T01:CDS
CCGAACCAGCAGCTTGGACA+GGG 0.561837 7:-75805794 MsG0780040312.01.T01:CDS
TGAACTCCATGACCAGCAGC+AGG 0.562412 7:+75805908 None:intergenic
GCAAACTCCGGTGGTTGCAG+CGG 0.562765 7:-75806575 MsG0780040312.01.T01:CDS
TGGGGCTGGGTAATTTATTG+GGG 0.570569 7:-75805967 MsG0780040312.01.T01:CDS
GGGCACTTAATGGCACCGGC+AGG 0.570589 7:-75806112 MsG0780040312.01.T01:CDS
TGAGAGTGCGAGAAGGGCGT+TGG 0.571048 7:-75806356 MsG0780040312.01.T01:CDS
AAGGTTTCAGGGAAATCTAA+GGG 0.574831 7:-75806715 MsG0780040312.01.T01:CDS
AGGGCCGTTAGGGCTTGATA+AGG 0.575128 7:-75806425 MsG0780040312.01.T01:CDS
CGGATTCGGAAGATTGCTGA+TGG 0.577731 7:-75806856 MsG0780040312.01.T01:CDS
TTCGAAGCATCGTGATGTTG+CGG 0.584207 7:-75806881 MsG0780040312.01.T01:CDS
CTATTCCCAATCTTCTTCTG+CGG 0.584260 7:+75806637 None:intergenic
AAGGTGACGGGGAAGCCGAA+AGG 0.589222 7:-75806406 MsG0780040312.01.T01:CDS
TGGACCGGTGCAGCAAACTC+CGG 0.593968 7:-75806587 MsG0780040312.01.T01:CDS
TCCGGTTGATGTTGTTTGAG+CGG 0.597080 7:+75807150 None:intergenic
AATTGAATCCATTGAGTCAG+AGG 0.601117 7:-75806201 MsG0780040312.01.T01:CDS
GTGCCATTAAGTGCCCTGGT+TGG 0.602768 7:+75806119 None:intergenic
GTCACCTTATCAAGCCCTAA+CGG 0.606914 7:+75806421 None:intergenic
GGTTCTAGAAGCTTCTGGAT+CGG 0.609830 7:+75806946 None:intergenic
GAACCGGAACCATACATCCC+CGG 0.613066 7:-75807099 MsG0780040312.01.T01:CDS
AGAGTGCTGAGAGTGCGAGA+AGG 0.617840 7:-75806363 MsG0780040312.01.T01:CDS
TCTGGAAGAGGGCAATATGG+TGG 0.618817 7:-75805767 MsG0780040312.01.T01:CDS
AGCCTCATAAGGAGTTTGAA+GGG 0.619966 7:-75806330 MsG0780040312.01.T01:CDS
GTTAGGGCTTGATAAGGTGA+CGG 0.622365 7:-75806419 MsG0780040312.01.T01:CDS
GAAGATTGGGAATAGGATGA+CGG 0.630207 7:-75806629 MsG0780040312.01.T01:CDS
GATTTGGAGAGATTGAGGAA+GGG 0.631574 7:-75806444 MsG0780040312.01.T01:CDS
CAAGTGCAGGAGTCAGCGCA+GGG 0.639276 7:+75806032 None:intergenic
CTAGTGCTTCTGCTGCACAG+GGG 0.639520 7:-75806060 MsG0780040312.01.T01:CDS
ACCGGTGCAGCAAACTCCGG+TGG 0.641008 7:-75806584 MsG0780040312.01.T01:CDS
AGCAGCCGCCTGATTGTACC+CGG 0.651045 7:+75806081 None:intergenic
GGTTGATGTTGTTTGAGCGG+TGG 0.655449 7:+75807153 None:intergenic
AACCAGCAGCTTGGACAGGG+TGG 0.658678 7:-75805791 MsG0780040312.01.T01:CDS
CTCTGCGTATACTCCGAACC+CGG 0.663773 7:+75806532 None:intergenic
ACCCACCTAATGATAAGGTG+CGG 0.671031 7:+75805742 None:intergenic
AGTAGCCGGGTACAATCAGG+CGG 0.672302 7:-75806086 MsG0780040312.01.T01:CDS
AGCACCTGCAATCCAGCCTG+TGG 0.672524 7:+75805821 None:intergenic
GTGTTGCAGTTAGCCAACCA+GGG 0.679785 7:-75806132 MsG0780040312.01.T01:CDS
CCTCTTCGTATTCTTCGCCG+GGG 0.698350 7:+75807082 None:intergenic
GAGTCTTGGAGCAAGTAGTG+CGG 0.701572 7:-75805945 MsG0780040312.01.T01:CDS
GCTGGTCATGGAGTTCAGAG+TGG 0.717482 7:-75805902 MsG0780040312.01.T01:CDS
CCCCGGCGAAGAATACGAAG+AGG 0.718090 7:-75807082 MsG0780040312.01.T01:CDS
TAGGGCTTGATAAGGTGACG+GGG 0.738245 7:-75806417 MsG0780040312.01.T01:CDS
CGGGTTCGGAGTATACGCAG+AGG 0.748307 7:-75806531 MsG0780040312.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATTTATATTAGTAATGT+TGG - Chr7:75806438-75806457 MsG0780040312.01.T01:CDS 15.0%
!!! ATGAACAAAGATTTTTCTAT+GGG + Chr7:75806124-75806143 None:intergenic 20.0%
!!! GATTTATTTTGTTTAAGAGA+AGG - Chr7:75806259-75806278 MsG0780040312.01.T01:CDS 20.0%
! AAAAATCTTTGTTCATGGTT+TGG - Chr7:75806128-75806147 MsG0780040312.01.T01:CDS 25.0%
! AAAATCTTTGTTCATGGTTT+GGG - Chr7:75806129-75806148 MsG0780040312.01.T01:CDS 25.0%
! CATAGAAAAATCTTTGTTCA+TGG - Chr7:75806123-75806142 MsG0780040312.01.T01:CDS 25.0%
!! CATGAACAAAGATTTTTCTA+TGG + Chr7:75806125-75806144 None:intergenic 25.0%
!! CATGATAATGTTGGATTTAT+TGG - Chr7:75806783-75806802 MsG0780040312.01.T01:CDS 25.0%
!!! TTTGGTTTTTTTTCGAGATT+TGG - Chr7:75806486-75806505 MsG0780040312.01.T01:CDS 25.0%
ACAAACAAACAAAACCCTTT+CGG + Chr7:75806558-75806577 None:intergenic 30.0%
GATAATGTTGGATTTATTGG+TGG - Chr7:75806786-75806805 MsG0780040312.01.T01:CDS 30.0%
! GCATATTTTGCATTGTCAAA+AGG - Chr7:75806638-75806657 MsG0780040312.01.T01:CDS 30.0%
! TTTCAGAGACATGATAATGT+TGG - Chr7:75806774-75806793 MsG0780040312.01.T01:CDS 30.0%
!! ATTTTGTTTAAGAGAAGGAG+TGG - Chr7:75806264-75806283 MsG0780040312.01.T01:CDS 30.0%
AAGGTTTCAGGGAAATCTAA+GGG - Chr7:75806231-75806250 MsG0780040312.01.T01:CDS 35.0%
AATTGAATCCATTGAGTCAG+AGG - Chr7:75806745-75806764 MsG0780040312.01.T01:CDS 35.0%
TAAGGTTTCAGGGAAATCTA+AGG - Chr7:75806230-75806249 MsG0780040312.01.T01:CDS 35.0%
TAGTAATGTTGGAGCTGATT+TGG - Chr7:75806449-75806468 MsG0780040312.01.T01:CDS 35.0%
TGAATACGAAGAAGTTGAAG+AGG - Chr7:75805900-75805919 MsG0780040312.01.T01:CDS 35.0%
TGAGGATTGTAAAGCTGTTA+CGG - Chr7:75806206-75806225 MsG0780040312.01.T01:CDS 35.0%
TTGTAAAGCTGTTACGGATA+AGG - Chr7:75806212-75806231 MsG0780040312.01.T01:CDS 35.0%
! TCTGACTCAATGGATTCAAT+TGG + Chr7:75806746-75806765 None:intergenic 35.0%
ACCATAAGTCCAACCGTAAT+GGG - Chr7:75807083-75807102 MsG0780040312.01.T01:CDS 40.0%
AGAAGTTGAAGAGGAAGTAG+AGG - Chr7:75805909-75805928 MsG0780040312.01.T01:CDS 40.0%
AGATTTGGAGAGATTGAGGA+AGG - Chr7:75806501-75806520 MsG0780040312.01.T01:CDS 40.0%
AGCCTCATAAGGAGTTTGAA+GGG - Chr7:75806616-75806635 MsG0780040312.01.T01:CDS 40.0%
ATTACGGTTGGACTTATGGT+AGG + Chr7:75807083-75807102 None:intergenic 40.0%
ATTCCCATATGCTCCCATTA+CGG + Chr7:75807099-75807118 None:intergenic 40.0%
CATTGTCAAAAGGCGATAGA+TGG - Chr7:75806648-75806667 MsG0780040312.01.T01:CDS 40.0%
CTATTCCCAATCTTCTTCTG+CGG + Chr7:75806312-75806331 None:intergenic 40.0%
CTGTTACGGATAAGGTTTCA+GGG - Chr7:75806220-75806239 MsG0780040312.01.T01:CDS 40.0%
GAAGATTGGGAATAGGATGA+CGG - Chr7:75806317-75806336 MsG0780040312.01.T01:CDS 40.0%
GAGATCTGTTCTTTCGTGAA+AGG + Chr7:75806024-75806043 None:intergenic 40.0%
GATTTGGAGAGATTGAGGAA+GGG - Chr7:75806502-75806521 MsG0780040312.01.T01:CDS 40.0%
GGTAATTTATTGGGGAGTCT+TGG - Chr7:75806987-75807006 MsG0780040312.01.T01:CDS 40.0%
TACCATAAGTCCAACCGTAA+TGG - Chr7:75807082-75807101 MsG0780040312.01.T01:CDS 40.0%
TCAGGGAAATCTAAGGGTTA+TGG - Chr7:75806237-75806256 MsG0780040312.01.T01:CDS 40.0%
TTCGAGATTTGGAGAGATTG+AGG - Chr7:75806497-75806516 MsG0780040312.01.T01:CDS 40.0%
TTGGGGCTGGGTAATTTATT+GGG - Chr7:75806978-75806997 MsG0780040312.01.T01:CDS 40.0%
! ATTAACGCGTTTTCGCAGTA+CGG - Chr7:75806177-75806196 MsG0780040312.01.T01:CDS 40.0%
! CTTTGTTCATGGTTTGGGAT+GGG - Chr7:75806134-75806153 MsG0780040312.01.T01:CDS 40.0%
! TCTTTGTTCATGGTTTGGGA+TGG - Chr7:75806133-75806152 MsG0780040312.01.T01:CDS 40.0%
!! TGAAAGGTTCTAGAAGCTTC+TGG + Chr7:75806008-75806027 None:intergenic 40.0%
AACCTCTTCGTATTCTTCGC+CGG + Chr7:75805869-75805888 None:intergenic 45.0%
ACCGCTCAAACAACATCAAC+CGG - Chr7:75805795-75805814 MsG0780040312.01.T01:CDS 45.0%
AGTTGAAGAGGAAGTAGAGG+AGG - Chr7:75805912-75805931 MsG0780040312.01.T01:CDS 45.0%
ATATGGGAATGCTGTACCAC+AGG - Chr7:75807109-75807128 MsG0780040312.01.T01:CDS 45.0%
CGCAGAAGAAGATTGGGAAT+AGG - Chr7:75806310-75806329 MsG0780040312.01.T01:CDS 45.0%
GAGCCTCATAAGGAGTTTGA+AGG - Chr7:75806615-75806634 MsG0780040312.01.T01:CDS 45.0%
GCTGTTACGGATAAGGTTTC+AGG - Chr7:75806219-75806238 MsG0780040312.01.T01:CDS 45.0%
GTCACCTTATCAAGCCCTAA+CGG + Chr7:75806528-75806547 None:intergenic 45.0%
GTTAGGGCTTGATAAGGTGA+CGG - Chr7:75806527-75806546 MsG0780040312.01.T01:CDS 45.0%
GTTGGGGCTGGGTAATTTAT+TGG - Chr7:75806977-75806996 MsG0780040312.01.T01:CDS 45.0%
TCCCATTACGGTTGGACTTA+TGG + Chr7:75807087-75807106 None:intergenic 45.0%
TGCCCTTCAAACTCCTTATG+AGG + Chr7:75806621-75806640 None:intergenic 45.0%
TGGGGCTGGGTAATTTATTG+GGG - Chr7:75806979-75806998 MsG0780040312.01.T01:CDS 45.0%
TTAGGGCTTGATAAGGTGAC+GGG - Chr7:75806528-75806547 MsG0780040312.01.T01:CDS 45.0%
TTCGCAGTACGGTGAAATTG+AGG - Chr7:75806188-75806207 MsG0780040312.01.T01:CDS 45.0%
TTGGATGCACAGAAGCTGTT+TGG - Chr7:75806468-75806487 MsG0780040312.01.T01:CDS 45.0%
! CAACCGTAATGGGAGCATAT+GGG - Chr7:75807093-75807112 MsG0780040312.01.T01:CDS 45.0%
! TCCGGTTGATGTTGTTTGAG+CGG + Chr7:75805799-75805818 None:intergenic 45.0%
!! GGTTCTAGAAGCTTCTGGAT+CGG + Chr7:75806003-75806022 None:intergenic 45.0%
!! TTCGAAGCATCGTGATGTTG+CGG - Chr7:75806065-75806084 MsG0780040312.01.T01:CDS 45.0%
AACTGCGTCCTCTGACTCAA+TGG + Chr7:75806756-75806775 None:intergenic 50.0%
AAGGAGCCGCAGAAGAAGAT+TGG - Chr7:75806303-75806322 MsG0780040312.01.T01:CDS 50.0%
ACATCAACCGGAGCCTAAAC+CGG - Chr7:75805807-75805826 MsG0780040312.01.T01:CDS 50.0%
ACCTCTTCGTATTCTTCGCC+GGG + Chr7:75805868-75805887 None:intergenic 50.0%
AGATTGAGGAAGGGCCGTTA+GGG - Chr7:75806511-75806530 MsG0780040312.01.T01:CDS 50.0%
AGCATCGTGATGTTGCGGAT+CGG - Chr7:75806070-75806089 MsG0780040312.01.T01:CDS 50.0%
AGGAGCCGCAGAAGAAGATT+GGG - Chr7:75806304-75806323 MsG0780040312.01.T01:CDS 50.0%
AGTGTTGCAGTTAGCCAACC+AGG - Chr7:75806813-75806832 MsG0780040312.01.T01:CDS 50.0%
CCATATGCTCCCATTACGGT+TGG + Chr7:75807095-75807114 None:intergenic 50.0%
CGGATTCGGAAGATTGCTGA+TGG - Chr7:75806090-75806109 MsG0780040312.01.T01:CDS 50.0%
CTATATCCGAACCAGCAGCT+TGG - Chr7:75807146-75807165 MsG0780040312.01.T01:CDS 50.0%
CTCGAGTCTTCTTTGCGAAG+CGG - Chr7:75806041-75806060 MsG0780040312.01.T01:CDS 50.0%
GAGTCTTGGAGCAAGTAGTG+CGG - Chr7:75807001-75807020 MsG0780040312.01.T01:CDS 50.0%
GGCTGATGCTGTATCTTCGT+CGG + Chr7:75806681-75806700 None:intergenic 50.0%
GTGATGTTGCGGATCGGATT+CGG - Chr7:75806076-75806095 MsG0780040312.01.T01:CDS 50.0%
GTGTTGCAGTTAGCCAACCA+GGG - Chr7:75806814-75806833 MsG0780040312.01.T01:CDS 50.0%
TAGGGCTTGATAAGGTGACG+GGG - Chr7:75806529-75806548 MsG0780040312.01.T01:CDS 50.0%
TATTCTTCGCCGGGGATGTA+TGG + Chr7:75805859-75805878 None:intergenic 50.0%
TCTGGAAGAGGGCAATATGG+TGG - Chr7:75807179-75807198 MsG0780040312.01.T01:CDS 50.0%
TGAAGAGGAAGTAGAGGAGG+AGG - Chr7:75805915-75805934 MsG0780040312.01.T01:CDS 50.0%
TTAAGAGAAGGAGTGGAGCG+AGG - Chr7:75806271-75806290 MsG0780040312.01.T01:CDS 50.0%
! CCAACCGTAATGGGAGCATA+TGG - Chr7:75807092-75807111 MsG0780040312.01.T01:CDS 50.0%
! GGTTGATGTTGTTTGAGCGG+TGG + Chr7:75805796-75805815 None:intergenic 50.0%
! TAGCCAACCAGGGCACTTAA+TGG - Chr7:75806824-75806843 MsG0780040312.01.T01:CDS 50.0%
!! GGTTCTGGAAGAGGGCAATA+TGG - Chr7:75807176-75807195 MsG0780040312.01.T01:CDS 50.0%
!! TGCTGTATCTTCGTCGGCTT+AGG + Chr7:75806675-75806694 None:intergenic 50.0%
ACATGTTGCTGCTGCTGCTG+TGG + Chr7:75806702-75806721 None:intergenic 55.0%
ACCAGTAGCCGGGTACAATC+AGG - Chr7:75806857-75806876 MsG0780040312.01.T01:CDS 55.0%
ACGGCGTTGCTTGCTTCTCA+GGG - Chr7:75806948-75806967 MsG0780040312.01.T01:CDS 55.0%
AGGGCCGTTAGGGCTTGATA+AGG - Chr7:75806521-75806540 MsG0780040312.01.T01:CDS 55.0%
AGTAGAGGAGGAGGAAGAGG+AGG - Chr7:75805924-75805943 MsG0780040312.01.T01:CDS 55.0%
AGTAGCCGGGTACAATCAGG+CGG - Chr7:75806860-75806879 MsG0780040312.01.T01:CDS 55.0%
CCTCTTCGTATTCTTCGCCG+GGG + Chr7:75805867-75805886 None:intergenic 55.0%
CTAGTGCTTCTGCTGCACAG+GGG - Chr7:75806886-75806905 MsG0780040312.01.T01:CDS 55.0%
CTCTGCGTATACTCCGAACC+CGG + Chr7:75806417-75806436 None:intergenic 55.0%
GAACCGGAACCATACATCCC+CGG - Chr7:75805847-75805866 MsG0780040312.01.T01:CDS 55.0%
GAGATTGAGGAAGGGCCGTT+AGG - Chr7:75806510-75806529 MsG0780040312.01.T01:CDS 55.0%
GCAAGTAGTGCGGTTACTCC+TGG - Chr7:75807011-75807030 MsG0780040312.01.T01:CDS 55.0%
GCTAGTGCTTCTGCTGCACA+GGG - Chr7:75806885-75806904 MsG0780040312.01.T01:CDS 55.0%
GCTGGTCATGGAGTTCAGAG+TGG - Chr7:75807044-75807063 MsG0780040312.01.T01:CDS 55.0%
GGAAGAGGAGGAAGAAGAGG+AGG - Chr7:75805936-75805955 MsG0780040312.01.T01:CDS 55.0%
GGAAGTAGAGGAGGAGGAAG+AGG - Chr7:75805921-75805940 MsG0780040312.01.T01:CDS 55.0%
GGAGGAAGAGGAGGAAGAAG+AGG - Chr7:75805933-75805952 MsG0780040312.01.T01:CDS 55.0%
GGGATGTATGGTTCCGGTTC+GGG + Chr7:75805847-75805866 None:intergenic 55.0%
GGGGATGTATGGTTCCGGTT+CGG + Chr7:75805848-75805867 None:intergenic 55.0%
TCAGCTGGCGTCTATTGGAC+CGG - Chr7:75806344-75806363 MsG0780040312.01.T01:CDS 55.0%
TGAACTCCATGACCAGCAGC+AGG + Chr7:75807041-75807060 None:intergenic 55.0%
TGCTAGTGCTTCTGCTGCAC+AGG - Chr7:75806884-75806903 MsG0780040312.01.T01:CDS 55.0%
TGGAGCGAGGAATGCGTTGA+AGG - Chr7:75806284-75806303 MsG0780040312.01.T01:CDS 55.0%
TGTACCACAGGCTGGATTGC+AGG - Chr7:75807121-75807140 MsG0780040312.01.T01:CDS 55.0%
! ACCAGGGCACTTAATGGCAC+CGG - Chr7:75806830-75806849 MsG0780040312.01.T01:CDS 55.0%
! ACTGGTTCCGGTTTAGGCTC+CGG + Chr7:75805817-75805836 None:intergenic 55.0%
! CTTCTCAGGGTGCTACGTTG+GGG - Chr7:75806961-75806980 MsG0780040312.01.T01:CDS 55.0%
! GCTTCTCAGGGTGCTACGTT+GGG - Chr7:75806960-75806979 MsG0780040312.01.T01:CDS 55.0%
! GTGCCATTAAGTGCCCTGGT+TGG + Chr7:75806830-75806849 None:intergenic 55.0%
! TGCTTCTCAGGGTGCTACGT+TGG - Chr7:75806959-75806978 MsG0780040312.01.T01:CDS 55.0%
!! AGAGTGCTGAGAGTGCGAGA+AGG - Chr7:75806583-75806602 MsG0780040312.01.T01:CDS 55.0%
!! GACAGGGTGGTTCTGGAAGA+GGG - Chr7:75807168-75807187 MsG0780040312.01.T01:CDS 55.0%
!! GAGTGCTGAGAGTGCGAGAA+GGG - Chr7:75806584-75806603 MsG0780040312.01.T01:CDS 55.0%
!! GTATGGTTCCGGTTCGGGTT+CGG + Chr7:75805842-75805861 None:intergenic 55.0%
!! TATGGTTCCGGTTCGGGTTC+GGG + Chr7:75805841-75805860 None:intergenic 55.0%
!! TCGGGTACTGGTTCCGGTTT+AGG + Chr7:75805823-75805842 None:intergenic 55.0%
AACCACCCTGTCCAAGCTGC+TGG + Chr7:75807160-75807179 None:intergenic 60.0%
AACCAGCAGCTTGGACAGGG+TGG - Chr7:75807155-75807174 MsG0780040312.01.T01:CDS 60.0%
ACCAGTACCCGAACCCGAAC+CGG - Chr7:75805831-75805850 MsG0780040312.01.T01:CDS 60.0%
ACTCCTGGTGTTCCTGCTGC+TGG - Chr7:75807026-75807045 MsG0780040312.01.T01:CDS 60.0%
AGCACCTGCAATCCAGCCTG+TGG + Chr7:75807128-75807147 None:intergenic 60.0%
AGCAGCCGCCTGATTGTACC+CGG + Chr7:75806868-75806887 None:intergenic 60.0%
CAAGTGCAGGAGTCAGCGCA+GGG + Chr7:75806917-75806936 None:intergenic 60.0%
CAGCTTGGACAGGGTGGTTC+TGG - Chr7:75807161-75807180 MsG0780040312.01.T01:CDS 60.0%
CCCCGGCGAAGAATACGAAG+AGG - Chr7:75805864-75805883 MsG0780040312.01.T01:CDS 60.0%
CCGAACCAGCAGCTTGGACA+GGG - Chr7:75807152-75807171 MsG0780040312.01.T01:CDS 60.0%
CGGGTTCGGAGTATACGCAG+AGG - Chr7:75806415-75806434 MsG0780040312.01.T01:CDS 60.0%
GACGGCGTTGCTTGCTTCTC+AGG - Chr7:75806947-75806966 MsG0780040312.01.T01:CDS 60.0%
GCAAACTCCGGTGGTTGCAG+CGG - Chr7:75806371-75806390 MsG0780040312.01.T01:CDS 60.0%
GCCTGATTGTACCCGGCTAC+TGG + Chr7:75806861-75806880 None:intergenic 60.0%
GCGTGTCAGCTGGCGTCTAT+TGG - Chr7:75806339-75806358 MsG0780040312.01.T01:CDS 60.0%
GGGAATGCTGTACCACAGGC+TGG - Chr7:75807113-75807132 MsG0780040312.01.T01:CDS 60.0%
GGTGTTCCTGCTGCTGGTCA+TGG - Chr7:75807032-75807051 MsG0780040312.01.T01:CDS 60.0%
TCCGAACCAGCAGCTTGGAC+AGG - Chr7:75807151-75807170 MsG0780040312.01.T01:CDS 60.0%
TCGCCGGGGATGTATGGTTC+CGG + Chr7:75805853-75805872 None:intergenic 60.0%
TGACCAGCAGCAGGAACACC+AGG + Chr7:75807032-75807051 None:intergenic 60.0%
TGGACCGGTGCAGCAAACTC+CGG - Chr7:75806359-75806378 MsG0780040312.01.T01:CDS 60.0%
! CCCTGTCCAAGCTGCTGGTT+CGG + Chr7:75807155-75807174 None:intergenic 60.0%
! GCTGACTCCTGCACTTGGAC+AGG - Chr7:75806920-75806939 MsG0780040312.01.T01:CDS 60.0%
! GGCGTTGGAGGAGCCTCATA+AGG - Chr7:75806605-75806624 MsG0780040312.01.T01:CDS 60.0%
! TAGGATGACGGCGTGTCAGC+TGG - Chr7:75806329-75806348 MsG0780040312.01.T01:CDS 60.0%
! TGAGAGTGCGAGAAGGGCGT+TGG - Chr7:75806590-75806609 MsG0780040312.01.T01:CDS 60.0%
!! AAGGTGACGGGGAAGCCGAA+AGG - Chr7:75806540-75806559 MsG0780040312.01.T01:CDS 60.0%
!! ACCACCGGAGTTTGCTGCAC+CGG + Chr7:75806366-75806385 None:intergenic 60.0%
!! AGGTGACGGGGAAGCCGAAA+GGG - Chr7:75806541-75806560 MsG0780040312.01.T01:CDS 60.0%
!! GGACAGGGTGGTTCTGGAAG+AGG - Chr7:75807167-75807186 MsG0780040312.01.T01:CDS 60.0%
!! TCGGGTTCGGGTACTGGTTC+CGG + Chr7:75805829-75805848 None:intergenic 60.0%
!! TGCACTTGGACAGGCGCTGA+CGG - Chr7:75806929-75806948 MsG0780040312.01.T01:CDS 60.0%
AACTCCGGTGGTTGCAGCGG+CGG - Chr7:75806374-75806393 MsG0780040312.01.T01:CDS 65.0%
ACCGGTGCAGCAAACTCCGG+TGG - Chr7:75806362-75806381 MsG0780040312.01.T01:CDS 65.0%
CCAAGTGCAGGAGTCAGCGC+AGG + Chr7:75806918-75806937 None:intergenic 65.0%
GTCAGCGCCTGTCCAAGTGC+AGG + Chr7:75806930-75806949 None:intergenic 65.0%
TACCCGGCTACTGGTCCTGC+CGG + Chr7:75806852-75806871 None:intergenic 65.0%
TCCGAACCCGGCACCACCAA+CGG + Chr7:75806405-75806424 None:intergenic 65.0%
! CAGGGTGCTACGTTGGGGCT+GGG - Chr7:75806966-75806985 MsG0780040312.01.T01:CDS 65.0%
! TCAGGGTGCTACGTTGGGGC+TGG - Chr7:75806965-75806984 MsG0780040312.01.T01:CDS 65.0%
!! CCTGCGCTGACTCCTGCACT+TGG - Chr7:75806915-75806934 MsG0780040312.01.T01:CDS 65.0%
!! GAGTGCGAGAAGGGCGTTGG+AGG - Chr7:75806593-75806612 MsG0780040312.01.T01:CDS 65.0%
!! GCCGGTGCCATTAAGTGCCC+TGG + Chr7:75806834-75806853 None:intergenic 65.0%
!! GGGCACTTAATGGCACCGGC+AGG - Chr7:75806834-75806853 MsG0780040312.01.T01:CDS 65.0%
!! TCCGGTTCGGGTTCGGGTAC+TGG + Chr7:75805835-75805854 None:intergenic 65.0%
CACCGGCAGGACCAGTAGCC+GGG - Chr7:75806847-75806866 MsG0780040312.01.T01:CDS 70.0%
! GCACCGGCAGGACCAGTAGC+CGG - Chr7:75806846-75806865 MsG0780040312.01.T01:CDS 70.0%
!! GCCGTTGGTGGTGCCGGGTT+CGG - Chr7:75806401-75806420 MsG0780040312.01.T01:CDS 70.0%
GCCACCGCCGCTGCAACCAC+CGG + Chr7:75806381-75806400 None:intergenic 75.0%
TCCGGTGGTTGCAGCGGCGG+TGG - Chr7:75806377-75806396 MsG0780040312.01.T01:CDS 75.0%
!! GGTGGCGCCGTTGGTGGTGC+CGG - Chr7:75806395-75806414 MsG0780040312.01.T01:CDS 75.0%
!! GTGGCGCCGTTGGTGGTGCC+GGG - Chr7:75806396-75806415 MsG0780040312.01.T01:CDS 75.0%
! AGCGGCGGTGGCGCCGTTGG+TGG - Chr7:75806389-75806408 MsG0780040312.01.T01:CDS 80.0%
! TGCAGCGGCGGTGGCGCCGT+TGG - Chr7:75806386-75806405 MsG0780040312.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 75805748 75807220 75805748 ID=MsG0780040312.01;Name=MsG0780040312.01
Chr7 mRNA 75805748 75807220 75805748 ID=MsG0780040312.01.T01;Parent=MsG0780040312.01;Name=MsG0780040312.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|490
Chr7 exon 75805748 75807220 75805748 ID=MsG0780040312.01.T01:exon:14507;Parent=MsG0780040312.01.T01
Chr7 CDS 75805748 75807220 75805748 ID=MsG0780040312.01.T01:cds;Parent=MsG0780040312.01.T01
Gene Sequence

>MsG0780040312.01.T01

ATGGTGAGAAAGAGAAAACTCGTTAAAGCTTCTCAACAAGAAGAACCACCGCTCAAACAACATCAACCGGAGCCTAAACCGGAACCAGTACCCGAACCCGAACCGGAACCATACATCCCCGGCGAAGAATACGAAGAGGTTGAAGAAGAAGTTGAATACGAAGAAGTTGAAGAGGAAGTAGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGGAAGAAGAAGAACAACAAATTCAAGTAGAAGAAGACGATGAACCGATCCAGAAGCTTCTAGAACCTTTCACGAAAGAACAGATCTCGAGTCTTCTTTGCGAAGCGGCTTCGAAGCATCGTGATGTTGCGGATCGGATTCGGAAGATTGCTGATGGTGATGCTTCCCATAGAAAAATCTTTGTTCATGGTTTGGGATGGGATACTACTTCAGCAACGTTGATTAACGCGTTTTCGCAGTACGGTGAAATTGAGGATTGTAAAGCTGTTACGGATAAGGTTTCAGGGAAATCTAAGGGTTATGGATTTATTTTGTTTAAGAGAAGGAGTGGAGCGAGGAATGCGTTGAAGGAGCCGCAGAAGAAGATTGGGAATAGGATGACGGCGTGTCAGCTGGCGTCTATTGGACCGGTGCAGCAAACTCCGGTGGTTGCAGCGGCGGTGGCGCCGTTGGTGGTGCCGGGTTCGGAGTATACGCAGAGGAAGATTTATATTAGTAATGTTGGAGCTGATTTGGATGCACAGAAGCTGTTTGGTTTTTTTTCGAGATTTGGAGAGATTGAGGAAGGGCCGTTAGGGCTTGATAAGGTGACGGGGAAGCCGAAAGGGTTTTGTTTGTTTGTGTATAAGAGTGCTGAGAGTGCGAGAAGGGCGTTGGAGGAGCCTCATAAGGAGTTTGAAGGGCATATTTTGCATTGTCAAAAGGCGATAGATGGTCCTAAGCCGACGAAGATACAGCATCAGCCACAGCAGCAGCAGCAACATGTGAATTCAGTGAATCATTTGAACCAATTGAATCCATTGAGTCAGAGGACGCAGTTTCAGAGACATGATAATGTTGGATTTATTGGTGGAAGTAGTGTTGCAGTTAGCCAACCAGGGCACTTAATGGCACCGGCAGGACCAGTAGCCGGGTACAATCAGGCGGCTGCTAGTGCTTCTGCTGCACAGGGGCTGAACCCTGCGCTGACTCCTGCACTTGGACAGGCGCTGACGGCGTTGCTTGCTTCTCAGGGTGCTACGTTGGGGCTGGGTAATTTATTGGGGAGTCTTGGAGCAAGTAGTGCGGTTACTCCTGGTGTTCCTGCTGCTGGTCATGGAGTTCAGAGTGGATACAGTGCTCAGCCTACCATAAGTCCAACCGTAATGGGAGCATATGGGAATGCTGTACCACAGGCTGGATTGCAGGTGCTATATCCGAACCAGCAGCTTGGACAGGGTGGTTCTGGAAGAGGGCAATATGGTGGAGCCGCACCTTATCATTAG

Protein sequence

>MsG0780040312.01.T01

MVRKRKLVKASQQEEPPLKQHQPEPKPEPVPEPEPEPYIPGEEYEEVEEEVEYEEVEEEVEEEEEEEEEEEEEEQQIQVEEDDEPIQKLLEPFTKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGPVQQTPVVAAAVAPLVVPGSEYTQRKIYISNVGADLDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKPTKIQHQPQQQQQHVNSVNHLNQLNPLSQRTQFQRHDNVGFIGGSSVAVSQPGHLMAPAGPVAGYNQAAASASAAQGLNPALTPALGQALTALLASQGATLGLGNLLGSLGASSAVTPGVPAAGHGVQSGYSAQPTISPTVMGAYGNAVPQAGLQVLYPNQQLGQGGSGRGQYGGAAPYH*